-4     -     46
UN16067        --> .....ATACTACACCTACACGCACGAGTGAAAAGGAGAGAGAAAGATGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540870       <-- ..................................................
FD538750       <-- ..................................................
EY901857       <-- ..................................................
EW737255       <-- ..................................................
EX908568       <-- ..................................................
FD968141       <-- ..................................................
EV536413       --> ggattATACTACACCTACACGCACGAGTGAAAAGGAGAGAGAAAGATGTT
FD542764       --> ...ggATACTACACCTACACGCACGAGTGAAAAGGAGAGAGAAAGATGTT
EX897295       --> ....ggatacACACCTACACGCACGAGTGAAAAGGAGAGAGAAAGATGTT
EX895005       --> ...............................gAGGAGAGAGAAAGATGTT
EW732572       --> ...................................gGAGAGAAAGATGTT
EY905414       --> ....................................ggGAGAAAGATGTT
FD972206       --> .............................................ATGCT
EX904719       --> ..................................................

               46     -     96
UN16067        --> TGCAGTAGAGAATGGGTTGCAGGGAGACCCAAGACTACAGGCCATCTCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540870       <-- ..................................................
FD538750       <-- ..................................................
EY901857       <-- ..................................................
EW737255       <-- ..................................................
EX908568       <-- ..................................................
FD968141       <-- ..................................................
EV536413       --> TGCAGTAGAGAATGGGTTGCAGGGAGACCCAAGACTACAGGCCATCTCCG
FD542764       --> TGCAGTAGAGAATGGGTTGCAGGGAGACCCAAGACTACAGGCCATCTCCG
EX897295       --> TGCAGTAGAGAATGGGTTGCAGGGAGACCCAAGACTACAGGCCATCTCCG
EX895005       --> TGCAGTAGAGAATGGGTTGCAGGGAGACCCAAGACTACAGGCCATCTCCG
EW732572       --> TGCAGTAGAGAATGGGTTGCAGGGAGACCCAAGACTACAGGCCATCTCCG
EY905414       --> TGCAGTAGAGAATGGGTTGCAGGGAGACCCAAGACTACAGGCCATCTCCG
FD972206       --> TGCAGTAGAGAATGGGTTGCAGGGAGACCCAAGACTACAGGCCATCTCCG
EX904719       --> ......gggGAATGGGTTGCAGGGAGACCCAAGACTACAGGCCATCTCCG

               96     -    146
UN16067        --> ACGCCATTCGAGTCATTCCTCACTTCCCCAAGACTGGAATCATGTTTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540870       <-- ...........................CCAAGACTGGAATCATGTTTCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538750       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901857       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW737255       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX908568       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD968141       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536413       --> ACGCCATTCGAGTCATTCCTCACTTCCCCAAGACTGGAATCATGTTTCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542764       --> ACGCCATTCGAGTCATTCCTCACTTCCCCAAGACTGGAATCATGTTTCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX897295       --> ACGCCATTCGAGTCATTCCTCACTTCCCAAAGACTGGAATCATGTTTCAA  Raphanus sativus cv Early Scarlet Globe
EX895005       --> ACGCCATTCGAGTCATTCCTCACTTCCCAAAGACTGGAATCATGTTTCAA  Raphanus sativus cv Early Scarlet Globe
EW732572       --> ACGCCATTCGAGTCATTCCTCACTTCCCAAAGACTGGAATCATGTTTCAA  Raphanus sativus cv Rat-Tail Radish #3870
EY905414       --> ACGCCATTCGAGTCATTCCTCACTTCCCCAAGACTGGAATCATGTTTCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972206       --> ACGCCATTCGAGTCATTCCTCACTTCCCCAAGACTGGAATCATGTTTCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX904719       --> ACGCCATTCGAGTCATTCCTCACTTCCCAAAGACTGGAATCATGTTTCAA  Raphanus sativus cv Rat-Tail Radish #3870

