Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN16112

               1      -     51
UN16112        --> AAACAACAATATTGAAAAAGTCAAGCTTTCTACTTTTATTGAGTTTATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD963588       <-- .......tttttttgAAAAGTCAAGCTT-CTACTTTTATTGAGTTTATAA
FD536512       <-- ........................................GAGTTTATAA
EY897264       <-- ..................................................
EX765954       <-- ..................................................
EW725554       <-- ..................................................
EY941068       <-- ..................................................
EX903556       <-- ..................................................
FD561592       <-- ..................................................
EX755492       <-- ..................................................
FD536192       <-- ..................................................
EX899212       --> AAACAACAATATTGAAAAAGTCAAGCTTTCTACTTT-ATTGAGTTTATAA
EX769660       --> .............GAAAAAGTCAAGCTTTCTACTTTTATTGAGTTTATAA
EY893633       --> .............GAAAAAGTCAAGCTTTCTACTTTTATTGAGTTTATAA
FD959855       --> ..............AAAAAGTCAAGCTTTCTACTTTTATTGAGTTTATAA
EW730833       --> .................AAGTCAAGCTTTCTACTTT-ATTGAGTTTATAA
FY428340       --> ......................cAGCTTTCT-C-TTTATTGAGTTTATAA
FD565711       --> ........................GCTTTCTACTTTTATTGAGTTTATAA
FY428358       --> ..........................gctttctcTTTATTGAGTTTATAA
EX907596       --> ........................................GAGTTTATAA
FD531959       --> ........................................GAGTTTATAA
EW728674       --> ..................................................

               51     -    101
UN16112        --> ATATAATTACCGATTACATTACATATCCAAAAGAGCTCATACATCAACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD963588       <-- ATATAATTACCGATTACATTACATATCCAAAAGAGCTCATACATCAACTC  Raphanus raphanistrum subsp. maritimus
FD536512       <-- ATATAATTACCGATTACATTACATATCCAAAAGAGCTCATACATCAACTC  Raphanus raphanistrum subsp. maritimus
EY897264       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX765954       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725554       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY941068       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX903556       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD561592       <-- ..................................................  Raphanus sativus var. oleiformis
EX755492       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536192       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX899212       --> ATATAACTACTGATTACATTACATATCCAAAGGAGCTCATACATCAACTC  Raphanus sativus cv Early Scarlet Globe
EX769660       --> ATATAGTTACCGATTACATTACATATCCAAAAGAGCTCATACATCAACTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893633       --> ATATAATTACCGATTACATTACATATCCAAAAGAGCTCATACATCAACTC  Raphanus raphanistrum subsp. maritimus
FD959855       --> ATATAATTACCGATTACATTACATATCCAAAAGAGCTCATACATCAACTC  Raphanus raphanistrum subsp. maritimus
EW730833       --> ATATAACTACTGATTACATTACATATCCAAAAGAGCTCATACATCAACTC  Raphanus sativus cv Early Scarlet Globe
FY428340       --> ATATAACTACTGATTACATTACATATCCAAAAGAGCTCATACATCAACTC  Raphanus sativus cv GSK3-1
FD565711       --> ATATAATTACCGATTACATTACATATCCAAAAGAGTTCATACTTCAACTC  Raphanus sativus var. oleiformis
FY428358       --> ATATAACTACTGATTACATTACATATCCAAAAGAGCTCATACATCAACTC  Raphanus sativus cv GSK3-1
EX907596       --> ATATAATTACCGATTACATTACATATCCAAAAGAGCTCATACATCAACTC  Raphanus sativus cv Rat-Tail Radish #3870
FD531959       --> ATATAATTACCGATTACATTACATATCCAAAAGAGCTCATACATCAACTC  Raphanus raphanistrum subsp. maritimus
EW728674       --> .....acTACTGATTACATTACATATCCAAAAGAGCTCATACATCAACTC  Raphanus sativus cv Early Scarlet Globe

               101    -    151
UN16112        --> AATTTTTATTAAATAACTGTAATTCATTCTTAACTGGACTATTGTCTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD963588       <-- AATTTTTATTAAATAACTGTAATTCATTCTTAACTGGACTATTGTCTTCT  Raphanus raphanistrum subsp. maritimus
FD536512       <-- AATTTTTATTAAATAACTGTAATTCATTCTTAACTGGACTATTGTCTTCT  Raphanus raphanistrum subsp. maritimus
EY897264       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX765954       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725554       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY941068       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX903556       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD561592       <-- ..................................................  Raphanus sativus var. oleiformis
EX755492       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536192       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX899212       --> AATTTTTATTAGATAACTGTAATTCATTCTTTACTGGACTATTGTCTTCT  Raphanus sativus cv Early Scarlet Globe
EX769660       --> AATTTTTATTAAATAACTGTAATTCATTCTTAACTGGACTATTGTCTTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893633       --> AATTTTTATTAAATAACTGTAATTCATTCTTAACTGGACTATTGTCTTCT  Raphanus raphanistrum subsp. maritimus
FD959855       --> AATTTTTATTAAATAACTGTAATTCATTCTTAACTGGACTATTGTCTTCT  Raphanus raphanistrum subsp. maritimus
EW730833       --> AATTTTTATTAGATAACTGTAATTCATTCTTTACTGGACTATTGTCTTCT  Raphanus sativus cv Early Scarlet Globe
FY428340       --> AATTTTTATTAGATAACTGTAATTCATTCTTTACTGGACTATTGTCTTCT  Raphanus sativus cv GSK3-1
FD565711       --> AATTTTTATTAAATAACTGTAATTCATTCTTAACTGGACTATTGTCTTCT  Raphanus sativus var. oleiformis
FY428358       --> AATTTTTATTAGATAACTGTAATTCATTCTTTACTGGACTATTGTCTTCT  Raphanus sativus cv GSK3-1
EX907596       --> AATTTTTATTAGATAACTGTAATTCATTCTTAACTGGACTATTGTCTTCT  Raphanus sativus cv Rat-Tail Radish #3870
FD531959       --> AATTTTTATTAAATAACTGTAATTCATTCTTAACTGGACTATTGTCTTCT  Raphanus raphanistrum subsp. maritimus
EW728674       --> AATTTTTATTAGATAACTGTAATTCATTCTTTACTGGACTATTGTCTTCT  Raphanus sativus cv Early Scarlet Globe

               151    -    201
UN16112        --> TTATTATGATGCACCTGAACAGGTTTATATGTGTAAATCTTGGCACACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD963588       <-- TTATTATGATGCACCTGAACAGGTTTATATGTGTAAATCTTGGCACACCA
FD536512       <-- TTATTATGATGCACCTGAACAGGTTTATATGTGTAAATCTTGGCACACCA
EY897264       <-- ...................CAGGTTTATATGTGTAAATCTTGGCACACCA
EX765954       <-- ..................................................
EW725554       <-- ..................................................
EY941068       <-- ..................................................
EX903556       <-- ..................................................
FD561592       <-- ..................................................
EX755492       <-- ..................................................
FD536192       <-- ..................................................
EX899212       --> TTATTATGATGCACCTGAACAGGTTTATATGTGTAAATCTTGGCACACCA
EX769660       --> TTATTATGATGCACCTGAACAGGTTTATATGTGTAAATCTTGGCACACCA
EY893633       --> TTATTATGATGCACCTGAACAGGTTTATATGTGTAAATCTTGGCACACCA
FD959855       --> TTATTATGATGCACCTGAACAGGTTTATATGTGTAAATCTTGGCACACCA
EW730833       --> TTATTATGATGCACCTGAACAGGTTTATATGTGTAAATCTTGGCACACCA
FY428340       --> TTATTATGATGCACCTGAACAGGTTTATATGTGTAAATCTTGGCACACCA
FD565711       --> TTAT..............................................
FY428358       --> TTATTATGATGCACCTGAACAGGTTTATATGTGTAAATCTTGGCACACCA
EX907596       --> TTATTATGATGCACCTGAACAGGTTTATATGTGTAAATCTTGGCACACCA
FD531959       --> TTATTATGATGCACCTGAACAGGTTTATATGTGTAAATCTTGGCACACCA
EW728674       --> TTATTATGATGCACCTGAACAGGTTTATATGTGTAAATCTTGGCACACCA

