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Alignment for radish unigene UN16105

               1      -     51
UN16105        --> CACTACAAACAAAAAAAAGAACAATACTCAAATACATATAAATAAGTTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX770197       <-- CACTACAAACAAAAAAAAGAACAATACTCAAATACATATAAATAAGTTAA
FY444727       <-- ............................................AGTTAA
FY452307       <-- ..................................................
FD579352       <-- ..................................................
FY435784       <-- ..................................................
EX747569       <-- ..................................................
FD578115       <-- ..................................................
FD533315       <-- ..................................................
EY939392       <-- ..................................................
EV548464       <-- ..................................................
FY436904       <-- ..................................................
FD583351       --> ..................................................

               51     -    101
UN16105        --> CAGAGACAAACACCAAAAGGTTTGAAGTCAAAGAC-AATAATCCATACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX770197       <-- CAGAGACAAACACCAAAAGGTTTGAAGTCAAAGACCAATAATCCATACAA
FY444727       <-- CAGAGACAAACACCAAAAGGTTTGAAGTCAAAGAC-AATAATCCATACAA
FY452307       <-- ..................................................
FD579352       <-- ..................................................
FY435784       <-- ..................................................
EX747569       <-- ..................................................
FD578115       <-- ..................................................
FD533315       <-- ..................................................
EY939392       <-- ..................................................
EV548464       <-- ..................................................
FY436904       <-- ..................................................
FD583351       --> .................AGGTTTGAAGTCAAAGAC-AATAATCCATACAA

               101    -    151
UN16105        --> AGATTAAGCTCAAAGGGGTTTTGGACCATCTAAGAAACTAA-GATTCTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX770197       <-- AGATTAAGCTCAAAGGGGTTTTCGACCATCTAAGAAACTAAAGATTCTAA
FY444727       <-- AGATTAAGCTCAAAGGGGTTTTGGACCATCTAAGAAACTAA-GATTCTAA
FY452307       <-- ..................................................
FD579352       <-- ..................................................
FY435784       <-- ..................................................
EX747569       <-- ..................................................
FD578115       <-- ..................................................
FD533315       <-- ..................................................
EY939392       <-- ..................................................
EV548464       <-- ..................................................
FY436904       <-- ..................................................
FD583351       --> AGATTAAGCTCAAAGGGGTTTTGGACCATCTAAGAAACTAA-GATTCTAA

               151    -    201
UN16105        --> AGAGAACA---TTAAACGTGAGAAGCTTTGGATTTTTTTTGAATACCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX770197       <-- AGAGAACAACATTAAACGTGAGAAGCTTTGGATTTTTTT-GAATACCAAA
FY444727       <-- AGAGAACA---TTAAACGTGAGAAGCTTTGGATTTTTTTTGAATACCAAA
FY452307       <-- ..................................................
FD579352       <-- ..................................................
FY435784       <-- ..................................................
EX747569       <-- ..................................................
FD578115       <-- ..................................................
FD533315       <-- ..................................................
EY939392       <-- ..................................................
EV548464       <-- ..................................................
FY436904       <-- ..................................................
FD583351       --> AGAGAACA---TTAAACGTGAGAAGCTTTGGATTTTTTTTGAATACCAAA

               201    -    251
UN16105        --> CTGTCACAAGTTTTTATTAGACCAAAGAGATGCTGCTCTCACCGCCTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX770197       <-- CTGCCACAAGTTTTTATTAGACCAAAGAGATGCTGCTCTCACCGCCTGGT
FY444727       <-- CTGTCACAAGTTTTTATTAGACCAAAGAGATGCTGCTCTCACCGCCTGGT
FY452307       <-- ...............ATTAGACCAAAGAGATGCTGCTCTCACCGCCTGTG
FD579352       <-- ..................................................
FY435784       <-- ..................................................
EX747569       <-- ..................................................
FD578115       <-- ..................................................
FD533315       <-- ..................................................
EY939392       <-- ..................................................
EV548464       <-- ..................................................
FY436904       <-- ..................................................
FD583351       --> CTGTCACAAGTTTTTATTAAACCAAAGAGATGCTGCTCTCACCGCCTGGT

