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Alignment for radish unigene UN16091

               1      -     51
UN16091        --> AAAAAAGTGAGGATAATCACTAATCAGTGAAAATTTATTTGAAATCTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD557836       <-- ..................gaTAATCAATGAAAATTTATTTGAAATCTGCA
FD543538       <-- ..................................................
EX771071       <-- ..................................................
EX764429       <-- ..................................................
FD539347       --> AAAAAAGTGAGGATAATCACTAATCAGTGAAAAATTATTTGAAATCTGCA
EV574401       --> ........................caaTGAAGATTTATTTGAAATCTGCA
FD552711       --> ..................................................
FD537827       --> ..................................................
FD967833       --> ..................................................
EX775178       --> ..................................................

               51     -    101
UN16091        --> TGAAAAAGGGAAACATGTGACAATGTTT-GAAAATATTATAGCAGATGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD557836       <-- TGAAAAAGGGAAACATGTGACAATGTTT-GAAAATATTATAGCAGATGAA
FD543538       <-- .....................................TATAGCAGATGAA
EX771071       <-- ..................................................
EX764429       <-- ..................................................
FD539347       --> TAAGGAAGGAAAACATGTAACAATGTTTTGAAAATATAATAGCAGATGAA
EV574401       --> TGAAAAAGGGAAACATGTGACAATGTTT-GAAAATATTATAGCAGATGAA
FD552711       --> .GAAAAAGGGAAACATGTGACAATGTTT-GAAAATATTATAGCAGATGAA
FD537827       --> ...........AACATGTAACAATGTTTTGAAAATATAATAGCAGATGAA
FD967833       --> ..................................................
EX775178       --> ..................................................

               101    -    151
UN16091        --> ACAAATCGTTCTCAATACGCAAACGTTCTCTCTTTTATTCCTTCAACTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD557836       <-- ACAAATTGTTCTCAAAACGCAAACGTTCTCTCTTTTATTCCTTCAACTCT  Raphanus raphanistrum subsp. landra
FD543538       <-- ACAAATCGTTCTCAATACGCAAACGTTCTCTCATTTATTC-TTCAACTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX771071       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX764429       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539347       --> ACAAATCGTTCTCAATACGCAAACGTTCTCTCATTTATTCCTTCAACTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV574401       --> ACAAATCGTTCTCAAAACGCAAACGTTCTCTCTTTTATTCCTTCAACTCT  Raphanus raphanistrum subsp. landra
FD552711       --> ACAAATCGTTCTCAAAACGCAAACGTTCTCTCTTTTATTCCTTCAACTCT  Raphanus raphanistrum subsp. landra
FD537827       --> ACAAATCATTCTCAATACGCAAACGTTCTCTCATTTATTCCTTCAACTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967833       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX775178       --> ..................................................  Raphanus raphanistrum subsp. landra

               151    -    201
UN16091        --> CACAAACCCACCAGATTAGACACTTATGACTAAGTCGTCGAATGTGTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD557836       <-- CACAAACCCACCAGATTAGACACTTATGACTAAGTCGTCGAATGTTTTCT  Raphanus raphanistrum subsp. landra
FD543538       <-- CACAAACCCACCAGATTAGACACTTATGACTAAGTCGTCGAATGTGTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX771071       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX764429       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539347       --> CACAAACCCACCAGATTAGACACTTATGACTAAGTCGTCGAATGTGTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV574401       --> CACAAACCCACCAGATTAGACACTTATGACTAAGTCGTCGAATGTTTTCT  Raphanus raphanistrum subsp. landra
FD552711       --> CACAAACCCACCAGATTAGACACTTATGACTAAGTCGTCGAATGTTTTCT  Raphanus raphanistrum subsp. landra
FD537827       --> CACAAACCCACCAGATTAGACACTTATGACTAAGTCGTCGAATGTGTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967833       --> .........................................ATGTGTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX775178       --> ..................................................  Raphanus raphanistrum subsp. landra

