Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN16076

               1      -     51
UN16076        --> GGAAACTTAAAACATTCTCAATGACTTTTCCTTCTCCTTTTCTTTTTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544506       <-- GGAAACTTAAAACATTCTCAATGACTTTTCCTTCTCCTTTTCTTTTTTCT
EX776251       <-- .GAAACTTAAAACATTCTCAATGACTTTTCCTTCTCCTTTTCTTTTTTCT
EY893634       <-- ..................................................
EV540575       <-- ..................................................
EW730033       <-- ..................................................
EW730813       <-- ..................................................
FD575026       <-- ..................................................
EV548922       --> GGAAACTTAAAACATTCTCAATGACTTTTCCTTCTCCTTTTCTTTTTTCT
EX772256       --> .GAAACTTAAAACATTCTCAATGACTTTTCCTTCTCCTTTTCTTTTTTCT
EX770343       --> ................................................gg
EY897266       --> ..................................................
FD541889       --> ..................................................
EV536042       --> ..................................................
FD965547       --> ..................................................
EW725494       --> ..................................................
EW725529       --> ..................................................
FD571149       --> ..................................................

               51     -    101
UN16076        --> ACACGTCTCTATGGCTCCTATAACTTCTCTAGGTCTCTGGACGAAGGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544506       <-- ACACGTCTCTATGACTCCTATAACTTCTCTAGGTCTCTGGACGAAGGATT
EX776251       <-- ACACGTCTCTATGGCTCCTATAACTTCTCTAGGTCTCTGGACGAAGGATT
EY893634       <-- .........gATGGCTCCTATAACTTCTCTAGCTCTCAGGACCTAGGATT
EV540575       <-- ..................................................
EW730033       <-- ..................................................
EW730813       <-- ..................................................
FD575026       <-- ..................................................
EV548922       --> ACACGTCTCTATGACTCCTATAACTTCTCTAGGTCTCTGGACGAAGGATT
EX772256       --> ACACGTCTCTATGGCTCCTATAACTTCTCTAGGTCTCTGGACGAAGGATT
EX770343       --> ACACGTCTCTATGGCTCCTATAACTTCTCTAGGTCTCTGGACGAAGGATT
EY897266       --> ........ggATGGCTCCTATAACTTCTCTAGCTCTCAGGACCTAGGATT
FD541889       --> .................................................g
EV536042       --> ..................................................
FD965547       --> ..................................................
EW725494       --> ..................................................
EW725529       --> ..................................................
FD571149       --> .................................................g

               101    -    151
UN16076        --> TGCACTGTTAGTCATCTCCTTTCGTCGTCTCTCTAGCTACACGTTTCACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544506       <-- TGCACTGTTAGTCATCTCCTTTCGTCGTCTCTCTAGCTACACGTTTCACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776251       <-- TGCACTGTTAGTCATCTCCTTTCGTCGTCTCTCTAGCTACACGTTTCACA  Raphanus raphanistrum subsp. landra
EY893634       <-- TGCACTGTTAGTCATCTCCTTTCGTCGTCTCTCTAGCTACACGTTCCACA  Raphanus raphanistrum subsp. maritimus
EV540575       <-- .ggACTGTTAGTCATCTCCTTTCGTCGTCTCTCTAGCTACACGTTCCACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW730033       <-- .ggatgtTTAGTCATCTCCTTTCGTCGTCTCTCTAGCTACACGTTTCACA  Raphanus sativus cv Early Scarlet Globe
EW730813       <-- .ggatgtTTAGTCATCTCCTTTCGTCGTCTCTCTAGCTACACGTTTCACA  Raphanus sativus cv Early Scarlet Globe
FD575026       <-- .............................TCTCTAGCTACACGTTTCACA  Raphanus sativus cv Early Scarlet Globe
EV548922       --> TGCACTGTTAGTCATCTCCTTTCGTCGTCTCTCTAGCTACACGTTTCACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX772256       --> TGCACTGTTAGTCATCTCCTTTCGTCGTCTCTCTAGCTACACGTTTCACA  Raphanus raphanistrum subsp. landra
EX770343       --> TGCACTGTTAGTCATCTCCTTTCGTCGTCTCTCTAGCTACACGTTTCACA  Raphanus raphanistrum subsp. landra
EY897266       --> TGCACTGTTAGTCATCTCCTTTCGTCGTCTCTCTAGCTACACGTTCCACA  Raphanus raphanistrum subsp. maritimus
FD541889       --> gGCACTGTTAGTCGTCTCCTTTCGTCGTCTCTCTAGCTACACGTTCCACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536042       --> .ggACTGTTAGTCATCTCCTTTCGTCGTCTCTCTAGCTACACGTTCCACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD965547       --> .ggACTGTTAGTCATCTCCTTTCGTCGTCTCTCTAGCTACACGTTCCACA  Raphanus raphanistrum subsp. maritimus
EW725494       --> .ggatgtTTAGTCATCTCCTTTCGTCGTCTCTCTAGCTACACGTTTCACA  Raphanus sativus cv Early Scarlet Globe
EW725529       --> .ggatgtTTAGTCATCTCCTTTCGTCGTCTCTCTAGCTACACGTTTCACA  Raphanus sativus cv Early Scarlet Globe
FD571149       --> ggcatgtTTAGTCATCTCCTTTCGTCGTCTCTCTAGCTACACGTTTCACA  Raphanus sativus cv Early Scarlet Globe

