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Alignment for radish unigene UN16204

               1      -     51
UN16204        --> GGAAAGGAACCTCATCTATCTCT-ATCAATCAACACAATGTCTTCTTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY929074       <-- ..................................................  Raphanus sativus var. oleiformis
EX898501       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV571314       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY928955       <-- ..................................................  Raphanus sativus var. oleiformis
EW730503       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX898770       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV540008       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX892541       <-- ..................................................  Raphanus sativus var. oleiformis
FD537316       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537577       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX758806       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY927316       <-- ..................................................  Raphanus sativus var. oleiformis
EY926971       <-- ..................................................  Raphanus sativus var. oleiformis
FD935845       <-- ..................................................  Raphanus sativus var. oleiformis
FD566035       <-- ..................................................  Raphanus sativus var. oleiformis
EY920534       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD567408       <-- ..................................................  Raphanus sativus var. oleiformis
FD565651       <-- ..................................................  Raphanus sativus var. oleiformis
EY936593       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV535287       --> GGAAAGCAACCTCATCTATCTCT-ACCAATCAACACAATGTCTTCTTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541255       --> GGAAAGCAACCTCATCTATCTCT-ACCAATCAACACAATGTCTTCTTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD990193       --> GGAAAGCAATCTCATCTATCTATCATCAATCAACACAATGTCTTCTTCTT  Raphanus raphanistrum subsp. landra
EV566108       --> .....GGAACCTCATCTATCTCT-ATCAATCAACACAATGTCTTCTTCTT  Raphanus raphanistrum subsp. landra
EW733179       --> .....GGAATCTCATCTATCTATCATCAATCAACACAATGTCTTCTTCTT  Raphanus sativus cv Rat-Tail Radish #3870
EX754491       --> .....GGAACCTCATCTATCTCT-ACCAATCAACACAATGTCTTCTTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY924947       --> .....GGAACCTCATCTATCTCT-ATCAATCAACACAATGTCTTCTTCTT  Raphanus raphanistrum subsp. landra
EY940906       --> ..aggGGAACCTCATCTATCTCT-ATCAATCAACACAATGTCTTCTTCTT  Raphanus sativus cv Early Scarlet Globe
FD540909       --> .....GGAACCTCATCTATCTCT-ACCAATCAACACAATGTCTTCTTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD561502       --> .....GGAACCACATCTATCTATCATCAATCAACACAATGTCTTCTTCTT  Raphanus sativus var. oleiformis
FD989294       --> .....GGAATCTCATCTATCTATCATCAATCAACACAATGTCTTCTTCTT  Raphanus raphanistrum subsp. landra
EX755604       --> ......GAACCTCATCTATCTCT-ACCAATCAACACAATGTCTTCTTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933658       --> ..................................................  Raphanus sativus var. oleiformis
EY906349       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX888641       --> ..................................................  Raphanus sativus var. oleiformis

               51     -    101
UN16204        --> ------ATTCTTCACTTACACTCTTCATCTTCTTATTCGCTTCTGCCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY929074       <-- ..................................................
EX898501       <-- ..................................................
EV571314       <-- ..................................................
EY928955       <-- ..................................................
EW730503       <-- ..................................................
EX898770       <-- ..................................................
EV540008       <-- ..................................................
EX892541       <-- ..................................................
FD537316       <-- ..................................................
FD537577       <-- ..................................................
EX758806       <-- ..................................................
EY927316       <-- ..................................................
EY926971       <-- ..................................................
FD935845       <-- ..................................................
FD566035       <-- ..................................................
EY920534       <-- ..................................................
FD567408       <-- ..................................................
FD565651       <-- ..................................................
EY936593       <-- ..................................................
