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Alignment for radish unigene UN16121

               1      -     51
UN16121        --> GGGTAAAAGGACTATCGTGCAATACGTAGTAAAGTAAAATTCTTAAATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD538915       <-- ..................................................
EX758487       <-- ..................................................
EW737941       <-- ..................................................
EV529488       <-- ..................................................
EY926352       <-- ..................................................
EY918254       <-- ..................................................
FD531702       <-- ..................................................
EY922258       --> GGGTAAAAGGACTATCGTGCAATACGTAGTAAAGTAAAATTCTTAAATTA
EY930059       --> ..................................................
EW733419       --> ..................................................
EV524507       --> ..................................................
EV569664       --> ..................................................
EX754083       --> ..................................................
EX895317       --> ..................................................
EY913747       --> ..................................................
EY932728       --> ..................................................
FD536186       --> ..................................................
FD542987       --> ..................................................
EX902970       --> ..................................................

               51     -    101
UN16121        --> ATTAAAAAAAAATAAATACAAAGGGAACCCCTAAATTGTTTCTTCTCCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD538915       <-- ..................................................
EX758487       <-- ..................................................
EW737941       <-- ..................................................
EV529488       <-- ..................................................
EY926352       <-- ..................................................
EY918254       <-- ..................................................
FD531702       <-- ..................................................
EY922258       --> ATTAAAAAAAAATAAATACAAAGGGAACCCCTAAATTGTTTCTTCTCCCC
EY930059       --> ......................GGGAACCCCTAAATTGTTTCTTCTCCCC
EW733419       --> ..............................ggAAATTGTTTCTTCTCCCC
EV524507       --> ..................................................
EV569664       --> ..................................................
EX754083       --> ..................................................
EX895317       --> ..................................................
EY913747       --> ..................................................
EY932728       --> ..................................................
FD536186       --> ..................................................
FD542987       --> ..................................................
EX902970       --> ..................................................

               101    -    151
UN16121        --> GCCGCCGCTGTGCCGAATCGACGTTGCG--TTGTACCGCCACAATCGGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD538915       <-- ..................................................
EX758487       <-- ..................................................
EW737941       <-- ..................................................
EV529488       <-- ..................................................
EY926352       <-- ..................................................
EY918254       <-- ..................................................
FD531702       <-- ..................................................
EY922258       --> GCCGCCGCTGTGCCGAATCGACGTTGCG--TTGTACCGCCACAATCGGTC
EY930059       --> GCCGCCGCTGTGCCGAATCGACGTTGCG--TTGTACCGCCACAATCGGTC
EW733419       --> GCCGCCGCTGTGCCGAATCGACGTTGCG--TTGTACCGCCGCAATCGGTC
EV524507       --> ..CGCCGCTGTGCCGAATCGACGCTGCG--TTGTACCGCCACAATCGGAC
EV569664       --> ..............GAATCGACGTTGCGACTTGTACCGCCACAATCGGTC
EX754083       --> ..............GAATCGACGTTGCGACTTGTACCGCCACAATCGGTC
EX895317       --> ............ggGAATCGACGTTGCG--TTGTACCGCCACAATCGGTC
EY913747       --> ..............GAATCGACGTTGCG--TTGTACCGCCACAATCGGTC
EY932728       --> ..............GAATCGACGTTGCG--TTGTACCGCCACAATCGGTC
FD536186       --> ..............GAATCGACGCTGCG--TTGTACCGCCACAATCGGAC
FD542987       --> ..............GAATCGACGTTGCT--TTGTACCTCCACAATCGGTC
EX902970       --> .......................ggGCG--TCGTACCGCCACAATCGGTC

               151    -    201
UN16121        --> GTAGATGGCTTACAGAGGAGGACGAGGAAGAGGAAGAGGTGGGTTTGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD538915       <-- ..................................................
EX758487       <-- ..................................................
EW737941       <-- ..................................................
EV529488       <-- ..................................................
EY926352       <-- ..................................................
EY918254       <-- ..................................................
FD531702       <-- ..................................................
EY922258       --> GTAGATGGCTTACAGAGGAGGACGAGGAAGAGGAAGAGGTGGGTTTGGTG
EY930059       --> GTAGATGGCTTACAGAGGAGGACGAGGAAGAGGAAGAGGTGGGTTTGGTG
EW733419       --> GTAGATGGCTTACAGAGGAGGACGAGGAAGAGGAAGAGGTGGGTTTGGTG
EV524507       --> GTAGATGGCTTACAGAGGAGGACGAGGAAGAGGAAGAGGTGGGTTTGGTG
EV569664       --> GTAGATGGCTTACAGAGGAGGACGAGGAAGAGGAAGAGGTGGGTTTGGTG
EX754083       --> GTAGATGGCTTACAGAGGAGGACGAGGAAGAGGAAGAGGTGGGTTTGGTG
EX895317       --> GTAGATGGCTTACAGAGGAGGACGAGGAAGAGGAAGAGGTGGGTTTGGTG
EY913747       --> GTAGATGGCTTACAGAGGAGGACGAGGAAGAGGAAGAGGTGGGTTTGGTG
EY932728       --> GTAGATGGCTTACAGAGGAGGACGAGGAAGAGGAAGAGGTGGGTTTGGTG
FD536186       --> GTAGATGGCTTACAGAGGAGGACGAGGAAGAGGAAGAGGTGGGTTTGGTG
FD542987       --> GTAGATGGCTTACAGAGGAGGACGAGGAAGAGGAAGAGGTGGGTTTGGTG
EX902970       --> GTAGATGGCTTACAGAGGAGGACGAGGAAGAGGAAGAGGTGGGTTTGGTG