               151    -    201
UN16076        --> GGAGATCAGAAACAACAATGAGTCAATACAATCAACATCCCGTTGGTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544506       <-- GGAGATCAGAAACAACAATGAGTCAATACAATCAACATCCCGTTGGTGTT
EX776251       <-- GGAGATCAGAAACAACAATGAGTCAATACAATCAACATCCCGTTGGTGTT
EY893634       <-- GGAGATCAGAAACAACAATGAGTCAATACAATCAACATCCCGTTGGTGTT
EV540575       <-- GGAGATCAGAAACAACAATGAGTCAATACAATCAACATCCCGTTGGTGTT
EW730033       <-- GGAGATCAGAAACAACAATGAGTCAATACAATCAACATCCCGTTGGTGTT
EW730813       <-- GGAGATCAGAAACAACAATGAGTCAATACAATCAACATCCCGTTGGTGTT
FD575026       <-- GGAGATCAGAAACAACAATGAGTCAATACAATCAACATCCCGTTGGTGTT
EV548922       --> GGAGATCAGAAACAACAATGAGTCAATACAATCAACATCCCGTTGGTGTT
EX772256       --> GGAGATCAGAAACAACAATGAGTCAATACAATCAACATCCCGTTGGTGTT
EX770343       --> GGAGATCAGAAACAACAATGAGTCAATACAATCAACATCCCGTTGGTGTT
EY897266       --> GGAGATCAGAAACAACAATGAGTCAATACAATCAACATCCCGTTGGTGTT
FD541889       --> GGAGATCAGAAACAACAATGAGTCAATACAATCAACATCCCGTTGGTGTT
EV536042       --> GGAGATCAGAAACAACAATGAGTCAATACAATCAACATCCCGTTGGTGTT
FD965547       --> GGAGATCAGAAACAACAATGAGTCAATACAATCAACATCCCGTTGGTGTT
EW725494       --> GGAGATCAGAAACAACAATGAGTCAATACAATCAACATCCCGTTGGTGTT
EW725529       --> GGAGATCAGAAACAACAATGAGTCAATACAATCAACATCCCGTTGGTGTT
FD571149       --> GGAGATCAGAAACAACAATGAGTCAATACAATCAACATCCCGTTGGTGTT

               201    -    251
UN16076        --> CCTCCTCCTCAAGGTTATCCGCCTGAGGGGTATCCACCGCAAGGATATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544506       <-- CCTCCTCCTCAAGGTTATCCGCCTGAGGGGTATCCACCGCAAGGATATCC
EX776251       <-- CCTCCTCCTCAAGGTTATCCGCCTGAGGGGTATCCACCGCAAGGATATCC
EY893634       <-- CCTCCTCCTCAAGGTTATCCGCCTGAGGGGTATCCACCGCAAGGATATCC
EV540575       <-- CCTCCTCCTCAAGGTTATCCGCCTGAGGGGTATCCACCGCAAGGATATCC
EW730033       <-- CCTCCTCCTCAAGGTTATCCGCCTGAGGGGTATCCACCGCAAGGATATCC
EW730813       <-- CCTCCTCCTCAAGGTTATCCGCCTGAGGGGTATCCACCGCAAGGATATCC
FD575026       <-- CCTCCTCCTCAAGGTTATCCGCCTGAGGGGTATCCACCGCAAGGATATCT
EV548922       --> CCTCCTCCTCAAGGTTATCCGCCTGAGGGGTATCCACCGCAAGGATATCC
EX772256       --> CCTCCTCCTCAAGGTTATCCGCCTGAGGGGTATCCACCGCAAGGATATCC
EX770343       --> CCTCCTCCTCAAGGTTATCCGCCTGAGGGGTATCCACCGCAAGGATATCC
EY897266       --> CCTCCTCCTCAAGGTTATCCGCCTGAGGGGTATCCACCGCAAGGATATCC
FD541889       --> CCTCCTCCTCAAGGTTATCCGCCTGAGGGGTATCCACCGCAAGGATATCC
EV536042       --> CCTCCTCCTCAAGGTTATCCGCCTGAGGGGTATCCACCGCAAGGATATCC
FD965547       --> CCTCCTCCTCAAGGTTATCCGCCTGAGGGGTATCCACCGCAAGGATATCC
EW725494       --> CCTCCTCCTCAAGGTTATCCGCCTGAGGGGTATCCACCGCAAGGATATCC
EW725529       --> CCTCCTCCTCAAGGTTATCCGCCTGAGGGGTATCCACCGCAAGGATATCC
FD571149       --> CCTCCTCCTCAAGGTTATCCGCCTGAGGGGTATCCACCGCAAGGATATCT