               201    -    251
UN16091        --> TAAGCGCCGAGTCTTGTTTTGAGCTCTTCCGCAACTGCATCGATGAACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD557836       <-- TAAGCGCCGAGTCTTGTTTTGAGCTCTTCCGCAACTGCATCGATGAACTC
FD543538       <-- TAAGCGCCGAGTCTTGTTTTGAGCTCTTCCGCAACTGCATCGATGAACTC
EX771071       <-- ..................................................
EX764429       <-- ..................................................
FD539347       --> TAAGCGCCGAGTCTTGTTTTGAGCTCTTCCGCAACTGCATCGATGAACTC
EV574401       --> TAAGCGCCGAGTCTTGTTTTGAGCTCTTCCGCAACTGCATCGATGAACTC
FD552711       --> TAAGCGCCGAGTCTTGTTTTGAGCTCTTCCGCAACTGCATCGATGAACTC
FD537827       --> TAAGCGCCGAGTCTTGTTTTGAGCTCTTCCGCAACTGCATCGATGAACTC
FD967833       --> TAAGCGCCGAGTCTTGTTTTGAGCTCTTCCCCAACTGCATCGATGAACTC
EX775178       --> ..................................................

               251    -    301
UN16091        --> CTCCGTGTTGAGGTAAGTATCCCTCGAGAGCTTTGAGCCGTGAATGATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD557836       <-- CTCCGTGTTGAGGTAAGTATCCCTCGAGAGCTTTGAGCCGTGAATGATGA
FD543538       <-- CTCCGTGTTGAGGTAAGTATCCCTCGAGAGCTTTGAGCCGTGAATGATGG
EX771071       <-- .....................................CCGTGAATGATGA
EX764429       <-- ..................................................
FD539347       --> CTCCGTGTTGAGGTAAGTATCCCTCGAGAGCTTTGAGCCGTGAATGATGG
EV574401       --> CTCCGTGTTGAGGTAAGTATCCCTCGAGAGCTTTGAGCCGTGAATGATGA
FD552711       --> CTCCGTGTTGAGGTAAGTATCCCTCGAGAGCTTTGAGCCGTGAATGATGA
FD537827       --> CTCCGTGTTGAGGTAAGTATCCCTCGAGAGCTTTGAGCCGCGAATGATGA
FD967833       --> CTCCGTGTTGAGGTAAGTATCCCTCGAGAGCTTTGAGCCGTGAATGATGA
EX775178       --> ..................................................

               301    -    351
UN16091        --> GCGCAAGATCTTTGGTCATTTTTCCAGACTCCACTGTACCAACACAAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD557836       <-- GCGCAAGATCTTTGGTCATTTTTCCAGACTCCACTGTACCAACACAAGCA
FD543538       <-- GCGCAAGATCTTTGGTCATTTTTCCAGACTCCACTGTACCAACACAAGCA
EX771071       <-- GCGCAAGATCTTTGGTCATTTTTCCAGACTCCACTGTACCAACACAAGCA
EX764429       <-- ..................................................
FD539347       --> GCGCAAGATCTTTGGTCATTTTTCCAGACTCCACTGTACCAACACAAGCA
EV574401       --> GCGCAAGATCTTTGGTCATTTTTCCAGACTCCACTGTACCAACACAAGCG
FD552711       --> GCGCAAGATCTTTGGTCATTTTTCCAGACTCCACTGTACCAACACAAGCA
FD537827       --> GCGCAAGATCTTTGGTCATTTTTCCAGACTCCACTGTACCAACACAAGCA
FD967833       --> GCGCAAAATCTTTGGTCATTTTTCCAGACTCCACTGTACCAACACAAGCA
EX775178       --> ..................................................

               351    -    401
UN16091        --> GCTTCGAGCTTCTCAGTAAACTCCAAGAGTTTTGAGTTGTCATCCAGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD557836       <-- GCTTCGAGCTTCTCAGTAAACTCCAAGAGTTTTGAGTTGTCATCCAGCTT
FD543538       <-- GCTTCGAGCTTCTCAGTAAACTCCAAGAGTTTTGAGTTGTCATCCAGCTT
EX771071       <-- GCTTCGAGCTTCTCAGTAAACTCCAAGAGTTTTGAGTTGTCATCCAGCTG
EX764429       <-- ..................................................
FD539347       --> GCTTCGAGCTTCTCAGTAAACTCCAAGAGTTTTGAGTTGTCATCCAGCTT
EV574401       --> GCTTCGAGCTTCTCAGTAAACTCCAAGAGTTTTGAGTTGTCATCCAGCTT
FD552711       --> GCTTCGAGCTTCTCAGTAAACTCCAAGAGTTTTGAGTTGTCATCCAGCTT
FD537827       --> GCTTTGAGCTTCTCAGTAAACTCCAAGAGTTTTGAGTTGTCATCCAGCTT
FD967833       --> GCTTCGAGCTTCTCAGTAAACTCCAAAAGTTTTGAGTTGTCATCCAGCTT
EX775178       --> ..................................................