               146    -    196
UN16067        --> GACATAACGACGCTGTTGCTAGATCCAGTTGCCTTCAAACATGTCGTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540870       <-- GACATAACGACGCTGTTGCTAGATCCAGTTGCCTTCAAACATGTCGTTGA
FD538750       <-- ..................................................
EY901857       <-- ..................................................
EW737255       <-- ..................................................
EX908568       <-- ..................................................
FD968141       <-- ..................................................
EV536413       --> GACATAACGACGCTGTTGCTAGATCCAGTTGCCTTCAAACATGTCGTTGA
FD542764       --> GACATAACGACGCTGTTGCTAGATCCAGTTGCCTTCAAACATGTCGTTGA
EX897295       --> GACATAACGACGCTGTTGCTAGATCCAGTTGCCTTCAAACATGTCGTTGA
EX895005       --> GACATAACGACGCTGTTGCTAGATCCAGTTGCCTTCAAACATGTCGTTGA
EW732572       --> GACATAACGACGCTGTTGCTAGATCCAGTTGCCTTCAAACATGTCGTTGA
EY905414       --> GACATAACGACGCTGTTGCTAGATCCAGTTGCCTTCAAACATGTCGTTGA
FD972206       --> GACATAACGACGCTGTTGCTAGATCCAGTTGCCTTCAAACATGTCGTTGA
EX904719       --> GACATAACGACGCTGTTGCTAGATCCAGTTGCCTTCAAACATGTCGTTGA

               196    -    246
UN16067        --> TATCTTTGTAGATCGTTACAAGCACATGGACATCTCTCTCGTCGCCGGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540870       <-- TATCTTTGTAGATCGTTACAAGCACATGGACATCTCTCTCGTCGCCGGCG
FD538750       <-- ....TTTGTAGATCGTTACAAGCACATGGACATCTCTCTCGTCGCCGGCG
EY901857       <-- ........TAGATCGTTACAAGCACATGGACATCTCTCTCGTCGCCGGCG
EW737255       <-- ...........................................GCCGGCG
EX908568       <-- ...........................................GCCGGCG
FD968141       <-- ..................................................
EV536413       --> TATCTTTGTAGATCGTTACAAGCACATGGACATCTCTCTCGTCGCCGGCG
FD542764       --> TATCTTTGTAGATCGTTACAAGCACATGGACATCTCTCTCGTCGC-GGCG
EX897295       --> TATCTTTGTAGATCGTTACAAGCACATGGACATCTCTCTCGTCGCCGGCG
EX895005       --> TATCTTTGTAGATCGTTACAAGCACATGGACATCTCTCTCGTCGCCGGCG
EW732572       --> TATCTTTGTAGATCGTTACAAGCACATGGACATCTCTCTCGTCGCCGGCG
EY905414       --> TATCTTTGTAGATCGTTACAAGCACATGGACATCTCTCTCGTCGCCGGCG
FD972206       --> TATCTTTGTAGATCGTTACAAGCACATGGACATCTCTCTCGTCGCCGGCG
EX904719       --> TATCTTTGTAGATCGTTACAAGCACATGGACATCTCTCTCGTCGCCGGCG

