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Alignment for radish unigene UN16043

               1      -     51
UN16043        --> ACGATTACGTAAGAGAATACTGAAACTTCTCTGACGAGACACAAGAACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898677       <-- ..................................................
EY931539       <-- ..................................................
FD563664       <-- ..................................................
EV551452       <-- ..................................................
FY453418       --> ACGATTACGTAAGAGAATACTGAAACTTCTCTGACGAGACACAAGAACAC
FD567321       --> ............................CTCTGACGAGACACAAGAACAC
EY894664       --> ..................................................
EY927476       --> ..................................................
FD943805       --> ..................................................

               51     -    101
UN16043        --> GTGAACTAGGCACAAACTAAACAAACTCCAACTTAAAAGGAT--------
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898677       <-- ..................AAACAAACTCCAACTTAAAAGGAT--------
EY931539       <-- ..................................................
FD563664       <-- ..................................................
EV551452       <-- ..................................................
FY453418       --> GTGAACTAGGCACAAACTAAACAAACTCCAACTTAAAAGGAT--------
FD567321       --> GTGAACTAGGCACAAACTAAACAAACTCCAACTTAAAAGGATAAAACCAG
EY894664       --> ..................AAACAAACTCCAACTTAAAAGGAT--------
EY927476       --> .............................ggtaaaaccagtT--------
FD943805       --> ............................ggatagaaccagtT--------

               101    -    151
UN16043        --> --CAAATCAATTATTTTGGGTATTATCTTGGACCCTTTTGAAACACGATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898677       <-- --CAAATCAATTATTTTGGGTATTATCTTGGACCCTTTTGAAACACGATA
EY931539       <-- ..................................................
FD563664       <-- ..................................................
EV551452       <-- ..................................................
FY453418       --> --CAAATCAATTATTTTGGGTATTATCTTGGACCCTTTTGAAACACGATA
FD567321       --> TTCAAATCAATTATTTTGGGTATTATCTTGGACCCTTTTGAAACACGATA
EY894664       --> --CAAATCAATTATTTTGGGTATTATCTTGGACCCTTTTGAAACACGATA
EY927476       --> --CAAATCAATTATTTTGGGTATTATCTTGGACCCTTTTGAAACACGATA
FD943805       --> --CAAATCAATTATTTTGGGTATTATCTTGGACCCTTTTGAAACACGATA

               151    -    201
UN16043        --> AAAGTCAACCCACAAATAGTGCTTACTTTATAAAATTGAACCTTGTGACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898677       <-- AAAGTCAACCCACAAATAGTGCTTACTTTATAAAATTGAACCTTGTGACA
EY931539       <-- ...........................................TGTGACA
FD563664       <-- ..................................................
EV551452       <-- ..................................................
FY453418       --> AAAGTCAACCCACAAATAGTGCTTACTTTATAAAATTGAACCTTGTGACA
FD567321       --> AAAGTCAACCCACAAATAGTGCTTACTTTATAAAATTGAACCTTGTGACA
EY894664       --> AAAGTCAACCCACAAATAGTGCTTACTTTATAAAATTGAACCTTGTGACA
EY927476       --> AAAGTCAACCCACAAATAGTGCTTACTTTATAAAATTGAACCTTGTGACA
FD943805       --> AAAGTCAACCCACAAATAGTGCTTACTTTATAAAATTGAACCTTGTGACA

               201    -    251
UN16043        --> AGAAGACGTAAGTGGTGGAACATTATT----TATAGTTAAATCCAGGATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898677       <-- AGAAGACGTAAGTGGTGGAACATTATT----TATAGTTAAATCCAGGATA
EY931539       <-- AGAAGACGTAAGTGGTGGAACATTATT----TATAGTTAAATCCAGGATA
FD563664       <-- ..................................................
EV551452       <-- ..................................................
FY453418       --> AGAAGACGTAAGTGGTGGAACATTATT----TATAGTTAAATCCAGGATA
FD567321       --> AGAAGACGTAAGTGGTGGAACATTATT----TATAGTTAAATCCAGGATA
EY894664       --> AGAAGACGTAAGTGGTGGAACATTATT----TATAGTTAAATCCAGGATA
EY927476       --> AGAAGACGTAAGTGGTGGAACATTATT----TATAGTTAAATCCAGGATA
FD943805       --> AGAAGACGTAAGTGGTGGAACATTATTAATTTATAGTTAAATCCAGGATA

