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Alignment for radish unigene UN16099

               1      -     51
UN16099        --> GGATCACTGTTCCTTTAAGACCAGTGCTCTTCCTTTTCTTCTCCATATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943588       <-- ..................................................
FD984898       <-- ..................................................
FY440980       <-- ..................................................
FD983817       <-- ..................................................
FD555840       <-- ..................................................
FD935607       <-- ..................................................
EV572190       <-- ..................................................
EW721281       <-- ..................................................
EY927528       <-- ..................................................
EY936701       <-- ..................................................
EX901418       <-- ..................................................
EV567212       --> GGATCAATGTTCCTTTGAGACCAGTGCTCTTCCTTTTCTTCTCCATATAA
FD971240       --> GGATCACTGTTCCTTTAAGACCAGTGCTCTTCCTTTTCTTCTCCATATAA
FD973573       --> GGATCACTGTTCCTTTAAGACCAGTGCTCTTCCTTTTCTTCTCCATATAA
EY941046       --> ..................................................
FD947691       --> ..................................................
EY931629       --> ..................................................
FD989071       --> ..................................................
EV528570       --> ..................................................
EW717250       --> ..................................................
FD939495       --> ..................................................
FD560253       --> ..................................................
FD987852       --> ..................................................
EY907707       --> ..................................................
EX897696       --> ..................................................

               51     -    101
UN16099        --> ACCACATATCCTCGCCTCCATATCTTAACAATTTCTCATAGAACCCTAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943588       <-- ..................................................
FD984898       <-- ..................................................
FY440980       <-- ..................................................
FD983817       <-- ..................................................
FD555840       <-- ..................................................
FD935607       <-- ..................................................
EV572190       <-- ..................................................
EW721281       <-- ..................................................
EY927528       <-- ..................................................
EY936701       <-- ..................................................
EX901418       <-- ..................................................
EV567212       --> ACCACATATCCTCGCCTCCATATCTTAACAATTTCTCATAGAACCCTAAA
FD971240       --> ACCACATATCCTCGCCTCCATATCTTAACAATTTCTCATAGAACCCTAAA
FD973573       --> ACCACATATCCTCGCCTCCATATCTTAACAATTTCTCATAGAACCCTAAA
EY941046       --> ...............ggCCATATCTTAACAATTTCTCATAGAACCCTAAA
FD947691       --> .................ggATATCTTAACAATTTCTCATAGAACCCTAAA
EY931629       --> ........................ggAACAATTTCTCATCGAACCCTAAA
FD989071       --> ........................ggAACAATTTCTCATAGAACCCTAAA
EV528570       --> ...........................ggAATTTCTCATAGAACCCTAAA
EW717250       --> ...........................ggAATTTCTCATAGAACCCTAAA
FD939495       --> ...........................ggAATTTCTCATAGAACCCTAAA
FD560253       --> ...................................ggATAGAACCCTAAA
FD987852       --> ...................................ggATAGAACCCTAAA
EY907707       --> ..................................................
EX897696       --> ..................................................