               201    -    251
UN16121        --> GGTTTGGCGTTGAGTACGCAAAGGCCGAACCTTTCGTTATCTTCCCTGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD538915       <-- .................................................C  Raphanus raphanistrum subsp. raphanistrum (MS)
EX758487       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW737941       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV529488       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY926352       <-- ..................................................  Raphanus sativus var. oleiformis
EY918254       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD531702       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY922258       --> GGTTTGGCGTTGAGTACGCAAAGGCAGAACCTTTCGTTATCTTCCCTGAC  Raphanus raphanistrum subsp. landra
EY930059       --> GGTTTGGCGTTGAGTACGCAAAGGCCGAACCTTTCGTTATCCTCCCTGAC  Raphanus sativus var. oleiformis
EW733419       --> GGTTTGGCGTTGAGTACGCAAAGGCCGAACCTTTCGTTATCTTCCCTGAC  Raphanus sativus cv Rat-Tail Radish #3870
EV524507       --> GGTTTGGCGTTGAGTACGCAAAGGCCGAACCTTTTGTTATCTTCCCTGAC  Raphanus raphanistrum subsp. maritimus
EV569664       --> GGTTTGGCGTTGAGTACGCAAAGGCAGAACCTTTCTTTATCTTCCCTGAC  Raphanus raphanistrum subsp. landra
EX754083       --> GGTTTGGCGTTGAGTACGCAAAGGCAGAACCTTTTGTTATCTTCCCTGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX895317       --> GGTTTGGCGTTGAGTACGCAAAGGCCGAACCTTTCGTTATCTTCCCTGAC  Raphanus sativus cv Early Scarlet Globe
EY913747       --> GGTTTGGCGTTGAGTACGCAAAGGCCGAACCTTTCGTTATCTTCCCTGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY932728       --> GGTTTGGCGTTGAGTACGCAAAGGCCGAACCTTTCGTTATCTTCCCTGAC  Raphanus sativus var. oleiformis
FD536186       --> GGTTTGGCGTTGAGTACGCAAAGGCCGAACCTTTTGTTATCTTCCCTGAC  Raphanus raphanistrum subsp. maritimus
FD542987       --> GGTTTGGCGTTGAGTACGCAAAGGCAGAACCTTTTGTTATCTTCCCTGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX902970       --> GGTTTGGCGTTGAGTACGCAAAGGCCGAACCTTTCGTTATCTTCCCTGAC  Raphanus sativus cv Rat-Tail Radish #3870

               251    -    301
UN16121        --> ATTACGTTACCTGACCGTAAATCAATCTCAGACGATACCCAATTACTTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD538915       <-- ATTACGTTACCCGACCGTAAATCAATCTCAGACGATACCCAATTACTTAA
EX758487       <-- ...................AATCAATCTCAGACGATACCCAATTACTTAA
EW737941       <-- ............................CAGACGATACCCAATTACTTAA
EV529488       <-- ...............................ACGATACCCAATTACTTAA
EY926352       <-- ..................................................
EY918254       <-- ..................................................
FD531702       <-- ..................................................
EY922258       --> ATTACGTTACCTGACCGTAAATCAATCTCAGACGATACCCAATTACTTAA
EY930059       --> ATTACGTTACCTGACCGTAAATCAATCTCAGACGATACCCAATTACTTAA
EW733419       --> ATTACGTTACCTGACCGTAAATCAATCTCAGACGATACCCAATTACTTAA
EV524507       --> ATTACGTTACCTGATCGTAAATCAACCTCAGACGATACCCAATTACTTAA
EV569664       --> ATTACGTTACCTGACCGTAAATCAATCTCAGACGATACCCAATTACTTAA
EX754083       --> ATTACGTTACCTGGCCGTAAATCAATCTCAGACGATACCCAATTACTTAA
EX895317       --> ATTACGTTACCTGACCGTAAATCAATCTCAGACGATACCCAATTACTTAA
EY913747       --> ATTAC.............................................
EY932728       --> ATTACGTTACCTGACCGTAAATCAATCTCAGACGATACCCAATTACTTAA
FD536186       --> ATTACGTTACCTGATCGTAAATCAACCTCAGACGATACCCAATTACTTAA
FD542987       --> ATTACGTTACCCGACCGTAAATCAATCTCAGACGATACCCAATTACTTAA
EX902970       --> ATTACGTTACCTGACCGTAAATCAATCTCAGACGATACCCAATTACTTAA