               251    -    301
UN16076        --> TCCTCAGGGATATCCGCCTCAAGGCTACCCACAGCAGGGCTATCCACCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544506       <-- TCCTCAGGGATATCCGCCTCAAGGCTACCCACAGCAGGGATATCCACCAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776251       <-- TCCTCAGGGATATCCGCCTCAAGGCTACCCACAGCAGGGATATCCACCAC  Raphanus raphanistrum subsp. landra
EY893634       <-- TCCTCAGGGATATCCGCCTCAAGGCTACCCACAGCAGGGCTATCCACCAC  Raphanus raphanistrum subsp. maritimus
EV540575       <-- TCCTCAGGGATATCCGCCTCAAGGCTACCCACAGCAGGGCTATCCACCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW730033       <-- TCCTCAGGGATATCCGCCTCAAGGCTACCCACAGCAGGGCTATCCACCAC  Raphanus sativus cv Early Scarlet Globe
EW730813       <-- TCCTCAGGGATATCCGCCTCAAGGCTACCCACAGCAGGGCTATCCACCAC  Raphanus sativus cv Early Scarlet Globe
FD575026       <-- TCCTCAGGGATATCCGCCTCAAGGCTACCCACAGCAGGGCTATCCACCAC  Raphanus sativus cv Early Scarlet Globe
EV548922       --> TCCTCAGGGATATCCGCCTCAAGGCTACCCACAGCAGGGATATCCACCAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX772256       --> TCCTCAGGGATATCCGCCTCAAGGCTACCCACAGCAGGGATATCCACCAC  Raphanus raphanistrum subsp. landra
EX770343       --> TCCTCAGGGATATCCGCCTCAAGGCTACCCACAGCAGGGATATCCACCAC  Raphanus raphanistrum subsp. landra
EY897266       --> TCCTCAGGGATATCCGCCTCAAGGCTACCCACAGCAGGGCTATCCACCAC  Raphanus raphanistrum subsp. maritimus
FD541889       --> TCCTCAGGGATATCCGCCTCAAGGCTACCCACAGCAGGGCTATCCACCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536042       --> TCCTCAGGGATATCCGCCTCAAGGCTACCCACAGCAGGGCTATCCACCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD965547       --> TCCTCAGGGATATCCGCCTCAAGGCTACCCACAGCAGGGCTATCCACCAC  Raphanus raphanistrum subsp. maritimus
EW725494       --> TCCTCAGGGATATCCGCCTCAAGGCTACCCACAGCAGGGCTATCCACCAC  Raphanus sativus cv Early Scarlet Globe
EW725529       --> TCCTCAGGGATATCCGCCTCAAGGCTACCCACAGCAGGGCTATCCACCAC  Raphanus sativus cv Early Scarlet Globe
FD571149       --> TCCTCAGGGATATCCGCCTCAAGGCTACCCACAGCAGGGCTATCCACCAC  Raphanus sativus cv Early Scarlet Globe