               101    -    151
UN16099        --> AACTGAGAAAAGAGAGCTAGAGAGAGAAAGATGGGAAGAGGGAAGATAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943588       <-- .ACTGAGAAAAGAGAGCTAGAGAGAGAAAGATGG-AAG-GGGAAGATAGA  Raphanus sativus cv Early Scarlet Globe
FD984898       <-- ...............GCTAGAGAGAGAAAGATGGGAAGAGGGAAGATAGA  Raphanus raphanistrum subsp. landra
FY440980       <-- .............................GATGGGAAGGGGGAAGATAGA  Raphanus sativus cv GSK3-1
FD983817       <-- ............................................GATAGA  Raphanus raphanistrum subsp. landra
FD555840       <-- .............................................ATAGA  Raphanus raphanistrum subsp. landra
FD935607       <-- ..................................................  Raphanus sativus var. oleiformis
EV572190       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW721281       <-- ..................................................  Raphanus sativus var. oleiformis
EY927528       <-- ..................................................  Raphanus sativus var. oleiformis
EY936701       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX901418       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV567212       --> AACTGAGAAAAGAGAGCTAGAGAGAGAAAGATGGGAAGAGGGAAGATAGA  Raphanus raphanistrum subsp. landra
FD971240       --> AACTGAGAAAAGAGAGCTAGAGAGAGAAAGATGGGAAGAGGGAAGATAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973573       --> AACTGAGAAAAGAGAGCTAGAGAGAGAAAGATGGGAAGAGGGAAGATAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY941046       --> A-CTGAGAAAAGAGAGCTAGAGAGAGAAAGATGGGAAGGGGGAAGATAGA  Raphanus sativus cv Early Scarlet Globe
FD947691       --> A-CTGAGAAAAGAGAGCTAGAGAGAGAAAGATGGGAAGGGGGAAGATAGA  Raphanus sativus cv Early Scarlet Globe
EY931629       --> --CTGAGAAAAGAGAGCTAGAGAGAGAAAGATGGGAAGGGGGAAGATAGA  Raphanus sativus var. oleiformis
FD989071       --> AACTGAGAAAAGAGAGCTAGAGAGAGAAAGATGGGAAGAGGGAAGATAGA  Raphanus raphanistrum subsp. landra
EV528570       --> AACTGAGAAAAGAGAGCTAGAGAGAGAAAGATGGGAAGAGGGAAGATAGA  Raphanus raphanistrum subsp. maritimus
EW717250       --> A-CTGAGAAAAGAGAGCTAGAGAGAGAAAGATGGGAAGGGGGAAGATAGA  Raphanus sativus var. oleiformis
FD939495       --> A-CTGAGAAAAGAGAGCTAGAGAGAGAAAGATGGGAAGGGGGAAGATAGA  Raphanus sativus var. oleiformis
FD560253       --> AACTGAGAAAAGAGAGCTAGAGAGAGAAAGATGGGAAGAGGGAAGATAGA  Raphanus raphanistrum subsp. landra
FD987852       --> AACTGAGAAAAGAGAGCTAGAGAGAGAAAGATGGGAAGAGGGAAGATAGA  Raphanus raphanistrum subsp. landra
EY907707       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX897696       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               151    -    201
UN16099        --> GATAAAGAGGATAGAGAACGTAAACAACAGAGTGGTGACGTTCTCAAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943588       <-- GATAAAGAGGATAGAGAACGTAAACAACAGAGTGGTGACGT-CTCAAAGA  Raphanus sativus cv Early Scarlet Globe
FD984898       <-- GATAAAGAGGATAGAGAACGTAAACAACAGAGTGGTGACGTTCTCAAAGA  Raphanus raphanistrum subsp. landra
FY440980       <-- GATAAAGAGGATAGAGAACGTAAACAACAGAGTGGTGACGTTCTCAAAGA  Raphanus sativus cv GSK3-1
FD983817       <-- GATAAAGAGGATAGAGAACGTAAACAACAGAGTGGTGACGTTCTCAAAAA  Raphanus raphanistrum subsp. landra
FD555840       <-- GATAAAGAGGATAGAGAACGTAAACAACAGAGTGGTGACGTTCTCAAAAA  Raphanus raphanistrum subsp. landra
FD935607       <-- ..................................................  Raphanus sativus var. oleiformis
EV572190       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW721281       <-- ..................................................  Raphanus sativus var. oleiformis
EY927528       <-- ..................................................  Raphanus sativus var. oleiformis
EY936701       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX901418       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV567212       --> GATAAAGAGGATAGAGAACGTAAACAACAGAGTGGTGACGTTCTCAAAGA  Raphanus raphanistrum subsp. landra
FD971240       --> GATAAAGAGGATAGAGAACGTAAACAACAGAGTGGTGACGTTCTCAAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973573       --> GATAAAGAGGATAGAGAACGTAAACAACAGAGTGGTGACGTTCTCAAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY941046       --> GATAAAGAGGATAGAGAACGTAAACAACAGAGTGGTGACGTTCTCAAAGA  Raphanus sativus cv Early Scarlet Globe
FD947691       --> GATAAAGAGGATAGAGAACGTAAACAACAGAGTGGTGACGTTCTCAAAGA  Raphanus sativus cv Early Scarlet Globe
EY931629       --> GATAAAGAGGATAGAGAACGTAAACAACAGAGTGGTGACGTTCTCAAAGA  Raphanus sativus var. oleiformis
FD989071       --> GATAAAGAGGATAGAGAACGTAAACAACAGAGTGGTGACGTTCTCAAAGA  Raphanus raphanistrum subsp. landra
EV528570       --> GATAAAGAGGATAGAGAACGTAAACAACAGAGTGGTGACGTTCTCAAAGA  Raphanus raphanistrum subsp. maritimus
EW717250       --> GATAGAGAGGATAGAGAACGTAAACAACAGAGTGGTGACGTTCTCAAAGA  Raphanus sativus var. oleiformis
FD939495       --> GATAAAGAGGATAGAGAACGTAAACAACAGAGTGGTGACGTTCTCAAAGA  Raphanus sativus var. oleiformis
FD560253       --> GATAAAGAGGATAGAGAACGTAAACAACAGAGTGGTGACGTTCTCAAAAA  Raphanus raphanistrum subsp. landra
FD987852       --> GATAAAGAGGATAGAGAACGTAAACAACAGAGTGGTGACGTTCTCAAAAA  Raphanus raphanistrum subsp. landra
EY907707       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX897696       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               201    -    251
UN16099        --> GGAGGAATGGGTTGGTTAAGAAGGCGAAAGAGATCACAGTTCTCTGTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943588       <-- GGAGGAATGGGTTGGTTAAGAAGGCAAAAGAGATCACAGTTCTCTGTGAT
FD984898       <-- GGAGGAATGGGTTGGTTAAGAAGGCGAAAGAAATCACAGTTCTCTGTGAT
FY440980       <-- GGAGGAATGGGTTGGTTAAGAAGGCGAAAGAGATCACAGTTCTCTGTGAT
FD983817       <-- GGAGGAATGGGTTGGTTAAGAAGGCGAAAGAGATCACAGTTCTCTGTGAT
FD555840       <-- GGAGGAATGGGTTGGTTAAGAAGGCGAAAGAGATCACAGTTCTCTGTGAT
FD935607       <-- ........GGGTTGGTTAAGAAGGCGAAAGAGATCACAGTTCTCTGTGAT
EV572190       <-- ............TGGTTAAGAAGGCGAAAGAAATCACAGTTCTCTGTGAT
EW721281       <-- ................TAAGAAGGCGAAAGAGATCACAGTTCTCTGTGAT
EY927528       <-- ..................................................
EY936701       <-- ..................................................
EX901418       <-- ..................................................
EV567212       --> GGAGGAATGGGTTGGTTAAGAAGGCGAAAGAAATCACAGTTCTCTGTGAT
FD971240       --> GGAGGAATGGGTTGGTTAAGAAGGCGAAAGAGATCACAGTTCTCTGTGAT
FD973573       --> GGAGGAATGGGTTGGTTAAGAAGGCGAAAGAGATCACAGTTCTCTGTGAT
EY941046       --> GGAGGAATGGGTTGGTTAAGAAGGCGAAAGAGATCACAGTTCTCTGTGAT
FD947691       --> GGAGGAATGGGTTGGTTAAGAAGGCAAAAGAGATCACAGTTCTCTGTGAT
EY931629       --> GGAGGAATGGGTTGGTTAAGAAGGCGAAAGAGATCACAGTTCTCTGTGAT
FD989071       --> GGAGGAATGGGTTGGTTAAGAAGGCGAAAGAAATCACAGTTCTCTGTGAT
EV528570       --> GGAGGAATGGGTTGGTTAAGAAGGCGAAAGAAATCACAGTTCTCTGTGAT
EW717250       --> GGAGGAATGGGTTGGTTAAGAAGGCGAAAGAGATCACAGTTCTCTGTGAT
FD939495       --> GGAGGAATGGGTTGGTTAAGAAGGCGAAAGAGATCACAGTTCTCTGTGAT
FD560253       --> GGAGGAATGGGTTGGTTAAGAAGGCGAAAGAGATCACAGTTCTCTGTGAT
FD987852       --> GGAGGAATGGGTTGGTTAAGAAGGCGAAAGAGATCACAGTTCTCTGTGAT
EY907707       --> ..................................................
EX897696       --> ..................................................

               251    -    301
UN16099        --> GCAAAAGTTGCTCTCATAGTCTTTGCAAGTAATGGTAAGATGACTGATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943588       <-- GCAAAAGTTGCTCTCATAGTCTTTGCAAGTAATGGTAAGATGACTGATTA
FD984898       <-- GCAAAAGTTGCTCTCATAGTCTTTGCAAGTAATGGTAAGATGACTGATTA
FY440980       <-- GCAAAAGTTGCTCTCATAGTCTTTGCAAGTAATGGTAAGATGACTGATTA
FD983817       <-- GCAAAAGTTGCTCTCATAGTCTTTGCAAGTAATGGTAAGATGACTGATTA
FD555840       <-- GCAAAAGTTGCTCTCATAGTCTTTGCAAGTAATGGTAAGATGACTGATTA
FD935607       <-- GCAAAAGTTGCTCTCATAGTCTTTGCAAGTAATGGTAAGATGACTGATTA
EV572190       <-- GCAAAAGTTGCTCTCATGGTCTTTGCAAGTAATGGTAAGATGACTGATTA
EW721281       <-- GCAAAAGTTGCTCTCATAGTCTTTGCAAGTAATGGTAAGATGACTGATTA
EY927528       <-- ..................................................
EY936701       <-- ..................................................
EX901418       <-- ..................................................
EV567212       --> GCAAAAGTTGCTCTCATGGTCTTTGCAAGTAATGGTAAGATGACTGATTA
FD971240       --> GCAAAAGTTGCTCTCATAGTCTTTGCAAGTAATGGTAAGATGACTGATTA
FD973573       --> GCAAAAGTTGCTCTCATAGTCTTTGCAAGTAATGGTAAGATGACTGATTA
EY941046       --> GCAAAAGTTGCTCTCATAGTCTTTGCAAGTAATGGTAAGATGACTGATTA
FD947691       --> GCAAAAGTTGCTCTCATAGTCTTTGCAAGTAATGGTAAGATGACTGATTA
EY931629       --> GCAAAAGTTGCTCTCATAGTCTTTGCAAGTAATGGTAAGATGACTGATTA
FD989071       --> GCAAAAGTTGCTCTCATAGTCTTTGCAAGTAATGGTAAGATGACTGATTA
EV528570       --> GCAAAAGTTGCTCTCATAGTCTTTGCAAGTAATGGTAAGATGACTGATTA
EW717250       --> GCAAAAGTTGCTCTCATAGTCTTTGCAAGTAATGGTAAGATGACTGATTA
FD939495       --> GCAAAAGTTGCTCTCATAGTCTTTGCAAGTAATGGTAAGATGACTGATTA
FD560253       --> GCAAAAGTTGCTCTCATAGTCTTTGCAAGTAATGGTAAGATGACTGATTA
FD987852       --> GCAAAAGTTGCTCTCATAGTCTTTGCAAGTAATGGTAAGATGACTGATTA
EY907707       --> ................................................gA
EX897696       --> ..................................................