               251    -    301
UN16105        --> GGCTTCCTCACACCTCCAAAATAGTCTCGGGACTCTGACTTCCCGTCTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX770197       <-- GGCTTCCTCACACCTCCAAAATAGTCTCGGGACTCTGACTTCCCGTCTGC
FY444727       <-- GGCTTCCTCACACCTCCAAAATAGTCTCGGGACTCTGACTTCCCGTCTGC
FY452307       <-- GGCTTCCTCACACCTCCAAAATAGTCTCGGGACTCTGACTTCCCGTCTGC
FD579352       <-- ..................................................
FY435784       <-- ..................................................
EX747569       <-- ..................................................
FD578115       <-- ..................................................
FD533315       <-- ..................................................
EY939392       <-- ..................................................
EV548464       <-- ..................................................
FY436904       <-- ..................................................
FD583351       --> GGCTTCCTCACACCTCCAAAATAGTCTCGGGACTCTGACTTCCCGTCTGC

               301    -    351
UN16105        --> AAATATATTGTTCCCGCTCATCTCCCTGAGTTTAGCTGAGCTTAGCTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX770197       <-- AAATATATTGTTCCCGCTCATCTCCCTTAGTTTAGCTGAGCTTAGCTGCT
FY444727       <-- AAATATATTGTTCCCGCTCATCTCCCTGAGTTTAGCTGAGCTTAGCTGCT
FY452307       <-- AAATATATTGTTCCCGCTCATCTCCCTGAGTTTAGCTGAGCTTAGCTGCT
FD579352       <-- ..................................................
FY435784       <-- ..................................................
EX747569       <-- ..................................................
FD578115       <-- ..................................................
FD533315       <-- ..................................................
EY939392       <-- ..................................................
EV548464       <-- ..................................................
FY436904       <-- ..................................................
FD583351       --> AAATATATTGTTCCCGCTCATCTCCCTGAGTTTAGCTGAACTTAGCTGCT

               351    -    401
UN16105        --> TGTCTCCAGTTCCAGGCGACTCATCTCCTTTGAAGATACCGTTGCCCGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX770197       <-- TGTCTCCAGTTCCAGGCGACTCATCTCCTTTGAAGATACCATTGCCCGTG
FY444727       <-- TGTCTCCAGTTCCAGGCGACTCATCTCCTTTGAAGATACCGTTGCCCGTG
FY452307       <-- TGTCTCCAGTTCCAGGCGACTCATCTCCTTTGAAGATACCGTTGCCCGTG
FD579352       <-- ..............GGCGACTCATCTCCTTTGAAGATACCGT-GCCCGTG
FY435784       <-- ..................................................
EX747569       <-- ..................................................
FD578115       <-- ..................................................
FD533315       <-- ..................................................
EY939392       <-- ..................................................
EV548464       <-- ..................................................
FY436904       <-- ..................................................
FD583351       --> TGTCTCCAGTTCCAGGCGACTCATCTCCTTTGAAGATACCGTTGCCCGTG

               401    -    451
UN16105        --> AGCTCCTGAAACTTCTGGTCATGTATCTTCTTCGATGTCTTCACTTCAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX770197       <-- AGCTCCTGAAACTTCTGGTCAc............................
FY444727       <-- AGCTCCTGAAACTTCTGGTCATGTATCTTCTTCGATGTCTTCACTTCAGG
FY452307       <-- AGCTCCTGAAACTTCTGGTCATGTATCTTCTTCGATGTCTTCACTTCAGG
FD579352       <-- AGCTC-TGAAACTTCTGGTCATGTATCT-CTTCGATGTCTTCACTTCAGG
FY435784       <-- ..................................................
EX747569       <-- ..................................................
FD578115       <-- ..................................................
FD533315       <-- ..................................................
EY939392       <-- ..................................................
EV548464       <-- ..................................................
FY436904       <-- ..................................................
FD583351       --> AGCTCCTGAAACTTCTGGTCATGTATCTTCTTCGATGTCTTCACTTCAGG