               301    -    351
UN16076        --> CGCAGGGTTATCCTCAGCAATCTCCTCCTTATGCACCGCAATATCCACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544506       <-- CGCAGGGTTATCCTCAGCAATCTCCTCCTTATGCACCGCAATATCCACAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776251       <-- CGCAGGGTTATCCTCAGCAATCTCCTCCTTATGCACCGCAATATCCACAG  Raphanus raphanistrum subsp. landra
EY893634       <-- CGCAGGGTTATCCTCATCAATCTCCTCCTTATGCACCGCAATATGCACAG  Raphanus raphanistrum subsp. maritimus
EV540575       <-- CGCAGGGTTATCCTCATCAATCTCCTCCTTATGCACCGCAATATCCACAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW730033       <-- CGCAGGGTTATCCTCAGCAATCTCCTCCTTATGCACCGCAATATCAACAG  Raphanus sativus cv Early Scarlet Globe
EW730813       <-- CGCAGGGTTATCCTCAGCAATCTCCTCCTTATGCACCGCAATATCAACAG  Raphanus sativus cv Early Scarlet Globe
FD575026       <-- CGCAGGGTTATCCTCAGCAATCTCCTCCTTATGCACCGCAATATCAACAG  Raphanus sativus cv Early Scarlet Globe
EV548922       --> CGCAGGGTTATCCTCAGCAATCTCCTCCTTATGCACCGCAATATCCACAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX772256       --> CGCAGGGTTATCCTCAGCAATCTCCTCCTTATGCACCGCAATATCCACAG  Raphanus raphanistrum subsp. landra
EX770343       --> CGCAGGGTTATCCTCAGCAATCTCCTCCTTATGCACCGCAATATCCACAG  Raphanus raphanistrum subsp. landra
EY897266       --> CGCAGGGTTATCCTCATCAATCTCCTCCTTATGCACCGCAATATGCACAG  Raphanus raphanistrum subsp. maritimus
FD541889       --> CGCAGGGTTATCCTCATCAATCTCCTCCTTATGCACCGCAATATCCACAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536042       --> CGCAGGGTTATCCTCATCAATCTCCTCCTTATGCACCGCAATATCCACAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD965547       --> CGCAGGGTTATCCTCATCAATCTCCTCCTTATGCACCGCAATATGCACAG  Raphanus raphanistrum subsp. maritimus
EW725494       --> CGCAGGGTTATCCTCAGCAATCTCCTCCTTATGCACCGCAATATCAACAG  Raphanus sativus cv Early Scarlet Globe
EW725529       --> CGCAGGGTTATCCTCAGCAATCTCCTCCTTATGCACCGCAATATCAACAG  Raphanus sativus cv Early Scarlet Globe
FD571149       --> CGCAGGGTTATCCTCAGCAATCTCCTCCTTATGCACCGCAATATCAACAG  Raphanus sativus cv Early Scarlet Globe

               351    -    401
UN16076        --> CAGCATCAGCAGCAACAACAGAGCAAGCCTGGGTGTCTAGACGGATGTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544506       <-- CAGCATCAGCAGCAACAACAGAGCAAGCCTGGGTGTCTAGACGGATGTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776251       <-- CAGCATCAGCAGCAACAACAGAGCAAGCCTGGGTGTCTAGACGGATGTCT  Raphanus raphanistrum subsp. landra
EY893634       <-- CAGCATCAGCAGCAACAACAGAGTAAGCCTGGGTGTCTAGACGGATGTCT  Raphanus raphanistrum subsp. maritimus
EV540575       <-- CAGCATCAGCAGCAACAACAGAGCAAGCCTGGGTGTCTAGACGGATGTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW730033       <-- CAGCATCAGCAGCAACAACAGAGCAAGCCTGGGTGTCTTGACGGATGTCT  Raphanus sativus cv Early Scarlet Globe
EW730813       <-- CAGCATCAGCAGCAACAACAGAGCAAGCCTGGGTGTCTTGACGGATGTCT  Raphanus sativus cv Early Scarlet Globe
FD575026       <-- CAGCATCAGCAGCAACAACAGAGCAAGCCTGGGTGTCTTGACGGATGTCT  Raphanus sativus cv Early Scarlet Globe
EV548922       --> CAGCATCAGCAGCAACAACAGAGCAAGCCTGGGTGTCTAGACGGATGTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX772256       --> CAGCATCAGCAGCAACAACAGAGCAAGCCTGGGTGTCTAGACGGATGTCT  Raphanus raphanistrum subsp. landra
EX770343       --> CAGCATCAGCAGCAACAACAGAGCAAGCCTGGGTGTCTAGACGGATGTCT  Raphanus raphanistrum subsp. landra
EY897266       --> CAGCATCAGCAGCAACAACAGAGTAAGCCTGGGTGTCTAGACGGATGTCT  Raphanus raphanistrum subsp. maritimus
FD541889       --> CAGCATCAGCAGCAACAACAGAGCAAGCCTGGGTGTCTAGACGGATGTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536042       --> CAGCATCAGCAGCAACAACAGAGCAAGCCTGGGTGTCTAGACGGATGTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD965547       --> CAGCATCAGCAGCAACAACAGAGCAAGCCTGGGTGTCTAGACGGATGTCT  Raphanus raphanistrum subsp. maritimus
EW725494       --> CAGCATCAGCAGCAACAACAGAGCAAGCCTGGGTGTCTTGACGGATGTCT  Raphanus sativus cv Early Scarlet Globe
EW725529       --> CAGCATCAGCAGCAACAACAGAGCAAGCCTGGGTGTCTTGACGGATGTCT  Raphanus sativus cv Early Scarlet Globe
FD571149       --> CAGCATCAGCAGCAACAACAGAGCAAGCCTGGGTGTCTTGACGGATGTCT  Raphanus sativus cv Early Scarlet Globe