               301    -    351
UN16099        --> TTGTTGTCCTTCCATGGATCTTGGTGCTATGTTGGACCAATACCAGAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943588       <-- TTGTTGTCCTTCCATGGATCTTGGTGCTATGTTGGACCAATACCAGAAGC
FD984898       <-- TTGTTGTCCTTCCATGGATCTTGGTGCTATGTTGGACCAATACCAGAAGC
FY440980       <-- TTGTTGTCCTTCCATGGATCTTGGTGCTATGTTGGACCAATACCAGAAGC
FD983817       <-- TTGTTGTCCTTCCATGGATCTTGGTGCTATGTTGGACCAATACCAGAAGC
FD555840       <-- TTGTTGTCCTTCCATGGATCTTGGTGCTATGTTGGACCAATACCAGAAGC
FD935607       <-- TTGTTGTCCTTCCATGGATCTTGGTGCTATGTTGGACCAATACCAGAAGC
EV572190       <-- TTGTTGTCCTTCCATGGATCTTGGTGCTATGTTGGACCAATACCAGAAGC
EW721281       <-- TTGTTGTCCTTCCATGGATCTTGGTGCTATGTTGGACCAATACCAGAAGC
EY927528       <-- ............CATGGATCTTGGTGCTATGTTGGACCAATACCAGAAGC
EY936701       <-- ..................................................
EX901418       <-- ..................................................
EV567212       --> TTGTTGTCCTTCCATGGATCTTGGTGCTATGTTGGACCAATACCAGAAGC
FD971240       --> TTGTTGTCCTTCCATGGATCTTGGTGCTATGTTGGACCAATACCAGAAGC
FD973573       --> TTGTTGTCCTTCCATGGATCTTGGTGCTATGTTGGACCAATACCAGAAGC
EY941046       --> TTGTTGTCCTTCCATGGATCTTGGTGCTATGTTGGACCAATACCAGAAGC
FD947691       --> TTGTTGTCCTTCCATGGATCTTGGTGCTATGTTGGACCAATACCAGAAGC
EY931629       --> TTGTTGTCCTTCCATGGATCTTGGTGCTATGTTGGACCAATACCAGAAGC
FD989071       --> TTGTTGTCCTTCCATGGATCTTGGTGCTATGTTGGACCAATACCAGAAGC
EV528570       --> TTGTTGTCCTTCCATGGATCTTGGTGCTATGTTGGACCAATACCAGAAGC
EW717250       --> TTGTTGTCCTTCCATGGATCTTGGTGCTATGTTGGACCAATACCAGAAGC
FD939495       --> TTGTTGTCCTTCCATGGATCTTGGTGCTATGTTGGACCAATACCAGAAGC
FD560253       --> TTGTTGTCCTTCCATGGATCTTGGTGCTATGTTGGACCAATACCAGAAGC
FD987852       --> TTGTTGTCCTTCCATGGATCTTGGTGCTATGTTGGACCAATACCAGAAGC
EY907707       --> TTGTTGTCCTTCCATGGATCTTGGTGCTATGTTGGACCAATACCAGAAGC
EX897696       --> ..................................................

               351    -    401
UN16099        --> TATCTGGCAAGAAACTATGGGATGCTAAGCATGAGAACCTCAACAATGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943588       <-- TATCTGGCAAGAAACTATGGGATGCTAAGCATGAGAACCTCAACAATGAG
FD984898       <-- TATCTGGCAAGAAACTATGGGATGCTAAGCATGAGAACCTCAACAATGAG
FY440980       <-- TATCTGGCAAGAAACTATGGGATGCTAAGCATGAGAACCTCAACAATGAG
FD983817       <-- TATCTGGCAAGAAACTATGGGATGCTAAGCATGAGAACCTCAACAATGAG
FD555840       <-- TATCTGGCAAGAAACTATGGGATGCTAAGCATGAGAACCTCAACAATGAG
FD935607       <-- TATCTGGCAAGAAACTATGGGATGCTAAGCATGAGAACCTCAACAATGAG
EV572190       <-- TATCTGGCAAGAAACTATGGGATGCTAAGCATGAGAACCTCAACAATGAG
EW721281       <-- --TCTGGCAAGAAACTATGGGATGCTAAGCATGAGAACCTCAACAATGAG
EY927528       <-- TATCTGGCAAGAAACTATGGGATGCTAAGCATGAGAACCTCAACAATGAG
EY936701       <-- ..................................................
EX901418       <-- ..................................................
EV567212       --> TATCTGGCAAGAAACTATGGGATGCTAAGCATGAGAACCTCAACAATGAG
FD971240       --> TATCTGGCAAGAAACTATGGGATGCTAAGCATGAGAACCTCAACAATGAG
FD973573       --> TATCTGGCAAGAAACTATGGGATGCTAAGCATGAGAACCTCAACAATGAG
EY941046       --> TATCTGGCAAGAAACTATGGGATGCTAAGCATGAGAACCTCAACAATGAG
FD947691       --> TATCTGGCAAGAAACTATGGGATGCTAAGCATGAGAACCTCAACAATGAG
EY931629       --> TATCTGGCAAGAAACTATGGGATGCTAAGCATGAGAACCTCAACAATGAG
FD989071       --> TATCTGGCAAGAAACTATGGGATGCTAAGCATGAGAACCTCAACAATGAG
EV528570       --> TATCTGGCAAGAAACTATGGGATGCTAAGCATGAGAACCTCAACAATGAG
EW717250       --> T--CTGGCAAGAAACTATGGGATGCTAAGCATGAGAACCTCAACAATGAG
FD939495       --> TATCTGGCAAGAAACTATGGGATGCTAAGCATGAGAACCTCAACAATGAG
FD560253       --> TATCTGGCAAGAAACTATGGGATGCTAAGCATGAGAACCTCAACAATGAG
FD987852       --> TATCTGGCAAGAAACTATGGGATGCTAAGCATGAGAACCTCAACAATGAG
EY907707       --> TATCTGGCAAGAAACTATGGGATGCTAAGCATGAGAACCTCAACAATGAG
EX897696       --> ..................................................