               201    -    251
UN16112        --> TAGATAGTATACAAGGTTAACGGCTTGTAACACAGTGATCACCCAGTAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD963588       <-- TAGATAGTATACAAGGTTAACGGCTTGTAAAACAGTGATCACCCAGTAAA
FD536512       <-- TAGATAGTATACAAGGTTAACGGCTTGTAACACAGTGATCACCCAGTAAA
EY897264       <-- TAGATAGTATACAAGGTTAACGGCTTGTAACACAGTGATCACCCAGTAAA
EX765954       <-- ..................................................
EW725554       <-- ..................................................
EY941068       <-- ..................................................
EX903556       <-- ..................................................
FD561592       <-- ..................................................
EX755492       <-- ..................................................
FD536192       <-- ..................................................
EX899212       --> TAAATAGTATACGAGGTTAACGGCTTGTAACACAGTGATCACCCGGTAAA
EX769660       --> TAGATAGTATACAAGGTTAACGGCTTGTAACACAGTGATCACCCAGTAAA
EY893633       --> TAGATAGTATACAAGGTTAACGGCTTGTAACACAGTGATCACCCAGTAAA
FD959855       --> TAGATAGTATACAAGGTTAACGGCTTGTAAAACAGTGATCACCCAGTAAA
EW730833       --> TAGATAGTATACAAGGTTAACGGCTTGTAACACAGTGATCACCCAGTAAA
FY428340       --> TAGATAGTATACAAGGTTAACGGCTTGTAACACAGTGATCACCCAGTAAA
FD565711       --> ..................................................
FY428358       --> TAGATAGTATACAAGGTTAACGGCTTGTAACACAGTGATCACCCAGTAAA
EX907596       --> TAGATAGTATACAAGGTTAACGGCTTGTAACACAGTGATCACCCAGTAAA
FD531959       --> TAGATAGTATACAAGGTTAACGGCTTGTAACACAGTGATCACCCAGTAAA
EW728674       --> TAAATAGTATACAAGGTTAACGGCTTGTAACACAGTGATCACCCAGTAAA

               251    -    301
UN16112        --> AATACTCAAGTCTTCCACGGTTTAGATTGTTATCTGGTAACCAATTGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD963588       <-- AATACTCAAGTCTTCCACGGTTTAGATTGTTATCTGGTAACCAATTGTTT  Raphanus raphanistrum subsp. maritimus
FD536512       <-- AATACTCAAGTCTTCCACGGTTTAGATTGTTATCTGGTAACCAATTGTTT  Raphanus raphanistrum subsp. maritimus
EY897264       <-- AATACTCAAGTCTTCCACGGTTTAGATTGTTATCTGGTAACCAATTGTTT  Raphanus raphanistrum subsp. maritimus
EX765954       <-- ......CAAGTCTTC-ACGGTT-AGATTGT-ATCTG-TAACCAATTGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725554       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY941068       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX903556       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD561592       <-- ..................................................  Raphanus sativus var. oleiformis
EX755492       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536192       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX899212       --> AATACTCAAGCCTTCCACGGTTTAAATTGTTATCTGGTAACCAATTGCTT  Raphanus sativus cv Early Scarlet Globe
EX769660       --> AATACTCAAGTCTTCCACGGTTTAGATTGTTATCTGGTAACCAATTGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893633       --> AATACTCAAGTCTTCCACGGTTTAGATTGTTATCTGGTAACCAATTGTTT  Raphanus raphanistrum subsp. maritimus
FD959855       --> AATACTCAAGTCTTCCACGGTTTAGATTGTTATCTGGTAACCAATTGTTT  Raphanus raphanistrum subsp. maritimus
EW730833       --> AATACTCAAGCCTTCCACGGTTTAGATTGTTATCTGGTAACCAATTGCTT  Raphanus sativus cv Early Scarlet Globe
FY428340       --> AATACTCAAGCCTTCCACGGTTTAGATTGTTATCTGGTAACCAATTGCTT  Raphanus sativus cv GSK3-1
FD565711       --> ..................................................  Raphanus sativus var. oleiformis
FY428358       --> AATACTCAAGCCTTCCACGGTTTAGATTGTTATCTGGTAACCAATTGCTT  Raphanus sativus cv GSK3-1
EX907596       --> AATACTCAAGCCTTCCACGGTTTAGATTGTTATCTGGTAACCAATTGCTT  Raphanus sativus cv Rat-Tail Radish #3870
FD531959       --> AATACTCAAGTCTTCCACGGTTTAAATTGTTATCTGGTAACCAATTGTTT  Raphanus raphanistrum subsp. maritimus
EW728674       --> AATACTCAAGCCTTCCACGGTTTAGATTGTTATCTGGTAACCAATTGCTT  Raphanus sativus cv Early Scarlet Globe

               301    -    351
UN16112        --> CCATCTGGTTTAGCGCTGAATTTATGAACCAACGTCACAAGCAAAGTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD963588       <-- CCATCTGGTTTAGCGCTGAATTTATGAACCAACGTCACAAGCAAAGTGCT  Raphanus raphanistrum subsp. maritimus
FD536512       <-- CCATCTGGTTTAGCGCTGAATTTATGAACCAACGTCACAAGCAAAGTGCT  Raphanus raphanistrum subsp. maritimus
EY897264       <-- CCATCTGGTTTAGCGCTGAATTTATGAACCAACGTCACAAGCAAAGTGCT  Raphanus raphanistrum subsp. maritimus
EX765954       <-- CCATCTG-TTTAGCGCTGAATTTATGAACCAACGTCACAAGCAAGGTGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725554       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY941068       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX903556       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD561592       <-- ..................................................  Raphanus sativus var. oleiformis
EX755492       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536192       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX899212       --> CCATCTGGTTTAATGCTGAATTTATGAACCAACGTCACAAGCAAAGTGCT  Raphanus sativus cv Early Scarlet Globe
EX769660       --> CCATCTGGTTTAGCGCTGAATTTATGAACCAACGTCACAAGCAAGGGGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893633       --> CCATCTGGTTTAGCGCTGAATTTATGAACCAACGTCACAAGCAAAGTGCT  Raphanus raphanistrum subsp. maritimus
FD959855       --> CCATCTGGTTTAGCGCTGAATTTATGAACCAACGTCACAAGCAAAGTGCT  Raphanus raphanistrum subsp. maritimus
EW730833       --> CCATCTGGTTTAATGCTGAATTTATGAACCAACGTCACAAGCAAAGTGCT  Raphanus sativus cv Early Scarlet Globe
FY428340       --> CCATCTGGTTTAGTGCTGAATTTATGAACCAACGTCACAAGCAAAGTGCT  Raphanus sativus cv GSK3-1
FD565711       --> ..................................................  Raphanus sativus var. oleiformis
FY428358       --> CCATCTGGTTTAGTGCTGAATTTATGAACCAACGTCACAAGCAAAGTGCT  Raphanus sativus cv GSK3-1
EX907596       --> CCATCTGGTTTAGCGCTGAATTTATGAACCAACGTCACGAGCAAAGTGCT  Raphanus sativus cv Rat-Tail Radish #3870
FD531959       --> CCATCTGGTTTAGCGCTGAATTTATGAACCAACGTCACAAGCAAAGTGCT  Raphanus raphanistrum subsp. maritimus
EW728674       --> CCATCTGGTTTAATGCTGAATTTATGAACCAACGTCACAAGCAAAGTGCT  Raphanus sativus cv Early Scarlet Globe