               251    -    301
UN16043        --> AAAAAGTGAATTATTTATATGGACTCTGAAAGCCACAACCTCCGAGGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898677       <-- AAAAAGTGAATTATTTATATGGACTCTGAAAGCCACAACCTCCGAGGTTT
EY931539       <-- AAAAAGTGAATTATTTATATGGACTCTGAAAGCCACAACCTCCGAGGTGT
FD563664       <-- ..................................................
EV551452       <-- ..................................................
FY453418       --> ATAAAGTGAATTATTTATATGGACTCTGAAAGCCACAACCTCCGAGGTTT
FD567321       --> AAAAAGTGAATTATTTATATGGACTCTGAAAGCCACAACCTCCGAGGTTT
EY894664       --> AAAAAGTGAATTATTTATATGGACTCTGAAAGCCACAACCTCCGAGGTTT
EY927476       --> AAAAAGTGAATTATTTATATGGACTCTGAAAGCCACAACCTCCGAGGTTT
FD943805       --> AAAAAGTGAATTATTTATATGGACTCTGAAAGCCACAACCTCCGAGGTTT

               301    -    351
UN16043        --> GAACTTTGTAGATACACCAAAAGATTACTTGTGCCAGACGGCATAGCGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898677       <-- GAACTTTGTAGATACACCAAAAGATTACTTGTGCCAGACGGCATAGCGAT
EY931539       <-- GAACTTTGTAGATACACCAAAAGATTACTTGTGCCAGACGGCATAGCGAT
FD563664       <-- ..................................................
EV551452       <-- ..................................................
FY453418       --> GAACTTTGTAGATACACCAAAAGATTACTTGTGCCAGACGGCATAGCGAT
FD567321       --> GAACTTTGTAGATACACCAAAAGATTACTTGTGCCAGACGGCATAGCGAT
EY894664       --> GAACTTTGTAGATACACCAAAAGATTACTTGTGCCAGACGGCATAGCGAT
EY927476       --> GAACTTTGTAGATACACCAAAAGATTACTTGTGCCAGACGGCATAGCGAT
FD943805       --> GAACTTTGTAGATACACCAAAAGATTACTTGTGCCAGACGGCATAGCGAT

               351    -    401
UN16043        --> GGCCACTTGTTGCTAGAGTCCACTCTCTACCAGAAGGACACCAAGAGGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898677       <-- GGCCACTTGTTGCTAGAGTCCACTCTCCACCAGAAGGACACCAAGAGGCA
EY931539       <-- GGCCACTTGTTGCTAGAGTCCACTCTCTACCAGAAGGACACCAAGAGGCA
FD563664       <-- ..................................................
EV551452       <-- ..................................................
FY453418       --> GGCCACTTGTTGCTAGAGTCCACTCTCTACCAGAAGGACACCAAGAGGCA
FD567321       --> GGCCACTTGTTGCTAGAGTCCACTCTCTACCAAAAGGACACCAAGAGGCA
EY894664       --> GGCCACTTGTTGCTAGAGTCCACTCTCCACCAGAAGGACACCAAGAGGCA
EY927476       --> GGCCACTTGTTGCTAGAGTCCACTCTCTACCAGAAGGACACCAAGAGGCA
FD943805       --> GGCCACTTGTTGCTAGAGTCCACTCTCTACCAGAAGGACACCAAGAGGCA