EV535287       --> ------ATTCTTCACTTACACTCTTCATCTTCTTATTCGCTTCTGCCTTC
FD541255       --> ------ATTCTTCACTTACACTCTTCATCTTCTTATTCGCTTCTGCCTTC
FD990193       --> CTTCGTATTCTTCACTAACACTCTTCTTCTTCTTATTCGCTTCTGTCTTC
EV566108       --> ------ATTCTTCACTTACACTCTTCATCTTCTTATTCGCCTCTGCCTTC
EW733179       --> CTTCGTATTCTTCACCAACACTCTTCTTCTTCTTATTCGCTTCTGTCTTC
EX754491       --> ------ATTCTTCACTTACACTCTTCATCTTCTTATTCGCTTCTGCCTTC
EY924947       --> ------ATTCTTCACTTACACTCTTCATCTTCTTATTCGCCTCTGCCTTC
EY940906       --> ---CTTATTCTTCACTTACACTCTTC---TTCTTACTCGCTTCTGCCTTC
FD540909       --> ------ATTCTTCACTTACACTCTTCATCTTCTTATTCGCTTCTGCCTTC
FD561502       --> ------CTTCTTCACTAACACTCTTCTTCTTTTTATTCGCCTCTGCCTTC
FD989294       --> CTTCGTATTCTTCACTAACACTCTTCTTCTTCTTATTCGCTTCTGTCTTC
EX755604       --> ------ATTCTTCACTTACACTCTTCATCTTCTTATTCGCTTCTGCCTTC
EY933658       --> ..................................................
EY906349       --> ..................................................
EX888641       --> ..................................................

               101    -    151
UN16204        --> CTCTACACTCCATCAAACTCATTCAACATCACAACCATCTTAAGCCAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY929074       <-- ..................................................
EX898501       <-- ..................................................
EV571314       <-- ..................................................
EY928955       <-- ..................................................
EW730503       <-- ..................................................
EX898770       <-- ..................................................
EV540008       <-- ..................................................
EX892541       <-- ..................................................
FD537316       <-- ..................................................
FD537577       <-- ..................................................
EX758806       <-- ..................................................
EY927316       <-- ..................................................
EY926971       <-- ..................................................
FD935845       <-- ..................................................
FD566035       <-- ..................................................
EY920534       <-- ..................................................
FD567408       <-- ..................................................
FD565651       <-- ..................................................
EY936593       <-- ..................................................
EV535287       --> CTCTACACTCCATCAAACTCATTCAACATCACAACCATCTTGAGCCAATA
FD541255       --> CTCTACACTCCATCAAACTCATTCAACATCACAACCATCTTAAGCCAAAA
FD990193       --> CTCTACACTCCATCAAACTCATTCAACATCACAACCATCTTAAGCCAAAA
EV566108       --> CTCTACACTCCATCAAACTCATTCAACATCACAACCATCTTAAGCCAAAA
EW733179       --> CTCTACACTCCATCAAACTCATTCAACATCACAACCATCTTAAGCCAAA-
EX754491       --> CTCTACACTCCATCAAACTCATTCAACATCACAACCATCTTAAGCCAAAA
EY924947       --> CTCTACACTCCATCAAACTCATTCAACATCACAACCATCTTAAGCCAAAA
EY940906       --> ATCTACACTCCATCAAACTCATTCAACATCACAACCATCTTAAGCCAAAA
FD540909       --> CTCTACACTCCATCAAACTCATTCAACATCACAACCATCTTAAGCCAAAA
FD561502       --> CTCTACACTCCATCAAACTCATTCAACATCACAACCATCTTAAGCCAAAA
FD989294       --> CTCTACACTCCATCAAACTCATTCAACATCACAACCATCTTAAGCCAAAA
EX755604       --> CTCTACACTCCATCAAACTCATTCAACATCACAACCATCTTAAGCCAAAA
EY933658       --> ...................CATTCAACATCACAACCATCTTAAGCCAAAA
EY906349       --> ..................................................
EX888641       --> ..................................................

               151    -    201
UN16204        --> CAAAAACTTCTCCGATTTCAACAAAATGCTCTCCCAGACCCAACTCGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY929074       <-- ..................................................
EX898501       <-- ..................................................
EV571314       <-- ..................................................
EY928955       <-- ..................................................
EW730503       <-- ..................................................
EX898770       <-- ..................................................
EV540008       <-- ..................................................
EX892541       <-- ..................................................
FD537316       <-- ..................................................
FD537577       <-- ..................................................
EX758806       <-- ..................................................
EY927316       <-- ..................................................
EY926971       <-- ..................................................
FD935845       <-- ..................................................
FD566035       <-- ..................................................
EY920534       <-- ..................................................
FD567408       <-- ..................................................
FD565651       <-- ..................................................
EY936593       <-- ..................................................