               351    -    401
UN16112        --> TACATAGTTCCCAATCGAAATTGCCATCCAGAACAACGCTGTTGCAGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD963588       <-- TACATAGTTCCCAATCGAAATTGCCATCCAGAACAACGCTGTTGCAGTAC
FD536512       <-- TACATAGTTCCCAATCGAAATTGCCATCCAGAACAACGCTGTTGCAGTAC
EY897264       <-- TACATAGTTCCCAATCGAAATTGCCATCCAGAACAACACTGTTGCAGTAC
EX765954       <-- TACATAGTTCCCAATCGAAATTGCCATCCAGAACAACGCTGTTGCAGTAC
EW725554       <-- ..................................................
EY941068       <-- ..................................................
EX903556       <-- ..................................................
FD561592       <-- ..................................................
EX755492       <-- ..................................................
FD536192       <-- ..................................................
EX899212       --> TACATAGTTCCCAATCGAAATTGCCATCCAGAACAACGCTGTGGCAGTAC
EX769660       --> TACATAGTTCCCAATCGAAATTGCCATCCAGAACAACGCTGTTGCAGTAC
EY893633       --> TACATAGTTCCCAATCGAAATTGCCATCCAGAACAACACTGTTGCAGTAC
FD959855       --> TACATAGTTCCCAATCGAAATTGCCATCCA....................
EW730833       --> TACATAGTTCCCAATCGAAATTGCCATCCAGAACAACGCTGTTGCAGTAC
FY428340       --> TACATAGTTCCCAATCGAAATTGCCATCCAGAACAACGCTGTTGCAGTAC
FD565711       --> ..................................................
FY428358       --> TACATAGTTCCCAATCGAAATTGCCATCCAGAACAACGCTGTTGCAGTAC
EX907596       --> TACATAGTTCCCAATCGAAATTGCCATCCAGAACAACGCTGTTGCAGTAC
FD531959       --> TACATAGTTCCCAATCGAAATTGCCATCCAGAACAACGCTGTTGCAGTAC
EW728674       --> TACATAGTTCCCAATCGAAATTGCCATCCAGAACAACGCTGTTGCAGTAC

               401    -    451
UN16112        --> TCCTCATGCTTTCTGGAGCTTGGTCGTAGAAGAACTCCATATGTCCGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD963588       <-- TCCTCATGCTTTCTGGAGCTTGGTCGTAGAAGAACTCCATATGTCCGATC  Raphanus raphanistrum subsp. maritimus
FD536512       <-- TCCTCATGCTTTCTGGAGCTTGGTCGTAGAAGAACTCCATATGTCCGATC  Raphanus raphanistrum subsp. maritimus
EY897264       <-- TCCTCATGCTTTCTGGAGCTTGGTCGTAGAAGAACTCCATATGTCCGATC  Raphanus raphanistrum subsp. maritimus
EX765954       <-- TCCTCATGCTTTCTGGAGCTTGGTCGTAGAAGAACTCCATATGTCCGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725554       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY941068       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX903556       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD561592       <-- ..................................................  Raphanus sativus var. oleiformis
EX755492       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536192       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX899212       --> TCCTCATGCTTTCTGGAGCTTGGTCGTAGAAGAACTCCATATGTCCGATT  Raphanus sativus cv Early Scarlet Globe
EX769660       --> TCCTCATGCTTTCTGGAGCTTGGTCGTAGAAGAACTCCATATGTCCGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893633       --> TCCTCATGCTTTCTGGAGCTTGGTCGTAGAAGAACTCCATATGTCCGATC  Raphanus raphanistrum subsp. maritimus
FD959855       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW730833       --> TCCTCATGCTTTCTGGAGCTTGGTCGTAGAAGAACTCCATATGTCCGATT  Raphanus sativus cv Early Scarlet Globe
FY428340       --> TCCTCATGCTTTCTGGAGCTTGGTCGTAGAAGAACTCCATATGTCCGATT  Raphanus sativus cv GSK3-1
FD565711       --> ..................................................  Raphanus sativus var. oleiformis
FY428358       --> TCCTCATGCTTTCTGGAGCTTGGTCGTAGAAGAACTCCATATGTCCGATT  Raphanus sativus cv GSK3-1
EX907596       --> TCCTCATGCTTTCTGGAGCTTGGTCGTAGAAGAACTCCATATGTCCGATC  Raphanus sativus cv Rat-Tail Radish #3870
FD531959       --> TCCTCATGCTTTCTGGAGCTTGGTCGTAGAAGAACTCCATATGTCCGATC  Raphanus raphanistrum subsp. maritimus
EW728674       --> TCCTCATGCTTTCTGGAGCTTGGTCGTAGAAGAACTCCATATGTCCGATT  Raphanus sativus cv Early Scarlet Globe

               451    -    501
UN16112        --> GACATGAAAGCCTCAGCAATTCCATGGAGACTATACTGAGGAACCAACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD963588       <-- GACATGAAAGCCTCAGCAATTCCATGGAGACTATACTGAGGAACCAACCA
FD536512       <-- GACATGAAAGCCTCAGCAATTCCATGGAGACTATACTGAGGAACCAACCA
EY897264       <-- GACATGAAAGCCTCAGCAATTCCATGGAGACTATACTGAGGAACCAACCA
EX765954       <-- GACATGAAAGCCTCAGCAATTCCATGGAGACTATACTGAGGAACCAACCA
EW725554       <-- ..................................................
EY941068       <-- ..................................................
EX903556       <-- ..................................................
FD561592       <-- ..................................................
EX755492       <-- ..................................................
FD536192       <-- ..................................................
EX899212       --> GACATGAAAGCCTCAGCAATTCCATGGAGACTATACTGAGGAACCAACCA
EX769660       --> GACATGAAAGCCTCAGCAATTCCATGGAGACTATACTGAGGAACCAACCA
EY893633       --> GACATGAAAGCCTCAGCAATTCCATGGAGACTATACTGAGGAACCAACCA
FD959855       --> ..................................................
EW730833       --> GACATGAAAGCCTCAGCAATTCCATGGAGACTATACTGAGGAACCAACCA
FY428340       --> GACATGAAAGCCTCAGCAATTCCATGGAGACTATACTGAGGAACCAACCA
FD565711       --> ..................................................
FY428358       --> GACATGAAAGCCTCAGCAATTCCATGGAGACTATACTGAGGAACCAACCA
EX907596       --> GACATGGAAGCCTCAGCAATTCCATGGAGACTATACTGAGGAACCAACCA
FD531959       --> GACATGAAAGCCTCAGCAATTCCATGGAGACTATACTGAGGAACCAACCA
EW728674       --> GACATGAAAGCCTCAGCAATTCCATGGAGACTATACTGAGGAACCAACCA

