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Alignment for radish unigene UN16198

               -4     -     46
UN16198        --> .....ACAAGCTCTCAAGTTGTTTGTTTGAA-TAACAAAGCAGAAGGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542659       <-- ..................................................
EY928559       <-- ..................................................
EX747478       --> ggatcACAAGCTCTCAAGTTGTTTGTTTGAA-TAACAAAGCAGAAGGCAA
EX755840       --> ...ggACAAGCTCTCAAGTTGTTTGTTTGAAATAACAAAGCAGAAGGCAA
FD564575       --> ..................tttTTTGTTTGAA-TAACAAAGCAGAAGGCAA
EV538712       --> ..................................................
FD980504       --> ..................................................
EV566763       --> ..................................................
EV567011       --> ..................................................
FD580610       --> ..................................................
FD972391       --> ..................................................

               46     -     96
UN16198        --> TAATTACTAATAAAGCAAATAACTAATAAGTGAAGAATGGCTGGAGGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542659       <-- ..................................................
EY928559       <-- ..................................................
EX747478       --> TAATTACTAATAAAGCAAATAACTAATAAGTGAAGAATGGCTGGAGGAGC
EX755840       --> TAATTACTAATAAAGCAAATAACTAATAAGTGAAGAATGGCTGGAGGAGC
FD564575       --> TAATTACTAATAAAGCAAATAACTAATAAGTGAAGAATGGCTGGAGGAGC
EV538712       --> ..................................................
FD980504       --> ..................................................
EV566763       --> ..................................................
EV567011       --> ..................................................
FD580610       --> ..................................................
FD972391       --> ..................................................

               96     -    146
UN16198        --> CTTTGTATCAGATGGTGGTGGTGGAGGAAGCTATGAAGGCGGAGTCACCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542659       <-- ..................................................
EY928559       <-- ..................................................
EX747478       --> CTTTGTATCAGATGGTGGTGGTGGAGGAAGCTATGAAGGCGGAGTCACTG
EX755840       --> CTTTGTATCAGATGGTGGTGGTGGAGGAAGCTATGAAGGCGGAGTCACCG
FD564575       --> CTTTGTATCAGATGGTGGTGGTGGAGGAAGCTATGAAGGCGGAGTCACCG
EV538712       --> ..................................................
FD980504       --> ..................................................
EV566763       --> ..................................................
EV567011       --> ..................................................
FD580610       --> ..................................................
FD972391       --> ..................................................

               146    -    196
UN16198        --> GCTTTGTCATCATCACATGTATTGTGGCCGCTATGGGAGGTCTCCTCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542659       <-- ..................................................
EY928559       <-- ..................................................
EX747478       --> GCTTTGTCATCATCACATGTATTGTGGCCGCTATGGGAGGTCTCCTCTTC
EX755840       --> GCTTTGTCATCATCACATGTATTGTGGCCGCTATGGGATGTCTCCTCTTC
FD564575       --> GCTTTGTCATCATCACATGTATTGTGGCCGCTATGGGAGGTCTCCTCTTC
EV538712       --> ..................................................
FD980504       --> ..................................................
EV566763       --> ..................................................
EV567011       --> ..................................................
FD580610       --> ..................................................
FD972391       --> ..................................................

               196    -    246
UN16198        --> GGTTACGACCTCGGAATCTCAGGAGGAGTGACATCAATGGAGGAGTTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542659       <-- ..................................................
EY928559       <-- ..................................................
EX747478       --> GGTTACGACCTCGGAATCTCAGGAGGAGTGACATCAATGGAGGAGTTTCT
EX755840       --> GGTTACGACCTCGGAATCTCAGGAGGAGTTACATCAATGGAGGAGTTTCT
FD564575       --> GGTTACGACCTCGGAATCTCAGGAGGAGTGACATCAATGGAGGAGTTTCT
EV538712       --> ..................................................
FD980504       --> ..................................................
EV566763       --> ..................................................
EV567011       --> ..................................................
FD580610       --> ..................................................
FD972391       --> ..................................................

               246    -    296
UN16198        --> GAGCAAGTTTTTCCCTGAAGTGGATAGGCAAATGCACAACGCTAAGGGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542659       <-- ..................................................
EY928559       <-- ..................................................
EX747478       --> GAGCAAGTTTTTCCCTGAAGTGGATAGGCAAATGCACAACGCTAAGGGCG
EX755840       --> GAGCAAGTTTTTCCCTGAAGTGGATAGGCAAATGCACAACGCTAAGGGCG
FD564575       --> GAGCAAGTTTTTCCCTGAAGTGGATAGGCAAATGCACAACGCTAAGGGCG
EV538712       --> ..................................................
FD980504       --> ..................................................
EV566763       --> ..................................................
EV567011       --> ..................................................
FD580610       --> ..................................................
FD972391       --> ..................................................