               401    -    451
UN16091        --> AGCTCTGTGTGCAAGTCCACGAGTCCAGGCAAAGATGGAGGCTATGCTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD557836       <-- AGCTCTGTGTGCAAGTCCACGAGTCCAGGCAAAGATGGAGGCTATGCTGT  Raphanus raphanistrum subsp. landra
FD543538       <-- AGCTCTGTGTGCAAGTCCACGAGTCCAAGCAAAGATGGAGGCTATGCTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX771071       <-- AGCTCTGTGTGCAAGTCCACGAGTCCAGGCAAAGATGGAGGCTATGCTGT  Raphanus raphanistrum subsp. landra
EX764429       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539347       --> AGCTCTGTGTGCAAGTCCACGAGTCCAAGCAAAGATGGAGGCTATGCTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV574401       --> AGCTCTGTGTGCAAGTCCACGAGTCCAGGCAAAGATGGAGGCTATGCTGT  Raphanus raphanistrum subsp. landra
FD552711       --> AGCTCTGTGTGCAAGTCCACGAGTCCAGGCAAAGATGGAGGCTATGCTGT  Raphanus raphanistrum subsp. landra
FD537827       --> AGCTCTGTGTGCAAGTCCACGAGTCCAAGCAAAGATGGAGGCTATGCTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967833       --> AACTCTGTGGGCAAGTCCACGAGTCCAAGCAAAAATGGAGGCTATGCTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX775178       --> ...TCTGTGTGCAAGTCCACGAGTCCAGGCAAAAATGGAGGCTATGCTGT  Raphanus raphanistrum subsp. landra

               451    -    501
UN16091        --> TTGTGCTGGTCTCGCCACCTTTCTGGTGAACCCTGTAGTGACGGGTAACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD557836       <-- TTGTGCTGGTCTCGCCACCTTTCTGGTGAACCCTGTAGTGACGGGTAACG  Raphanus raphanistrum subsp. landra
FD543538       <-- TTGTGCTGGTCTCTCCACCTTTCTGGTGAACCCTGTAGTGACGGGTAACG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX771071       <-- TTGTGCTGGTCTCGCCACCTTTATGGTGAACCCTGTAGTGACGGGTAACG  Raphanus raphanistrum subsp. landra
EX764429       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539347       --> TTGTGCTGGTCTCTCCACCTTTCTGGTGAACCCTGTAGTGACGGGTAACG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV574401       --> TTGTGCTGGTCTCGCCACCTTTCTGGTGAACCCTGTAGTGACGGGTAACG  Raphanus raphanistrum subsp. landra
FD552711       --> TTGTGCTGGTCTCGCCACCTTTCTGGTGAACCCTGTAGTGACGGGTAACG  Raphanus raphanistrum subsp. landra
FD537827       --> TTGTGCTGGTCTCTCCACCTTTCTGGTGAACCCTGTAGTGACGGGTAACG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967833       --> TTGTGCTGGTCTCTCCACCTTTCTGGGGAACCCTGTAGTGACGGGTAACG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX775178       --> TTGTGCTGGTCTCGCCACCTTTCTGGTGAACCCTGTAGTGACGGGTAACG  Raphanus raphanistrum subsp. landra