               301    -    351
UN16121        --> GAACTTCAATTATTTTGAGAGGTTCTGGAAAAGTTCGCCTTACCACTTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD538915       <-- GAACTTTAATTATTTTGAGAGGTTCTGGAAAAATTCGCCTTACCACTTAG
EX758487       <-- GAACTTCAATTATTTTGAGAGGTTCTGGAAAAGTTCGCCTTACCACTTAG
EW737941       <-- GAACTTCAATTATTTTGAGAGGTTCTGGAAAAGTTCGCCTTACCACTTAG
EV529488       <-- GAACTTCAATTATTTTGAGAGGTTCTGGAAAAGTTCGCCTTACCACTTAG
EY926352       <-- ..................................................
EY918254       <-- ..................................................
FD531702       <-- ..................................................
EY922258       --> GAACTTCAATTATTTTGAGAGGTTCTGGAAAAGTTCGCCTTACCACTTAG
EY930059       --> GAACTTCAATTATTTTGAGAGGTTCTGGAAAAGTTCGCCTTACCACTTAG
EW733419       --> GAACTTCAATTATTTTGAGAGGTTCTGGAAAAGTTCGCCTTACCACTTAG
EV524507       --> GAACTTCAATTATTTTGAGAGGTTCTGGAAAAGTTCGCCTTACCACTTAG
EV569664       --> GAACTTCAATTATTTTGAGAGGTTCTGGAAAAGTTCGCCTTACCACTTAG
EX754083       --> GAACTTCAATTATTTTGAGAGGTTCTGGAAAAGTTCGCCTTACCACTTAG
EX895317       --> GAACTTCAATTATTTTGAGAGGTTCTGAAAAAGTTCGCCTTACCACTTAG
EY913747       --> ..................................................
EY932728       --> GAACTTCAATTATTTTGAGAGGTTCTGGAAAAGTTCGCCTTACCACTTAG
FD536186       --> GAACTTCAATTATTTTGAGAGGTTCTGGAAAAGTTCGCCTTACCACTTAG
FD542987       --> GAACTTTAATTATTTTGAGAGGTTCTGGAAAAATTCGCCTTACCACTTAG
EX902970       --> GAACTTCAATTATTTTGAGAGGTTCTGGAAAAGTTCGCCTTACCACTTAG

               351    -    401
UN16121        --> GCGATGGTGTTTCAAAGAAAGAGAGTGAGAGTTTAGACATTGAGAGGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD538915       <-- GCGATGGTGTTTCAAAGAAAGAGAGTGAGAGTTTAGACATTGAGAGGTTC
EX758487       <-- GCGATGGTGTTTCAAAGAAAGAGATTGAGAGTTTAGACATTGAGAGGTTC
EW737941       <-- GCGATGGTGTTTCAAAGAAAGAGAGTGAGAGTTTAGACATTGAGAGGTTT
EV529488       <-- GCGATGGTGTTTCAAAGAAAGAGAGTGAGAGTTTAGACATTGAGAGGTTT
EY926352       <-- .....GGTGTTTCAAAGAAAGAGAGTGAGAGTTTAGACATTGAGAGGTTC
EY918254       <-- ..................................................
FD531702       <-- ..................................................
EY922258       --> GCGATGGTGTTTCAAAGAAAGAGAGTGAGAGTTTAGACATTGAGAGGTTC
EY930059       --> GCGATGGTGTTTCAAAGAAAGAGAGTGAGAGTTTAGACATTGAGAGGTTC
EW733419       --> GCGATGGTGTTTCAAAGAAAGAGAGTGAGAGTTTAGACATTGAGAGGTTC
EV524507       --> GCGATGGTGTTTCAAAGAAAGAGAGTGAGAGTTTAGACATTGAGAGGTTC
EV569664       --> GCGATGGTGTTTCAAAGAAAGAGAGTGAGAGTTTAGACATTGAGAGGTTC
EX754083       --> GCGATGGTGTTTCAAAGAAAGAGATTGAGAGTTTAGACATTGAGAGGTTC
EX895317       --> GCGATGGTGTTTCAAAGAAAGAGAGTGAGAGTTTAGACATTGAGAGGTTC
EY913747       --> ..................................................
EY932728       --> GCGATGG-GTTTCAAAGAAAGAGAGTGAGAGTTTAGACATTGAAAGGTTC
FD536186       --> GCGATGGTGTTTCAAAGAAAGAGAGTGAGAGTTTAGACATTGAGAGGTTC
FD542987       --> GCGATGGTGTTTCAAAGAAAGAGAGTGAGAGTTTAGACATTGAGAGGTTC
EX902970       --> GCGATGGTGTTTCAAAGAAAGAGAGTGAGATTTTAGACATTGAGAGGTTC