               451    -    501
UN16105        --> CTCTTCGCTAAACAGTATGTTGCTCTGTCCTCCTGCAGGATTGGAGACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX770197       <-- ..................................................
FY444727       <-- CTCTTCGCTAAACAGTATGTTGCTCTGTCCTCCTGCAGGATTGGAGACTT
FY452307       <-- CTCTTCGCTAAACAGTATGTTGCTCTGTCCTCCTGCAGGATTGGAGACTT
FD579352       <-- CTCTTCGCTAAACAGTATGTTGCTCTGTC-T-CTGCAGGATTGGAGACTT
FY435784       <-- ..............GTATGTTGCTCTGTCCTCCTGCAGGATTGGAGACTT
EX747569       <-- ....................................AGGATTGGAGACTT
FD578115       <-- ..................................................
FD533315       <-- ..................................................
EY939392       <-- ..................................................
EV548464       <-- ..................................................
FY436904       <-- ..................................................
FD583351       --> CTCTTCGCTAAACAGTATGTTGCTCTGTCCTCCTGCAGGATTGGAGACTT

               501    -    551
UN16105        --> TAACAGAAGTGCGTAGGTTCCTCGGTGCAGGCTCTCCCATGTCTCTGTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX770197       <-- ..................................................
FY444727       <-- TAACAGAAGTGCGTAGGTTCCTCGGTGCAGGCTCTCCCATGTCTCTGTTA
FY452307       <-- TAACAGAAGTGCGTAGGTTCCTCGGTGCAGGCTCTCCCATGTCTCTGTTA
FD579352       <-- TAACAGAAGTGCGTAGGTTCCTCGGTGCAGGCTCTCCCATGTCTCTGTTA
FY435784       <-- TAACAGAAGTGCGTAGGTTCCTCGGTGCAGGCTCTCCCATGTCTCTGTTA
EX747569       <-- TAACAGAAGTGCGTAGGTTCCTTGGTGCAGGCTCTCCCATGTCTCTGTTA
FD578115       <-- ....................CTCGGTGCAGGCTCCCCCATGTCTCTGTTA
FD533315       <-- ........................GTGCAGGCTCTCCCATGTCTCTGTTA
EY939392       <-- ..........................GCAGGCTCCCCCATGTCTCTGTTA
EV548464       <-- ..................................................
FY436904       <-- ..................................................
FD583351       --> TAACAGAAGTGCGTAGGTTCCTCGGTGCAGGCTCTCCCATGTCTCTGTTA

               551    -    601
UN16105        --> CCTCT---AGCTTCTTGATGAGCAGCAGCCAAGGACCGAGGCTGAATCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX770197       <-- ..................................................  Raphanus raphanistrum subsp. landra
FY444727       <-- CCTCT---AGCTTCTTGATGAGCAGCAGCCAAGGACCGAGGCTGAATCTC  Raphanus sativus cv GSK3-1
FY452307       <-- CCTCT---AGCTTCTTGATGAGCAGCAGCCAAGGACCGAGGCTGAATCTC  Raphanus sativus cv GSK3-1
FD579352       <-- CCTCT---AGCTTCTTGATGAGCAGCAGCCAAGGACCGAGGCTGAATCTC  Raphanus sativus cv Rat-Tail Radish #3870
FY435784       <-- CCTCT---AGCTTCTTGATGAGCAGCAGCCAAGGACCGAGGCTGAATCTC  Raphanus sativus cv GSK3-1
EX747569       <-- CCTCT---AGCTTCTTGATGTGCAGCGGCCAAGGATCGAGGCTGAATCTC  Raphanus raphanistrum subsp. maritimus
FD578115       <-- CCTCTTCTAGCTTCTTG---TTCAGCAGCCAAGGACCGAGGCTGAATCTC  Raphanus sativus cv Rat-Tail Radish #3870
FD533315       <-- CCTCT---AGCTTCTTGATGTGCAGCGGCCAAGGATCGAGGCTGAATCTC  Raphanus raphanistrum subsp. maritimus
EY939392       <-- CCTCTTCTAGCTTCTTG---TTCAGCAGCCAAGGACCGAGGCTGAATCTC  Raphanus sativus cv Early Scarlet Globe
EV548464       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY436904       <-- ..................................................  Raphanus sativus cv GSK3-1
FD583351       --> CCTCT---AGCTTCTTGATGAGCAGCAGCCAAGGACCGAGGCTGAATCTC  Raphanus sativus cv Rat-Tail Radish #3870