               501    -    551
UN16091        --> GTACCATGGGCTGCTTCAGCTTCAATTGTCTTACCATCCGGGCAGACCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD557836       <-- GTACCATGGGCTGCTTCAGCTTCAATTGTCTTACCATCCGGGCAGACCAG  Raphanus raphanistrum subsp. landra
FD543538       <-- GTACCATGGGCTGCTTCAGCTTCAATTGTCTTCCCATCCGGGCAGACCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX771071       <-- GTACCATGGGCTGCTTCAGCTTCAATTGTCTTACCATCCGGGCAGACCAG  Raphanus raphanistrum subsp. landra
EX764429       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539347       --> GTACCATGGGCTGCTTCAGCTTCAATTGTCTTCCCATCCGGGCAGACCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV574401       --> GTACCATGGGCTGCTTCAGCTTCAATTGTCTTACCATCCGGGCAGACCAG  Raphanus raphanistrum subsp. landra
FD552711       --> GTACCATGGGCTGCTTCAGCTTCAATTGTCTTACCATCCGGGCAGACCAG  Raphanus raphanistrum subsp. landra
FD537827       --> GTACCATGGGCTGCTTCAGCTTCAATTGTCTTCCCATCCGGGCAGACCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967833       --> GTACCATGGGCTGCTTCAGCTTCAATTGTCTTCCCATCCGGGCAGACCAa  Raphanus raphanistrum subsp. raphanistrum (MS)
EX775178       --> GTACCATGGGCTGCTTCAGCTTCAATTGTCTTACCATCCGGGCAGACCAG  Raphanus raphanistrum subsp. landra

               551    -    601
UN16091        --> AACAGATGTCATCAATCCAAGTGACCCGAATCCTTGTGCAAGGAAATCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD557836       <-- AACAGATGTCATCAATCCAAGTGACCCGAATCCTTGTGCAAGGAAATCGC  Raphanus raphanistrum subsp. landra
FD543538       <-- AACAGATGTCATCAATCCAAGTGACCCGAATCCTTGTGCCAGGAAATCGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX771071       <-- AACAGATGTCATCAATCCAAGTGACCCGAATCCTTGTGCAAGGAAATCGC  Raphanus raphanistrum subsp. landra
EX764429       <-- ................................................GC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539347       --> AACAGATGTCATCAATCCAAGTGACCCGAATCCTTGTGCCAGGAAATCGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV574401       --> AACAGATGTCATCAATCCAAGTGACCCGAATCCTTGTGCAAGGAAATCGC  Raphanus raphanistrum subsp. landra
FD552711       --> AACAGATGTCATCAATCCAAGTGACCCGAATCCTTGTGCAAGGAAATCGC  Raphanus raphanistrum subsp. landra
FD537827       --> AACAGATGTCATCAATCCAAGTGACCCGAATCCTTGTGTCAGGAAATCGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967833       --> aa................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX775178       --> AACAGATGTCATCAATCCAAGTGACCCGAATCCTTGTGCAAGGAAATCGC  Raphanus raphanistrum subsp. landra

               601    -    651
UN16091        --> TCTGGACATCACCATCATAGTTTTTGCATGCCCACACATAGCCTCCCTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD557836       <-- TCc...............................................
FD543538       <-- TCTGGACATCACCATCATAGTTTTTGCATGCCCACACATAGCCTCCCTCG
EX771071       <-- ..................................................
EX764429       <-- TCTGGACATCACCATCATAGTTTT-GCATGCCCACACATAGCCTCCCTCG
FD539347       --> TCTGGACATCACCATCATAGTTTTTGCATGCCCACACATAGCCTCCCTCG
EV574401       --> TCTGGACATCACCATCATAGTTTTTGCATGCCCACACATAGCCTCCCTCG
FD552711       --> TCTGGACATCGCCATCATAGTTTTTGCATGCCCACACATAGCCTCCCTCG
FD537827       --> TCTGGACATCACCATCATAGTTTTTGCATGCCCACACATAGCCTCCCTCG
FD967833       --> ..................................................
EX775178       --> TCTGGACATCACCATCATAGTTTTTGCATGCCCACA..............

               651    -    701
UN16091        --> CTCTTAAGAGCGTAAGCCACCATATCATCAATGAGACGGTGCTCATACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD557836       <-- ..................................................
FD543538       <-- CTCTTAAGAGCGTAAGCCACCATATCATCAATGAGACGGTGCTCATACCA
EX771071       <-- ..................................................
EX764429       <-- CTCTTAAGAGCGTAAGCCACCATATCATCAATGAGACGGTGCTCATACCA
FD539347       --> CTCTTAAGAGCGTAAGCCACCATATCATCAATGAGACG-TGCTCATACCA
EV574401       --> CTCTTAAGAGCGTAAGCCACCATA--ATCAATGAGACGGTGCTCGTACCA
FD552711       --> CTCTTAAGAGCGTAAGCCACCATATCATCAATGAGACGGTGCTCGTACCA
FD537827       --> CTCTTAAGAGCGTAAGCCACCATATCATCAATGAGACGGTGCTCATACCA
FD967833       --> ..................................................
EX775178       --> ..................................................