               401    -    451
UN16043        --> TCTCCAAGCTTCATGCACAGTTTCTCACCAACAATGGCTGCGTATAGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898677       <-- TCTCCAAGCTTCATGCACAGTTTCTCACCAACAATGGCTGCGTATAGATT
EY931539       <-- TCTCCAAGCTTCATGCACAGTTTCTCACCAACAATGGCTGCGTATAGATT
FD563664       <-- ..................................................
EV551452       <-- ..................................................
FY453418       --> TCTCCAAGCTTCATGCACAGTTTCTCACCAACAATGGCTGCGTATAGATT
FD567321       --> TCTCCAAGCTTCATGCACAGTTTCTCACCAACAATGGCTGCGTATAGATT
EY894664       --> TCTCCAAGCTTCATGCACAGTTTCTCACCAACAATGGCTGCGTATAGATT
EY927476       --> TCTCCAAGCTTCATGCACAGTTTCTCACCAACAATGGCTGCGTATAGATT
FD943805       --> TCTCCAAGCTTCATGCACAGTTTCTCACCAACAATGGCTGCGTATAGATT

               451    -    501
UN16043        --> AGACTTTGCTTCCAAAACACGGATCTTTGACCTACTATGAATATCTTGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898677       <-- AGACTTTGCTTCCAAAACACGGATCTTTGACCTACTATGAATATCTTGTC  Raphanus raphanistrum subsp. maritimus
EY931539       <-- AGACTTTGCTTCCAAAACACGGATCGTTGACCTACTATGAATATCTTGTC  Raphanus sativus var. oleiformis
FD563664       <-- ..................................................  Raphanus sativus var. oleiformis
EV551452       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY453418       --> AGACTTTGCTTCCAAAACACGGATCTTTGACCTACTATGAATATCTTGTC  Raphanus sativus cv GSK3-1
FD567321       --> AAACTTTGCTTCCAAAACACGGATCGTTGACCTACTATGAATATCTTGTC  Raphanus sativus var. oleiformis
EY894664       --> AGACTTTGCTTCCAAAACACGGATCTTTGACCTACTATGAATATCTTGTC  Raphanus raphanistrum subsp. maritimus
EY927476       --> AGACTTTGCTTCCAAAACACGGATCGTTGACCTACTATGAATATCTTGTC  Raphanus sativus var. oleiformis
FD943805       --> AGACTTTGCTTCCAAAACACGGATCTTTGACCTACTATGAATATCTTGCC  Raphanus sativus cv Early Scarlet Globe

               501    -    551
UN16043        --> GCCTCCTAACGTCAATCAGTTTGACAATCTGGTCATGAATCGAGCTTCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898677       <-- GCCTCCTAACGTCAATCAGTTTGACAATCTGGTCATGAATCGAGCTTCCC
EY931539       <-- GCCTCCTAACGTCAATCAGTTTGACAATCTGGTCATGAATCGAGCTTCCC
FD563664       <-- ..................................................
EV551452       <-- ..................................................
FY453418       --> GCCTCCTAACGTCAATCAGTTTGACAATCTGGTCATGAATCGAGCTTCCC
FD567321       --> GCCTCCTAACGTCAATCAGTTTGACAATCTGGTCATGAATCGAGCTTCCC
EY894664       --> GCCTCCTAACGTCAATCAGTTTGACAATCTGGTCATGAATCGAGCTTCCC
EY927476       --> GCCTCCTAACGTCAATCAGTTTGACAATCTGGTCATGAATCGAGCTTCCC
FD943805       --> GCCTCCTAACGTCAATCAGTTTGACAATCTGGTCATGAATCGAGCTTCCC