               296    -    346
UN16198        --> AGACTGCTTACTGCAAATTCGATAACCAACTGCTCCAATTGTTTACTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542659       <-- ..................................................
EY928559       <-- ..................................................
EX747478       --> AGACTGCCTACTGCAAATTCGATAACCAACTGCTCCAATTGTTTACTTCC
EX755840       --> AGACTGCTTACTGCAAATTCGATAACCAACTGCTCCAATTGTTTACTTCA
FD564575       --> AGACTGCTTACTGCAAATTCGATAACCAACTGCTCCAATTGTTTACTTCC
EV538712       --> ..................................................
FD980504       --> ..................................................
EV566763       --> ..................................................
EV567011       --> ..................................................
FD580610       --> ..................................................
FD972391       --> ..................................................

               346    -    396
UN16198        --> TCACTTTATCTCGCGGCCCTTGTGTCTTCCTTTGCAGCTTCAGTTGTGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542659       <-- ..................................................
EY928559       <-- ..................................................
EX747478       --> TCACTTTATCTCGCGGCCCTTGTGTCTTCCTTTGCAGCTTCAGTTGTGAC
EX755840       --> TCACTTTATCTCGCGGCCCTTGTGTCTTCCTTTGCAGCTTCAGTTGTGAC
FD564575       --> TCACTTTATCTCGCGGCCCTTGTGTCTTCCTTTGCAGCTTCAGTTGTGAC
EV538712       --> ..................................................
FD980504       --> ..................................................
EV566763       --> ..................................................
EV567011       --> ..................................................
FD580610       --> ..................................................
FD972391       --> ..................................................

               396    -    446
UN16198        --> AAGGAAGTACGGTCGCAAAGTCTCCATGTTTATTGGAGGTCTTGCTTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542659       <-- ..................................................
EY928559       <-- ..................................................
EX747478       --> AAGGAAGTACGGTCGCAAAGTCTCTATGTTTATTGGAGGTCTTGCTTTCC
EX755840       --> AAGGAAGTACGGTCGCAAAGTCTCCATGTTTATTGGAGGTCTTGCTTTCC
FD564575       --> AAGGAAGTACGGTCGCAAAGTCTCCATGTTTATTGGAGGTCTTGCTTTCC
EV538712       --> ..................................................
FD980504       --> ..................................................
EV566763       --> ..................................................
EV567011       --> ..................................................
FD580610       --> ..................................................
FD972391       --> ..................................................

               446    -    496
UN16198        --> TCATTGGTGCTCTATTCAACGCATTTGCAGGGAACGTTGCGATGCTCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542659       <-- ..................................................
EY928559       <-- ..................................................
EX747478       --> TCATTGGTGCTCTATTCAACGCATTTGCAGGGAACGTTGCGATGCTCATC
EX755840       --> TCATTGGTGCCCTATTCAACGCATTTGCAGGGAACGTTGCGATGCTCATC
FD564575       --> TCATTGGTGCTCTATTCAACGCATTTGCAGGGAACGTTGCGATGCTCATC
EV538712       --> ..................................................
FD980504       --> ..................................................
EV566763       --> ..................................................
EV567011       --> ..................................................
FD580610       --> ..................................................
FD972391       --> ..................................................

               496    -    546
UN16198        --> ATCGGTAGATTGTTGCTTGGAGTCGGTGTTGGGTTCGCTAATCAGTCTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542659       <-- ..................................................
EY928559       <-- ..................................................
EX747478       --> ATCGGTAGATTGTTGCTTGGAGTCGGTGTTGGGTTCGCTAATCAGTCTAC
EX755840       --> ATCGGTAGATTGTTGCTTGGAGTCGGTGTTGGGTTCGCTAATCAGTCTAC
FD564575       --> ATCGGTAGATTGTTGCTTGGAGTCGGTGTTGGGTTCGCTAATCAGTCTAC
EV538712       --> ..................................................
FD980504       --> ..................................................
EV566763       --> ..................................................
EV567011       --> ..................................................
FD580610       --> ..................................................
FD972391       --> ..................................................