               401    -    451
UN16121        --> TCAGACACGTTGAAGCCGAAGAAGACGAAGTCTAATGCGAGGGGATCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD538915       <-- TCAGACACGTTGAAGCCGAAGAAGACGAAGTCTAATGCGAGGGGATCTTT
EX758487       <-- TCAGAGACGTTGAAGCCGAAGAAGACGAAGTCTAATGCGAGGGGATCTTT
EW737941       <-- TCAGACACGTTGAAGCCGAAGAAGACGAAGTCTAATGCGAGGGGATCTTT
EV529488       <-- TCAGACACGTTGAAGCCGAAGAAGACGAAGTCTAATGCGAGGGGATCTTT
EY926352       <-- TCAGACACGTTGAAGCCGAAGAAGACGAAGTCTAATGCGAGGGGATCTTT
EY918254       <-- TCAGACACGTTAAAGCCGAAGAAGACCAAGTCTAGTGCGAGGGGATCTTT
FD531702       <-- ...................................TGCGAGGGGATCTTT
EY922258       --> TCAGACACGTTAAAGCCGAAGAAGACCAAGTCTAGTGCGAGGGGATCTTT
EY930059       --> TCAGACACGTTGAAGCCGAAGAAGACGAAGTCTAATGCGAGGGGATCTTT
EW733419       --> TCAGACACGTTGAAGCCGAAGAAGACGAAGTCTAATGCGAGGGGATCTTT
EV524507       --> TCAGACACGTTGAAGCCGAAGAAGACGAAGTCTAATGCGAGGGGATCTTT
EV569664       --> TCAGACACGTTAAAGCCGAAGAAGACGAAGTCTAATGCGAGGGGATCTTT
EX754083       --> TCAGAGACGTTGAAGCCGAAGAAGACGAAGTCTAATGCGAGGGGATCTTT
EX895317       --> TCAGACACGTTGAAGCCGAAGAAGACGAAGTCTAATGCGAGGGGATCTTT
EY913747       --> ..................................................
EY932728       --> TCAGACACGTTGAAGCCGAAGAAGACGAAGTCTAATGCGAGGGGATCTTT
FD536186       --> TCAGACACGTTGAAGCCGAAGAAGACGAAGTCTAATGCGAGGGGATCTTT
FD542987       --> TCAGACACGTTGAAGCCGAAGAAGACGAAGTCTAATGCGAGGGGATCTTT
EX902970       --> TCAGACACGTTGAAGCCGAAGAAGACGAAGTCTAATGCGAGGGGATCTTT

               451    -    501
UN16121        --> CTATGACTTTCTTGTTCTTAGACCTGATAACTTCCCTAAAGAACTTCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD538915       <-- CTATGACTTTCTTGTTCTTAGACCTGATAACTTCCCTAAAGAACTTCTTG
EX758487       <-- CTATGACTTCCTTGTTCTTAGACCTGATAACTTCCCTAAAGAACTTCTTG
EW737941       <-- TTATGACTTTCTTGTTCTTAGACCTGATAACTTCCCTAAAGAACTTCTTG
EV529488       <-- CTATGACTTTCTTGTTTTTAGACCTGATAACTTCCCTAAAGAACTTCTTG
EY926352       <-- CTATGACTTTCTTGTTCTTAGACCTGATAACTTCCCTAAAGAACTTCTTG
EY918254       <-- CTATGACTTTCTTGTTCTTAGACCTGATAACTTCCCTAAAGAACTTCTTG
FD531702       <-- CTATGACTTTCTTGTTCTTAGACCTGATAACTTCCCTAAAGAACTTCTTG
EY922258       --> CTATGACTTTCTTGTTCTTAGACCTGATAACTTCCCTAAAGAACTTCTTG
EY930059       --> CTATGACTTTCTTGTTCTTAGACCTGATAACTTCCCTAAAGAACTTCTTG
EW733419       --> CTATGACTTTCTTGTTCTTAGACCTGATAACTTCCCTAAAGAACTTCTTG
EV524507       --> CTATGACTTTCTTGTTCTTAGACCTGATAACTTCCCTAAAGAACTTCTTG
EV569664       --> CTATGACTTTCTTGTTCTTAGACCTGATAACTTCCCTAAAGAACTTCTCG
EX754083       --> CTATGACTTCCTTGTTCTTAGACCTGATAACTTCCCTAAAGAACTTCTTG
EX895317       --> CTATGACTTTCTTGTTCTTAGACCTGATAACTTCCCTAAAGAACTTCTTG
EY913747       --> ..................................................
EY932728       --> CTATGACTTTCTTGTTCTTAGACCTGATAACTTCCCTAAAGAACTTCTTG
FD536186       --> CTATGACTTTCTTGTTCTTAGACCTGATAACTTCCCTAAAGAACTTCTTG
FD542987       --> CTATGACTTTCTTGTTCTTAGACCTGATAACTTCCCTAAAGAACTTCTTG
EX902970       --> CTATGACTTTCTTGTTCTTAGACCTGATAACTTCCCTAAAGAACTTCTTG