               246    -    296
UN16067        --> TAGAGGCGAGAGGATTCATATTTGGACCTCCCATTGCATTAGCCATAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540870       <-- TAGAGGCGAGAGGATTCATATTTGGACCTCCCATTGCATTAGCCATAGGT
FD538750       <-- TAGAGGCGAGAGGATTCATATTTGGACCTCCCATTGCATTAGCCATAGGT
EY901857       <-- TAGAGGCGAGAGGATTCATATTTGGACCTCCCATTGCATTAGCCATAGGT
EW737255       <-- TAGAGGCGAGAGGATTCATATTTGGACCTCCCATTGCATTAGCCATAGGT
EX908568       <-- TAGAGGCGAGAGGATTCATATTTGGACCTCCCATTGCATTAGCCATAGGT
FD968141       <-- ..................................................
EV536413       --> TAGAGGCGAGAGGATTCATATTTGGACCTCCCATTGCATTAGCCATAGGT
FD542764       --> TAG...............................................
EX897295       --> TAGAGGCGAGAGGATTCATATTTGGACCTCCCATTGCATTAGCCATAGGT
EX895005       --> TAGAGGCGAGAGGATTCATATTTGGACCTCCCATTGCATTAGCCATAGGT
EW732572       --> TAGAGGCGAGAGGATTCATATTTGGACCTCCCATTGCATTAGCCATAGGT
EY905414       --> TAGAGGCGAGAGGATTCATATTTGGACCTCCCATTGCATTAGCCATAGGT
FD972206       --> TAGAGGCGAGAGGATTCATATTTGGACCTCCCGTTGCATTAGCCATAGGT
EX904719       --> TAGAGGCGAGAGGATTCATATTTGGACCTCCCATTGCATTAGCCATAGGT

               296    -    346
UN16067        --> GCTAAATTCATCCCTCTACGTAAACCAGGAAAATTACCCGGGAGAGTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540870       <-- GCTAAATTCATCCCTCTACGTAAACCAGGAAAATTACCCGGGAGAGTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538750       <-- GCTAAATTCATCCCTCTACGTAAACCAGGAAAATTACCCGGGAGAGTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901857       <-- GCTAAATTCATCCCTCTACGTAAACCAGGAAAATTACCCGGGAGAGTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW737255       <-- GCTAAATTCATCCCTCTACGTAAACCAGGAAAATTACCCGGGAAAGTGAT  Raphanus sativus cv Rat-Tail Radish #3870
EX908568       <-- GCTAAATTCATCCCTCTACGTAAACCAGGAAAATTACCCGGGAAAGTGAT  Raphanus sativus cv Rat-Tail Radish #3870
FD968141       <-- ........................CCAGGAAAATTACCCGGGAGAGTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536413       --> GCTAAATTCATCCCTCTACGTAAACCAGGAAAATTACCCGGGAGAGTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542764       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX897295       --> GCTAAATTCATCCCTCTACGTAAACCAGGAAAATTACCCGGGAAAGTGAT  Raphanus sativus cv Early Scarlet Globe
EX895005       --> GCTAAATTCATCCCTCTACGTAAACCAGGAAAATTACCCGGGAAAGTGAT  Raphanus sativus cv Early Scarlet Globe
EW732572       --> GCTAAATTCATCCCTCTACGTAAACCAGGAAAATTACCCGGGAAAGTGAT  Raphanus sativus cv Rat-Tail Radish #3870
EY905414       --> GCTAAATTCATCCCTCTACGTAAACCAGGAAAATTACCCGGGAGAGTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972206       --> GCTAAATTCATCCCTCTACGTAAACCAGGAAAATTACCCGGGAGAGTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX904719       --> GCTAAATTCATCCCTCTACGTAAACCAGGAAAATTACCCGGGAAAGTGAT  Raphanus sativus cv Rat-Tail Radish #3870

               346    -    396
UN16067        --> AAGCGAAGAATACGAGCTAGAGTATGGAAACGATCGTCTAGAGATGAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540870       <-- AAGCGAAGAATACGAGCTAGAGTATGGAAACGATCGTCTAGAGATGAGTA
FD538750       <-- AAGCGAAGAATACGAGCTAGAGTATGGAAACGATCGTCTAGAGATGAGTA
EY901857       <-- AAGCGAAGAATACGAGCTAGAGTATGGAAACGATCGTCTAGAGATGAGTA
EW737255       <-- AAGCGAAGAATACGAGATAGAGTATGGAAACGATCGTCTAGAGATGAGTA
EX908568       <-- AAGCGAAGAATACGAGCTAGAGTATGGAAACGATCGTCTAGAGATGAGTA
FD968141       <-- AAGCGAAGAATACGAGCTAGAGTATGGAAACGATCGTCTAGAGATGAGTA
EV536413       --> AAGCGAAGAATACGAGCTAGAGTATGGAAACGATCGTCTAGAGATGAGTA
FD542764       --> ..................................................
EX897295       --> AAGCGAAGAATACGAGCTAGAGTATGGAAACGATCGTCTAGAGATGAGTA
EX895005       --> AAGCGAAGAATACGAGCTAGAGTATGGAAACGATCGTCTAGAGATGAGTA
EW732572       --> AAGCGAAGAATACGAGATAGAGTATGGAAACGATCGTCTAGAGATGAGTA
EY905414       --> AAGCGAAGAATACGAGCTAGAGTATGGAAACGATCGTCTAGAGATGAGTA
FD972206       --> AAGCGAAGAATACGAGCTAGAGTATGGAAACGATCGTCTAGAGATGAGTA
EX904719       --> AAGCGAAGAATACGAGCTAGAGTATGGAAACGATCGTCTAGAGATGAGTA