               546    -    596
UN16198        --> TCCGGTTTACCTCTCAGAGATGGCTCCTGCCAAGATCAGAGGAGCACTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542659       <-- ..................................................
EY928559       <-- ..................................................
EX747478       --> TCCGGTTTACCTCTCAGAGATGGCTCCTGCCAAGATCAGAGGAGCACTCA
EX755840       --> TCCGGTTTACCTCTCAGAGATGGCTCCTGCCAAGATCAGAGGAGCACTCA
FD564575       --> TCCGGTTTATCTCTCAGAGATGGCTCCTGCCAAGATCAGAGGAGCACTCA
EV538712       --> ..............................gAAGATCAGAGGAGCACTCA
FD980504       --> ..................................................
EV566763       --> ..................................................
EV567011       --> ..................................................
FD580610       --> ..................................................
FD972391       --> ..................................................

               596    -    646
UN16198        --> ACATCGGATTCCAAATGGCTATAACTATCGGGATTCTGATTGCAAACCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542659       <-- ..................................................
EY928559       <-- ..................................................
EX747478       --> ACATCGGATTCCAAATGGCTATAACTATCGGGATTCTGATTGCAAACCTG
EX755840       --> ACATCGGATTCCAAATGGCTATAACTATCGGGATTCTGATTGCAAACCTG
FD564575       --> ACATCGGATTCCAAATGGCTATAACCATCGGGATTCTGATTGCAAACCTG
EV538712       --> ACATCGGATTCCAAATGGCTATAACTATCGGGATTCTGATTGCAAACCTG
FD980504       --> ..................................................
EV566763       --> ..................................................
EV567011       --> ..................................................
FD580610       --> ..................................................
FD972391       --> ..................................................

               646    -    696
UN16198        --> ATTAACTATGGAACATCTCAAATGGCAAAGAACGGATGGAGAGTGTCATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542659       <-- ..................................................
EY928559       <-- ..................................................
EX747478       --> ATTAACTATGGAACATCTCAAATGGCAAAGAACGGATGGAGAGTGTCATT
EX755840       --> ATTAACTATGGAACATCTCAAATGGCAAAGA-CGGATGGAGAGTGTCATT
FD564575       --> ATTAACTATGGAACATCTCAAATGGCAAAGAACGGATGGAGAGTGTCATT
EV538712       --> ATTAACTATGGAACATCTCAAACGGCAAAGAACGGATGGAGAGTGTCTTT
FD980504       --> .......gTGGAACATCTCAAATGGCAAAGAACGGATGGAGAGTGTCATT
EV566763       --> ..................................GATGGAGAGTGTCATT
EV567011       --> ..................................GATGGAGAGTGTCATT
FD580610       --> ..................................................
FD972391       --> ..................................................

               696    -    746
UN16198        --> AGGTCTAGCTGCTGTTCCAGCAGTTGTGATGGTCATAGGATCTTTTGTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542659       <-- ..................................................
EY928559       <-- ..................................................
EX747478       --> Acgt..............................................
EX755840       --> AG-TCTAGCTGCTGTTCCAGCAGTTGTa......................
FD564575       --> Atgt..............................................
EV538712       --> AGGTCTAGCTGCTGTTCCAGCAGTTGTAATGGTCATAGGATCTTTTGTCT
FD980504       --> AGGTCTAGCTGCTGTTCCAGCAGTTGTGATGGTCATAGGATCTTTTGTCT
EV566763       --> AGGTCTAGCTGCTGTTCCAGCAGTTGTGATGGTCATAGGATCTTTTGTCT
EV567011       --> AGGTCTAGCTGCTGTTCCAGCAGTTGTGATGGTCATAGGATCTTTTGTCT
FD580610       --> .GGTCTAGCTGCTGTTCCAGCAGTTGTAATGGTCATAGGATCTTTTGTCT
FD972391       --> ..................................................

               746    -    796
UN16198        --> TGCCAGACACGCCAAACTCAATGCTCGAGAGAGGCAAGTATGAACAAGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542659       <-- ..................................................
EY928559       <-- ..................................................
EX747478       --> ..................................................
EX755840       --> ..................................................
FD564575       --> ..................................................
EV538712       --> TGCCAGACACGCCAAACTCAATGCTCGAGAGAGGTAAGTATGAACAAGCG
FD980504       --> TGCCAGACACGCCAAACTCAATGCTCGAGAGAGGCAAGTATGAACAAGCG
EV566763       --> TGCCAGACACGCCAAACTCAATGCTCGAGAGAGGCAAGTATGAACAAGCG
EV567011       --> TGCCAGACACGCCAAACTCAATGCTCGAGAGAGGCAAGTATGAACAAGCG
FD580610       --> TGCCAGACACGCCAAACTCAATGCTCGAGAGAGGCAAGTATGAACAAGCG
FD972391       --> ..................................................