EV535287       --> CAAAAACTTCTCCGATTTCAACAAAATGCTCTCCCAGACCCAACTCGCTT
FD541255       --> CAAAAACTTCTCCGATTTCAACAAAATGCTCTCCCAGACCCAACTCGCTT
FD990193       --> CAAAAACTTCTCCGATTTCAACAAGATGCTCTCCCAGACCCAACTCGCTT
EV566108       --> CAAAAACTTCTCCGATTTCAACAAAATGCTCTCCCAGACCCAGCTCGCTT
EW733179       --> CAAAAACTTCTCCGATTTCAACAAGATGCTCTCCCAGACCCAACTCGCTT
EX754491       --> CAAAAACTTCTCCGATTTCAACAAAATGCTCTCCCAGACCCAACTCGCTT
EY924947       --> CAAAAACTTCTCCGATTTCAACAAAATGCTCTCCCAGACCCAGCTCGCTT
EY940906       --> CAAAAACTTCTCCGATTTCAACAAAATGCTCTCCCAGACCCAACTCGCTT
FD540909       --> CAAAAACTTCTCCGATTTCAACAAAATGCTCTCCCAGACCCAACCCGCTT
FD561502       --> CAAAAACTTCTCCGATTTCAACAAAATGCTCTCCCAGACCCAGCTCGCTT
FD989294       --> CAAAAACTTCTCCGATTTCAACAAGATGCTCTCCCAGACCCAACTCGCTT
EX755604       --> CAAAAACTTCTCCGATTTCAACAAAATGCTCTCCCAGACCCAACTCGCTT
EY933658       --> CAAAAACTTCTCCGATTTCAACAAAATGCTCTCCCAGACCCAACTCGCTT
EY906349       --> ............................................gCGCTT
EX888641       --> ..................................................

               201    -    251
UN16204        --> CCACCATCAACTCCCGTCAAACCATAACCGTCCTCGCCCTCTCCAACGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY929074       <-- ..................................................
EX898501       <-- ..................................................
EV571314       <-- ..................................................
EY928955       <-- ..................................................
EW730503       <-- ..................................................
EX898770       <-- ..................................................
EV540008       <-- ..................................................
EX892541       <-- ..................................................
FD537316       <-- ..................................................
FD537577       <-- ..................................................
EX758806       <-- ..................................................
EY927316       <-- ..................................................
EY926971       <-- ..................................................
FD935845       <-- ..................................................
FD566035       <-- ..................................................
EY920534       <-- ..................................................
FD567408       <-- ..................................................
FD565651       <-- ..................................................
EY936593       <-- ..................................................
EV535287       --> CCACCATCAACTCCCGTCAAACCATAACCGTCCTCGCCCTCTCCAACGAC
FD541255       --> CCACCATCAACTCCCGTCAAACCATAACCGTCCTCGCCCTCTCCAACGAC
FD990193       --> CCACCATCAACTCCCGTCAAACCATAACCGTCCTCGCCCTCTCCAACGAC
EV566108       --> CCACCATCAACTCCCGTCAAACCATAACCGTCCTCGCCCTCTCCAACGAC
EW733179       --> CCACCATCAACTCCCGTCAAACCATAACCGTCCTCGCCCTCTCCAACGAC
EX754491       --> CCACCATCAACTCCCGTCAAACCATAACCGTCCTCGCCCTCTCCAACGAC
EY924947       --> CCACCATCAACTCCCGTCAAACCATAACCGTCCTCGCCCTCTCCAACGAC
EY940906       --> CCACCATCAACTCCCGCCAAACCATAACCGTCCTCGCCCTCTCCAACGAC
FD540909       --> CCACCATCAACTCCCGTCAAACCATAACCGTCCTCGCCCTCTCCAACGAC
FD561502       --> CCACCATCAACTCCCGTCAAACCATAACCGTCCTCGCCCTCTCCAACGAC
FD989294       --> CCACCATCAACTCCCGTCAAACCATAACCGTCCTCGCCCTCTCCAACGAC
EX755604       --> CCACCATCAACTCCCGTCAAACCATAACCGTCCTCGCCCTCTCCAACGAC
EY933658       --> CCACCATCAACTCCCGCCAAACCATAACCGTCCTCGCCCTCTCCAACGAC
EY906349       --> CCACCATCAACTCCCGTCAAACCATAACCGTCCTCGCCCTCTCCAACGAC
EX888641       --> ..................................................

               251    -    301
UN16204        --> GCAATGTCCTTCTTCTCCAGCCAATCGGTCGAAGAAAACAAGAGAGCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY929074       <-- ..................................................