               396    -    446
UN16067        --> TGGAGGCCGTTAAATCCCATGAAAGAGCTCTTGTCATCGACGATTTAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540870       <-- TGGAGGCCGTTAAATCCCATGAAAGAGCTCTTGTCATCGACGATTTAGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538750       <-- TGGAGGCCGTTAAATCCCATGAAAGAGCTCTTGTCATCGACGATTTAGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901857       <-- TGGAGGCCGTTAAATCCCATGAAAGAGCTCTTGTCATCGACGATTTAGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW737255       <-- TGGAGGCCGTTAAATCCCGTGAAAGAGCTCTTGTCATCGGCGATTTAGTT  Raphanus sativus cv Rat-Tail Radish #3870
EX908568       <-- TGGAGGCCGTTAAATCCCGTGAAAGAGCTCTTGTCATCGGCGATTTAGTT  Raphanus sativus cv Rat-Tail Radish #3870
FD968141       <-- TGGAGGCCGTTAAACCCCATGAAAGAGCTCTTGTCATCGACGATTTAGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536413       --> TGGAGGCCGTTAAATCCCATGAAAGAGCTCTTGTCATCGACGATTTAGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542764       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX897295       --> TGGAGGCCGTTAAATCCCGTGAAAGAGCTCTTGTCATCGGTGATTTAGTT  Raphanus sativus cv Early Scarlet Globe
EX895005       --> TGGAGGCCGTTAAATCCCGTGAAAGAGCTCTTGTCATCGGCGATTTAGTT  Raphanus sativus cv Early Scarlet Globe
EW732572       --> TGGAGGCCGTTAAATCCCGTGAAAGAGCTCTTGTCATCGGCGATTTAGTT  Raphanus sativus cv Rat-Tail Radish #3870
EY905414       --> TGGAGGCCGTTAAATCCCATGAAAGAGCTCTTGTCATCGACGATTTAGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972206       --> TGGAGGCCGTTAAACCCCATGAAAGAGCTCTTGTCATCGACGATTTAGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX904719       --> TGGAGGCCGTTAAATCCCGTGAAAGAGCTCTTGTCATCGGCGATTTAGTT  Raphanus sativus cv Rat-Tail Radish #3870