               796    -    846
UN16198        --> AGAGCGATGTTACAAAAGATCCGTGGAGCTGATAACGTCGACGAGGAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542659       <-- ..................................................
EY928559       <-- ..................................................
EX747478       --> ..................................................
EX755840       --> ..................................................
FD564575       --> ..................................................
EV538712       --> AGAGCGATGTTACAAAAGATCCGTGGAGCTGACAACGTCGACGAGGAGTT
FD980504       --> AGAGCGATGTTACAAAAGATCCGTGGAGCTGATAACGTCGACGAGGAGTT
EV566763       --> AGAGCGATGTTACAAAAGATCCGTGGAGCTGATAACGTCGACGAGGAGTT
EV567011       --> AGAGCGATGTTACAAAAGATCCGTGGAGCTGATAACGTCGACGAGGAGTT
FD580610       --> AGAGCGATGTTACAAAAGATCCGTGGAGCTGATAACGTGGACGAGGAGTT
FD972391       --> ..................................................

               846    -    896
UN16198        --> TCAAGATCTTTGTGATGCTTGTGAGGCTGCTAAAAAAGTGGAACACCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542659       <-- ..................................................
EY928559       <-- ..................................................
EX747478       --> ..................................................
EX755840       --> ..................................................
FD564575       --> ..................................................
EV538712       --> TCAAGATCTTTGTGATGCTTGTGAGGCTGCTAAAAAAGTGGAACACCCTT
FD980504       --> TCAAGATCTTTGTGATGCTTGTGAGGCTGCTAAAAAAGTGGAACACCCTT
EV566763       --> TCAAGATCTTTGTGATGCTTGTGAGGCTGCTAAAAAAGTGGAACACCCTT
EV567011       --> TCAAGATCTTTGTGATGCTTGTGAGGCTGCTAAAAAAGTGGAACACCCTT
FD580610       --> TCAAGATCTTTGTGATGCTTGTGAGGCTGCTAAAAAAGTGGAACACCCTT
FD972391       --> ..................................................

               896    -    946
UN16198        --> GGAAGAACCTTTTCCTACAAGCTAAATACAGACCTGCTCTTGCTTTCTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542659       <-- ..................................................
EY928559       <-- ..................................................
EX747478       --> ..................................................
EX755840       --> ..................................................
FD564575       --> ..................................................
EV538712       --> GGAAGAACCTTTTCCTACAAGCTAAATACCGACCTGCTCTTGCTTTCTGT
FD980504       --> GGAAGAACCTTTTCCTACAAGCTAAATACAGACCTGCTCTTGCTTTCTGT
EV566763       --> GGAAGAACCTTTTCCTACAAGCTAAATACAGACCTGCTCTTGCTTTCTGT
EV567011       --> GGAAGAACCTTTTCCTACAAGCTAAATACAGACCTGCTCTTGCTTTCTGT
FD580610       --> GGAAGAACCTTTTCCTACAAGCTAAATACAGACCTGCTCTTGCTTTCTGT
FD972391       --> ..................................................

               946    -    996
UN16198        --> TCTGCCATACCTTTCTTCCAGCAGTTCACCGGTATCAATGTGATCATGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542659       <-- ...............tcCCAGCAGTTCACCGGTATCAATGTGATCATGTT
EY928559       <-- ..................................................
EX747478       --> ..................................................
EX755840       --> ..................................................
FD564575       --> ..................................................
EV538712       --> TCTGCGATACCTTTCTTCCAGCAGTTCACCGGTATCAATGTGATCATGTT
FD980504       --> TCTGCCATACCTTTCTTCCAGCAGTTCACCGGTATCAATGTGATCATGTT
EV566763       --> TCTGCCATACCTTTCTTCCAGCAGTTCACTGGTATCAATGTGATCATGTT
EV567011       --> TCTGCCATACCTTTCTTCCAGCAGTTCACTGGTATCAATGTGATCATGTT
FD580610       --> TCTGCCATACCTTTCTTCCAACAGTTCACCGGTATCAATGTGATCATGTT
FD972391       --> .......gACCTTTCTTCCAGCAGTTCACCGGTATCAATGTGATCATGTT