               501    -    551
UN16121        --> GAGATAGTCGAAGAGAACGGCCTGTGAAGAGAGCTAGATGGACTCAAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD538915       <-- GAGATAGTCGAAGAGAACGGCCTGTGAAGAGAGCTAGATGGACTCAAGAC
EX758487       <-- GAGATAGTCGAAGAGAACGGCCTGTGAAGAGAGCTAGATGGACTCAAGAC
EW737941       <-- GAGGTAGTCGAAGAGAACGGCCTGTGAAGAGAGCTAGATGGACTCAAGAC
EV529488       <-- GAGATAGTCGAAGAGAACGGCCTGTGAAGAGAGCTAGATGGACTCAAGAC
EY926352       <-- GAGATAGTCGAAGAGAACGGCCTGTGAAGAGAGCTAGATGGACTCAAGAC
EY918254       <-- GAGATAGTCGAAGAGAACGGCCTGTGAAGAGAGCTAGATGGACTCAAGAC
FD531702       <-- GAGATAGTCGAAGAGAACGGCCTGTGAAGAGAGCTAGATGGACTCAAGAC
EY922258       --> GAGATAGTCGAAGAGAACGGCCTGTGAAGAGAGCTAGATGGACTCAAGAC
EY930059       --> GAGATAGTCGAAGAGAACGGCCTGTGAAGAGAGCTAGATGGACTCAAGAC
EW733419       --> GAGGTAGTCGAAGAGAACGGCCTGTGAAGAGAGCTAGATGGACTCAAGAC
EV524507       --> GAGATAGTCGAAGAGAACGGCCTGTGAAGAGAGCTAGATGGACTCAAGAC
EV569664       --> GAGATAGTCGAAGAGAACGGCCTGTGAAGAGAGCTAGATGGACTCAAGAC
EX754083       --> GAGATAGTCGAAGAGAACGGCCTGTGAAGAGAGCTAGATGGACTCAAGAC
EX895317       --> GAGATAGTCGAAGAGAACGGCCTGTGAAGAGAGCTAGATGGACTCAAGAC
EY913747       --> ..................................................
EY932728       --> GAGATAGTCGAAGAGAACGGCCTGTGAAGAGAGCTAGATGGACTCAAGAC
FD536186       --> GAGATAGTCGAAGAGAACGGCCTGTGAAGAGAGCTAGATGGACTCAAGAC
FD542987       --> GAGATAGTCGAAGAGAACGGCCTGTGAAGAGAGCTAGATGGACTCAAGAC
EX902970       --> GAGATAGTCGAAGAGAACGGCCTGTGAAGAGAGCTAGATGGACTCAAGAC

               551    -    601
UN16121        --> GCAGATCTGCAGAAGCTGGAGGCCTTGGAGAAACTTGAAGCGAAGCTTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD538915       <-- GCAGATCTGCAGAAGCTGGAGGCCTTGGAGAAACTTGAGGCGAAGCTTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX758487       <-- GCAGATCTGCAGAAGCTGGAGGCCTCGGAGAAACTTGAAGCGAAGCTTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW737941       <-- GCAGATCTGCAGAAGCTGGAGGCCTTGGAGAAACTTGAAGCGAAGCTTAA  Raphanus sativus cv Rat-Tail Radish #3870
EV529488       <-- GCAGGTCTGCAGAAGCTGGAGGCCTTGGAGAAACTTGAAGCGAAGCTTAA  Raphanus raphanistrum subsp. maritimus
EY926352       <-- GCAGATCTGCAGAAGCTGGAGGCCTTGGAGAAACTTGAAGCGAAGCTTAA  Raphanus sativus var. oleiformis
EY918254       <-- GCAGATCTGCAGAAGCTGGAGGTCTTGGAGAAACTTGAAGCGAAGCTTAA  Raphanus raphanistrum subsp. landra
FD531702       <-- GCAGGTCTGCAGAAGCTGGAGGCCTTGGAGAAACTTGAAGCGAAGCTTAA  Raphanus raphanistrum subsp. maritimus
EY922258       --> GCAGATCTGCAGAAGCTGGAGGTCTTGGAGAAACTTGAAGCGAAGC....  Raphanus raphanistrum subsp. landra
EY930059       --> GCAGATCTGCAGAAGCTGGAGGCCTTGGAGAAACTTGAAGCGAAGCTTAA  Raphanus sativus var. oleiformis
EW733419       --> GCAGATCTGCAGAAGCTGGAGGCCTTGGAGAAACTTGAAGCGAAGCTTAA  Raphanus sativus cv Rat-Tail Radish #3870
EV524507       --> GCAGGTCTGCAGAAGCTGGAGGCCTTGGAGAAACTTGAAGCGAAGCTTAA  Raphanus raphanistrum subsp. maritimus
EV569664       --> GCAGATTTGCAGAAGCTGGAGGTCTTGGAGAAACTTGAAGCGAAGCTTAA  Raphanus raphanistrum subsp. landra
EX754083       --> GCAGATCTGCAGAAGCTGGAGGCCTCGGAGAAACTTGAAGCGAAGCTTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX895317       --> GCAGATCTGCAGAAGCTGGAGGCCTTGGAGAAACTTGAAGCGAAGCTTAA  Raphanus sativus cv Early Scarlet Globe
EY913747       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY932728       --> GCAGATCTGCAGAAGCTGGAGGCCTTGGAGAAACTTGAAGCGAAGCTTAA  Raphanus sativus var. oleiformis
FD536186       --> GCAGGTCTGCAGAAGCTGGAGGCCTTGGAGAAACTTGAAGCGAAGCTTAA  Raphanus raphanistrum subsp. maritimus
FD542987       --> GCAGATCTGCAGAAGCTGGAGGCCTTGGAGAAACTTGAGGCGAAGCTTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX902970       --> GCAGATCTGCAGAAGCTGGAGGCCTTGGAGAAACTTGAAGCGAAGCTTAA  Raphanus sativus cv Rat-Tail Radish #3870