               401    -    451
UN16099        --> ATTGATATGATCAAAAAGGAGAATGATAGCTTACAACTGGAGCTCAGGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943588       <-- ATTGATATGATCAAAAAGGAGAATGATAGCTTACAACTGGAGCTCAGGCA
FD984898       <-- ATCGATATGATCAAAAAGGAGAATGATAGCTTACAACTGGAGCTCAGGCA
FY440980       <-- ATTGATATGATCAAAAAGGAGAATGATAGCTTACAACTGGAGCTCAGGCA
FD983817       <-- ATTGATATGATCAAAAAGGAGAATGATAGCTTACAACTGGAGCTCAGGCA
FD555840       <-- ATTGATATGATCAAAAAGGAGAATGATAGCTTACAACTGGAGCTCAGGCA
FD935607       <-- ATTGATATGATCAAAA---AGAATGATAACTTACAACTGGAGCTCAGGCA
EV572190       <-- ATCGATATGATCAAAAAGGAGAATGATAGCTTACAACTGGAGCTCAGGCA
EW721281       <-- ATTGATATGATCAAAAAGGAGAATGATGGCTTACAACTGGAGCTCAGGCA
EY927528       <-- ATTGATATGATCAAAAAGGAGAATGATAGCTTACAACTGGAGCTCAGGCA
EY936701       <-- ..................................................
EX901418       <-- ..................................................
EV567212       --> ATCGATATGATCAAAAAGGAGAATGATAGCTTACAACTGGAGCTCAGGCA
FD971240       --> ATTGATATGATTAAAAAGGAGAATGATAGCTTACAACTGGAGCTCAGGCA
FD973573       --> ATTGATATGATTAAAAAGGAGAATGATAGCTTACAACTGGAGCTCAGGCA
EY941046       --> ATTGATATGATCAAAAAGGAGAATGATAGCTTACAACTGGAGCTCAGGCA
FD947691       --> ATTGATATGATCAAAAAGGAGAATGATAGCTTACAACTGGAGCTCAGGCA
EY931629       --> ATTGATATGATCAAAAAGGAGAATGATAGCTTACAACTGGAGCTCAGGCA
FD989071       --> ATCGATATGATCAAAAAGGAGAATGATAGCTTACAACTGGAGCTCAGGCA
EV528570       --> ATCGATATGATCAAAAAGGAGAATGATAGCTTACAACTGGAGCCCAGGCA
EW717250       --> ATTGATATGATCAAAAAGGAGAATGATGGCTTACAACTGGAGCTCAGGCA
FD939495       --> ATTGATATGATCAAAAAG---AATGATAACTTACAACTGGAGCTCAGGCA
FD560253       --> ATTGATATGATCAAAAAGGAGAATGATAGCTTACAACTGGAGCTCAGGCA
FD987852       --> ATTGATATGATCAAAAAGGAGAATGATAGCTTACAACTGGAGCTCAGGCA
EY907707       --> ATTGATATGATTAAAAA.................................
EX897696       --> ..................................................

               451    -    501
UN16099        --> TTTGAAAGGGGAAGATATACAGTCTCTCAACTTAAAAAACTTGATGGCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943588       <-- TTTGAAAGGGGAAGATATACAGTCTCTCAACTTAAAAAACTTGATGGCCG
FD984898       <-- TTTGAAAGGGGAAGATATACAGTCTCTCAACTTAAAAAACTTGATGGCCG
FY440980       <-- TTTGAAAGGGGAAGATATACAGTCTCTCAACTTAAAAAACTTGATGGCCG
FD983817       <-- TTTGAAAGGGGAAGATATACAGTCTCTCAACTTAAAAAACTTGATGGCCG
FD555840       <-- TTTGAAAGGGGAAGATATACAGTCTCTCAACTTAAAAAACTTGATGGCCG
FD935607       <-- TTTGAAAGGGGAAGATATACAGTCTCTCAACTTAAAAAACTTGATGGCCG
EV572190       <-- TTTGAAAGGGGAAGATATACAGTCTCTCAACTTAAAAAACTTGATGGCCG
EW721281       <-- TTTGAAAGGGGAAGATATACAGTCTCTCAACTTAAAAAACTTGATGGCCG
EY927528       <-- TTTGAAAGGGGAAGATATACAGTCTCTCAACTTAAAAAACTTGATGGCCG
EY936701       <-- ..................................................
EX901418       <-- ..................................................
EV567212       --> TTTGAAAGGGGAAGATATACAGTCTCTCAACTTAAAAAACTTGATGGCCG
FD971240       --> TTTGAAAGGGGAAGATATACAGTCTCTCAACTTAAAAAACTTGATGGCCG
FD973573       --> TTTGAAAGGGGAAGATATACAGTCTCTCAACTTAAAAAACTTGATGGCCG
EY941046       --> TTTGAAAGGGGAAGATATACAGTCTCTCAACTTAAAAAACTTGATGGCCG
FD947691       --> TTTGAAAGGGGAAGATATACAGTCTCTCAACTTAAAAAACTTGATGGCCG
EY931629       --> TTTGAAAGGGGAAGATATACAGTCTCTCAACTTAAAAAACTTGATGGCCG
FD989071       --> TTTGAAAGGGGAAGATATACAGTCTCTCAACTTAAAAAACTTGATGGCCG
EV528570       --> TTTGAAAGGGGAAGATATACAGTCTCTCAACTTAAAAAACTTGATGGCCG
EW717250       --> TTTGAAAGGGGAAGATATACAGTCTCTCAACTTAAAAAACTTGATGGCCG
FD939495       --> TTTGAAAGGGGAAGATATACAGTCTCTCAACTTAAAAAACTTGATGGCCG
FD560253       --> TTTGAAAGGGGAAGATATACAGTCTCTCAACTTAAAAAACTTGATGGCCG
FD987852       --> TTTGAAAGGGGAAGATATACAGTCTCTCAACTTAAAAAACTTGATGGCCG
EY907707       --> ..................................................
EX897696       --> ..................................................