               701    -    751
UN16091        --> TATTCCAGCAGCTTCATACTTTGACTTCCAGCTGGCTTCATACACTTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD557836       <-- ..................................................
FD543538       <-- TATTCCAGCAGCTTCATACTTTGACTTCCAGCTGGCTTCATACACTTCCT
EX771071       <-- ..................................................
EX764429       <-- TATTCCAGCAGCTTCATACTTTGACTTCCAGCTGGCTTCATACACTTCCT
FD539347       --> TATTCCAGCAGCTTCATACTTTGACTTCCAGCTGGCTTCATACACTTCCT
EV574401       --> TATTCCAGCAGCCTCATACTTTGACTTCCAGATGGCTTCATACACTTCCT
FD552711       --> TATTCCAGCAGCCTCATACTTTGACTTCCAGCTGGCTTCATACACTTCCT
FD537827       --> TATTCCGGCAGCTTCATACTTTGACTTCCAGCTGGCTTCATAC.......
FD967833       --> ..................................................
EX775178       --> ..................................................

               751    -    801
UN16091        --> GGAAGATGTCTTTGAATCTGCCATCGTATTTCTTAAGAATGGTGTTCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD557836       <-- ..................................................
FD543538       <-- GGAAGATGTCTTTGAATCTGCCATCGTATTTCTTAAGAATGGTGTTCTTT
EX771071       <-- ..................................................
EX764429       <-- GGAAGATGTCTTTGAATCTGCCATCGTATTTCTTAAGAATGGTGTTCTTT
FD539347       --> GGAAGATGTCTTTGAATCTGCCATCGTATTTC..................
EV574401       --> GGAAGATGTCTTTGAATCTGCCATCGTATTTCTTAAGAATGGTGTTCTTT
FD552711       --> GGAAGATGTCTTTGAATCTGCCATCGTATTTCTTAAGAATGGTGTTCTTT
FD537827       --> ..................................................
FD967833       --> ..................................................
EX775178       --> ..................................................

               801    -    851
UN16091        --> GTGCTAAGATAAAGTGGCCACTTTTTCTCATAAGCAGTGTTCATCGATGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD557836       <-- ..................................................
FD543538       <-- GTGCTAAGATAAAGc...................................
EX771071       <-- ..................................................
EX764429       <-- GTGCTAAGATAAAGTGGCCACTTTTTCTCATAAGCAGTGTTCATCGATGC
FD539347       --> ..................................................
EV574401       --> GTGCTAAGATAAAGTGGCCACTTTTTCTCATGAGCAGTGTTCATCGATGC
FD552711       --> GTGCTAAGATAAAGTGGCCACTTTTTCTCATAAGCAGTGTTCATCGATGC
FD537827       --> ..................................................
FD967833       --> ..................................................
EX775178       --> ..................................................

               851    -    901
UN16091        --> GTCCGCAAAAGCACGGATGGACTCATCAGTGTTGTACATGGCCATAGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD557836       <-- ..................................................
FD543538       <-- ..................................................
EX771071       <-- ..................................................
EX764429       <-- GTCCGCAAAAACACGGATGGACTCATCAGTGTTGTACATGGCCATAGCAA
FD539347       --> ..................................................
EV574401       --> GTCCGCAAAAGCACGGATGGACTCATCAGTGTTGTA..............
FD552711       --> GTCCGCAAA-GCACGGATGGACTCATCAGTGT-GTACATGGCCATAGCAc
FD537827       --> ..................................................
FD967833       --> ..................................................
EX775178       --> ..................................................

               901    -    951
UN16091        --> CACCACCTTCACCGGTAAATGTAAACACTTCAGTTTCAGTTTTTCCATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD557836       <-- ..................................................
FD543538       <-- ..................................................
EX771071       <-- ..................................................
EX764429       <-- CACCACCTTCACCGGTAAATGTAAACACTTCAGTTTCAGTTTTTCCATCT
FD539347       --> ..................................................
EV574401       --> ..................................................
FD552711       --> a.................................................
FD537827       --> ..................................................
FD967833       --> ..................................................
EX775178       --> ..................................................