               601    -    651
UN16121        --> GGCTGATGGCAAGGAAGAGAATGAAGAAGGAGAAGGTGATGATGAAGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD538915       <-- GGCTGACGGCAAGGAAGAGAATGAAGAAGGAGAAGGTGATGATGAAGTTG
EX758487       <-- GGCTGATGGCAAGGAAGAGAATGAAGAAGGAGAAGGTGATGATGAAGTTG
EW737941       <-- GGCTGATGGCAAGGAAGAGAATGAAGAAGGAGAAGGTGATGATGAAGTTG
EV529488       <-- GGCTGATGGCAAGGAAGAGAATGAAGAAGGAGAAGGTGATGATGAAGTTG
EY926352       <-- GGCTGATGGCAAGGAAGAGAATGAAGAAGGAGAAGGTGATGATGAAGTTG
EY918254       <-- GGCTGATGGCAAGGAAGAGAATGAAGAAGGAGAAGGTGATGATGAAGTTG
FD531702       <-- GGCTGATGGCAAGGAAGAGAATGAAGAAGGAGAAGGTGATGATGAAGTTG
EY922258       --> ..................................................
EY930059       --> GGCTGATGGCAAGGAAGAGAATGAAGAAGGAGAAGGTGATGATGAAGTTG
EW733419       --> GGCTGATGGCAAGGAAGAGAATGAAGAAGGAGAAGGTGATGATGAAGTTG
EV524507       --> GGCTGATGGCAAGGAAGAGAATGAAGAAGGAGAAGGTGATGATGAAGTTG
EV569664       --> GGCTGATGGCAAGGA-GAGAATGAAGAAGGAGAAGGTGATGATGAAGTTG
EX754083       --> GGCTGATGGCAAGGAAGAGAATGAAGAAGGAGAAGGTGATGATGAAGTTG
EX895317       --> GGCTGATGGCAAGGAAGAGAATGAAGAAGGAGAAGGTGATGATGAAGTTG
EY913747       --> ..................................................
EY932728       --> GGCTGATGGCAAGGAAGAGAATGAAGAAGGAGAAGGTGATGATGAAGTTG
FD536186       --> GGCTGATGGCAAGGAAGAGAATGAAGAAGGAGAAGGTGATGATGAAGTTG
FD542987       --> GGCTGACGGCAAGGAAGAGAATGAAGAAGGAGAAGGTGATGATGAAGTTG
EX902970       --> GGCTGATGGCAAGGAAGAGAATGAAGAAGGAGAAGGTGATGATGAAGTTG

               651    -    701
UN16121        --> AGGAATCCGAGGGAGAAGATTCTGATAACGGAGACTATGATAAGAATAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD538915       <-- AGGAATCTGAGGGAGAAGATTCTGATAACGGAGACTATGATAAGAATAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX758487       <-- AGGAATCTGAGGGAGAAGATTCTGATAACGGAGACTATGATAAGAATAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW737941       <-- AGGAATCCGAGGGAGAAGATTCTGATAACGGAGACTATGATAAGAATAAA  Raphanus sativus cv Rat-Tail Radish #3870
EV529488       <-- AGGAATCCGAGGGAGAAGATTCTGATAACGGAGACTATGATAAGAATAAA  Raphanus raphanistrum subsp. maritimus
EY926352       <-- AGGAATCCGAGGGAGAAGATTCTGATAACGGAGACTATGATAAGAATAAA  Raphanus sativus var. oleiformis
EY918254       <-- AGGAATCTGAGGGAGAAGATTCTGATAACGGAGACTATGATAAGAATAAA  Raphanus raphanistrum subsp. landra
FD531702       <-- AGGAATCCGAGGGAGAAGATTCTGATAACGGAGACTATGATAAGAATAAA  Raphanus raphanistrum subsp. maritimus
EY922258       --> ..................................................  Raphanus raphanistrum subsp. landra
EY930059       --> AGGAATCCGAGGGAGAAGATTCTGATAACGGAGACTATGATAAGAATAAA  Raphanus sativus var. oleiformis
EW733419       --> AGGAATCCGAGGGAGAAGATTCTGATAACGGAGACTATGATAAGAATAAA  Raphanus sativus cv Rat-Tail Radish #3870
EV524507       --> AGGAATCCGAGGGAGAAGATTCTGATAACGGAGACTATGATAAGAATAAA  Raphanus raphanistrum subsp. maritimus
EV569664       --> AGGAATCTGAGGGAGAAGATTCTGATAACGGAGACTATGATAAGAATAAA  Raphanus raphanistrum subsp. landra
EX754083       --> AGGAATCTGAGGGAGAAGATTCTGATAACGGAGACTATGATAAGAATAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX895317       --> AGGAATCCGAGGGAGAAGATTCTGATAACGGAGACTATGATAAGAATAAA  Raphanus sativus cv Early Scarlet Globe
EY913747       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY932728       --> AGGAATCCGAGGGAGAAGATTCTGATAACGGAGACTATGATAAGAATAAA  Raphanus sativus var. oleiformis
FD536186       --> AGGAATCCGAGGGAGAAGATTCTGATAACGGAGACTATGATAAGAATAAA  Raphanus raphanistrum subsp. maritimus
FD542987       --> AGGAATCTGAGGGAGAAGATTCTGATAACGGAGACTATGATAAGAATAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX902970       --> AGGAATCCGAGGGAGAAGATTCTGATAACGGAGACTATGATAAGAATAAA  Raphanus sativus cv Rat-Tail Radish #3870