               446    -    496
UN16067        --> GCCACTGGTGGAACACTCTCGGCTTCCATTAACCTCTTGGAACGTGCTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540870       <-- GCCACTGGTGGAACACTCTCGGCTTCCATTAACCTCTTGGAACGTGCTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538750       <-- GCCACTGGTGGAACACTCTCGGCTTCCATTAACCTCTTGGAACGTGCTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901857       <-- GCCACTGGTGGAACACTCTCGGCTTCCATTAACCTCTTGGAACGTGCTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW737255       <-- GCCACTGGTGGAACACTTTCCGCTTCCATTAAACTCTTGGAACGTGCTGG  Raphanus sativus cv Rat-Tail Radish #3870
EX908568       <-- GCCACTGGTGGAACACTCTCCGCTTCCATTAAACTCTTGGAACGTGCTGG  Raphanus sativus cv Rat-Tail Radish #3870
FD968141       <-- GCCACTGGTGGAACACTTTCGGCTTCCATTAACCTCTTGGAACGTGCTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536413       --> GCCACTGGTGGAACACTCTCGGCTTCCATTAACCTCTTGGAACGTGCTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542764       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX897295       --> GCCACTGGTGGAACACTCTCCGCTTCCATTAAACTCTTGGAACGTGCTGG  Raphanus sativus cv Early Scarlet Globe
EX895005       --> GCCACTGGTGGAACACTCTCCGCTTCCATTAAACTCTTGGAACGTGCTGG  Raphanus sativus cv Early Scarlet Globe
EW732572       --> GCCACTGGTGGAACACTCTCCGCTTCCATTAAACTCTTGGAACGTGCTGG  Raphanus sativus cv Rat-Tail Radish #3870
EY905414       --> GCCACTGGTGGAACACTCTCGGCTTCCATTAACCTCTTGGAACGTGCTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972206       --> GCCACTGGTGGAACACTCTCGGCTTCCATTAACCTCTTGGAACGTGCTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX904719       --> GCCACTGGTGGAACACTCTCCGCTTCCATTAAACTCTTGGAACGTGCTGG  Raphanus sativus cv Rat-Tail Radish #3870

               496    -    546
UN16067        --> GGCCGAAGTTGTGGAATGTGCCTGCGTTGTTGGTTTGCCTAAATTCAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540870       <-- GGCCGAAGTTGTGGAATGTGCCTGCGTTGTTGGTTTGCCTAAATTCAAGG
FD538750       <-- GGCCGAAGTTGTGGAATGTGCCTGCGTTGTTGGTTTGCCTAAATTCAAGG
EY901857       <-- GGCCGAAGTTGTGGAATGTGCCTGCGTTGTTGGTTTGCCTAAATTCAAGG
EW737255       <-- GGCCGAAGTTGTGGAATGTGCCTGCGTTGTTGGTTTGCCTAAATTCAAGG
EX908568       <-- GGCCGAAGTTGTGGAATGTGCCTGCGTTGTTGGTTTGCCTAAATTCAAGG
FD968141       <-- GGCCGAAGTTGTGGAATGTGCCTGCGTTGTTGGTTTGCCTAAATTCAAGG
EV536413       --> GGCCGAAGTTGTGGAATGTGCCTGCGTTGTTGGTTTGCCTAAATTCAAGG
FD542764       --> ..................................................
EX897295       --> GGCCGAAGTTGTGGAATGTGCCTGCGTTGTTGGTTTGCCTAAATTCAAGG
EX895005       --> GGCCGAAGTTGTGGAATGTGCCTGCGTTGTTGGTTTGCCTAAATTCAAGG
EW732572       --> GGCCGAAGTTGTGGAATGTGCCTGCGTTGTTGGTTTGCCTAAATTCAAGG
EY905414       --> GGCCGAAGTTGTGGAATGTGCCTGCGTTGTTGGTTTGCCTAAATTCAAGG
FD972206       --> GGCCGAAGTTGTGGAATGTGCCTGCGTTGTTGGTTTGCCTAAATTCAAGG
EX904719       --> GGCCGAAGTTGTGGAATGTGCCTGCGTTGTTGGTTTGCCTAAATTCAAGG