               951    -   1001
UN16091        --> TTTCCCTCGAAGGTCATAGTCAGTCTTCCAGGTCCCTTGATAACAGCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD557836       <-- ..................................................
FD543538       <-- ..................................................
EX771071       <-- ..................................................
EX764429       <-- TTTCCCTCGAAGGTCATAGTCAGTCTTCCAGGTCCCTTGATAACAGCATC
FD539347       --> ..................................................
EV574401       --> ..................................................
FD552711       --> ..................................................
FD537827       --> ..................................................
FD967833       --> ..................................................
EX775178       --> ..................................................

               1001   -   1051
UN16091        --> AGTGGCACGGTACTGATCACCAAAAGCATGCCTTCCAATGCAGATGGTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD557836       <-- ..................................................
FD543538       <-- ..................................................
EX771071       <-- ..................................................
EX764429       <-- AGTGGCACGGTACTGATCACCAAAAGCATGCCTTCCAATGCAGATGGTGG
FD539347       --> ..................................................
EV574401       --> ..................................................
FD552711       --> ..................................................
FD537827       --> ..................................................
FD967833       --> ..................................................
EX775178       --> ..................................................

               1051   -   1101
UN16091        --> CACACTTGATCGCCACATTATACTTCTTAGTGGCTTCAGCACTTTCAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD557836       <-- ..................................................
FD543538       <-- ..................................................
EX771071       <-- ..................................................
EX764429       <-- CACACTTGATCGCCACATTATACTTCTTAGTGGCTTCAGCACTTTCAATA
FD539347       --> ..................................................
EV574401       --> ..................................................
FD552711       --> ..................................................
FD537827       --> ..................................................
FD967833       --> ..................................................
EX775178       --> ..................................................

               1101   -   1151
UN16091        --> GTAACTTTGTCATCGGCAGCATCACGGTGAGGAAGACCAAGGTCGAAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD557836       <-- ..................................................
FD543538       <-- ..................................................
EX771071       <-- ..................................................
EX764429       <-- GTAACTTTGTCATCGGCAGCATCACGGTGAGGAAGACCAAGGTCGAAGTA
FD539347       --> ..................................................
EV574401       --> ..................................................
FD552711       --> ..................................................
FD537827       --> ..................................................
FD967833       --> ..................................................
EX775178       --> ..................................................

               1151   -   1201
UN16091        --> CTTGATATCCAACTCCACAAAAGGAGTGATAAGCTTGTCCTTGATGGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD557836       <-- ..................................................
FD543538       <-- ..................................................
EX771071       <-- ..................................................
EX764429       <-- CTTGATATCCAACTCCACAAAAGGAGTGATAAGCTTGTCCTTGATGGACT
FD539347       --> ..................................................
EV574401       --> ..................................................
FD552711       --> ..................................................
FD537827       --> ..................................................
FD967833       --> ..................................................
EX775178       --> ..................................................

               1201   -   1251
UN16091        --> TCCAGATAACTCGGGTCATTTCATCACCATCCATCTCGACGATGGGATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD557836       <-- ..................................................
FD543538       <-- ..................................................
EX771071       <-- ..................................................
EX764429       <-- TCCAGATAACTCGGGTCATTTCATCACCATCCATCTCGACGATGGGATTT
FD539347       --> ..................................................
EV574401       --> ..................................................
FD552711       --> ..................................................
FD537827       --> ..................................................
FD967833       --> ..................................................
EX775178       --> ..................................................

               1251   -   1301
UN16091        --> GCAACCTTGATCTTCTCAAACGCCATTGTTTTTTTTTTCGTTAGAAAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD557836       <-- ..................................................
FD543538       <-- ..................................................
EX771071       <-- ..................................................
EX764429       <-- GCAACCTTGATCTTCTCAAACGCCATTGTTTTTTTTTTCGTTAGAAAGAC
FD539347       --> ..................................................
EV574401       --> ..................................................
FD552711       --> ..................................................
FD537827       --> ..................................................
FD967833       --> ..................................................
EX775178       --> ..................................................