               701    -    751
UN16121        --> GACTTTGACGATGATGATGACGATTATAACGAGCCGGAGGATAACGATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD538915       <-- GACTTTGACGATGATGATGACGATTATAACGAGCCGGAGGATAACGATAA
EX758487       <-- GACTTTGACGATGATGATGACGATTATAACGAGCCGGAGGATAACGATAA
EW737941       <-- GACTTTGACGATGATGATGACGATTATAACGAGCCGGAGGATAACGATAA
EV529488       <-- GACTTTGACGATGATGATGACGATTATAACGAGCCGGAGGATAACGATAA
EY926352       <-- GACTTTGACTATGATGATGACGATTATAACGAGCCGGAGGATAACGATAA
EY918254       <-- GACTTTGACGATGATGATGACGATTACAACGAGCCGGAGGATAACGATAA
FD531702       <-- GACTTTGACGATGATGATGACGATTATAACGAGCCGGAGGATAACGATAA
EY922258       --> ..................................................
EY930059       --> GACTTTGACTATGATGATGACGATTATAACGAG.................
EW733419       --> GACTTTGACGATGATGATGACGATTATAACGAGCCGGAGGATAACGATAA
EV524507       --> GACTTTGACGATGATGATGACGATTATAACGAGCCGGAGGATAACGATAA
EV569664       --> GACTTTGACGATGATGATGACGATTATAACGAGCCGGAGGATAACGATAA
EX754083       --> GACTTTGACGATGATGATGACGATTATAACGAGCCGGAG-ATAACGATAA
EX895317       --> GACTTTGACGATGATGATGACGATTATAACGAGCCGGAGGATAACGATAA
EY913747       --> ..................................................
EY932728       --> GACTTTGACGATGATGATGACGATTATAACGAGCCGGAG-ATAACGATAA
FD536186       --> GACTTTGACGATGATGATGACGATTATAACGAGCCGGAG-ATAACGATAA
FD542987       --> GACTTTGACGATGATGATGACGATTATAACGAGCCGGAG-ATAACGATAA
EX902970       --> GACTTTGACGATGATGATGACGATTATAACGAGCCGGAGGATAACGATAA

               751    -    801
UN16121        --> TGAAGAAGTGTATATTTAAGGCTTCTTTTTCTTTATGTCTTCCCAAAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD538915       <-- TGAAGAAGTGTATATGTAAGGCTTCTTTTTCTTTATGTCTTCCCAAAAAA
EX758487       <-- TGAAGAAGTGTATATGTAAGGCTTCTTTTTCTTTATGTCTTCCCAAAAAA
EW737941       <-- TGAAGAAGTGTATATTTAAGGCTTCTTTTTCTTTATGTCTTCCCAAAA--
EV529488       <-- TGAAGAAGTGTATATTTAAGGCTTCTTTTT-TTTATGTCTTCCCAAAAAA
EY926352       <-- TGAAGAAGTGTATATTTAAGGCTTCTTTTTCTTTATGTCTTCCCAAAAAA
EY918254       <-- TGAAGAAGTGTATATTTAAGGCTTCTTTTTCTTTATGTCTTCCCAAAAAA
FD531702       <-- TGAAGAAGTGTATATTTAAGGCTTCTTTTT-TTTATGTCTTCCCAAAAAA
EY922258       --> ..................................................
EY930059       --> ..................................................
EW733419       --> TGAAGAAGTGTATATTTAAAGCTTCTTTTTCTTTATGTCTTCCCAAAAA-
EV524507       --> TGAAGAAGTGTATATTTAAGGCTTCTTTTT-TTTATGTCTTCCCA.....
EV569664       --> TGAAGAAGTGTATATTTAAGGCTTCTTTTTCTTTATGTCTTCCCAAAAAA
EX754083       --> TGAAGAAGTGTATATGTAAG-CTTCTTTTTCTTTATGTCTTCCCA.....
EX895317       --> TGAAGAAGTGTATATTT.................................
EY913747       --> ..................................................
EY932728       --> TGAAGAAGTGTATATTTAAAGCTTCTTTTTCTTTATGTCTTCCCAAAAAA
FD536186       --> TGAAGAAGTGTATATTT.................................
FD542987       --> TGAAGAAGTGTATATg..................................
EX902970       --> TGAAGAAGTGTATATTT.................................