               546    -    596
UN16067        --> GCCATTGTAAGCTAAAGGGAAAGCCATTGTACGTTCTGGTGGAGCCTAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540870       <-- GCCATTGTAAGCTAGAGGGAAAGCCATTGTACGTTCTGGTGGAGCCTAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538750       <-- GCCATTGTAAGCTAAAGGGAAAGCCATTGTACGTTCTGGTGGAGCCTAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901857       <-- GCCATTGTAAGCTAAAGGGAAAGCCATTGTACGTTCTGGTGGAGCCTAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW737255       <-- GGCATTGTAAGCTAAAGGGAAAGCCATTGTACGTTCTGGTGGAGCCTAGC  Raphanus sativus cv Rat-Tail Radish #3870
EX908568       <-- GGCATTGTAAGCTAAAGGGAAAGCCATTGTACGTTCTGGTGGAGCCTAGC  Raphanus sativus cv Rat-Tail Radish #3870
FD968141       <-- GCCATTGTAAGCTAAAGGGAAAGCCATTGTACGTTTTGGTGGAGCCTAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536413       --> GCCATTGTAAGCTAGAGGGAAAGCCATTGTACGTTCTGGTGGAGCCTAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542764       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX897295       --> GGCATTGTAAGCTAAAGGGAAAGCCATTGTACGTTCTGGTGGAGCCTAGC  Raphanus sativus cv Early Scarlet Globe
EX895005       --> GGCATTGTAAGCTAAAGGGAAAGCCATTGTACGTCCTGGTGGAGCCTAGC  Raphanus sativus cv Early Scarlet Globe
EW732572       --> GGCATTGTAAGCTAAAGGGAAAGCCATTGTACGTTCTGGTGGAGCCTAGC  Raphanus sativus cv Rat-Tail Radish #3870
EY905414       --> GCCATTGTAAGCTAAAGGGAAAGCCATTGTACGTTCTGGTGGAGCCTAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972206       --> GCCATTGTAAGCTAAAGGGAAAGCCATTGTACGTTCTGGTGGAGCCTAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX904719       --> GGCATTGTAAGCTAAAGGGAAAGCCATTGTACGTTCTGGTGGAGCCTAGC  Raphanus sativus cv Rat-Tail Radish #3870

               596    -    646
UN16067        --> CAGTTAGATGAAATAGCCTTTTAAGCCTGTTTTACTGAAGTCACCTCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540870       <-- CAGTTAGATGAAATAGCCTTTTAAGCCTGTTTTACTGAAGTCACCTCCAT
FD538750       <-- CAGTTAGATGAAATAGCCTTTTAAGCCTGTTTTACTGAAGTCACCTCCAT
EY901857       <-- CAGTTAGATGAAATAGCCTTTTAAGCCTGTTTTACTGAAGTCACCTCCAT
EW737255       <-- CAGTTAGATGAAATAGCCTTTTAAGCCTGTTTTACTGAAGTCACCTCCAT
EX908568       <-- CAGTTAGATGAAATAGCCTTTTAAGCCTGTTTTACTGAAGTCACCTCCAT
FD968141       <-- CAGTTAGATGAAATAGCCTTTTAAGCCTGTTTTACTGAAGTCACCTCCAT
EV536413       --> CAGTTAGATGAAATAGCCTTTTAAGCCTGTTTTACTGAAGTCACCTCCAT
FD542764       --> ..................................................
EX897295       --> CAGTTAGATGAAATAGCCTTTTAAGCCTGTTTTACTGAAGTCACCTCCAT
EX895005       --> CAGTTAGATGAAATAGCCTTTTAAGCCTGTTTTACTGAAGTCACCTCCAT
EW732572       --> CAGTTAGATGAAATAGCCTTTTAAGCCTGTTTTACTGAAGTCACCTCCAT
EY905414       --> CAGTTAGATGAAATAGCCTTTTAAGCCTGTTTTACTGAAGTCACCTCCAT
FD972206       --> CAGTTAGATGAAATAGCCTTTTAAGCCTGTTTTACTGAAGTCACCTCCAT
EX904719       --> CAGTTAGATGAAATAGCCTTTTAAGCCTGTTTTACTGAAGTCACCTCCAT