               501    -    551
UN16099        --> TAGAGCATGGCGTTGAACATGGCCTCGACAAAGTCCGAGACCACCAGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943588       <-- TAGAGCACGGCGTTGAACATGGCCTCGACAAAGTCCGAGACCACCAGATG  Raphanus sativus cv Early Scarlet Globe
FD984898       <-- TAGAGCATGGCGTTGAACATGGCCTCGACAAAGTCCGAGACCACCAGATG  Raphanus raphanistrum subsp. landra
FY440980       <-- TAGAGCACGGCGTTGAACATGGCCTCGACAAAGTCCGAGACCACCAGATG  Raphanus sativus cv GSK3-1
FD983817       <-- TAGAGCATGGCGTGGAACATGGCCTCGACAAAGTCCGAGACCACCAGATG  Raphanus raphanistrum subsp. landra
FD555840       <-- TAGAGCATGGCGTGGAACATGGCCTCGACAAAGTCCGAGACCACCAGATG  Raphanus raphanistrum subsp. landra
FD935607       <-- TAGAGCACGGCGTTGAACATGGCCTCGACAAAGTCCGAGACCACCAGATG  Raphanus sativus var. oleiformis
EV572190       <-- TAGAGCATGGCGTTGAACATGGCCTCGACAAAGTCCGAGACCACCAGATG  Raphanus raphanistrum subsp. landra
EW721281       <-- TAGAGCACGGCGTTGAACATGGCCTCGACAAAGTCCGAGACCACCAGATG  Raphanus sativus var. oleiformis
EY927528       <-- TAGAGCACGGCGTTGAACATGGCCTCGACAAAGTCCGAGACCACCAGATG  Raphanus sativus var. oleiformis
EY936701       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX901418       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV567212       --> TAGAGCATGGCGTTGAACATGGCCTCGACAAAGTCCGAGACCACCAGATG  Raphanus raphanistrum subsp. landra
FD971240       --> TAGAGCATGGCGTTGAACATGGCCTCGACAAAGTCCGAGACCACCAGATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973573       --> TAGAGCATGGCGTTGAACATGGCCTCGACAAAGTCCGAGACCACCAGATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY941046       --> TAGAGCACGGCGTTGAACATGGCCTCGACAAAGTCCGAGACCACCAGATG  Raphanus sativus cv Early Scarlet Globe
FD947691       --> TAGAGCACGGCGTTGAACATGGCCTCGACAAAGTCCGAGACCACCAGATG  Raphanus sativus cv Early Scarlet Globe
EY931629       --> TAGAGCACGGCGTTGAACATGGCCTCGACAAAGTCCGAGACCACCAGATG  Raphanus sativus var. oleiformis
FD989071       --> TAGAGCATGGCGTTGAACATGGCCTCGACAAAGTCCGAGACCACCAGATG  Raphanus raphanistrum subsp. landra
EV528570       --> TAGAGCATGGCGTTGAACATGGCCTCGACAAAGTCCGAGACCACCAGATG  Raphanus raphanistrum subsp. maritimus
EW717250       --> TAGAGCACGGCGTTGAACATGGCCTCGACAAAGTCCGAGACCACCAGATG  Raphanus sativus var. oleiformis
FD939495       --> TAGAGCACGGCGTTGAACATGGCCTCGACAAAGTCCGAGACCACCAGATG  Raphanus sativus var. oleiformis
FD560253       --> TAGAGCATGGCGTGGAACATGGCCTCGACAAAGTCCGAGACCACCAGATG  Raphanus raphanistrum subsp. landra
FD987852       --> TAGAGCATGGCGTGGAACATGGCCTCGACAAAGTCCGAGACCACCAGATG  Raphanus raphanistrum subsp. landra
EY907707       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX897696       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               551    -    601
UN16099        --> GAGTTCCTTATGACAAAGAGGAGAAACGAGAAAATGATGGTGGAGGAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943588       <-- GAGTTCCTTATGACAAAGAGGAGAAACGAGAAAATGATGGTGGAGGAGAA
FD984898       <-- GAGTTCCTTATGACAAAGAGGAGAAACGAGAAAATGATGGTGGAGGAGAA
FY440980       <-- GAGTTCCTTATGACAAAGAGGAGAAACGAGAAAATGATGGTGGAGGAGAA
FD983817       <-- GAGTTCCTTATGACAAAGAGGAGAAACGAGAAAATGATGGTGGAGGAGAA
FD555840       <-- GAGTTCCTTATGACAAAGAGGAGAAACGAGAAAATGATGGTGGAGGAGAA
FD935607       <-- GAGTTCCTTATGACAAAGAGGAGAAACGAGAAAATGATGGTGGAGGAGAA
EV572190       <-- GAGTTCCTTATGACAAAGAGGAGAAACGAGAAAATGATGGTGGAGGAGAA
EW721281       <-- GAGTTCCTTATGACAAAGAGGAGAAACGAGAAAATGATGGTGGAGGAGAA
EY927528       <-- GAGTTCCTTATGACAAAGAGGAGAAACGAGAAAATGATGGTGGAGGAGAA
EY936701       <-- GAGTCCCTTATGACAAAGAGGAGAAACGAGAAAATGATGGTGGAGGAGAA
EX901418       <-- ..................................................
EV567212       --> GAGTTCCTTATGACAAAGAGGAGAAACGAGAAAATGATGGTGGAGGAGAA
FD971240       --> GAGTTCCTTATGACAAAGAGGAGAAACGAGAAAATGATGGTGGAGGAGAA
FD973573       --> GAGTTCCTTATGACAAAGAGGAGAAACGAGAAAATGATGGTGGAGGAGA.
EY941046       --> GAGTTCCTTATGACAAAGAGGAGAAACGAGAAAATGATGGTGGAGGAGAA
FD947691       --> GAGTTCCTTATGACAAAGAGGAGAAACGAGAAAATGATGGTGGAGGAGAA
EY931629       --> GAGTTCCTTATGACAAAGAGGAGAAACGAGAAAATGATGGTGGAGGAGAA
FD989071       --> GAGTTCCTTATGACAAAGAGGAGAAACGAGAAAATGATGGTGGAGGAGAA
EV528570       --> GAGTTCCTTATGACAAAGAGGAGAAACGAGAAAATGATGGTGGAGGAGAA
EW717250       --> GAGTTCCTTATGACAAAGAGGAGAAACGAGAAAATGATGGTGGAGGAGAA
FD939495       --> GAGTTCCTTATGACAAAGAGGAGAAACGAGAAAATGATGGTGGAGGAGAA
FD560253       --> GAGTTCCTTATGACAAAGAGGAGAAACGAGAAAATGATGGTGGAGGAGAA
FD987852       --> GAGTTCCTTATGACAAAGAGGAGAAACGAGAAAATGATGGTGGAGGAGAA
EY907707       --> ..................................................
EX897696       --> ..................................................