               401    -    451
UN16076        --> TGCTGTTCTCTGCTGTTGTTGTCTCTGTGATTTATGCATCTTCTGATTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544506       <-- TGCTGTTTTCTGCTGTTGTTGTCTCTGTGATTTATGCATCTTCTGATTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776251       <-- TGCTGTTTTCTGCTGTTGTTGTCTCTGTGATTTATGCATCTTCTGATTGG  Raphanus raphanistrum subsp. landra
EY893634       <-- TGCTGTTCTCTGCTGTTGTTGTCTCTGTGATCTTTGCATCTTCTGATTGG  Raphanus raphanistrum subsp. maritimus
EV540575       <-- TGCTGTTCTCTGCTGTTGTTGTCTCTGTGATCTTTGCATCTTCTGATTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW730033       <-- TGCTGTTCTCTGCTGTTGTTGTCTCTGTGATTTATGCATCTTCTGATTGG  Raphanus sativus cv Early Scarlet Globe
EW730813       <-- TGCTGTTCTCTGCTGTTGTTGTCTCTGTGATTTATGCATCTTCTGATTGG  Raphanus sativus cv Early Scarlet Globe
FD575026       <-- TGCTGTTTTCTGCTGTTGTTGTCTCTGTGATTTATGCATCTTCTGATTGG  Raphanus sativus cv Early Scarlet Globe
EV548922       --> TGCTGTTCTCTGCTGTTGTTGTCTCTGTGATTTATGCATCTTCTGATTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX772256       --> TGCTGTTCTCTGCTGTTGTTGTCTCTGTGATTTATGCATCTTCTGATTGG  Raphanus raphanistrum subsp. landra
EX770343       --> TGCTGTTCTCTGCTGTTGTTGTCTCTGTGATTTATGCATCTTCTGATTGG  Raphanus raphanistrum subsp. landra
EY897266       --> TGCTGTTCTCTGCTGTTGTTGTCTCTGTGATCTTTGCATCTTCTGATTGG  Raphanus raphanistrum subsp. maritimus
FD541889       --> TGCTGTTCTCTGCTGTTGTTGTCTCTGTGATCTTTGCATCTTCTGATTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536042       --> TGCTGTTCTCTGCTGTTGTTGTCTCTGTGATCTTTGCATCTTCTGATTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD965547       --> TGCTGTTCTCTGCTGTTGTTGTCTCTGTGATCTTTGCATCTTCTGATTGG  Raphanus raphanistrum subsp. maritimus
EW725494       --> TGCTGTTCTCTGCTGTTGTTGTCTCTGTGATTTATGCATCTTCTGATTGG  Raphanus sativus cv Early Scarlet Globe
EW725529       --> TGCTGTTCTCTGCTGTTGTTGTCTCTGTGATTTATGCATCTTCTGATTGG  Raphanus sativus cv Early Scarlet Globe
FD571149       --> TGCTGTTCTCTGCTGTTGTTGTCTCTGTGATTTATGCATCTTCTGATTGG  Raphanus sativus cv Early Scarlet Globe