               501    -    551
UN16112        --> AAGAAACGAGATTGGAACCATTGTATGTGGTTTATCCAAAAGTCCATGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD963588       <-- AAGAAACGAGATTGGAACCATTGTATGTGGTTTATCCAAAAGTCCATGCT  Raphanus raphanistrum subsp. maritimus
FD536512       <-- AAGAAACGAGATTGGAACCATTGTATGTGGTTTATCCAAAAGTCCATGCT  Raphanus raphanistrum subsp. maritimus
EY897264       <-- AAGAAACGAGATTGGAACCATTGTATGTGGTTTATCCAAAAGTCCATGCT  Raphanus raphanistrum subsp. maritimus
EX765954       <-- AAGAAACGAGATTGGAACCATTGTATGTGGTTTATCCAAAAGTCCATGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725554       <-- ..GAAATGAGATTGGAACCATTGTATGTGGTTTATCCAAAAGTCCATGCT  Raphanus sativus cv Early Scarlet Globe
EY941068       <-- ................gaCATTGTATGTGGTTTATCCAAAAGTCCATGCT  Raphanus sativus cv Early Scarlet Globe
EX903556       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD561592       <-- ..................................................  Raphanus sativus var. oleiformis
EX755492       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536192       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX899212       --> AAGAAATGAGATTGGAACCATTGTATGTGGTTTATCCAAAAGTCCATGCT  Raphanus sativus cv Early Scarlet Globe
EX769660       --> AAGAAACGAGATTGGAACCATTGTATGTGGTTTATCCAAAAGTCCATGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893633       --> AAGAAACGAGATTGGAACCATTGTATGTGGTTTATCCAAAAGTCCATGCT  Raphanus raphanistrum subsp. maritimus
FD959855       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW730833       --> AAGAAATGAGATTGGAACCATTGTATGTGGTTTATCCAAAAGTCCATGCT  Raphanus sativus cv Early Scarlet Globe
FY428340       --> AAGAAACGAGATTGGAACCATTGTATGTGGTTTATCCAAAAGTCCATGCT  Raphanus sativus cv GSK3-1
FD565711       --> ..................................................  Raphanus sativus var. oleiformis
FY428358       --> AAGAAACGAGATTGGAACCATTGTATGTGGTTTATCCAAAAGTCCATGCT  Raphanus sativus cv GSK3-1
EX907596       --> AAGAAACGAGATTGGAACCATTGTATGTGGTTTATCCAAAAGTCCATGCT  Raphanus sativus cv Rat-Tail Radish #3870
FD531959       --> AAGAAACGAGATTGGAACCATTGTATGTGGTTTATCCAAAAGTCCATGCT  Raphanus raphanistrum subsp. maritimus
EW728674       --> AAGAAATGAGATTGGAACCATTGTATGTGGTTTATCCAAAAGTCCATGCT  Raphanus sativus cv Early Scarlet Globe

               551    -    601
UN16112        --> CTATTGCAACGTGTTTGCGTTTGATCTCAATAAATCCGGCTACAAGTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD963588       <-- CTATTGCAACGTGTTTGCATTTGATCTCAATAAATCCGGCTACAAGTGTT
FD536512       <-- CTATTGCAACGTGTTTGCGTTTGATCTCAATAAATCCGGCTACAAGTGTT
EY897264       <-- CTATTGCAACGTGTTTGCGTTTGACCTCAATAAATCCGGCTACAAGTGTT
EX765954       <-- CTATTGCAACGTGTTTGCGTTTGATCTCAATAAATCCGGCTACAAGTGTT
EW725554       <-- CTATTGCAACGTGTTTGCGTTTGATCTCAATAAATCCGGCTACAAGTGTT
EY941068       <-- CTATTGCAACGTGTTTGCGTTTGATCTCAATAAATCCGGCTACAAGTGTT
EX903556       <-- ..................................................
FD561592       <-- ..................................................
EX755492       <-- ..................................................
FD536192       <-- ..................................................
EX899212       --> CTATTGCAACGTGTTTGCGTTTGATCTCAATAAATCCGGCTACAAGTGTT
EX769660       --> CTATTGCAACGTGTTTGCGTTTGATCTCAATAAATCCGGCTACAAGTGTT
EY893633       --> CTATTGCAACGTGTTTGCGTTTGACCTCAATAAATCCGGCTACAAGTGTT
FD959855       --> ..................................................
EW730833       --> CTATTGCAACGTGTTTGCGTTTGATCTCAATAAATCCGGCTACAAGTGTT
FY428340       --> CTATTGCAACGTGTTTGCGTTTGATCTCAATAAATCCGGCTACAAGTGTT
FD565711       --> ..................................................
FY428358       --> CTATTGCAACGTGTTTGCGTTTGATCTCAATAAATCCGGCTACAAGTGTT
EX907596       --> CTATTGCAACATGTTTGCGTTTGATCTCAATAAATCCGGCTACAAGTGTT
FD531959       --> CTATTGCAACGTGTTTGCGTTTGATCTCAATAAATCCGGCTACAAGTGTT
EW728674       --> CTATTGCAACGTGTTTGCGTTTGATCTCAATAAATCCGGCTACAAGTGTT

               601    -    651
UN16112        --> GCGAAGATTGAGATTACGAAACCGATTCCCATACGATGGAGGAACGTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD963588       <-- GCGAAGATTGAGATTACGAAACCGATTCCCATACGATGGAGGAACGTGAT
FD536512       <-- GCGAAGATTGAGATTc..................................
EY897264       <-- GCGAAGATTGAGATTACGAAACCGATTCCCATACGATGGAGGAACGTGAT
EX765954       <-- GCGAAGATTGAGATTACGAAACCGATTCCCATACGATGGAGGAACGTGAT
EW725554       <-- GCGAAGATTGAGATTACGAAACCGATTCCCATACGATGGAGGAACGTGAT
EY941068       <-- GCGAAGATTGAGATTACGAAACCGATTCCCATACGATGGAGGAACGTGAT
EX903556       <-- ..................................................
FD561592       <-- ..................................................
EX755492       <-- ..................................................
FD536192       <-- ..................................................
EX899212       --> GCGAAGATTGAGATTACGAAACCGATTCCCATACGATGGAG.........
EX769660       --> GCGAAGATTGAGATTACGAAACCGATTCCCATACGATGGAGGAACGTGAT
EY893633       --> GCGAAGATTGAGATTACGAAACCGATTCCCATACGATGGAGGAACGTGAT
FD959855       --> ..................................................
EW730833       --> GCGAAGATTGAGATTACGAAACCGATTCCCATACGATGGAGGAACGTGAT
FY428340       --> GCGAAGATTGAGATTACGAAACCGATTCCCATACGATGGAGGAACGTGAT
FD565711       --> ..................................................
FY428358       --> GCGAAGATTGAGATTACGAAACCGATTCCCATACGATGGAGGAACGTGAT
EX907596       --> GCGAAGATTGAGATTACGAAACCGATTCCCATACGATGGAGGAACGTGAT
FD531959       --> GCGAAGATTGAGATTc..................................
EW728674       --> GCGAAGATTGAGATTACGAAACCGATTCCCATACGATGGAGGAACGTGAT

               651    -    701
UN16112        --> GCCTCGCTCTAGACCAGTGAACTTTCTGGCAATTTTGACAAAAATACGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD963588       <-- GCCTCGCTCGAGACCAGTGAACTTTCTGGCAATTTTGACAAAAATACGGT  Raphanus raphanistrum subsp. maritimus
FD536512       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY897264       <-- GCCTCGCTCGAGACCAGTGAACTTTCTGGCAATTTTGACAAAAATACGGT  Raphanus raphanistrum subsp. maritimus
EX765954       <-- GCCTCGCTCGAGAACAGTGAACTTTCTGGCAATTTTGACAAAAATACGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725554       <-- GCTTCGCTCTAGACCAGTGAACTTTCTGGCAATTTTGACAAAAATACGGT  Raphanus sativus cv Early Scarlet Globe
EY941068       <-- GCCTCGCTCTAGACCAGTGAACTTTCTGGCAATTTTGACAAAAATACGGT  Raphanus sativus cv Early Scarlet Globe
EX903556       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD561592       <-- ..................................................  Raphanus sativus var. oleiformis
EX755492       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536192       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX899212       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX769660       --> GCCTCGCTCGAGAACAGTGAACTTTCTGGCAATTTTGACAAAAATACGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893633       --> GCCTCGCTCGAGACCAGTGAACTTTCTGGCA...................  Raphanus raphanistrum subsp. maritimus
FD959855       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW730833       --> GCTTCGCTCTAGACCAGTGAACTTTCTGGCAATTTTGACAAAAATACGGT  Raphanus sativus cv Early Scarlet Globe
FY428340       --> GCCTCGCTCTAGACCAGTGAACTTTCTGGCAATTTTGACAAAAATACGGT  Raphanus sativus cv GSK3-1
FD565711       --> ..................................................  Raphanus sativus var. oleiformis
FY428358       --> GCCTCGCTCTAGACCAGTGAACTTTCTGGCAATTTTGACAAAAATACGGT  Raphanus sativus cv GSK3-1
EX907596       --> GCCTCGCTCAAGACCAGTGAACTTTCTGGCAATTTTGACAAAAATACGGT  Raphanus sativus cv Rat-Tail Radish #3870
FD531959       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW728674       --> GCCTAGCTCTAGACCAGTGAAATTTCTGGCAATTTTGACAAAAATACGGT  Raphanus sativus cv Early Scarlet Globe