               551    -    601
UN16043        --> CAATCGTAGAAGTGATCATAGAACACACATGGGATGCCAGGATGAGTAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898677       <-- CAATCGTAGAAGTGATCATAGAACACACATGGGATGCCAGGATGAGTAAG
EY931539       <-- CAATCGTAGAAGTGATCATAGAACACACATGGGATGCCAGGATGAGTAAG
FD563664       <-- ..................................................
EV551452       <-- ..................................................
FY453418       --> CAATCGTAGAAGTGATCATAGAACACACATGGGATGCCAGGATGAGTAAG
FD567321       --> CAATCGTAGAAGTGATCATAGAACACACATGGGATGCCAGGATGAGTAAG
EY894664       --> CAATCGTAGAAGTGATCATAGAACACACATGGGATGCCAGGATGAGTAAG
EY927476       --> CAATCGTAGAAGTGATCATAGAACACACATGGGATGCCAGGATGAGTAAG
FD943805       --> CAATCGTAGAAGTGATCATAGAACACACATGGGATGCCAGGATGAGTAAG

               601    -    651
UN16043        --> TATATATGCATAGCCCTCCATGATATGGTGCGAAGGGAAAGGCCAGTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898677       <-- TATATATGCATAGCCCTCCATGATATGGTGTGAAGGGAAAGGCCGGTGAG  Raphanus raphanistrum subsp. maritimus
EY931539       <-- TATATATGCATAGCCCTCCATGATATGGTGCGAAGGGAAAGGCCAGTGAG  Raphanus sativus var. oleiformis
FD563664       <-- ..................................................  Raphanus sativus var. oleiformis
EV551452       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY453418       --> TATATATGCATAGCCCTCCATGATATGGTGTGAAGGGAAAGGCCAGTGAG  Raphanus sativus cv GSK3-1
FD567321       --> TATATATGCATAGCCCTCCATGATATGGTGCGAAGGGAAAGGCCAGTGAG  Raphanus sativus var. oleiformis
EY894664       --> TATATATGCATAGCCCTCCATGATATGGTGTGAAGGGAAAGGCCGGTGAG  Raphanus raphanistrum subsp. maritimus
EY927476       --> TATATATGCATAGCCCTCCATGATATGGTGCGAAGGGAAAGGCCAGTGAG  Raphanus sativus var. oleiformis
FD943805       --> TATATATGCATAGCCCTCCATAATATGGTGCGAAGGGAAAGGCCAGTGAG  Raphanus sativus cv Early Scarlet Globe

               651    -    701
UN16043        --> CCTGAGTAGAACCAGTGTCATGGTTATCAAGGAACGTGACAGCTCTTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898677       <-- CCTGc.............................................
EY931539       <-- CCTGAGTAGAACCAGTGTCATGGTTATCAAGGAACGTGACAGCTCTTGAA
FD563664       <-- ..................................................
EV551452       <-- ..................................................
FY453418       --> CCTGAGTAGAACCAGTGTCATGGTTATCAAGGAACGTGACAGCTCTTGAA
FD567321       --> CCTGAGTAGAA.......................................
EY894664       --> CCTGc.............................................
EY927476       --> CCTGAGTAGAA.......................................
FD943805       --> CCTGAGTAGAACCAGTGTCATGGTTATCAAGGAACGTGACAGCTCTTGAA

               701    -    751
UN16043        --> GGCCACCATCCCATTACTCCCGGTGGCTTACCTTGTGCATCACATAAACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898677       <-- ..................................................
EY931539       <-- GGCCACCATCCCATTACTCCCGGTGGCTTACCTTGTGCATCACACAAACG
FD563664       <-- ..................................................
EV551452       <-- ..................................................
FY453418       --> GGCCACCATCCCATTACTCCCGGTGGCTTACCTTGTGCATCACATAAACG
FD567321       --> ..................................................
EY894664       --> ..................................................
EY927476       --> ..................................................
FD943805       --> GGCCACCATCCCATTACTCCCGGTGGCTTACCTTGTGCATCACATAAACG