               451    -    501
UN16076        --> AGTACCTGCTCGGAGCTGCT-TTTTAATTGCAAGAGAGTGTTTGGCGACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544506       <-- AGTACCTGCTCGGAGCTGCT-TTTTAATTGCAAGAGAGTGTTTGGCGACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776251       <-- AGTACCTGCTCGGAGCTGCT-TTTTAATTGCAAGAGAGTGTTTGGCGACA  Raphanus raphanistrum subsp. landra
EY893634       <-- AGTACCTGCTCGGAGCTGCTGATTTAATTGCAAGAGAGTGTTTGGCAACA  Raphanus raphanistrum subsp. maritimus
EV540575       <-- AGTACCTGTTCGGAGCTGCT-TTTTAATTGCAAGAGAGTGTTTGGCAACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW730033       <-- AGTACCTGCTCGGAGCTGCT-TTTTAATTGCAAGAGAGTGTTTGGCGACA  Raphanus sativus cv Early Scarlet Globe
EW730813       <-- AGTACCTGCTCGGAGCTGCT-TTTTAATTGCAAGAGAGTGTTTGGCGACA  Raphanus sativus cv Early Scarlet Globe
FD575026       <-- GGTACCTGCTCGGAGCTGCT-TTTTAATTGCAAGAGAGTGTTTGGCGACA  Raphanus sativus cv Early Scarlet Globe
EV548922       --> AGTACCTGCTCGGAGCTGCT-TTTTAATTGCAAGAGAGTGTTTGGCGACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX772256       --> AGTACCTGCTCGGAGCTGCT-TTTTAATTGCAAGAGAGTGTTTGGCGACA  Raphanus raphanistrum subsp. landra
EX770343       --> AGTACCTACTCGGAGCTGCT-TTTTAATTGCAAGAGAGTGTTTGGCGACA  Raphanus raphanistrum subsp. landra
EY897266       --> AGTACCTGCTCGGAGCTGCTGATTTAATTGCAAGAGAGTGTTTGGCAACA  Raphanus raphanistrum subsp. maritimus
FD541889       --> AGTACCTGTTCGGAGCTGCT-TTTTAATTGCAAGAGAGTGTTTGGCAACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536042       --> AGTACCTGTTCGGAGCTGCT-TTTTAATTGCAAGAGAGTGTTTGGCAACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD965547       --> AGTACCTGCTCGGAGCTGCTGATTTAATTGCAAGAGAGTGTTTGGCAACA  Raphanus raphanistrum subsp. maritimus
EW725494       --> AGTACCTGCTCGGAGCTGCT-TTTTAATTGCAAGAGAGTGTTTGGCGACA  Raphanus sativus cv Early Scarlet Globe
EW725529       --> AGTACCTGCTCGGAGCTGCT-TTTTAATTGCAAGAGAGTGTTTGGCGACA  Raphanus sativus cv Early Scarlet Globe
FD571149       --> GGTACCTGCTCGGAGCTGCT-TTTTAATTGCAAGAGAGTGTTTGGCGACA  Raphanus sativus cv Early Scarlet Globe

               501    -    551
UN16076        --> CAAGATCATTTGTTGCGTAATGGGCATTAAAATGAATTGCTGGATACAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544506       <-- CAAGATCATTTGTTGCGTAATGGGCATTAAAATGAATTGCTGGATACAAT
EX776251       <-- CAAGATCATTTGTTGCGTAATGGGCATTAAAATGAATTGCTGGATACAAT
EY893634       <-- CAAGATCATTTGTTGTGTAATGGGCATTAAAATGAATTTCTGGATACAAT
EV540575       <-- CAAGATCATTTGTTGCGTAATGGGCATTAAAATGAATTGCTGGATACAAT
EW730033       <-- CAAGATCATTTGTTGCGTAATGGGCATTAAAATGAATTGCTGGATACAAT
EW730813       <-- CAAGATCATTTGTTGCGTAATGGGCATTAAAATGAATTGCTGGATACAAT
FD575026       <-- CAAGATCATTTGTTGCGTAATGGGCATTAAAATGAATTGCTGGATACAAT
EV548922       --> CAAGATCATTTGTTGCGTAATGGGCATTAAAATGAATTGCTGGATACAAT
EX772256       --> CAAGATCATTTGTTGCGTAATGGGCATTAAAATGAATTGCTGGATACAAT
EX770343       --> CAAGATCATTTGTTGCGTAATGGGCATTAAAATGAATTGCTGGATACAAT
EY897266       --> CAAGATCATTTGTTGTGTAATGGGCATTAAAATGAATTTCTGGATACAAT
FD541889       --> CAAGATCATTTGTTGCGTAATGGGCATTAAAATGAATTGCTGGATACAAT
EV536042       --> CAAGATCATTTGTTGCGTAATGGGCATTAAAATGAATTGCTGGATACAAT
FD965547       --> CAAGATCATTTGTTGTGTAATGGGCATTAAAATGAATTTCTGGATACAAT
EW725494       --> CAAGATCATTTGTTGCGTAATGGGCATTAAAATGAATTGCTGGATACAAT
EW725529       --> CAAGATCATTTGTTGCGTAATGGGCATTAAAATGAATTGCTGGATACAAT
FD571149       --> CAAGATCATTTGTTGCGTAATGGGCATTAAAATGAATTGCTGGATACAAT