               801    -    851
UN16121        --> AGGATCAAGTTTTGAGTGCAAGAGATGGTGGAAACTCAATTTTAATTACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD538915       <-- AGGATCAAGTTTTGAGTGCAAGAGATGGTAGAAACTCAATTTTAATTACC
EX758487       <-- AGGATCAAGTTTTGAGTGCAAGAGATGGTGGAAACTCAATTTTAATTACC
EW737941       <-- AGGATCAAGTTTTGAGTGCAAGAGATGGTGGAAACTCAATTTTAATTACC
EV529488       <-- AGGATCAAGTTTTGAGTGCAAGAGATGGTGGAAACTCAATTTTAATTACC
EY926352       <-- AGGATCAAGTTTTGAGTGCAAGAGATGGTGGAAACTCAATTTTAATTACC
EY918254       <-- AGGATCAAGTTTTGAGTGCAAGAGATGGTGGAAACTCAATTTTAATTACC
FD531702       <-- AGGATCAAGTTTTGAGTGCAAGAGATGGTGGAAACTCAATTTTAATTACC
EY922258       --> ..................................................
EY930059       --> ..................................................
EW733419       --> -GGATCAAGTTTTGAGTGCAAGAGATGGTGGAAACTCAATTTTAATTACC
EV524507       --> ..................................................
EV569664       --> -GGATCAAGTTTTGAGTGCAAGAGATGGTGGAAACTCAATTTTAATTACC
EX754083       --> ..................................................
EX895317       --> ..................................................
EY913747       --> ..................................................
EY932728       --> -GGATCAAGTTTTGAGTGCAAGAGATGGTGGAAACTCA............
FD536186       --> ..................................................
FD542987       --> ..................................................
EX902970       --> ..................................................

               851    -    901
UN16121        --> TTCAAACCCTCTTAGAATAATACAAGCGCAATTTTTGGCATTTGTTGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD538915       <-- TTCAAACCCTCTTAGAATAATACAAGCGCAATTTTggc............
EX758487       <-- TTCAAACCCTCTTAGAATAATACAAGCGCAATTTT-GGCATTTGTTGCTT
EW737941       <-- TTCAAACCCTCTTAGAATAATACAAGGGCA-TTTCTGGC...........
EV529488       <-- TTCAAACCCTCT-AGAATAATACAAGCGCAATTTTTGGCATTTGTTGCTT
EY926352       <-- TTCAAACCCTCTTAGAATAATACAAGGGCA-TTTCTGGCATTTGTTGCTT
EY918254       <-- TTCAAACCCTCTTAGAATAATACAAGCGCAATTTTTGGCATTTGTTGCTT
FD531702       <-- TTCAAACCCTCT-AGAATAATACAAGCGCAATTTTTGGCATTTGTTGCTT
EY922258       --> ..................................................
EY930059       --> ..................................................
EW733419       --> TTCAAACCCTCTTAGA-T-ATACAAGGGCAtttctgg.............
EV524507       --> ..................................................
EV569664       --> TTCAAACCCTCTTAGAATAATgca..........................
EX754083       --> ..................................................
EX895317       --> ..................................................
EY913747       --> ..................................................
EY932728       --> ..................................................
FD536186       --> ..................................................
FD542987       --> ..................................................
EX902970       --> ..................................................

               901    -    951
UN16121        --> TCATTCTTTTTTTTTTTTT-GCTTTAATCTATTGGGAATTAGCTGTAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD538915       <-- ..................................................
EX758487       <-- TCATTCTTTTTTTTTTTTTTGCTTTAATCTATGGGGAATTAGCTGTAATA
EW737941       <-- ..................................................
EV529488       <-- TCATTCTTTTTTTTTTTT--GCTTTAATCTATTGGGAATTAGCTGTAATA
EY926352       <-- TTATTCTTTTTTTTTTgg................................
EY918254       <-- TCATTCTTTT-----TTTT-GCTTTAATCTATGGGGAATTAGCTGTAATA
FD531702       <-- TCATT-TTTTTTTTTTTTT-GCTTTAATCTATTGGGAATTAGCTGTAATA
EY922258       --> ..................................................
EY930059       --> ..................................................
EW733419       --> ..................................................
EV524507       --> ..................................................
EV569664       --> ..................................................
EX754083       --> ..................................................
EX895317       --> ..................................................
EY913747       --> ..................................................
EY932728       --> ..................................................
FD536186       --> ..................................................
FD542987       --> ..................................................
EX902970       --> ..................................................

               951    -   1001
UN16121        --> CACATAAAAAGGTCAAAAATAAAGTTTCTAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD538915       <-- .................................
EX758487       <-- CACATAAAAA.......................
EW737941       <-- .................................
EV529488       <-- CACATAAAAAGGTCAAAAATAAAGTTTCTAACC
EY926352       <-- .................................
EY918254       <-- CACATTAAAAAGTCAAAAATAAAGTTTCTAACC
FD531702       <-- CACATAAAAAGGTCAAAAATAAAGTTTCTAACC
EY922258       --> .................................
EY930059       --> .................................
EW733419       --> .................................
EV524507       --> .................................
EV569664       --> .................................
EX754083       --> .................................
EX895317       --> .................................
EY913747       --> .................................
EY932728       --> .................................
FD536186       --> .................................
FD542987       --> .................................
EX902970       --> .................................