               751    -    801
UN16043        --> CCAATACTGACCCTTTACAGCTTCCTGTAGAATCCCTTTAGTAGTGAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898677       <-- ..................................................
EY931539       <-- CCAATACTGACCCTTTACAGCTTCCTGCAGAATCCCTTTAGTAGTGAAGT
FD563664       <-- ..................................................
EV551452       <-- ..................................................
FY453418       --> CCAATACTGACCCTTTACAGCTTCCTGTAGAATCCCTTTAGTAGTGAAGT
FD567321       --> ..................................................
EY894664       --> ..................................................
EY927476       --> ..................................................
FD943805       --> CCAATACTGACCCTTTACAGCTTCCTGTAGAATCCCTTTAGTAGTGAAGT

               801    -    851
UN16043        --> CAAATGCAGCTGAAAGCTGTCCCGTGGCATCTATCCAATTGATTATACGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898677       <-- ..................................................
EY931539       <-- CAAATGCAGCTGAAAGCTGTCCCGTGGCATCTATCC..............
FD563664       <-- ....................................AATTGATTATACGC
EV551452       <-- ..................................................
FY453418       --> CAAATGCAGCTGAAAGCTGTCCCGTGGCATCTATCCAATTGATTATACGC
FD567321       --> ..................................................
EY894664       --> ..................................................
EY927476       --> ..................................................
FD943805       --> CAAATGCAGCTGAA....................................

               851    -    901
UN16043        --> TGCCTATGACTATCTTGGTTATAGTCGAGGCCATGACCATTGTAGTGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898677       <-- ..................................................
EY931539       <-- ..................................................
FD563664       <-- TGCCTATGACTATCTTGGTTATAGTCAAGGCCATGACCATTGTAGTGCAA
EV551452       <-- ..................................................
FY453418       --> TGCCTATGACTATCTTGGTTATAGTCGAGGCCATGACCATTGT.......
FD567321       --> ..................................................
EY894664       --> ..................................................
EY927476       --> ..................................................
FD943805       --> ..................................................

               901    -    951
UN16043        --> GAGTCCCAACATTCTCCAACTGAGAATAAGGGTTTGGCTGCTCCTATGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898677       <-- ..................................................
EY931539       <-- ..................................................
FD563664       <-- GAGTCCCAACATTCTCCAACTGAGAACAAGGGTTTGGCTGCTCCTATGTA
EV551452       <-- ......CAACATTCTCCAACTGAGAATAACGGTTTGGCTGCTCCTATGTA
FY453418       --> ..................................................
FD567321       --> ..................................................
EY894664       --> ..................................................
EY927476       --> ..................................................
FD943805       --> ..................................................

               951    -   1001
UN16043        --> TTCCTTCACATACTGTGCTGAATATGCTCTAGCAAAGTCAAAACGGAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898677       <-- ..................................................
EY931539       <-- ..................................................
FD563664       <-- TTCCTTCACATACTGTG-TGAATA-GCTCTAGCAAAGTCAAAACGGAAGT
EV551452       <-- TTCCTTCACATACTGTGCTGAATATCCTCTAGCAAAGTCAAAACGGAAGT
FY453418       --> ..................................................
FD567321       --> ..................................................
EY894664       --> ..................................................
EY927476       --> ..................................................
FD943805       --> ..................................................

               1001   -   1051
UN16043        --> CTTGAAATCCAACGGTGTTGCGCAACCAACGAAGCCAACCGGTTATATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898677       <-- ..................................................
EY931539       <-- ..................................................
FD563664       <-- CTTGAAATCCAACGGTGTTGCGCAACCAACGAAGCCAACCGGTTATATCT
EV551452       <-- CCTGAAATCCAACGGTGTTGCGCAACCAACGAAGCCAACCGGTTATATCT
FY453418       --> ..................................................
FD567321       --> ..................................................
EY894664       --> ..................................................
EY927476       --> ..................................................
FD943805       --> ..................................................