               646    -    696
UN16067        --> GACTCCTATATCGTCAAGTTCCAACTTGATGTATTATTATTATTAAGTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540870       <-- GACTCCTATATCGTCAAGTTCCAACTTGATGTATTATTATTATTAAGTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538750       <-- GACTCCTATATCGTCAAGTTCCAACTTGATGTATTATTATTATTAAGTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901857       <-- GACTCCTATATCGTCAAGTTCCAACTTGATGTATTATTATTATTAAGTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW737255       <-- GACTCCTATATCGTCAAGTTCCAACTTGATGTATTACTAT---TAAGTTA  Raphanus sativus cv Rat-Tail Radish #3870
EX908568       <-- GACTCCTATATCGTCAAGGTCCAACTTGATGTATTACTAT---TAAGTTA  Raphanus sativus cv Rat-Tail Radish #3870
FD968141       <-- GACTCCTATATCGTCAAGTTCCAACTTGATGTATTATTATTATTAAGTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536413       --> GACTCCTATATCGTCAAGTTCCAACTTGATGTATTATTATTATTAAGTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542764       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX897295       --> GACTCCTATATCGTCAAGTTCCAACTTGATGTATTACTATTA---AGTTA  Raphanus sativus cv Early Scarlet Globe
EX895005       --> GACTCCTATATCGTCAAGTTCCAACTTGATGTATTACTATTA---AGTTA  Raphanus sativus cv Early Scarlet Globe
EW732572       --> GACTCCTATATCGTCAAGTTCCAACTTGATGTATTACTATTA---AGTTA  Raphanus sativus cv Rat-Tail Radish #3870
EY905414       --> GACTCCTATATCGTCAAGTTCCAACTTGATGTATTATTATTATTAAGTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972206       --> GACTCCTATATCGTCAAGTTCCAACTTGATGTATTATTATTATTAAGTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX904719       --> GACTCCTATATCGTCAAGGTCCAACTTGATGTATTACTATTA---AGTTA  Raphanus sativus cv Rat-Tail Radish #3870

               696    -    746
UN16067        --> TCAACGGTTATGGCAATAATAGAATCGGTTTGATCAATTTATATGTAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540870       <-- TCAACGGTTATGGCAATAATAGAATCGGTTTGATCAATTTATATGTAACT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538750       <-- TCAACGGTTATGGCAATAATAGAATCGGTTTGATCAATTTATATGTAACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901857       <-- TCAACGGTTATGGCAATAATAGAAGCGGTTTGATCAATTTATATGTAACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW737255       <-- TCAACGGTTATGGCAATAATAGAATCGATTTGATCAATTTATATGTAACT  Raphanus sativus cv Rat-Tail Radish #3870
EX908568       <-- TCAACGGTTATGGCAATAATAGAATCGATTTGATCAATTTATATGTAACT  Raphanus sativus cv Rat-Tail Radish #3870
FD968141       <-- TCAACGGTTATGGCAATAATAGAAGCGGTTTGATCAATTTATATGTAACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536413       --> TCAACGGTTATGGCAATAATAGAATCGGTTTGATCAATTTATATGTAA..  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542764       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX897295       --> TCAACGGTTATGGCAATAATAGAATCGATTTGATCAATTTATATGTAACT  Raphanus sativus cv Early Scarlet Globe
EX895005       --> TCAACGGTTATGGCAATAATAGAATCGATTTGATCAATTTATATGTAACT  Raphanus sativus cv Early Scarlet Globe
EW732572       --> TCAACGGTTATGGCAATAATAGAATCGATTTGATCAATTTATATGTAACT  Raphanus sativus cv Rat-Tail Radish #3870
EY905414       --> TCAACGGTTATGGCAATAATAGAAGCGGTTTGATCAATTTATATGTAACT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972206       --> TCAACGGTTATGGCAATAATAGAAGCGGTTTGAT................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX904719       --> TCAACGGTTATGGCAATAATAGAATCGATTTGATCAATTTATATGTAACT  Raphanus sativus cv Rat-Tail Radish #3870