               551    -    601
UN16076        --> CTCTTGTATATCCTCTGTCGTATTATCTTTTATGTTTTTCGATTCATAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544506       <-- CTCTTGTATATCCTCTGTCGTATTATCTTTTATGTTTTTCGATTCGTAAA
EX776251       <-- CTCTTGTATATCCTCTGTCGTATTATCTTTTATGTTTTTCGATTCATAAA
EY893634       <-- CTCTTGTATATCCTCTGTCGTATTATCTTTTATGTTTT-CGATTCATAAA
EV540575       <-- CTCTTGTATATCCTCTGTCGTATTATCTTTTATGTTTTTCGATTCATAAA
EW730033       <-- CTCTTGTATATCCTCTGTCGTATTATCTTTTATGTTTTTCGATTCATAAA
EW730813       <-- CTCTTGTATATCCTCTGTCGTATTATCTTTTATGTTTTTCGATTCATAAA
FD575026       <-- CTCTTGTATATCCTCTGTCGTATTATCTTTTATGTTTTTCGATTCATAAA
EV548922       --> CTCTTGTATATCCTCTGTCGTATTATCTTTTATGTTTTTCGATTCGTAAA
EX772256       --> CTCTTGTATATCCTCTGTCGTATTATCTTTTATGTTTTTCGATTCATAAA
EX770343       --> CTCTTGTATATCCTCTGTCGTATTATCTTTTATGTTTTTCGATTCATAAA
EY897266       --> CTCTTGTATATCCTCTGTCGTATTATCTTTTATGTTTT-CGATTCATAAA
FD541889       --> CTCTTGTATATCCTCTGTCGTATTATCTTTTATGTTTTTCGATTCATAAA
EV536042       --> CTCTTGTATATCCTCTGTCGTATTATCTTTTATGTTTTTCGATTCATAAA
FD965547       --> CTCTTGTATATCCTCTGTCGTATTATCTTTTATGTTTT-CGATTCATAAA
EW725494       --> CTCTTGTATATCCTCTGTCGTATTATCTTTTATGTTTTTCGATTCATAAA
EW725529       --> CTCTTGTATATCCTCTGTCGTATTATCTTTTATGTTTTTCGATTCATAAA
FD571149       --> CTCTTGTATATCCTCTGTCGTATTATCTTTTATGTTTTTCGATTCATAAA

               601    -    651
UN16076        --> TAACATATTGTCTATCGACTTTCTGGCTTGGTTTGGATTTGAGACTAGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544506       <-- TAACATATTGTCTATCGACTTTCTGGCTTGGTTTGGATTTGAGACTAGCG
EX776251       <-- TAACATATTGTCTATCGACTTTCTGGCTTGGTTTGGATTTGAGACTAGCG
EY893634       <-- TAACATATTGTCTATCGACTTTCTGGCTTGGTTTGGATTTGAGACTAGCG
EV540575       <-- TAACATATTGTCTATCGACTTTCTGGCTTGGTTTGGTATTGAGACTAGCG
EW730033       <-- TAACATATTGTCTATCGACTTTCTGGCTTGGTTTGGATTTGAGACTAGCG
EW730813       <-- TAACATATTGTCTATCGACTTTCTGGCTTGGTTTGGATTTGAGACTAGCG
FD575026       <-- TAACATATTGTCTATCGACTTTCTGGCTTGGTTTGGATTTGAGACTAGCG
EV548922       --> TAACATATTGTCTATCGACTTTCTGGCTTGGTTTGGATTTGAGACTAGCG
EX772256       --> TAACATATTGTCTATCGACTTTCTGGCTTGGTTTGGATTTGAGACTAGCG
EX770343       --> CAACATATTGTCTATCGACTTTCTGGCTTGGTTTGGATTTGAGACTAGCG
EY897266       --> TAACATATTGTCTATCGACTTTCTGGCTTGGTTTGGATTTGAGACTAGCG
FD541889       --> TAACATATTGTCTATCGACTTTCTGG........................
EV536042       --> TAACATATTGTCTATCGACTTTCTGGCTTGGTTTGGTATTGAGACTAGCG
FD965547       --> TAACATATTGTCTATCGACTTTCTGGCTTGGTTTGGATTTGAGACTAGCG
EW725494       --> TAACATATTGTCTATCGACTTTCTGGCTTGGTTTGGATTTGAGACTAGCG
EW725529       --> TAACATATTGTCTATCGACTTTCTGGCTTGGTTTGGATTTGAGACTAGCG
FD571149       --> TAACATATTGTCTATCGACTTTCTGGCTTGGTTTGGATTTGAGACTAGCG