               601    -    651
UN16105        --> AGTTGGAGGTCCGAAGATGTTGTGACCGCTTATCTCTTCGATCTTAGCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX770197       <-- ..................................................
FY444727       <-- AGT-GGAGGTCCGAAGATG...............................
FY452307       <-- AGTTGGAGGTCCGAAGATGTTGTGACCGCTTATCTCTTCGATCTTAGCAC
FD579352       <-- AGTTGGAGGTCCGAAGATGTTGTGACCGCTTATCTCTTCGATCTTAGCAC
FY435784       <-- AGTTGGAGGTCCGAAGATGTTGTGACCGCTTATCTCTTCGATCTTAGCAC
EX747569       <-- AGTTGGAGGTCCGAAGATGTTGTGACCGCTTATCTCTTCGATCTTAGCAC
FD578115       <-- AGTTGGAGGTCCAAAGATGTTGTGACCGCTTATCTCTTCGATCTTAGCAC
FD533315       <-- GGTTGGAGGTCCGAAGATGTTGTGACCGCTTATCTCTTCGATCTTAGCAC
EY939392       <-- AGTTGGAGGTCCGAAGATGTTGTGACCGCTTATCTCTTCGATCTTAGCAC
EV548464       <-- ..................................................
FY436904       <-- ..................................................
FD583351       --> AGTTGGAGGTCCGAAGATGTTGTGACCGCTTATCTCTTCGATCTTAGCAC

               651    -    701
UN16105        --> TTGAGATCTGCTTCTTGCTCTTCAAGTCTGCCTCGGTGAGCAAGTTCCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX770197       <-- ..................................................
FY444727       <-- ..................................................
FY452307       <-- TTGAGATCTGCTTCTTGCTCTTCAAGTCTGCCTCGGTGAGCAAGTTCCCG
FD579352       <-- TTGAGATCTGCTTCTTGCTCTTCAAGTCTGCCTCGGTGAGCAAGTTCCCG
FY435784       <-- TTGAGATCTGCTTCTTGCTCTTCAAGTCTGCCTCGGTGAGCAAGTTCCCG
EX747569       <-- TTGAGATCTGCTTCTTGCTCTTCAAGTCTGCCTCGGTAAGCAAGTTCCCG
FD578115       <-- TTGAGATCTGCTTCTTGCTCTTCAAGTCTGCCTCGGTCAGCAAGTTCCCG
FD533315       <-- TTGAGATCTGCTTCTTGCTCTTCAAGTCTGCCTCGGTAAGCAAGTTCCCG
EY939392       <-- TTGAGATCTGCTTCTTGCTCTTCAAGTCTGCCTCGGTCAGCAAGTTCCCG
EV548464       <-- .........GCTTCTTGCTCTTCAAGTCTGCCTCGGTGAGCAAGTTCCCG
FY436904       <-- ..................................................
FD583351       --> TTGAGATCTGCTTCTTGCTCTTCAAGTCTGCCTCGGTGAGCAAGTTCCCG

               701    -    751
UN16105        --> CTCAGCTCTCTCTGCTTTGCAACCTCGGTTAAAGTGGTTGGTTTCTTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX770197       <-- ..................................................
FY444727       <-- ..................................................
FY452307       <-- CTCAGCTCTCTCTGCTTTGCAACCTCGGTTAAAGTGGTTGGTTTCTTTGG
FD579352       <-- CTCAGCTCTCTCTGCTTTGCAACCTCGGTTAAAGTGGTTGGTTTCTTTGG
FY435784       <-- CTCAGCTCTCTCTGCTTTGCAACCTCGGTTAAAGTGGTTGGTTTCTTTGG
EX747569       <-- CTCAGCTCTCTCTGCTTTGCAACCTCGGTTAAAGTGGTTGGTTTCTTTGG
FD578115       <-- CTCAGCTCTCTCTGCTTTGCAACCTCGGTTAAAGTGGTTGGTTTCTTTGG
FD533315       <-- CTCAGTTCTCTCTGCTTTGCAACCTCGGTTAAAGTGGTTGGTTTCTTTGG
EY939392       <-- CTCAGCTCTCTCTGCTTTGCAACCTCGGTTAAAGTGGTTGGTTTCTTTGG
EV548464       <-- CTCAGCTCTCTCTGCTTTGCAACCTCGGTTAAAGTGGTTGGTTTCTTTGG
FY436904       <-- ..................................................
FD583351       --> CTCAGCTCTCTCTGCTTTGCAACCTCGGTTAAAGTGGTTGGTTTCTTTGG