               746    -    796
UN16067        --> AAAGATTGTGTAAACCTTATTAGACTCCATGTGGAATGTTAGCTCATGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540870       <-- AAAGATTGTGTAAACCTTATTAGACTCCATGTGGAATGTTAGCTCATGCT
FD538750       <-- AAAGATTGTGTAAACCTTATTAGACTCCATGTGGAATGTTAGCTCATGCT
EY901857       <-- AAAGATTGTGTAAACCTTATTAGACTCCATGTGGAATGTTAGCTCATGCT
EW737255       <-- AAAGATTGTGTAAACCTTATTAGACTCCATGTGGAAT--GA-CTCATGCT
EX908568       <-- AAAGATTGTGTAAACCTTATTAGACTCCATGTGGAAT--GA-CTCATGCT
FD968141       <-- AAAGATTGTGTAAACCTTATTAGACTCCATGTGGAATGTTAGCTCATGCT
EV536413       --> ..................................................
FD542764       --> ..................................................
EX897295       --> AAAGATTGTGTAA-CCTTATagac..........................
EX895005       --> ..................................................
EW732572       --> AAAGATTGTGTAAACCTTATTAGACTCCATGTGGAATG--A-CTCATGCT
EY905414       --> AAAGATTGTGTAAACCTTATTAGACTCCATGTGGAATGTTAGCTCATGCT
FD972206       --> ..................................................
EX904719       --> AAAGATTGTGTAAACCTTATTAGACTC-ATGTGGAATG--A-CTCATGCT

               796    -    846
UN16067        --> AGTAACAAGCTACCTTGTATGTACTTTGTTCTACATTGTTCAAAGCTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540870       <-- AGTAACAAGCTACCTTGTATGTACTTTGTTCTACATTGTTCAAAGCTTGT
FD538750       <-- AGTAACAAGCTACCTTGTATGTACTTTGTTCTACATTGTTCAAAGCTTGT
EY901857       <-- AGTAACAAGCTACCTTGTATGTACTTTGTTCTACATTGTTCAAAGCTTGT
EW737255       <-- AGCAACAAGC........................................
EX908568       <-- AGT...............................................
FD968141       <-- AGTAACAAGCTACCTTGTATGTACTTTGTTTTACATTGTTCAAAGCTTGT
EV536413       --> ..................................................
FD542764       --> ..................................................
EX897295       --> ..................................................
EX895005       --> ..................................................
EW732572       --> AGCAACAAGC........................................
EY905414       --> AGTA-CAAGCTACCTTGTATGTACTTTGTTCTACATTGTTCAAAGCTTGT
FD972206       --> ..................................................
EX904719       --> AGT...............................................

               846    -    896
UN16067        --> TTGTTTCATCAGTGTTGACTTTGGTTGTTGAATTGGAATACGTGTTTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540870       <-- TTGTTTC...........................................
FD538750       <-- TTGTTTCATCAGTGTTGACTTTGGTTGTTGAATTGGAATACGTGTTTTGT
EY901857       <-- TTGTTTCATCAGTGTTGACTTTGGTTGTTGAATTGGAATACGTGTTTTGT
EW737255       <-- ..................................................
EX908568       <-- ..................................................
FD968141       <-- TTGTTTCATCAGTGTTGACTTTGGTTGTTGAATTGGAATACGTGTTTTGT
EV536413       --> ..................................................
FD542764       --> ..................................................
EX897295       --> ..................................................
EX895005       --> ..................................................
EW732572       --> ..................................................
EY905414       --> TTGTTTC...........................................
FD972206       --> ..................................................
EX904719       --> ..................................................

               896    -    946
UN16067        --> TAACATGAATAACGGGTTTCATTTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540870       <-- ..........................
FD538750       <-- TAACATGAATAACGGGTTTCATTTAC
EY901857       <-- g.........................
EW737255       <-- ..........................
EX908568       <-- ..........................
FD968141       <-- TAACATG...................
EV536413       --> ..........................
FD542764       --> ..........................
EX897295       --> ..........................
EX895005       --> ..........................
EW732572       --> ..........................
EY905414       --> ..........................
FD972206       --> ..........................
EX904719       --> ..........................