EX898501       <-- ..................................................
EV571314       <-- ..................................................
EY928955       <-- ..................................................
EW730503       <-- ..................................................
EX898770       <-- ..................................................
EV540008       <-- ..................................................
EX892541       <-- ..................................................
FD537316       <-- ..................................................
FD537577       <-- ..................................................
EX758806       <-- ..................................................
EY927316       <-- ..................................................
EY926971       <-- ..................................................
FD935845       <-- ..................................................
FD566035       <-- ..................................................
EY920534       <-- ..................................................
FD567408       <-- ..................................................
FD565651       <-- ..................................................
EY936593       <-- ..................................................
EV535287       --> GCAATGTCCTTCTTCTCCAGCCAATCGGTCGAAGAAAACAAGAGAGCCTT
FD541255       --> GCAATGTCCTTCTTCTCCAGCCAATCGGTCGAAGAAAACAAGAGAGCCTT
FD990193       --> GCAATGTCCTTTTTCTCCAGCCAATCGGTCGAAGAAAGCAAGAGAGCCTT
EV566108       --> GCAATGTCCTTCTTCTCCAGCCAATCGGTCGAAGAAAACAAGAGAGCCTT
EW733179       --> GCAATGTCCTTTTTCTCCAGCCAATCGGTCGAAGAAAACAAGAGAGCCTT
EX754491       --> GCAATGTCCTTCTTCTCCAGCCAATCGGTCGAAGAAAACAAGAGAGCCTT
EY924947       --> GCAATGTCCTTCTTCTCCAGCCAATCGGTCGAAGAAAACAAGAGAGCCTT
EY940906       --> GCAATGTCCTTCTTCTCCAGCCAATCGATCGAAGAAAACAAGAGAGCCTT
FD540909       --> GCAATGTCCTTCTTCTCCAGCCAATCGGTCGAAGAAAACAAGAGAGCCTT
FD561502       --> GCAATGTCCTTCTTCTCCAGCCAATCGGTCGAAGAAAACAAGAGAGCCTT
FD989294       --> GCAATGTCCTTTTTCTCCAGCCAATCGGTCGAAGAAAACAAGAGAGCCTT
EX755604       --> GCAATGTCCTTCTTCTCCAGCCAATCGGTCGAAGAAAACAAGAGAGCCTT
EY933658       --> GCAATGTCCTTCTTCTCCAGTCAATCGATCGAAGAAAACAAGAGAGCCTT
EY906349       --> GCAATGTCCTTCTTCTCCAGCCAATCGGTCGAAGAAAACAAGAGAGCCTT
EX888641       --> ..................................................

               301    -    351
UN16204        --> CAGCCTCCACGTCGTCCTAGACTACTACGACATCAAGAAACTCAAGAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY929074       <-- ....CTCCACGTCGTCCTAGACTACTACGACATCAAGAAACTCAAGAGC-
EX898501       <-- .....................CTACTACGACATCAAGAAACTCAAGAGC-
EV571314       <-- ......................TACTACGACATCAAGAAACTCAAGAGCC
EY928955       <-- ..................................................
EW730503       <-- ..................................................
EX898770       <-- ..................................................
EV540008       <-- ..................................................
EX892541       <-- ..................................................
FD537316       <-- ..................................................
FD537577       <-- ..................................................
EX758806       <-- ..................................................
EY927316       <-- ..................................................
EY926971       <-- ..................................................
FD935845       <-- ..................................................
FD566035       <-- ..................................................
EY920534       <-- ..................................................
FD567408       <-- ..................................................
FD565651       <-- ..................................................
EY936593       <-- ..................................................