               751    -    801
UN16105        --> GGAAACATTCCCGTCAGCGCTGAATGATATCTGACTCACTCCGTTTAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX770197       <-- ..................................................
FY444727       <-- ..................................................
FY452307       <-- GGAAACATTCCCGTCAGCGCTGAATGATATCTGACTCACTCCGTTTAGAG
FD579352       <-- GGAAACATTCCCGTCAGCGCTGAATGATATCTGACTCACTCCGTTTAGAG
FY435784       <-- GGAAACATTCCCGTCAGCGCTGAATGATATCTGACTCACTCCGTTTAGAG
EX747569       <-- GGAAACATTCCCGTCAGCGCTGAATGATATCTGACTCACTCCGTTTAGAG
FD578115       <-- GGAAACATTCCCGTCAGCGCTGAAAGATATCTGACTCACTCCGTTCAGAG
FD533315       <-- GGAAACATTCCCGTCAGCGCTGAATGATATCTGACTCACTCCGTTTAGAG
EY939392       <-- GGAAACATTCCCGTCAGCGCTGAAGGATATCTGACTCACTCCGTTCAGAG
EV548464       <-- GGAAACATTCCCGTCAGCGCTGAATGATATCTGACTCACTCCGTTTAGAG
FY436904       <-- ..................................................
FD583351       --> GGAAACATTCCCGTCAGCGCTGAATGATATCTGACTCACTCCGTT.....

               801    -    851
UN16105        --> TTTGTTGATAGTAACGAAGTCCAGTCTTTGGATCAGTAGAAGCATAATCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX770197       <-- ..................................................
FY444727       <-- ..................................................
FY452307       <-- TTTGTTGATAGTAACGAAGTCCAGTCTTTGGATCAGTAGAAGCATAATCG
FD579352       <-- TTTGTTGATAGTAATGAAGTCCAGTCTTTGGATCAGTAGAAGCATAATCG
FY435784       <-- TTTGTTGATAGTAACGAAGTCCAGTCTTTGGATCAGTAGAAGCATAATCG
EX747569       <-- TTTGTTGATAGTAACGAAGTCCAGTCTTTGGATCAGTAGAAGCATAATCG
FD578115       <-- TTTGTTGATAGTAACGAAGTCCAGTCTTTGGATAAGTAGAAGCATAATCG
FD533315       <-- TTTGTTGATAGTAACGAAGTCCAGTCTTTGGGTCAGTAGAAGCATAATCG
EY939392       <-- TTTGTTGATAGTAACGAAGTCCAGTCTTTGGATCAGTAGAAGCATAATCG
EV548464       <-- TTTGTTGATAGTAACGAAGTCCAGTCTTCGGATCAGTAGAAGCATAATCG
FY436904       <-- ..................................................
FD583351       --> ..................................................

               851    -    901
UN16105        --> GATTCAGATACGCCTTTGGGCTCATTGGTAAAGATGCCACTTCCAGTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX770197       <-- ..................................................
FY444727       <-- ..................................................
FY452307       <-- GATTCAGATACGCCTTTGGGCTCATTGGTAAAGATGCCACTTCCAGTCAT
FD579352       <-- GATTCAGATACGCCTTTGGGCTCATTGGTAAAGATGCCACTTCCAGTCAT
FY435784       <-- GATTCAGATACGCCTTTGGGCTCATTGGTAAAGATGCCACTTCCAGTCAT
EX747569       <-- GATTCAGATACGCCTTTGGGCTCATTGGTAAATATGCCACTTCCAGTCAT
FD578115       <-- GATTCAGAAACGCCTTTGGGCTCATTGGTAAAGATGCCACTTCCAGTCAT
FD533315       <-- GATTCAGATACGCCTTTGGGCTCATTGGTAAATATGCCACTTCCAGTCAT
EY939392       <-- GATTCAGAAACGCCTTTGGGCTCATTGGTAAAGATGCCACTTCCAGTCAT
EV548464       <-- GATTCAGATACGCCTTTGGGCTCATTGGTAAAGATGCCACTTCCAGTCAT
FY436904       <-- ..................................................
FD583351       --> ..................................................