               601    -    651
UN16099        --> TCGGCAGCTCAGTTTCCAGCTGCAACAGCAGGAGATGGCGATAGCTAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943588       <-- TCGGCAGCTCAGTTTCCAGCTGCAACAGCAGGAGATGGCGATAGCTAGCA  Raphanus sativus cv Early Scarlet Globe
FD984898       <-- TCGGCAGCTCAGTTTCCAGCTGCAACAGCAGGAGATGGCAATAGCTAGCA  Raphanus raphanistrum subsp. landra
FY440980       <-- TCGGCAGCTCAGTTTCCAGCTGCAACAGCAGGAGATGGCGATAGCTAGCA  Raphanus sativus cv GSK3-1
FD983817       <-- TCGGCAGCTCAGTTTCCAGCTGCAACAGCAGGAGATGGCAATAGCTAGCA  Raphanus raphanistrum subsp. landra
FD555840       <-- TCGGCAGCTCAGTTTCCAGCTGCAACAGCAGGAGATGGCAATAGCTAGCA  Raphanus raphanistrum subsp. landra
FD935607       <-- TCGGCAGCTCAGTTTCCAGCTGCAACAGCAGGAGATGGCGATAGCTAGCA  Raphanus sativus var. oleiformis
EV572190       <-- TCGGCAGCTCAGTTTCCAGCTGCAACAGCAGGAGATGGCAATAGCTAGCA  Raphanus raphanistrum subsp. landra
EW721281       <-- TCGGCAGCTCAGTTTCCAGCTGCAACAGCAGGAGATGGCGATAGCTAGCA  Raphanus sativus var. oleiformis
EY927528       <-- TCGGCAGCTCAGTTTCCAGCTGCAACAGCAGGAGATGGCGATAGCTAGCA  Raphanus sativus var. oleiformis
EY936701       <-- TCGGCAGCTCAGTTTCCAGCTGCAACAGCAGGAGATGGCGATAGCTAGCA  Raphanus sativus cv Early Scarlet Globe
EX901418       <-- ....gAGCTCAGTTTCCAGCTGCAACAGCAGGAGATGGCGATAGCTAGCA  Raphanus sativus cv Early Scarlet Globe
EV567212       --> TCGGCAGCTCAGTTTCCAGCTGCAACAGCAGGAGATGGCAATAGCTAGCA  Raphanus raphanistrum subsp. landra
FD971240       --> TCGGCAGCTCAGTTTCCAGCTGCAACAGCAGGAGATGGCAATAGCTAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973573       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY941046       --> TCGGCAGCTCAGTTTCCAGCTGCAACAGCAGGAGATGGCGATAGCTAGCA  Raphanus sativus cv Early Scarlet Globe
FD947691       --> TCGGCAGCTCAGTTTCCAGCTGCAACAG......................  Raphanus sativus cv Early Scarlet Globe
EY931629       --> TCGGCAGCTCAGTTTCCAGCTGCAACAGCAGGAGATGGCGATAGCTAGCA  Raphanus sativus var. oleiformis
FD989071       --> TCGGCAGCTCAGTTTCCAGCTGCAACAGCAGGAGATGGCAATAGCTAGCA  Raphanus raphanistrum subsp. landra
EV528570       --> TCGGCAGCTCAGTTTCCAGCTGCAACAGCAGGAGATGGCAATAGCTAGCA  Raphanus raphanistrum subsp. maritimus
EW717250       --> TCGGCAGCTCAGTTTCCAGCTGCAACAGCAGGAGATGGCGATAGCTAGCA  Raphanus sativus var. oleiformis
FD939495       --> TCGGCAGCTCAGTTTCCAGCTGCAACAGCAGGAGATGGCGATAGCTAGCA  Raphanus sativus var. oleiformis
FD560253       --> TCGGCAGCTCAGTTTCCAGCTGCAACAGCAGGAGATGGCAATAGCTAGCA  Raphanus raphanistrum subsp. landra
FD987852       --> TCGGCAGCTCAGTTTCCAGCTGCAACAGCAGGAGATGGCAATAGCTAGCA  Raphanus raphanistrum subsp. landra
EY907707       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX897696       --> .........................CAGCAGGAGATGGCGATAGCTAGCA  Raphanus sativus cv Early Scarlet Globe

               651    -    701
UN16099        --> ACGCAAGAGGAATGATGATGAAAGATCATGATGCGCAATTCGGGTATAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943588       <-- ACGCAAGAGGAATGATGATGAAAGATCATGATGCGCAATTCGGGTATAGA
FD984898       <-- ACGCAAGAGGAATGATGATGAAAGATCATGATGCGCAATTCGGGTATAGA
FY440980       <-- ACGCAAGAGGAATGATGATGAAAGATCATGATGCGCAATTCGGGTATAGA
FD983817       <-- ACGCAAGAGGAATGATGATGAAAGATCATGATGCGCAATTCGGGTATAGA
FD555840       <-- ACGCAAGAGGAATGATGATGAAAGATCATGATGCGCAATTCGGGTATAGA
FD935607       <-- ACGCAAGAGGAATGATGATGAAAGATCATGATGCGCAATTCGGGTATAGA
EV572190       <-- ACGCAAGAGGAATGATGATGAAAGATCATGATGCGCAATTCGGGTATAGA
EW721281       <-- ACGCAAGAGGAATGATGATGAAAGATCATGATGCGCAATTCGGGTATAGA
EY927528       <-- ACGCAAGAGGAATGATGATGAAAGATCATGATGCGCAATTCGGGTATAGA
EY936701       <-- ACGCAAGAGGAATGATGATGAAAGATCATGATGCGCAATTCGGGTATAGA
EX901418       <-- ACGCAAGAGGAATGATGATGAAAGATCATGATGCGCAATTCGGGTATAGA
EV567212       --> ACGCAAGAGGAATGATGATGAAAGATCATGATGCGCAATTCGGGTATAGA
FD971240       --> ACGCAAGAG-AATGATGATGGAAGATCATGATGCGCAATTCGGGTATAGA
FD973573       --> ..................................................
EY941046       --> ACGCAAGAGGAATGATGATGAAAGATCATGATGCGCAATTCGGGTATAGA
FD947691       --> ..................................................
EY931629       --> ACGCAAGAGGAATGATGATGAAAGATCATGATGCGCAATTCGGGTATAGA
FD989071       --> ACGCAAGAGGAATGATGATGAAAGATCATGATGCGCAATTCGGGTATAGA
EV528570       --> ACGCAAGAGGAATGATGATGAAAGATCATGATGCGCAATTCGGGTATAGA
EW717250       --> ACGCAAGAGGAATGATGATGAAAGATCATGATGCGCAATTCGGGTATAGA
FD939495       --> ACGCAAGAGGAATGATGATGAAAGATCATGATGCGCAATTCGGGTATAGA
FD560253       --> ACGCAAGAGGAATGATGATGAAAGATCATGATGCGCAATTCGGGTATAGA
FD987852       --> ACGCAAGAGGAATGATGATGAAAGATCATGATGCGCAATTCGGGTATAGA
EY907707       --> ..................................................
EX897696       --> ACGCAAGAGGAATGATGATGAAAGATCATGATGCGCAATTCGGGTATAAA