               701    -    751
UN16112        --> CGTAGACGACGATTGTGGAAAGCATAGCAACAGTTGTGAAGACAGACATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD963588       <-- CGTAGACGACGATTGTGGAAAGCATAGCAACAGTTGTGAAGACAGATATT
FD536512       <-- ..................................................
EY897264       <-- CGTAGACGACGATTGTGGAAAGCATAGCAACAGTTGTGAAGACAGACATT
EX765954       <-- CGTAGACGACGATTGTGGAAAGCATAGCAACAGTTGTGAAGACAGACATT
EW725554       <-- CGTAGACGACGATTGTGGAAAGCATAGCAACAGTTGTGAAGACAGACATT
EY941068       <-- CGTAGACGACGATTGTGGAAAGCATAGCAACAGTTGTGAAGACAGACATT
EX903556       <-- ..............................................CATT
FD561592       <-- ..................................................
EX755492       <-- ..................................................
FD536192       <-- ..................................................
EX899212       --> ..................................................
EX769660       --> CGTAGACGACGATTGTGGAAAGCATAGCAACAGTTGTGAA..........
EY893633       --> ..................................................
FD959855       --> ..................................................
EW730833       --> CGTAGACGACGATTGTGGAAAGCATAGCAACAGTTGTGAAGACAGACATT
FY428340       --> CGTAGACGACGATTGTGGAAAGCATAGCAACAGTTGTGAAGACAGACATT
FD565711       --> ..................................................
FY428358       --> CGTAGACGACGATTGTGGAAAGCATAGCAACAGTTGTGAAGACAGACATT
EX907596       --> CGTAGACGACGATTGTAGAAAGCATAGCAACAGTTGTGAAGACAGACATT
FD531959       --> ..................................................
EW728674       --> CGTAGACGACGATTGTGGAAAGCATAGCAACAGTTGTGAAGACAGACATT

               751    -    801
UN16112        --> GAACCCGCTGGTATTTGGAATGATTTTGTTAAATGCCGATCCATAGTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD963588       <-- GAACCCGCTGGTATTTGGAATGATTTTGTTAAATGTCGATCC........  Raphanus raphanistrum subsp. maritimus
FD536512       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY897264       <-- GAACCCGCTGGTATTTGGAATGATTTTGTTAAATGTCGATCCATGGTTTT  Raphanus raphanistrum subsp. maritimus
EX765954       <-- GAACCCGCTGGTATTTGGAATGATTTTGTTAAATGTCGATCCATGGTTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725554       <-- GAACCCGCTGGTATTTGGAATGATTTTGTTAAATGCCGATCCATAGTTTT  Raphanus sativus cv Early Scarlet Globe
EY941068       <-- GAACCCGCTGGTATTTGGAATGATTTTGTTAAATGCCGATCCATAGTTTT  Raphanus sativus cv Early Scarlet Globe
EX903556       <-- GAACCCGCTGGTATTTGGAATGATTT-GTTAAATGTCGATCCATGGTTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD561592       <-- ..................................................  Raphanus sativus var. oleiformis
EX755492       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536192       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX899212       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX769660       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893633       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD959855       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW730833       --> GAACCCGCTGGTATTTGGAATGATTTTGTTAAATGCCGATCCATAGTTTT  Raphanus sativus cv Early Scarlet Globe
FY428340       --> GAACCCGCTGGTATTTGGAATGATTTTGTTAAATGCCGATCCATAGTTTT  Raphanus sativus cv GSK3-1
FD565711       --> ..................................................  Raphanus sativus var. oleiformis
FY428358       --> GAACCCGCTGGTATTTGGAATGATTTTGTTAAATGCCGATCCATAGTTTT  Raphanus sativus cv GSK3-1
EX907596       --> GAACCCGCTGGTATTTGGAATGATTTTGTTAAATGTCGATCCATGGTTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD531959       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW728674       --> GAACCCGCTGGTATTTGGAATGATTTTGTTAAATGCCGATCCATAGTTTT  Raphanus sativus cv Early Scarlet Globe

               801    -    851
UN16112        --> GGCTTGCTGAAGAGAAAATGTTCCTTGTTGAGCATAGGCGGTAATTAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD963588       <-- ..................................................
FD536512       <-- ..................................................
EY897264       <-- GGTTTGCTGAAGAGAAAATGTTCCTTGTTGAGCATAGGCGGTAc......
EX765954       <-- GGCTTGCTGAAGAGAAAATGTTCCTTGTTGAGCATAGGCGGTAATTAAGA
EW725554       <-- GGCTTGCTGAAGAGAAAATGTTCCTTGCTGAGCATAGGCGGTAATTAAGA
EY941068       <-- GGCTTGCTGAAGAGAAAATGTTCCTTGTTGAGCATAGGCGGTAATTAAGA
EX903556       <-- GGCTTGCTGAAGAGAAAATGTTC-TTGTTGAGCATAGGCGGTAATTAAGA
FD561592       <-- ..................................................
EX755492       <-- ..................................................
FD536192       <-- ..................................................
EX899212       --> ..................................................
EX769660       --> ..................................................
EY893633       --> ..................................................
FD959855       --> ..................................................
EW730833       --> GGC...............................................
FY428340       --> GGCTTGCTGAAGAGAAAATGTTCCTTGTTGAGCATAGGCGGTAATTA...
FD565711       --> ..................................................
FY428358       --> GGCTTGCTGAAGAGAAAATGTTCCTTGTTGAGCATAGGCGGTAATTA...
EX907596       --> GGCTTGCTGAAGAGAAAtgt..............................
FD531959       --> ..................................................
EW728674       --> GGCTTGCT-AAGAGAAAATGTTCCTTGTTGAGCA................

               851    -    901
UN16112        --> GAATACCAGAGGCTCCAATTGGACCCATTCGGATCACGGATTTGAGTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD963588       <-- ..................................................
FD536512       <-- ..................................................
EY897264       <-- ..................................................
EX765954       <-- GAATACCAGAGGCTCCAATTGGACCCATTCGGATCACGGATTTGAGTTCT
EW725554       <-- GAATACCAGAGGCTCCAATTGGACCCATTCGGATCACGGATTTGAGTTCT
EY941068       <-- GAATACCAGAGGCTCCAATTGGACCCATTCGGATCACGGATTTGAGTTCT
EX903556       <-- GAATACCAGAGGCTCCAATTGGACCCATTCGGATCACGGATTTGAGTTCT
FD561592       <-- ..................................................
EX755492       <-- ..................................................
FD536192       <-- ..................................................
EX899212       --> ..................................................
EX769660       --> ..................................................
EY893633       --> ..................................................
FD959855       --> ..................................................
EW730833       --> ..................................................
FY428340       --> ..................................................
FD565711       --> ..................................................
FY428358       --> ..................................................
EX907596       --> ..................................................
FD531959       --> ..................................................
EW728674       --> ..................................................