               651    -    701
UN16076        --> GGAATGTAAATTGGTGTGGTTGTGGAGACACTATTCCTTTTATTTACTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544506       <-- GGAATGCAAATTGGTGTGGTTGTGGAGACACTATTCCTTTTATTTACTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776251       <-- GGAATGTAAATTGGTGTGGTTGTGGAGACACTATTCCTTTTATTTACTTT  Raphanus raphanistrum subsp. landra
EY893634       <-- GGAATGTAAATTGGTGTGGTTGTGGAGACACTATTCCTTTTATTTACTTC  Raphanus raphanistrum subsp. maritimus
EV540575       <-- GGAATGTAAATTGGTGTGGTCGTGGAGACACTATTCCTTTTATTTACTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW730033       <-- GGAATGTAAATTGGTGTGGTTGTGGATACACTATTCCTTTTATTTATTTT  Raphanus sativus cv Early Scarlet Globe
EW730813       <-- GGAATGTAAATTGGTGTGGTTGTGGATACACTATTCCTTTTATTTATTTT  Raphanus sativus cv Early Scarlet Globe
FD575026       <-- GGAATGTAAATTGGTGTGGTTGTGGAGACACTATTCCTTTTATTTATTTT  Raphanus sativus cv Early Scarlet Globe
EV548922       --> GGAATGCAAATTGGTGTGGTTGTGGAGACACTATTCCTTTTATTTACTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX772256       --> GGAATGTAA-TTGGTGTGGTTGTGGAGACACTATTCCTTTTATTTACTTT  Raphanus raphanistrum subsp. landra
EX770343       --> GGAATGTAAATTGGTGTGGTTGTGGAGACACTATTCCTTTTATTTACTTT  Raphanus raphanistrum subsp. landra
EY897266       --> GGAATGTAAATTGGTGTGGTTGTGGAGACACTATTCCTTTTATTTACTTC  Raphanus raphanistrum subsp. maritimus
FD541889       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536042       --> GGAATGTAAATTGGTGTGGTCGTGGAGACACTATTCCTTTTATTTACTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD965547       --> GGAATGTAAATTGGTGTGGTTGTGGAGAC.....................  Raphanus raphanistrum subsp. maritimus
EW725494       --> GGAATGTAAATTGGTGTGGTTGTGGATACACTATTCCTTTTATTTATTTT  Raphanus sativus cv Early Scarlet Globe
EW725529       --> GGAATGTAAATTGGTGTGGTTGTGGATACACTATTCCTTTTATTTATTTT  Raphanus sativus cv Early Scarlet Globe
FD571149       --> GGAATGTAAATTGGTGTGGTTGTGGAGACACTATTCCTTTTATTTATTTT  Raphanus sativus cv Early Scarlet Globe

               701    -    751
UN16076        --> CGTATGTCATTGGATTTT--TTTAATACATATTGATATCTTCATCAATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544506       <-- CGTATGTCATTGGATTTT--TTTttt........................
EX776251       <-- CGTATGTCATTGGATTTT--TTTttgatac....................
EY893634       <-- CGTATGTCATTGGATTTTGTTTTAATAC......................
EV540575       <-- CGTATGcc..........................................
EW730033       <-- CGTATGTCATTGGATTTT--TTTAATACATATTGATATCTTCATCAATTG
EW730813       <-- CGTATGTCATTGGATTTT--TTTAATACATATTGATATCTTCATCAATTG
FD575026       <-- CGTATGTCATTGGATTTT--TTT...........................
EV548922       --> CGTATGTCATTGGATTTT--TTTt..........................
EX772256       --> CGTAT.............................................
EX770343       --> CG................................................
EY897266       --> CGTATGTCATTGGATTTT-GTTTTATAC......................
FD541889       --> ..................................................
EV536042       --> CGTATGcc..........................................
FD965547       --> ..................................................
EW725494       --> CGTATGTCATTGGATTTT--TTTAATACATATTGATATCTTCATCAATTG
EW725529       --> CGTATGTCATTGGATTTT--TTTAATACATATTGATATCTTCATCAATTG
FD571149       --> CGTATGTCATTGGATTTT--TTT...........................

               751    -    801
UN16076        --> AAAAGTAGATTCC
                   ~~~~~~~~~~~~~
EV544506       <-- .............
EX776251       <-- .............
EY893634       <-- .............
EV540575       <-- .............
EW730033       <-- AAAAGTAGATTCC
EW730813       <-- AAAAGTAGATTCC
FD575026       <-- .............
EV548922       --> .............
EX772256       --> .............
EX770343       --> .............
EY897266       --> .............
FD541889       --> .............
EV536042       --> .............
FD965547       --> .............
EW725494       --> AAAAGTAGATTCC
EW725529       --> AAAAGTAGATTCC
FD571149       --> .............