               1051   -   1101
UN16043        --> TTCCTAACAAAGTGTTGAGTGTGATCAACATTTGGAACTCCATTGAAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898677       <-- ..................................................
EY931539       <-- ..................................................
FD563664       <-- TTCCTAACAAAGTGTTGAGTGTGATCAACATTTGGAACTCCATTGAAGTT
EV551452       <-- TTCCTAACAAAGTGTTGAGTGTGATCAACATTTGGAACTCCATTGAAGTT
FY453418       --> ..................................................
FD567321       --> ..................................................
EY894664       --> ..................................................
EY927476       --> ..................................................
FD943805       --> ..................................................

               1101   -   1151
UN16043        --> TTCTCCTGTGCTTCGGTTCCCCAGTCCTCCTGTACATGAAGTAACAGCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898677       <-- ..................................................
EY931539       <-- ..................................................
FD563664       <-- TTCTCCTGTGCTTCGGTTCCCCAGTCCTCCTGTACATGAAGTAACAGCGT
EV551452       <-- TTCTCCTGTGCTTCGGTTCCCCAGTCCTCCTGTACATGAAGTAACAGCGT
FY453418       --> ..................................................
FD567321       --> ..................................................
EY894664       --> ..................................................
EY927476       --> ..................................................
FD943805       --> ..................................................

               1151   -   1201
UN16043        --> GTTCATTCCAAGGCAGTGAGATCCCATCGTAGCGGTTATACATTCCACCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898677       <-- ..................................................
EY931539       <-- ..................................................
FD563664       <-- GTTCATTCCAAGGCAACGAGATCCCATCGTAGCGGTTATACATTCCACCG
EV551452       <-- GTTCATTCCAAGGCAGTGAGATCCCATCGTAGCGGTTATACATTCCACCA
FY453418       --> ..................................................
FD567321       --> ..................................................
EY894664       --> ..................................................
EY927476       --> ..................................................
FD943805       --> ..................................................

               1201   -   1251
UN16043        --> TGTCCTCTGGTAGTACCAACGCGATGGTTGATGACAATATCAGCCATAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898677       <-- ..................................................
EY931539       <-- ..................................................
FD563664       <-- TGTCCTCTGGTAGTACCAACGCGATGGTTGATGACAATATCAGCCATAGC
EV551452       <-- TGTCCTCTGGTAGTACCAACGCGATGGTTGATGACAATATCAGCCATAGC
FY453418       --> ..................................................
FD567321       --> ..................................................
EY894664       --> ..................................................
EY927476       --> ..................................................
FD943805       --> ..................................................

               1251   -   1301
UN16043        --> TCTAACTTTGTGCTGTTTCATCTTACGAAGCAGGGATTTCAACAGGTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898677       <-- ..................................................
EY931539       <-- ..................................................
FD563664       <-- TCTAACTTTGTGCTGTCTCATCTTAAGAAGCAAGGATTTCAACAGGTGCT
EV551452       <-- TCTAACTTTGTACTGTTTCATCTTACGAAGCAGGGATTTCAACAGGTGCT
FY453418       --> ..................................................
FD567321       --> ..................................................
EY894664       --> ..................................................
EY927476       --> ..................................................
FD943805       --> ..................................................

               1301   -   1351
UN16043        --> CGGAGCCGTATGCTGAGTTTAGTGAATAAAGGTCTTGTGGAAGGTAACCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898677       <-- ..................................................
EY931539       <-- ..................................................
FD563664       <-- CGGAGCCGTATGCTGAGTTTAGTGAATAAAGGTCTTGTGGAAGGTAACCT
EV551452       <-- CGGAGCCGTATGCTGAGTTTAGTGAATAAAGGTCTTGTGGAAGGTAACCT
FY453418       --> ..................................................
FD567321       --> ..................................................
EY894664       --> ..................................................
EY927476       --> ..................................................
FD943805       --> ..................................................