               901    -    951
UN16112        --> TCGACTCGGTGGACTGTATTTAGCCTCCATGGATTTGGGATTTGACCCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD963588       <-- ..................................................
FD536512       <-- ..................................................
EY897264       <-- ..................................................
EX765954       <-- TCGACTCGGTGGACTGTATTTAGCCTCCATGGATTTGGGATTTGACCCGG
EW725554       <-- TCGACTCGGTGGACTGTATTTAGCCTCCATGGATTTGGGAGTTGACCCGG
EY941068       <-- TCGACTCGGTGGACTGTATTTAGCCTCCATGGATTTGGGAGTTGACCCGG
EX903556       <-- TCGACTCGGTGGACTGTATTTAGCCTCCATGGATTTGGGATTTGACCCGG
FD561592       <-- ............................................ACCCGG
EX755492       <-- ..................................................
FD536192       <-- ..................................................
EX899212       --> ..................................................
EX769660       --> ..................................................
EY893633       --> ..................................................
FD959855       --> ..................................................
EW730833       --> ..................................................
FY428340       --> ..................................................
FD565711       --> ..................................................
FY428358       --> ..................................................
EX907596       --> ..................................................
FD531959       --> ..................................................
EW728674       --> ..................................................

               951    -   1001
UN16112        --> TTTTAAATTGTCTTGCTCAGTCACTATAGCTGCTTTATCCAAGAAACTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD963588       <-- ..................................................
FD536512       <-- ..................................................
EY897264       <-- ..................................................
EX765954       <-- TTTTAAATTGTCTTGCTCAGTCACTATAGCTGCTTTATCCAAGAAACTCA
EW725554       <-- TTTTAAATTGCCTTGCTCAGTCACTATAGCTGCTTTATCCAAGAAACTCA
EY941068       <-- TTTTAAATTGTCTTGCTCAGTCACTATAGCTGCTTTATCCAAGAAACTCA
EX903556       <-- TTTTAAATTGTCTTGCTCAGTCACTATAGCTGCTTTATCCAAGAAACTCC
FD561592       <-- TTTTAAAT-GTC-TGCTCAGTCACTATAGCTGCTTTATCCAAGAAACTCA
EX755492       <-- ..................................................
FD536192       <-- ..................................................
EX899212       --> ..................................................
EX769660       --> ..................................................
EY893633       --> ..................................................
FD959855       --> ..................................................
EW730833       --> ..................................................
FY428340       --> ..................................................
FD565711       --> ..................................................
FY428358       --> ..................................................
EX907596       --> ..................................................
FD531959       --> ..................................................
EW728674       --> ..................................................

               1001   -   1051
UN16112        --> TGTGTTTGGTGTGGGTGAGTATGCCATCCAAGGAGATAGGAGCATCAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD963588       <-- ..................................................
FD536512       <-- ..................................................
EY897264       <-- ..................................................
EX765954       <-- TGTGTTTGGTGTGGGTGAGTATGCCATC......................
EW725554       <-- TGTGTTTGGTGTGGGTGAGTATACCATCCAAGGAGATAGGAGCATCAATC
EY941068       <-- TGTGTTTGGTGTGGGTGAGTATACCATCCAAGGAGATAGGAACATCAATC
EX903556       <-- TGTGTTTGGTGTGGGTGAGTATGCCATCCAAGGAGATAGGAGCATCAATC
FD561592       <-- TGTGTTTGGTGTGGGTGAGTATGCCATCCAAGGAGATAGGAGCATCAGTC
EX755492       <-- ....TTTGGTGTGGGTGAGTATGCCATCCAAGGAGATAGGAGCATCAATC
FD536192       <-- ..................................................
EX899212       --> ..................................................
EX769660       --> ..................................................
EY893633       --> ..................................................
FD959855       --> ..................................................
EW730833       --> ..................................................
FY428340       --> ..................................................
FD565711       --> ..................................................
FY428358       --> ..................................................
EX907596       --> ..................................................
FD531959       --> ..................................................
EW728674       --> ..................................................

               1051   -   1101
UN16112        --> TCATCGTTGGTATATAGAAGAGTAGGATCAGAAACCATCCTCAGTTTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD963588       <-- ..................................................
FD536512       <-- ..................................................
EY897264       <-- ..................................................
EX765954       <-- ..................................................
EW725554       <-- TCATCGTTGGTATATAGAAGAGTAGGATCAGAAACCATCCTTAGATTCCT
EY941068       <-- TCATCGTTGGTATATAGAAGAGTAGGATCAGAAACCATCCTTAGATTCCT
EX903556       <-- TCCTCGTTGGTATATAGAAGAGTAGGATCAGAAACCATCCTCAGTTTCCT
FD561592       <-- TCATTGTTGGTATATAGAAGAGTAGGATCAGAAACCATCCTCAGTTTCCT
EX755492       <-- TCATCGTTGGTATATAGAAGAGTAGGATCAGAAACCATCCTCAGTTTCCT
FD536192       <-- ..................................................
EX899212       --> ..................................................
EX769660       --> ..................................................
EY893633       --> ..................................................
FD959855       --> ..................................................
EW730833       --> ..................................................
FY428340       --> ..................................................
FD565711       --> ..................................................
FY428358       --> ..................................................
EX907596       --> ..................................................
FD531959       --> ..................................................
EW728674       --> ..................................................

               1101   -   1151
UN16112        --> TTTACGAAACGCTGCGACTGCCACTTGGATCAAACGGGTAAATGGACTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD963588       <-- ..................................................
FD536512       <-- ..................................................
EY897264       <-- ..................................................
EX765954       <-- ..................................................
EW725554       <-- TTTACGAAACGCTGCGACTGCCACTTGGATCAAACGGGTAAATGGACTAC
EY941068       <-- TTTACGAAACGCTGCGACTGCCACTTGGATCAAACGGGTAAATGGACTAC
EX903556       <-- TTTACGAAACGCTGCGACTGCCACTTGGATCAAACGGGTAAATGGACTAC
FD561592       <-- TTTACGAAACGCTGCGACTGCCACTTGGATCAAACGGGTAAATGGACTGC
EX755492       <-- TT-----TACGCTGCGACTGCCACTTGGATCAAACGGGTAAATGGACTAC
FD536192       <-- ..................................................
EX899212       --> ..................................................
EX769660       --> ..................................................
EY893633       --> ..................................................
FD959855       --> ..................................................
EW730833       --> ..................................................
FY428340       --> ..................................................
FD565711       --> ..................................................
FY428358       --> ..................................................
EX907596       --> ..................................................
FD531959       --> ..................................................
EW728674       --> ..................................................

               1151   -   1201
UN16112        --> CCGATGGATCCAAATGACGGTAAAGCTTGAAGCCACCGACAAAAGTAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD963588       <-- ..................................................
FD536512       <-- ..................................................
EY897264       <-- ..................................................
EX765954       <-- ..................................................
EW725554       <-- CCGATGGATCCAAATGACGGTc............................
EY941068       <-- CCGATGGATCCAAATGACGGTAAAGCTTGAAGCCACCGACAAAAGTAATc
EX903556       <-- CCGATGGATCCAAATGACGGTAAAGCTTGAAGCCACCGACAAAAGTAATA
FD561592       <-- CCGATGGATCCAAATGACGGTAAAGCTTGAAGCCACCGACAAAAGTAATA
EX755492       <-- CCGATGGATCCAAATGACGGTAAAGCTTGA-GCCACCGACAAAAGTAATA
FD536192       <-- ..................................................
EX899212       --> ..................................................
EX769660       --> ..................................................
EY893633       --> ..................................................
FD959855       --> ..................................................
EW730833       --> ..................................................
FY428340       --> ..................................................
FD565711       --> ..................................................
FY428358       --> ..................................................
EX907596       --> ..................................................
FD531959       --> ..................................................
EW728674       --> ..................................................

               1201   -   1251
UN16112        --> ACGGATAAGAACATAGCTACTGTCGGGATGCCCAAACCTAAACCCCAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD963588       <-- ..................................................
FD536512       <-- ..................................................
EY897264       <-- ..................................................
EX765954       <-- ..................................................
EW725554       <-- ..................................................
EY941068       <-- ..................................................
EX903556       <-- ACGGATAAGAACATAGCTACTGTCGGGATGCCCAAACCTAAACCCCAACC
FD561592       <-- AAGGATAAGAACATAGCTACTGTCGGGATGCCCAAACCTAAACCCCAACC
EX755492       <-- ACGGATAAGAACATAGCTACTGTCGGGATGCCCAAACCTAAACCCCAACC
FD536192       <-- ..................................................
EX899212       --> ..................................................
EX769660       --> ..................................................
EY893633       --> ..................................................
FD959855       --> ..................................................
EW730833       --> ..................................................
FY428340       --> ..................................................
FD565711       --> ..................................................
FY428358       --> ..................................................
EX907596       --> ..................................................
FD531959       --> ..................................................
EW728674       --> ..................................................