               901    -    951
UN16105        --> CTCTTTTAACTTGTAACCTGAGCAGTTCTTCAGCTTATTGAGGGACTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX770197       <-- ..................................................
FY444727       <-- ..................................................
FY452307       <-- CTCTTTTAACTTGTAACCTGAGCAGTTCTTCAGCTTATTGAGGGACTGAG
FD579352       <-- CTCTTTTAACTTGTAACCTGAGCAGTTCTTCAGCTTATTGAGGGACTGAG
FY435784       <-- CTCTTTTAACTTGTAACCTGAGCAGTTCTTCAGCTTATTGAGGGACTGAG
EX747569       <-- CTCTTTTAACTTGTAACCTGAGCAGTTCTTCAGCTTATTGAGGGACTGAG
FD578115       <-- CTCTTTTAACTTGTAACCTGAGCAGTTCTTCAGCTTATTGAGGGACTGAG
FD533315       <-- CTCTTTTAACTTGTAACCTGAGCAGTTCTTCAGCTTATTGAGGGACTGAG
EY939392       <-- CTCTTTTAACTTGTAACCTGAGCAGTTCTTCAGCTTATTGAGGGACTGAG
EV548464       <-- CTCTTTTAACTTGTAACCTGAGCAGTTCTTCAGCTTATTGAGGGACTGAG
FY436904       <-- ..................................................
FD583351       --> ..................................................

               951    -   1001
UN16105        --> CTTCCTCGTCTGTGATCTGACCGCCGCCAAGAACCTTGCTGATTCCATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX770197       <-- ..................................................
FY444727       <-- ..................................................
FY452307       <-- CTTCCTCGTCTGTGATCTGACCGCCGCCAAGAACCTTGCTGATTCCATCT
FD579352       <-- CTTCCTCGTCTGTGATCTGACCGCCGCCAAGAACCTTGCTGATTCCATCT
FY435784       <-- CTTCCTCGTCTGTGATCTGACCGCCGCCAAGAACCTTGCTGATTCCATCT
EX747569       <-- CTTCCTCTTCTGTGATCTGACCGCCGCCAAGAACCTTGCTGATTCCATCT
FD578115       <-- CTTCCTCGTCTGTGATCTGACCGCCGCCAAGAACCTTGCTGATTCCATCT
FD533315       <-- CTTCCTCTTCTGTGATCTGACCGCCGCCAAGAACCTTGCTGATTCCATCT
EY939392       <-- CTTCCTCGTCTGTGATCTGACCGCCGCCAAGAACCTTGCTGATTCCATCT
EV548464       <-- CTTCCTCGTCTGTGATCTGACCGCCGCCAAGAACCTTGCTGATTCCATCT
FY436904       <-- ..................................................
FD583351       --> ..................................................

               1001   -   1051
UN16105        --> GACGGCTGGTGAGAACGAGCGGCGGAAGAGGAAGAGTGATCAAGAAGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX770197       <-- ..................................................  Raphanus raphanistrum subsp. landra
FY444727       <-- ..................................................  Raphanus sativus cv GSK3-1
FY452307       <-- GACGGCTGGTGAGAACGAGCGGCGGAAGAGGAAGAGTGATCA-GAAGGAG  Raphanus sativus cv GSK3-1
FD579352       <-- GACGGCTGGTGAGAACGAGCGGCGGAAGAGGAAGAGTGATCA-GAAGGAG  Raphanus sativus cv Rat-Tail Radish #3870
FY435784       <-- GACGGCTGGTGAGAACGAGCGGCGGAAGAGGAAGAGTGATCA-GAAGGAG  Raphanus sativus cv GSK3-1
EX747569       <-- GACGGCTGGTGAGAACGAGCGGCGGAAGAGGATGAGTGATCAAGA-GGAG  Raphanus raphanistrum subsp. maritimus
FD578115       <-- GACGGCTGGTGAGAACGAGCGGCGGAAGAGGAAGAGTGATCAAGA-GGAG  Raphanus sativus cv Rat-Tail Radish #3870
FD533315       <-- GACGGCTGGTGAGAACGAGCGGCGGAAGAGGATGAGTGATCAAGA-GGAG  Raphanus raphanistrum subsp. maritimus
EY939392       <-- GACGGCTGGTGAGAACGAGCGGTGGAAGAGGAAGAGTGATCAAGA-GGAG  Raphanus sativus cv Early Scarlet Globe
EV548464       <-- GACGGCTGGTGAGAACGAGCGGCGGAAGAGGAAGAGTGATCA-GAAGGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY436904       <-- ..................................................  Raphanus sativus cv GSK3-1
FD583351       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               1051   -   1101
UN16105        --> GAGGAGTTTCCGACCAGGAAAGCAGATCGGCGGTGGAAGTGTGAGGGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX770197       <-- ..................................................
FY444727       <-- ..................................................
FY452307       <-- GAGGAGTTTCCGACCAGGAAAGCAGATCGGCGGTGGAAGTGTGAGGGTTT
FD579352       <-- GAGGAGTTTCCGACCAGGAAAGCAGATCGGCGGTGGAAGCGTGAGGGTTT
FY435784       <-- GAGGAGTTTCCGACCAGGAAAGCAGATCGGCGGTGGAAGTGTGAGGGTTT
EX747569       <-- GAGGAGTTTCGGACCAGGAAAGCAGATCGGCGGTGGAAGTGTGAGGGTTT
FD578115       <-- GAGGAGTTTCCGACCAGGAAAGCAGATCGGCGGTGGAAGTGTGAGGGTTT
FD533315       <-- GAGGAGTTTCGGACCAGGAAAGCAGATCGGCGGTGGAAGTGTGAGGGTTT
EY939392       <-- GAGGAGTTTCCGACCAGGAAAGCAGATCGGCGGTGGAAGTGTGAGGGTCT
EV548464       <-- GAGGAGTTTCCGACCAGGAAAGCAGATCGGCGGTGGAAGTGTGAGGGTTT
FY436904       <-- ...GAGTTTCCGACCAGGAAAGCAGATCGGCGGTGGAAGTGTGAGGGTTT
FD583351       --> ..................................................