               996    -   1046
UN16198        --> -CTACGCTCCTGTTCTCTTTAAAACTCTCGGTTTCGCTGATGATGCCTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542659       <-- TCTACGCTCCTGTTCTCTTTAGAACTCTCGGTTTCGCTGATGATGCCTCG
EY928559       <-- ..................................................
EX747478       --> ..................................................
EX755840       --> ..................................................
FD564575       --> ..................................................
EV538712       --> -CTACGCTCCTGTTCTCTTTAGAACTCTCGGTTTCGCTGATGATGCCTCG
FD980504       --> -CTACGCTCCTGTTCTCTTTAAAACTCTCGGTTTTGCTGATGATGCCTCG
EV566763       --> -CTACGCTCCTGTTCTCTTTAAAACTCTCGGTTTCGCTGATGATGCCTCG
EV567011       --> -CTACGCTCCTGTTCTCTTTAAAACTCTCGGTTTCGCTGATGATGCCTCG
FD580610       --> -CTACGCTCCTGTTCTCTTTAAAACTCTCGGTTTCGCTGATGATGCCTCG
FD972391       --> -CTACGCTCCTGTTCTCTTTAAAACTCTCGGTTTCGCTGATGATGCCTCG

               1046   -   1096
UN16198        --> CTCATCTCTGCGGTCATCACCGGTGTGGTGAACGTTGTCTCTACCCTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542659       <-- CTCATCTCTGCGGTCATCACCGGTGTGGTGAACGTTGTCTCTACCCTTGT
EY928559       <-- ..................................................
EX747478       --> ..................................................
EX755840       --> ..................................................
FD564575       --> ..................................................
EV538712       --> CTCATCTCTGCGGTCATCACCGGTGTGGTGAACGTTGTCTCTACCCTTGT
FD980504       --> CTCATCTCTGCGGTTATCACCGGTGTGGTGAACGTTGTCTCTACCCTTGT
EV566763       --> CTCATCTCTGCGGTCATCACCGGTGTGGTGAACGTTGTCTCTACCCTTGT
EV567011       --> CTCATCTCTGCGGTCATCACCGGTGTGGTGAACGTTGTCTCTACCCTTGT
FD580610       --> CTCATCTCTGCGGTTATCACCGGTGTGGTGAACGTTGTCTCTACCCTTGT
FD972391       --> CTCATCTCTGCGGTCATCACCGGTGTGGTGAACGTTGTCTCTACCCTTGT

               1096   -   1146
UN16198        --> CTCCATCTATGCGGTTGACAGGTATGGAAGAAGGATTCTCTTCCTTGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542659       <-- CTCCATCTATGCGGTTGACATGTATGGAAGAAGGATTCTCTTCCTCGAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY928559       <-- ..................................................  Raphanus sativus var. oleiformis
EX747478       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX755840       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD564575       --> ..................................................  Raphanus sativus var. oleiformis
EV538712       --> CTCCATCTATGCGGTTGACATGTATGGAAGAAGGATTCTCTTCCTCGAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980504       --> CTCCATCTATGCGGTTGACAGGTATGGAAGAAGGATTCTCTTCCTTGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566763       --> CTCCATCTATGCGGTTGACAGGTATGGAAGAAGGATTCTCTTCCTTGAAG  Raphanus raphanistrum subsp. landra
EV567011       --> CTCCATCTATGCGGTTGACAGGTATGGAAGAAGGATTCTCTTCCTTGAAG  Raphanus raphanistrum subsp. landra
FD580610       --> CTCCATCTATGCGGTTGACAGGTATGGAAGAAGGATTCTCTTCCTTGAAG  Raphanus sativus cv Rat-Tail Radish #3870
FD972391       --> CTCCATCTATGCGGTTGACAGGTATGGAAGAAGGATTCTCTTCCTCGAAG  Raphanus raphanistrum subsp. raphanistrum (MS)

               1146   -   1196
UN16198        --> GTGGCATTCAAATGATCATTTGCCAGATCATTGTTGGTACCTTGATTGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542659       <-- GTGGCATTCAAATGATCATTTGCCAGATCATTGTTGGTACTTTGATTGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY928559       <-- ..................................................  Raphanus sativus var. oleiformis
EX747478       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX755840       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD564575       --> ..................................................  Raphanus sativus var. oleiformis
EV538712       --> GTGGCATTCAAATGATCATTTGCCAGATCATTGTTGGTACTTTGATTGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980504       --> GTGGCATTCAAATGATCATTTGCCAGATCATTGTTGGTACCTTGATTGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566763       --> GAGGCATTCAAATGATCATTTGCCAGATCATTGTTGGTACCTTGATTGGC  Raphanus raphanistrum subsp. landra
EV567011       --> GAGGCATTCAAATGATCATTTGCCAGATCATTGTTGGTACCTTGATTGGC  Raphanus raphanistrum subsp. landra
FD580610       --> GAGGCATTCAAATGATCATTTGCCAGATCATTGTTGGTACCTTGATTGGC  Raphanus sativus cv Rat-Tail Radish #3870
FD972391       --> GTGTCATTCAAATGATCATTTGCCAGATCATTGTTGGTACTTTGATTGGT  Raphanus raphanistrum subsp. raphanistrum (MS)