               1251   -   1301
UN16112        --> AACGTTATCTTGTATGTACACAAGCACCGTCACCGCCACCAATGCTGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD963588       <-- ..................................................
FD536512       <-- ..................................................
EY897264       <-- ..................................................
EX765954       <-- ..................................................
EW725554       <-- ..................................................
EY941068       <-- ..................................................
EX903556       <-- AACGTTATCTTGTATGTACACAAGCACCGTCACCGCCACCAATGCTGCTG
FD561592       <-- AACGTTATCTTGTATGTACACAAGCACCGTCACCGCCACCAATGCTGCTG
EX755492       <-- AACGTTATCTTGTATGTACACAAGCACCGTCACCGCCACCAATGCTGCTG
FD536192       <-- ..................................................
EX899212       --> ..................................................
EX769660       --> ..................................................
EY893633       --> ..................................................
FD959855       --> ..................................................
EW730833       --> ..................................................
FY428340       --> ..................................................
FD565711       --> ..................................................
FY428358       --> ..................................................
EX907596       --> ..................................................
FD531959       --> ..................................................
EW728674       --> ..................................................

               1301   -   1351
UN16112        --> CTCCCATGCAAAAGTAGTACCAGTTGAAGTAGTTCCAGGTTTTGGTGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD963588       <-- ..................................................
FD536512       <-- ..................................................
EY897264       <-- ..................................................
EX765954       <-- ..................................................
EW725554       <-- ..................................................
EY941068       <-- ..................................................
EX903556       <-- CTCCCATGCAAAAGTAGTACCAGTTGAAGTAGTTCCAGGTTTTGGTGGCT
FD561592       <-- CTCCCATGCAAAAGTAGTACCAGTTGAAGTAGTTCCAGGTTTTGGTGGTT
EX755492       <-- CTCCCATGCAAAAGTAGTACCAGTTGAAGTAGTTCCAGGTTTTGGTGGTT
FD536192       <-- ..CCCATGCAAAAGTAGTACCAGTTGAAGTAGTTCCAGGTTTTGGTGGTT
EX899212       --> ..................................................
EX769660       --> ..................................................
EY893633       --> ..................................................
FD959855       --> ..................................................
EW730833       --> ..................................................
FY428340       --> ..................................................
FD565711       --> ..................................................
FY428358       --> ..................................................
EX907596       --> ..................................................
FD531959       --> ..................................................
EW728674       --> ..................................................

               1351   -   1401
UN16112        --> TGCTTAGGATCCGACTCATCAAACTGATCCGCACCAAAAGCAACGACACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD963588       <-- ..................................................
FD536512       <-- ..................................................
EY897264       <-- ..................................................
EX765954       <-- ..................................................
EW725554       <-- ..................................................
EY941068       <-- ..................................................
EX903556       <-- TGCTTAGGATCCGACTCATCAAACTGATCCGCACCAAAAGCAACGACACA
FD561592       <-- TGCTTAGGATCCGACTCATCAAACTGATCCGCACCAAAAGCAACGACACA
EX755492       <-- TGCTTAGGATCCGACTCATCAAACTGATCCGCACCAAAAGCAACGACACA
FD536192       <-- TGCTTAGGATCCGACTCATCAAACTGATCCGCACCAAAAGCAACGACACA
EX899212       --> ..................................................
EX769660       --> ..................................................
EY893633       --> ..................................................
FD959855       --> ..................................................
EW730833       --> ..................................................
FY428340       --> ..................................................
FD565711       --> ..................................................
FY428358       --> ..................................................
EX907596       --> ..................................................
FD531959       --> ..................................................
EW728674       --> ..................................................

               1401   -   1451
UN16112        --> AGGTCGGATCCCACCCGACCCGAGAGCTCCAAGAAGAAGAGCTATGTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD963588       <-- ..................................................
FD536512       <-- ..................................................
EY897264       <-- ..................................................
EX765954       <-- ..................................................
EW725554       <-- ..................................................
EY941068       <-- ..................................................
EX903556       <-- AGGTCGGATCCCACCCGACCCGAGAGCTCCAAGAAGAAGAGCTATGTACA
FD561592       <-- AGGTCGGATCCCACCCGACCCGAGAGCTCCAAGAAGAAGAGCTATGTACA
EX755492       <-- AGGTCGGATCCCACCCGACCCGAGAGCTCCAAGAAGAAGAGCTATGTACA
FD536192       <-- AGGTCGGATCCCACCCGACCCGAGAGCTCCAAGTAGAAGAGCTATGTACA
EX899212       --> ..................................................
EX769660       --> ..................................................
EY893633       --> ..................................................
FD959855       --> ..................................................
EW730833       --> ..................................................
FY428340       --> ..................................................
FD565711       --> ..................................................
FY428358       --> ..................................................
EX907596       --> ..................................................
FD531959       --> ..................................................
EW728674       --> ..................................................

               1451   -   1501
UN16112        --> GTATACTCAACTGTGCTGTGTCTGCTACTACACAAACCTCTTCTCCTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD963588       <-- ..................................................
FD536512       <-- ..................................................
EY897264       <-- ..................................................
EX765954       <-- ..................................................
EW725554       <-- ..................................................
EY941068       <-- ..................................................
EX903556       <-- GTATACTCAACTGTGCTGTGTCTGCTACTACACAAACC............
FD561592       <-- GTATACTCAACTGTGCTGTGTCTGCTACTACACAAACCTCTTCTCCTTTA
EX755492       <-- GTATACTCAACTGTGCTGTGTCTGCTACTACACAAACCTCTTCTCCTTTA
FD536192       <-- GTATACTCAACTGTGCTGTGTCTGCTACTACACAAACCTCTTCTCCTTTA
EX899212       --> ..................................................
EX769660       --> ..................................................
EY893633       --> ..................................................
FD959855       --> ..................................................
EW730833       --> ..................................................
FY428340       --> ..................................................
FD565711       --> ..................................................
FY428358       --> ..................................................
EX907596       --> ..................................................
FD531959       --> ..................................................
EW728674       --> ..................................................

               1501   -   1551
UN16112        --> CATGGTGGTGGCCTTAGCGTCGGCAGTATTGCTGATATCGTAAGCAGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD963588       <-- ..................................................
FD536512       <-- ..................................................
EY897264       <-- ..................................................
EX765954       <-- ..................................................
EW725554       <-- ..................................................
EY941068       <-- ..................................................
EX903556       <-- ..................................................
FD561592       <-- CATGGTGGTGGCCTTAGCGTCGGCAGTATTGCTGATATCGTAAGCAGTGT
EX755492       <-- CATGGTGGTGGCCTTAGCGTCGGCAGTATTGCTGATATCGTAAGCAGTGT
FD536192       <-- CATGGTGGTGGCCTTAGCGTCGGCAGTATTGCTGATATCGTAAGCAGTGT
EX899212       --> ..................................................
EX769660       --> ..................................................
EY893633       --> ..................................................
FD959855       --> ..................................................
EW730833       --> ..................................................
FY428340       --> ..................................................
FD565711       --> ..................................................
FY428358       --> ..................................................
EX907596       --> ..................................................
FD531959       --> ..................................................
EW728674       --> ..................................................