               1101   -   1151
UN16105        --> CTCACTGGCGTGCTTCTCTCCATCTTTCTTTCTTAACTGTTTTTTTTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX770197       <-- ..................................................  Raphanus raphanistrum subsp. landra
FY444727       <-- ..................................................  Raphanus sativus cv GSK3-1
FY452307       <-- CTCACTGGCG-GCTTCTCTCCATCTTcttct...................  Raphanus sativus cv GSK3-1
FD579352       <-- CTCACTGGCGTGCTTCTCTCCATCTTTCTTTCTTAACTGTTTTTTTTTCT  Raphanus sativus cv Rat-Tail Radish #3870
FY435784       <-- CTCACTGGCGTGCTTCTCTCCATCTTTCTTTCTTAACTGTTTTTTTTTCT  Raphanus sativus cv GSK3-1
EX747569       <-- CTCACTGGTGTGCTTCTCTCCATCTTTCTTTCT-AACTGTTTTTTTTTCT  Raphanus raphanistrum subsp. maritimus
FD578115       <-- CTCACTGGTGTGCTTCTCTCCATCTTTCTTTCT-AACTGTTTTTTTT-CT  Raphanus sativus cv Rat-Tail Radish #3870
FD533315       <-- CTCACTGGTGTGCTTCTCTCCATCTTTCTTTCT-AACTGTTTTTTTTTCT  Raphanus raphanistrum subsp. maritimus
EY939392       <-- CTCACTGGTGTGCTTCTCTCCATCTTTCTTTCT-AACTGTTTTTTTTTCT  Raphanus sativus cv Early Scarlet Globe
EV548464       <-- CTCACTGGCGTGCTTCTCTCCATCTTTCTTTCTTAACTGTTTTTTTTTtc  Raphanus raphanistrum subsp. raphanistrum (NY)
FY436904       <-- CTCACTGGCGTGCTTCTCTCCATCTTTCTTTCTTAACTGTTTTTTTTctt  Raphanus sativus cv GSK3-1
FD583351       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               1151   -   1201
UN16105        --> TTTTTCAAAAGCTTTTTTCTTCCGATCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX770197       <-- .............................
FY444727       <-- .............................
FY452307       <-- .............................
FD579352       <-- TTcagaaaaa...................
FY435784       <-- TTcagaaa.....................
EX747569       <-- TTTTTCAAAAGCTTTTTTCTTCCGATCTC
FD578115       <-- TTTTTC.......................
FD533315       <-- TTTTTCAAAAGCTTTTT............
EY939392       <-- TTTTTCTAAAGCTTTT.............
EV548464       <-- tttccc.......................
FY436904       <-- tcag.........................
FD583351       --> .............................