               701    -    751
UN16099        --> GTTCAACCCATTCAGCCAAATCTTCAGGAAAAGATTATGTCATTGGTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943588       <-- GTTCAACCCATTCAGCCAAATCTTCAGGAAAAGATTATGTCATTGGTCAT
FD984898       <-- GTTCAACCCATTCAGCCAAATCTCCAGGAAAAGATTATGTCATTGGTCAT
FY440980       <-- GTTCAACCCATTCAGCCAAATCTTCAGGAAAAGATTATGTCATTGGTCAT
FD983817       <-- GTTCAACCCATTCAGCCAAATCTTCAGGAAAAGATTATGTCATTGGTCAT
FD555840       <-- GTTCAACCCATTCAGCCAAATCTTCAGGAAAAGATTATGTCATTGGTCAT
FD935607       <-- GTTCAACCCATTCAGCCAAATCTTCAGGAAAAGATTATGTCATTGGTCAT
EV572190       <-- GTTCAACCCATTCAGCCAAATCTCCAGGAAAAGATTATGTCATTGGTCAT
EW721281       <-- GTTCAACCCATTCAGCCAAATCTTCAGGAAAAGATTATGTCATTGGTCAT
EY927528       <-- GTTCAACCCATTCAGCCAAATCTTCAGGAAAAGATTATGTCATTGGTCAT
EY936701       <-- GTTCAACCCATTCAGCCAAATCTTCAGGAAAAGATTATGTCATTGGTCAT
EX901418       <-- GTTCAACCCATTCAGCCAAATCTTCAGGAAAAGATTATGTCATTGGTCAT
EV567212       --> GTTCAACCCATTCAGCCAAATCTCCAGGAAAAGATTATGTCATTGGTCAT
FD971240       --> GTTCA-CCCATTCAGCCAA-TCTTCAG--AAAGA-TATGTCAT-GGTCAT
FD973573       --> ..................................................
EY941046       --> GTTCAACCCATTCAGCCAAATCTTCAG-AAAAGATTATGTCATTGGTCAT
FD947691       --> ..................................................
EY931629       --> GTTCAACCCATTCAGCCAAATCT...........................
FD989071       --> GTTCAACCCATTCAGCCAAATCTCCAGGAAAAGATTATGTCATTGGTCAT
EV528570       --> GTTCAACCCATTCAGCCAAATCTCCAGGAAAAGATTATGTCATTGGTCAT
EW717250       --> GTTCAACCCATTCAGCCAAATCTTCAG-AAAAGATTATGTCATTGGTCAT
FD939495       --> GTTCAACCCATTCAGCCAAATCT...........................
FD560253       --> GTTCAACCCATTCAGCCAAATCTTCAG-AAAAGATTATGTCATTGGTCAT
FD987852       --> GTTCAACCCATTCAGCCAAATCTTCAG-AAAAGATTATGTCATTGGTCAT
EY907707       --> ..................................................
EX897696       --> GTTCAACCCATTCAGCCAAATCTTCAGGAAAAGATTATGTCATTGGTCAT

               751    -    801
UN16099        --> CGATTGATCATATTTGAGATTAGCAATCTCATGGCCAATCTCTATGTCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943588       <-- CGATTGATCATATTTGAGATTAGCAATCTCATGGCCAATCTCTATGTCGT
FD984898       <-- CGATTGATCATATTTGAGATTAGCGATCTCATGGCCAATCTCTATGTCGT
FY440980       <-- CGATTGATCATATTTGAGATTAGCAATCTCATGGCCAATCTCTATGTCGT
FD983817       <-- CGATTGATCATATTTGAGATTAGCAATCTCATGGCCAATCTATATGTCGT
FD555840       <-- CGATTGATCATATTTGAGATTAGCAATCTCATGGCCAATCTATATGTCGT
FD935607       <-- CGATTGATCATATTTGAGATTAGCAATCTCATGGCCAATCTCTATGTCGT
EV572190       <-- CGATTGATCATATTTGAGATTAGCAATCTCATGGCCAATCTCTATGTCGT
EW721281       <-- CGATTGATCATATTTGAGATTAGCAATCTCATGGCCAATCTCTATGTCGT
EY927528       <-- CGATTGATCATATTTGAGATTAGCAATCTCATGGCCAATCTCTATGTCGT
EY936701       <-- CGATTGATCATATTTGAGATTAGCAATCTCATGGCCAATCTCTATGTCGT
EX901418       <-- CGATTGATCATATTTGAGATTAGCAATCTCATGGCCAATCTCTATGTCGT
EV567212       --> CGATTGATCATATTTGAGATTAGCAATCTCATGGC...............
FD971240       --> CGATTGATCATATTTGAGAT-AGC-ATCTCATGGCCAtctacc.......
FD973573       --> ..................................................
EY941046       --> CGATTGATCATATTTGAGAT-AGC-ATCTCATGGCCA-TCTCTATGTCGT
FD947691       --> ..................................................
EY931629       --> ..................................................
FD989071       --> CGATTGATCATATTTGAGATTAGCGATCTCATGGCCAATCTCTATGTCGT
EV528570       --> CGATTGATCATATTTGAGATTAGCAATCTCATGGCCAATCTCTATGTCGT
EW717250       --> CGATTGATCATATTTGAGAT-AGCAATCTCATGGCCA-TCTCTATGTCGT
FD939495       --> ..................................................
FD560253       --> CGATTGATCATATTTGAGATTAGCAATCTCATGGCCA-TCTATATGTCGT
FD987852       --> CGATTGATCATATTTGAGATTAGCAATCTCATGGCCA-TCTATATGTCGT
EY907707       --> ..................................................
EX897696       --> CGATTGATCATATTTGAGATTAGCAATCTCATGGCCAATCTCTATGTCGT

               801    -    851
UN16099        --> GTGGTTCTTTAATTTGTCTTTATAATTGTGTGTCCTTCCAATCTCGAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943588       <-- GTGGTTCTTTAATTTGTCTTTATAATTGTGTGTCCTTCCAATCTCTAGCC  Raphanus sativus cv Early Scarlet Globe
FD984898       <-- GTGGTTATTTAATTTGTCTTTATAATTGTGTGTCCTTTCAATCTCGAGCC  Raphanus raphanistrum subsp. landra
FY440980       <-- GTGGTTCTTTAATTTGTCTTTATAATTGTGTGTCCTTCCAATCTCGAGCC  Raphanus sativus cv GSK3-1
FD983817       <-- GTGGTTATTTAATTTGTCTTTATAACTGTGTGTCCTTTCAATCTCGAGCC  Raphanus raphanistrum subsp. landra
FD555840       <-- GTGGTTATTTAATTTGTCTTTATAACTGTGTGTCCTTTCAATCTCGAGCC  Raphanus raphanistrum subsp. landra
FD935607       <-- GTGGTTCTTTAATTTGTCTTTATAATTGTGTGTCCTTCCAATCTCGAGCC  Raphanus sativus var. oleiformis
EV572190       <-- GTGGTTATTTAATTTGTCTTTATAATTGTGTGTCCTTTCAATCTCGAACC  Raphanus raphanistrum subsp. landra
EW721281       <-- GTGGTTCTTTAATTTGTCTTTATAATTGTGTGTCCTTCCAATCTCGAGCC  Raphanus sativus var. oleiformis
EY927528       <-- GTGGTTCTTTAATTTGTCTTTATAATTGTGTGTCCTTCCAATCTCGAGCC  Raphanus sativus var. oleiformis
EY936701       <-- GTGGTTCTTTAATTTGTCTTTATAATTGTGTGTCCTTCCAATCTCGAGCC  Raphanus sativus cv Early Scarlet Globe
EX901418       <-- GTGGTTCTTTAATTTGTCTTTATAATTGTGTGTCCTTCCAATCTCGAG..  Raphanus sativus cv Early Scarlet Globe
EV567212       --> ..................................................  Raphanus raphanistrum subsp. landra
FD971240       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973573       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY941046       --> GTGGTTCTTTAtttg...................................  Raphanus sativus cv Early Scarlet Globe
FD947691       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY931629       --> ..................................................  Raphanus sativus var. oleiformis
FD989071       --> GTGGTTATTTAATTTGTCTTTATAATTGTGTGTCCTTTCAATCTCGAGCC  Raphanus raphanistrum subsp. landra
EV528570       --> GTGGTTATTTAATTTGTCTTTATAATTGTGTGTCCTTTCAATCTCGAGCC  Raphanus raphanistrum subsp. maritimus
EW717250       --> GTGGTTCTTTA-TTTGTCTTTATAATTGTGTGTC-TTCCA-TCTCGAGC-  Raphanus sativus var. oleiformis
FD939495       --> ..................................................  Raphanus sativus var. oleiformis
FD560253       --> GTGGTTATTTAATTTGTCTTTATAACTGTGTGTCCTTTC-ATCTCGA...  Raphanus raphanistrum subsp. landra
FD987852       --> GTGGTTATTTAATTTGTCTTTATAACTGTGTGTCCTTTC-ATCTCGAGC-  Raphanus raphanistrum subsp. landra
EY907707       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX897696       --> GTGGTTCTTTAATTTGTCTTTGTAATTGTGTGTCCTTCCAATCTCGAGCC  Raphanus sativus cv Early Scarlet Globe