               1351   -   1401
UN16043        --> TCTGGTGCAAGGGACTGAGATGGTGGTGGTAGCCATGCAGAAGTGAAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898677       <-- ..................................................
EY931539       <-- ..................................................
FD563664       <-- TCTGGTGCAAGGGACTGAGATGGTGGTGGTAGCCATGCAGAAGTGAAGCC
EV551452       <-- TCTGGTGCAAGAGACTGAGATGGTGGTGGTAGCCATGCAGAAGTGAAGCC
FY453418       --> ..................................................
FD567321       --> ..................................................
EY894664       --> ..................................................
EY927476       --> ..................................................
FD943805       --> ..................................................

               1401   -   1451
UN16043        --> TGATTTTGCGATGTCTTGAACTTTTGCGTCCAAGTTTCTGTACCAGTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898677       <-- ..................................................
EY931539       <-- ..................................................
FD563664       <-- TGATTTTGCGATGTCGAAAACTTTTGCGTCCAAGTTTCTGTACCAGTCAT
EV551452       <-- CGATTTTGAGATGTCTTGAACTTTTGCGTCCAAGTTTCTGTACCAGTCAT
FY453418       --> ..................................................
FD567321       --> ..................................................
EY894664       --> ..................................................
EY927476       --> ..................................................
FD943805       --> ..................................................

               1451   -   1501
UN16043        --> GTTTATGGGACTCCCAGTTATAAGCCTGGAGAATGACTTCCCTTCCATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898677       <-- ..................................................
EY931539       <-- ..................................................
FD563664       <-- GTTTATGGGACTCCCAGTTATAAGCCTGGAGAATGACTTCCCTTCCATCA
EV551452       <-- GTTTATGGGACTCCCAGTTATAAGCCTGGAGAATGACTTCCCTTCCATCA
FY453418       --> ..................................................
FD567321       --> ..................................................
EY894664       --> ..................................................
EY927476       --> ..................................................
FD943805       --> ..................................................

               1501   -   1551
UN16043        --> CGCATAACCGCACCGATATCAGTTTGGTCATTGCATCCATCAAAAACATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898677       <-- ..................................................
EY931539       <-- ..................................................
FD563664       <-- CGCATAACCGCACCGATATCAGTTTGGTCATTGCATCCATCAAAAACATT
EV551452       <-- CGCATAACAGCACCGATATCAGTTTGGTCATTGCATCCATCAAAAACATT
FY453418       --> ..................................................
FD567321       --> ..................................................
EY894664       --> ..................................................
EY927476       --> ..................................................
FD943805       --> ..................................................

               1551   -   1601
UN16043        --> GTTATAGTAGCCCATGTTGAAACACTGATTGGCGCAACAATGAGATCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898677       <-- ..................................................
EY931539       <-- ..................................................
FD563664       <-- GTTATAGTAGCCCATGTTGAAACACTGATTGGCGCAACAATGAGATCAAG
EV551452       <-- GTTATAGTAGCCCATGTTGAAACACTGATTGGCGCAACAATGAGATCAAG
FY453418       --> ..................................................
FD567321       --> ..................................................
EY894664       --> ..................................................
EY927476       --> ..................................................
FD943805       --> ..................................................

               1601   -   1651
UN16043        --> TTTAAAGAAGATCAAATATACCAAGGTGAAGAGAAGAAGCTACACAGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898677       <-- ..................................................
EY931539       <-- ..................................................
FD563664       <-- TTTAAAGAAGATCAAATATACCAAGGTGAAGAGAAGAAGCTACACAGCTG
EV551452       <-- TTTAAAGAAGATCAAATATACCAAGGTGAAGAGAAGAAGCTACACAGCTG
FY453418       --> ..................................................
FD567321       --> ..................................................
EY894664       --> ..................................................
EY927476       --> ..................................................
FD943805       --> ..................................................

               1651   -   1701
UN16043        --> CGTCTTCTTGGGATCC
                   ~~~~~~~~~~~~~~~~
EY898677       <-- ................
EY931539       <-- ................
FD563664       <-- CGTCcc..........
EV551452       <-- CGTCTTCTTGGGATCC
FY453418       --> ................
FD567321       --> ................
EY894664       --> ................
EY927476       --> ................
FD943805       --> ................