               1196   -   1246
UN16198        --> TTGAAGTTTGGTACCACAGGATCAGGGACCTTGACACCTGCAACAGCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542659       <-- ATGAATTTTGGTACCACAGGATCAGGGACCTTGACACCTGCAACAGCAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY928559       <-- ..................................................  Raphanus sativus var. oleiformis
EX747478       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX755840       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD564575       --> ..................................................  Raphanus sativus var. oleiformis
EV538712       --> ATGAATTTTGGTACCACAGGATCAGGGACCTTGACACCTGCAACAGCAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980504       --> TTGAAGTTTGGTACCACAGGATCAGGGACCTTGACACCTGCAACAGCAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566763       --> TTGAAGTTTGGTACAACAGGATCAGGGACCTTGACACCTGCAACAGCAAA  Raphanus raphanistrum subsp. landra
EV567011       --> TTGAAGTTTGGTACAACAGGATCAGGGACCTTGACACCTGCAACAGCAAA  Raphanus raphanistrum subsp. landra
FD580610       --> TCGAAGTTTGGTACCACAGGATCAGGGACCTTGACACCTGCAACAGCAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD972391       --> ATGAATTTTGGTACCACAGGATCAGGGACCTTGACACCTGCAACAGCAAA  Raphanus raphanistrum subsp. raphanistrum (MS)

               1246   -   1296
UN16198        --> TTGGGTCCTAGCTTTCATATGCATATACGTTGCAGGGTTTGCATGGTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542659       <-- TTGGGTCCTAGCTTTCATATGCATATACGTTGCAGGGTTTGCATGGTCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY928559       <-- ..................................................  Raphanus sativus var. oleiformis
EX747478       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX755840       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD564575       --> ..................................................  Raphanus sativus var. oleiformis
EV538712       --> TTGGGTCCTAGCTTTCATATGCATATACGTTGCAGGGTTTGCATGGTCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980504       --> TTGGGTTCTAGCTTTCATATGCATATACGTTGCAGGGTTTGCATGGTCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566763       --> TTGGGTCCTAGCTTTCATATGTATATACGTTGCAGGATTTGCATGGTCAT  Raphanus raphanistrum subsp. landra
EV567011       --> TTGGGTCCTAGCTTTCATATGTATATACGTTGCAGGATTTGCATGGTCAT  Raphanus raphanistrum subsp. landra
FD580610       --> TTGGGTCCTAGCTTTCATATGTATATACGTTGCAGGATTTGCATGGTCAT  Raphanus sativus cv Rat-Tail Radish #3870
FD972391       --> TTGGGTCCTAGCTTTCATATGCATATACGTTGCAGGGTTTGCATGGTCAT  Raphanus raphanistrum subsp. raphanistrum (MS)

               1296   -   1346
UN16198        --> GGGGTCCATTAGGATGGTTAGTACCAAGTGAGATCTGTCCGTTGGAAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542659       <-- GGGGTCCATTAGGATGGTTAGTACCAAGTGAGATCTGTCCTTTGGAAATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY928559       <-- ..................................................  Raphanus sativus var. oleiformis
EX747478       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX755840       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD564575       --> ..................................................  Raphanus sativus var. oleiformis
EV538712       --> GGGGTCCATTAG-ATGGTTAGTACCAAGTGAGATCTGTCCTTTGGAAATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980504       --> GGGGTCCATTACGATGGTTAGTACCAAGTGAGATCTGTCCGTTGGAAATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566763       --> GGGGTCCATTGGGATGGTTAGTACCAAGTGAGATCTGTCCGTTGGAAATC  Raphanus raphanistrum subsp. landra
EV567011       --> GGGGTCCATTGGGATGGTTAGTACCAAGTGAGATCTGTCCGTTGGAAATC  Raphanus raphanistrum subsp. landra
FD580610       --> GGGGTCCATTGGGATGGTTAGTACCAAGTGAGATCTGTCCGTTGGAAATC  Raphanus sativus cv Rat-Tail Radish #3870
FD972391       --> GGGGTCCATTAGGATGGTTAGTACCAAGTGAGATCTGTCCTTTGGAAATC  Raphanus raphanistrum subsp. raphanistrum (MS)