               851    -    901
UN16099        --> ACATATAAACTCTCTATCCTGCTTTCTTATGAACTCTCTATGTATTGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943588       <-- ACATATAAACTCTCTATCCTGCTTTCTTATGAACTCTCTATGTATTGGTT
FD984898       <-- ACATATAAACTCTCTATCCTGCTTTCTTATGAACTCTCTATGTATTGGTT
FY440980       <-- ACATATAAACTCTCTATCCTGCTTTCTTATGAACTCTCTATGTATTGGTT
FD983817       <-- ACATATAAACTCTCTATCCTGCTTTCTTATGAACTCTCTATGTATTGGTT
FD555840       <-- ACATATAAACTCTCTATCCTGCTTTCTTATGAACTCTCTATGTATTGGTT
FD935607       <-- ACATATAAACTCTCTATCCTGCTTTCTTATGAACTCTCTATGTATTGGTT
EV572190       <-- ACATATAAACTCTCTATCCTGCTTTCTTATGAACTCTCTATGTATTGGTT
EW721281       <-- ACATATAAACTCTCTATCCTGCTTTCTTATGAACTCTCTATGTATTGGTT
EY927528       <-- ACATATAAACTCTCTATCCTGCTTTCTTATGAACTCTCTATGTATTGGTT
EY936701       <-- ACATATAAACTCTCTATCCTGCTTTCTTATGAACTCTCTATGTATTGGTT
EX901418       <-- ..................................................
EV567212       --> ..................................................
FD971240       --> ..................................................
FD973573       --> ..................................................
EY941046       --> ..................................................
FD947691       --> ..................................................
EY931629       --> ..................................................
FD989071       --> ACATATAAACTCTCTATCCTG.............................
EV528570       --> ACATATAAACTCTCTATCCTGCTTTCTTATGA-CTCTCTATGTATTGGGT
EW717250       --> ACATATAA-CTCTCTATC-TGCTT-C-TATG-ACTCTCTATGTAT-GG-T
FD939495       --> ..................................................
FD560253       --> ..................................................
FD987852       --> ACATATAA-CTCTCTATCtgct............................
EY907707       --> ..................................................
EX897696       --> ACATATAAACTCTCTATCCTGCTTTCTTATGAACTCTC............

               901    -    951
UN16099        --> GTGATTGATGCGTGTTGCTTTCACTTGATTTGATCATCTCTGTTTCTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943588       <-- GTGATTGATGCGTGTTGCTTTCACTTGATTTGATC...............  Raphanus sativus cv Early Scarlet Globe
FD984898       <-- GTGATTGATGTGTGTTGCTTTCACTT........................  Raphanus raphanistrum subsp. landra
FY440980       <-- GTGATTGATGCGTGTTGCTTcactg.........................  Raphanus sativus cv GSK3-1
FD983817       <-- GTGATTGATGTGTGTTGCTTTC............................  Raphanus raphanistrum subsp. landra
FD555840       <-- GTGATTGATGTGTGTTGCTTTC............................  Raphanus raphanistrum subsp. landra
FD935607       <-- GTGATTGATGCGTGTTGCTTTCACTTG.......................  Raphanus sativus var. oleiformis
EV572190       <-- GTGATTGATGTGTGTTGCTTTCACTTGg......................  Raphanus raphanistrum subsp. landra
EW721281       <-- GTGATTGATGCGTGTTGCTTTCACTTGATTTGATCt..............  Raphanus sativus var. oleiformis
EY927528       <-- GTGATTGATGCGTGTTGCTTTCACTTGATTTGATCATCTCTGTTTCTCTC  Raphanus sativus var. oleiformis
EY936701       <-- GTGATTGATGCGTGTTGCTTTCACTTGATTTGATCAcc............  Raphanus sativus cv Early Scarlet Globe
EX901418       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV567212       --> ..................................................  Raphanus raphanistrum subsp. landra
FD971240       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973573       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY941046       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD947691       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY931629       --> ..................................................  Raphanus sativus var. oleiformis
FD989071       --> ..................................................  Raphanus raphanistrum subsp. landra
EV528570       --> GTGATTGATGTGTGTTG.................................  Raphanus raphanistrum subsp. maritimus
EW717250       --> GTGA-TGATGCGTGTgctt...............................  Raphanus sativus var. oleiformis
FD939495       --> ..................................................  Raphanus sativus var. oleiformis
FD560253       --> ..................................................  Raphanus raphanistrum subsp. landra
FD987852       --> ..................................................  Raphanus raphanistrum subsp. landra
EY907707       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX897696       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               951    -   1001
UN16099        --> TCTTGATAGGTTAACGATATTTATGTAGTGTTAAACGGATATAAGATATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943588       <-- ..................................................
FD984898       <-- ..................................................
FY440980       <-- ..................................................
FD983817       <-- ..................................................
FD555840       <-- ..................................................
FD935607       <-- ..................................................
EV572190       <-- ..................................................
EW721281       <-- ..................................................
EY927528       <-- TCTTGATAGGTTAACGATATTTATGTAGTGTTAAACGGATATAAGATATT
EY936701       <-- ..................................................
EX901418       <-- ..................................................
EV567212       --> ..................................................
FD971240       --> ..................................................
FD973573       --> ..................................................
EY941046       --> ..................................................
FD947691       --> ..................................................
EY931629       --> ..................................................
FD989071       --> ..................................................
EV528570       --> ..................................................
EW717250       --> ..................................................
FD939495       --> ..................................................
FD560253       --> ..................................................
FD987852       --> ..................................................
EY907707       --> ..................................................
EX897696       --> ..................................................

               1001   -   1051
UN16099        --> TATATGCAAATAAGATAATAGC
                   ~~~~~~~~~~~~~~~~~~~~~~
FD943588       <-- ......................
FD984898       <-- ......................
FY440980       <-- ......................
FD983817       <-- ......................
FD555840       <-- ......................
FD935607       <-- ......................
EV572190       <-- ......................
EW721281       <-- ......................
EY927528       <-- TATATGCAAATAAGATAATAGC
EY936701       <-- ......................
EX901418       <-- ......................
EV567212       --> ......................
FD971240       --> ......................
FD973573       --> ......................
EY941046       --> ......................
FD947691       --> ......................
EY931629       --> ......................
FD989071       --> ......................
EV528570       --> ......................
EW717250       --> ......................
FD939495       --> ......................
FD560253       --> ......................
FD987852       --> ......................
EY907707       --> ......................
EX897696       --> ......................