               1551   -   1601
UN16112        --> CATCCCTATTTGGTAGATGATGGAAGCGAACGTGATGGTCCAAAAGCGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD963588       <-- ..................................................
FD536512       <-- ..................................................
EY897264       <-- ..................................................
EX765954       <-- ..................................................
EW725554       <-- ..................................................
EY941068       <-- ..................................................
EX903556       <-- ..................................................
FD561592       <-- CATCCCTATTTGGTAGATGATGGAAGCGAACGTGATGGCCCAAAAGCGGC
EX755492       <-- CATCCCTATTTGGTAGATGATGGAAGCGAACGTGATGGTCCAAAAGCGGC
FD536192       <-- CATCCCTATTTGGTAGATGATGGAAGCGAACGTGATGGTCCAAAAGCGGC
EX899212       --> ..................................................
EX769660       --> ..................................................
EY893633       --> ..................................................
FD959855       --> ..................................................
EW730833       --> ..................................................
FY428340       --> ..................................................
FD565711       --> ..................................................
FY428358       --> ..................................................
EX907596       --> ..................................................
FD531959       --> ..................................................
EW728674       --> ..................................................

               1601   -   1651
UN16112        --> CCGCGAAGGAGTCGGCGATAAAGGCACCGAGGAGAGGGGTGAGACTCGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD963588       <-- ..................................................
FD536512       <-- ..................................................
EY897264       <-- ..................................................
EX765954       <-- ..................................................
EW725554       <-- ..................................................
EY941068       <-- ..................................................
EX903556       <-- ..................................................
FD561592       <-- CCGCGAAGGAGTCGGCGATAAAGGCACCGAGGAGAGGGGTGAGACTCGAA
EX755492       <-- CCGCGAAGGAGTCGGCGATAAAGGCACCGAGGAGAGGGGTGAGACTCGAA
FD536192       <-- CCGCGAAGGAGTCGGCGATAAAGGCACCGAGGAGAGGGGTGAGACTCGAA
EX899212       --> ..................................................
EX769660       --> ..................................................
EY893633       --> ..................................................
FD959855       --> ..................................................
EW730833       --> ..................................................
FY428340       --> ..................................................
FD565711       --> ..................................................
FY428358       --> ..................................................
EX907596       --> ..................................................
FD531959       --> ..................................................
EW728674       --> ..................................................

               1651   -   1701
UN16112        --> GTTCCACCGAAGTTAGTGAGAGTGTTGGCTGCTTTGGTTAAGGGAGGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD963588       <-- ..................................................
FD536512       <-- ..................................................
EY897264       <-- ..................................................
EX765954       <-- ..................................................
EW725554       <-- ..................................................
EY941068       <-- ..................................................
EX903556       <-- ..................................................
FD561592       <-- GTTCCACCGAAGTTAGTGAGAG............................
EX755492       <-- GTTCCACCGAAGTTAGTGAGAGTGTTGGCTGCTTTGGTTAAGGGAGGGTG
FD536192       <-- GTTCCACCGAAGTTAGTGAGAGTGTTGGCTGCTTTGGTTAAGGGAAGGTG
EX899212       --> ..................................................
EX769660       --> ..................................................
EY893633       --> ..................................................
FD959855       --> ..................................................
EW730833       --> ..................................................
FY428340       --> ..................................................
FD565711       --> ..................................................
FY428358       --> ..................................................
EX907596       --> ..................................................
FD531959       --> ..................................................
EW728674       --> ..................................................

               1701   -   1751
UN16112        --> AAGCTGTGTTGTTAGATAGCTTATCATGTTTGCGTGAAACCCAACCACCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD963588       <-- ..................................................
FD536512       <-- ..................................................
EY897264       <-- ..................................................
EX765954       <-- ..................................................
EW725554       <-- ..................................................
EY941068       <-- ..................................................
EX903556       <-- ..................................................
FD561592       <-- ..................................................
EX755492       <-- AAGCTGTGTTGTTAGATAGCTTAc..........................
FD536192       <-- AAGCTGTGTTGTTAGATAGCTTATCATGTTTGCGTGAAACCCAACCACCG
EX899212       --> ..................................................
EX769660       --> ..................................................
EY893633       --> ..................................................
FD959855       --> ..................................................
EW730833       --> ..................................................
FY428340       --> ..................................................
FD565711       --> ..................................................
FY428358       --> ..................................................
EX907596       --> ..................................................
FD531959       --> ..................................................
EW728674       --> ..................................................

               1751   -   1801
UN16112        --> CAACTTCTCACATATCTCGTTAGCAAAGATGAATGGCATAGTAATCAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD963588       <-- ..................................................
FD536512       <-- ..................................................
EY897264       <-- ..................................................
EX765954       <-- ..................................................
EW725554       <-- ..................................................
EY941068       <-- ..................................................
EX903556       <-- ..................................................
FD561592       <-- ..................................................
EX755492       <-- ..................................................
FD536192       <-- CAACTTCTCACATATCTCGTTAGCAAAGATGAATGGCATAGTAATCAACC
EX899212       --> ..................................................
EX769660       --> ..................................................
EY893633       --> ..................................................
FD959855       --> ..................................................
EW730833       --> ..................................................
FY428340       --> ..................................................
FD565711       --> ..................................................
FY428358       --> ..................................................
EX907596       --> ..................................................
FD531959       --> ..................................................
EW728674       --> ..................................................

               1801   -   1851
UN16112        --> CTCCCTTTGGTCGACTTCGTTTCCCATGAAGCTGTTTTTCTTCTTCACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD963588       <-- ..................................................
FD536512       <-- ..................................................
EY897264       <-- ..................................................
EX765954       <-- ..................................................
EW725554       <-- ..................................................
EY941068       <-- ..................................................
EX903556       <-- ..................................................
FD561592       <-- ..................................................
EX755492       <-- ..................................................
FD536192       <-- CTCCCTTTGGTCGACTTCGTTTCCCATGAAGCTGTTTTTCTTCTTCACTG
EX899212       --> ..................................................
EX769660       --> ..................................................
EY893633       --> ..................................................
FD959855       --> ..................................................
EW730833       --> ..................................................
FY428340       --> ..................................................
FD565711       --> ..................................................
FY428358       --> ..................................................
EX907596       --> ..................................................
FD531959       --> ..................................................
EW728674       --> ..................................................

               1851   -   1901
UN16112        --> ATCTTGTTCTTGCTCTGCTCCTCCATGATCTTGAGTGTTACTTGCAATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD963588       <-- ..................................................
FD536512       <-- ..................................................
EY897264       <-- ..................................................
EX765954       <-- ..................................................
EW725554       <-- ..................................................
EY941068       <-- ..................................................
EX903556       <-- ..................................................
FD561592       <-- ..................................................
EX755492       <-- ..................................................
FD536192       <-- ATCTTGTTCTTGCTCTGCTCCTCCATGATCTTGAGTGTTACTTGCAATAT
EX899212       --> ..................................................
EX769660       --> ..................................................
EY893633       --> ..................................................
FD959855       --> ..................................................
EW730833       --> ..................................................
FY428340       --> ..................................................
FD565711       --> ..................................................
FY428358       --> ..................................................
EX907596       --> ..................................................
FD531959       --> ..................................................
EW728674       --> ..................................................

               1901   -   1951
UN16112        --> TTAGTTAACTATGTTAATGTTTTTTTGTTTAGTGTTGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD963588       <-- ........................................
FD536512       <-- ........................................
EY897264       <-- ........................................
EX765954       <-- ........................................
EW725554       <-- ........................................
EY941068       <-- ........................................
EX903556       <-- ........................................
FD561592       <-- ........................................
EX755492       <-- ........................................
FD536192       <-- TTAGTTAACTATGTTAATGTTTTTTTGTTTAGTGTTGTCC
EX899212       --> ........................................
EX769660       --> ........................................
EY893633       --> ........................................
FD959855       --> ........................................
EW730833       --> ........................................
FY428340       --> ........................................
FD565711       --> ........................................
FY428358       --> ........................................
EX907596       --> ........................................
FD531959       --> ........................................
EW728674       --> ........................................