               1346   -   1396
UN16198        --> AGACCAGCGGGACAAGCCGTCAACGTTTCTGTCAACATGTTCTTCACTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542659       <-- AGACCAGCGGGACAAGCCGTCAATGTTTCTGTCAACATGTTCTTCACTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY928559       <-- ..................................................  Raphanus sativus var. oleiformis
EX747478       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX755840       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD564575       --> ..................................................  Raphanus sativus var. oleiformis
EV538712       --> AGACCAGCGGGACAAGCCGTCAATGTTTCTGTCAACATGTTCTTCACTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980504       --> AGACCAGCGGGACAAGCCGTCAACGTTTCTGTCAACATGTTCT.......  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566763       --> AGACCAGCGGGACAAGCCGTCAACGTTTCTGTCAACATGTTCTTCACTTT  Raphanus raphanistrum subsp. landra
EV567011       --> AGACCAGCGGGACAAGCCGTCAACGTTTCTGTCAACATGTTCTTCACTTT  Raphanus raphanistrum subsp. landra
FD580610       --> AGACCAGCGGGACAAGCCGTCAACGTTTCTGTCAACATGTTCTTCACTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD972391       --> AGACCAGCGGGACAAGCCGTCAATGTTTCTGTCAACATGTTCTTCACTTT  Raphanus raphanistrum subsp. raphanistrum (MS)

               1396   -   1446
UN16198        --> CCTCATTGGACAATTCTTTTTAACGATGCTTTGTCACATGAAGTTTGGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542659       <-- CCTCATTGGACAATTCTTTTTAACGATGCTTTGTCACATGAAGTTTGGTC
EY928559       <-- ..................................................
EX747478       --> ..................................................
EX755840       --> ..................................................
FD564575       --> ..................................................
EV538712       --> CCTCATTGGACAATTCTTTTTAACGATGCTTTGTCACATGAAGTTTGGTC
FD980504       --> ..................................................
EV566763       --> CCTCAT............................................
EV567011       --> CCTCATTGGACAATTCTTTTTAACGATGCTTTGTCACATGAAGTTTGGTC
FD580610       --> CCTCATTGGACA-TTCTTTT-AACGATGCTTTGTCACATGAAGTTTGGTC
FD972391       --> CCTCATTGGACAATTCTTTTTAACGATGCTTTGTCACATGAAGTTTGGTC

               1446   -   1496
UN16198        --> TCTTCTACTTCTTTGGAGGTATGGTCCTGATCATGACCGATCTTCATCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542659       <-- TCTTCTACTTCTTTGGAGGAATGGTCCTGATCATGAC-GATCTTCATCTA
EY928559       <-- ..TTCTACTTCTTTGGAGGTATGGTCCTGATCATGACCG-TCTTCATCTA
EX747478       --> ..................................................
EX755840       --> ..................................................
FD564575       --> ..................................................
EV538712       --> TCTTCTACTTCTTTGGAGatgtctgatcatgacg................
FD980504       --> ..................................................
EV566763       --> ..................................................
EV567011       --> TCTTCTACTTCTTTGGAGGTATGGTCCTGATCATGACCG-TCTTCATCTA
FD580610       --> TCTTCTACTTCTTTGGAGGTATGGTC-TGATCATGACg............
FD972391       --> TCTTCTACTTCTTTGGAGGAATGGTCCTGATCATGAC-GATCTTCATCTA

               1496   -   1546
UN16198        --> CTTCTTGTTGCCGGAGACAAAAGGGGTTCCTATTGAAGAAATGGGAAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542659       <-- CTTCTTGTTTCCGGAGACAAAAGGGGTTCCTATTGAAGAAATGGGAAGAG
EY928559       <-- CTTCTTGTTGCCGGAGACAAAAGGGGTTCCTATTGAAGAAATGGGAAGAG
EX747478       --> ..................................................
EX755840       --> ..................................................
FD564575       --> ..................................................
EV538712       --> ..................................................
FD980504       --> ..................................................
EV566763       --> ..................................................
EV567011       --> ..................................................
FD580610       --> ..................................................
FD972391       --> CTTCTTGTTGCCGGAGACAAAAGGGGTTCCTATTGAAGAAATGGGAAGAG

               1546   -   1596
UN16198        --> TGTGGAAGCAGCATCCCTTCTGGAAACGCTACATCCCAGATGATGCTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542659       <-- TGTGGAAGCAGCATCCCTTCTGGAAACGCTACATCCCAGATGATGCTGTT
EY928559       <-- TGTGGAAGCAGCATCCCTTCTGGAAACGTTACATCCCAGATGATGCTGTT
EX747478       --> ..................................................
EX755840       --> ..................................................
FD564575       --> ..................................................
EV538712       --> ..................................................
FD980504       --> ..................................................
EV566763       --> ..................................................
EV567011       --> ..................................................
FD580610       --> ..................................................
FD972391       --> TGTGGAAGCAGCATCCCTTCTGGAAACGCTACATCCCAGATGATGCTGTT

               1596   -   1646
UN16198        --> ATTGGAGGAAGTGAAGGGACTTCTGTCAAGGAGGTTTAAGATTTTCAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542659       <-- ATTGGAGGAAGTGAAGGGACTTCTGTCAAGGAGGTTTAAGATTTTCAAGA
EY928559       <-- ATTGGAGGAAGTGGACAGACTTCTGTCAAGGAGGTTTAAGATTTTCAAGA
EX747478       --> ..................................................
EX755840       --> ..................................................
FD564575       --> ..................................................
EV538712       --> ..................................................
FD980504       --> ..................................................
EV566763       --> ..................................................
EV567011       --> ..................................................
FD580610       --> ..................................................
FD972391       --> ATTGGAGGAAGTGAAGGGACTTCTGTCAAGGAGGTTTAAGATTTTCAAGA

               1646   -   1696
UN16198        --> AAAGTCTAGGCACTGGTTTTGCTTAGCCACTTGTATTTGGTTGCTGAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542659       <-- AAAGTCTAGGCACTGGTTTTGCTTAGCCACTTGTATTTGGTTGCTGAATA
EY928559       <-- AAAGTCTAGGCACTGGTTTTGCTTAGCCACTTGTATTTGGTTGCTGAATA
EX747478       --> ..................................................
EX755840       --> ..................................................
FD564575       --> ..................................................
EV538712       --> ..................................................
FD980504       --> ..................................................
EV566763       --> ..................................................
EV567011       --> ..................................................
FD580610       --> ..................................................
FD972391       --> AAAGTCTAGGCACTGGTTTTGCTTAGCCACTTGTATTTGGTTGCTG....

               1696   -   1746
UN16198        --> AGCCAACACGATGTGAGAATCTCAGGTCGAGAGGACAAGAAGAAGAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542659       <-- AGCCAACACGATGTGAGAATCTCAGGCCGAGAGGACAAGAAGAAGAAGAA
EY928559       <-- AGCCAACACGATGTGAGAATCTCAGGTCGAGAGGACAAGAAGAAGAAGAA
EX747478       --> ..................................................
EX755840       --> ..................................................
FD564575       --> ..................................................
EV538712       --> ..................................................
FD980504       --> ..................................................
EV566763       --> ..................................................
EV567011       --> ..................................................
FD580610       --> ..................................................
FD972391       --> ..................................................

               1746   -   1796
UN16198        --> AGGAAACTGTTAAAAAAAAGTTTTAATGT--AATTCTTTTACTT-GATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542659       <-- AGGAAACTGTTAAAAAAA-GTTTTAATATTGAATTCTTTTACTTAGATTT
EY928559       <-- AGGAAACTGTTAAAAAAAAGTTTTAATGT--AATTCTTTTACTT-GATTT
EX747478       --> ..................................................
EX755840       --> ..................................................
FD564575       --> ..................................................
EV538712       --> ..................................................
FD980504       --> ..................................................
EV566763       --> ..................................................
EV567011       --> ..................................................
FD580610       --> ..................................................
FD972391       --> ..................................................

               1796   -   1846
UN16198        --> CATTCCAATAAAAGCAGAATTTTTC.
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542659       <-- CATTCCAATAAAAGCAGAATTTT...
EY928559       <-- CATTCCAATAAAAGCAGAATTTTTCc
EX747478       --> ..........................
EX755840       --> ..........................
FD564575       --> ..........................
EV538712       --> ..........................
FD980504       --> ..........................
EV566763       --> ..........................
EV567011       --> ..........................
FD580610       --> ..........................
FD972391       --> ..........................