EV535287       --> CAGCCTCCACGTCGTCCTAGACTACTACGACATCAAGAAACTCAAGAGCC
FD541255       --> CAGCCTCCACGTCGTCCTAGACTACTACGACATCAAGAAACTCAAGAGCC
FD990193       --> CAGCCTCCACGTCGTCCTAGACTACTACGACATCAAGAAACTCAAGAGCC
EV566108       --> CAGCCTCCACGTCGTCCTAGACTACTACGACATCAAGAAACTCAAGAGCC
EW733179       --> CAGCCTCCACGTCGTCCTAGACTACTACGACATCAAGAAACTCAAGAGCC
EX754491       --> CAGCCTCCACGTCGTCCTAGACTACTACGACATCAAGAAACTCAAGAGCC
EY924947       --> CAGCCTCCACGTCGTCCTAGACTACTACGACATCAAGAAACTCAAGAGCC
EY940906       --> CAGCCTCCACGTCGTCCTAGACTACTACGACATCAAGAAACTCAAGAGCC
FD540909       --> CAGCCTCCACGTCGTCCTGGACTACTACGACATCAAGAAACTTAAAAGCC
FD561502       --> CAGCCTCCACGTCGTCCTAGACTACTACGACATCAAGAAACTCAAGAGCC
FD989294       --> CAGCCTCCACGTCGTCCTAGACTACTACGACATCAAGAAACTCAAGAGCC
EX755604       --> CAGCCTCCACGTCGTCCTAGACTACTACGACATCAAGAAACTCAAGAGCC
EY933658       --> CAGCCTCCACGTCGTCCTAGACTACTACGACATCAAGAAACTCAAGAGCC
EY906349       --> CAGCCTCCACGTCGTCCTAGACTACTACGACATCAAGAAACTCAAGAGCC
EX888641       --> ..................................................

               351    -    401
UN16204        --> TGAGCAAGAAAACAGCGTTACTCACCACTCTCTTCCAATCAAGCGGTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY929074       <-- TGAGCAAGAAAACAGCGTTACTCACCACTCTCTTCCAATCAAGCGGTCAA  Raphanus sativus var. oleiformis
EX898501       <-- TGAGCAAGAAAACAGCGTTACTCACCACTCTCTTCCAATCAAGCGGTCAA  Raphanus sativus cv Early Scarlet Globe
EV571314       <-- -GAGCAAGAAAACAGCGTTACTCACCACTCTCTTCCAATCGAGCGGTCAA  Raphanus raphanistrum subsp. landra
EY928955       <-- .......GAAAACAGCGTTACTCACCACTCTCTTCCAATCAAGCGGTCAA  Raphanus sativus var. oleiformis
EW730503       <-- ............CAGCGTTACTCACCACTCTCTTCCAATCAAGCGGTCAA  Raphanus sativus cv Early Scarlet Globe
EX898770       <-- ..........................ACTCTCTTCCAATCAAGCGGTCAA  Raphanus sativus cv Early Scarlet Globe
EV540008       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX892541       <-- ..................................................  Raphanus sativus var. oleiformis
FD537316       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537577       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX758806       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY927316       <-- ..................................................  Raphanus sativus var. oleiformis
EY926971       <-- ..................................................  Raphanus sativus var. oleiformis
FD935845       <-- ..................................................  Raphanus sativus var. oleiformis
FD566035       <-- ..................................................  Raphanus sativus var. oleiformis
EY920534       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD567408       <-- ..................................................  Raphanus sativus var. oleiformis
FD565651       <-- ..................................................  Raphanus sativus var. oleiformis
EY936593       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV535287       --> TGAGCAAGAAAACAGCGATACTCACCACTCTCTTCCAATCAAGCGGTCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541255       --> TGAGCAAGAAAACAGCGATACTCACCACTCTCTTCCAATCAAGCGGTCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD990193       --> TGAGCAAGAAAACAGCGTTACTCACCACTCTCTTCCAATCAAGCGGTCAA  Raphanus raphanistrum subsp. landra
EV566108       --> TGAGCAAGAAAACAGCGTTACTCACCACTCTCTTCCAATCGAGCGGTCAA  Raphanus raphanistrum subsp. landra
EW733179       --> TGAGCAAGAAAACAGCGTTACTCACCACTCTCTTCCAATCAAGCGGTCAA  Raphanus sativus cv Rat-Tail Radish #3870
EX754491       --> TGAGCAAGAAAACAGCGATACTCACCACTCTCTTCCAATCAAGCGGTCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY924947       --> TGAGCAAGAAAACAGCGTTACTCACCACTCTCTTCCAATCAAGCGGTCAA  Raphanus raphanistrum subsp. landra
EY940906       --> TGAGCAAGAAAACAGCGTTACTCACCACTCTCTTCCAATCAAGCGGTCAA  Raphanus sativus cv Early Scarlet Globe
FD540909       --> TGAGCAAGAAAACAGCGATACTCACCACTCTCTTCCAATCAAGCGGTCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD561502       --> TGAGCAAGAAAACAGCGTTACTCACCACTCTCTTCCAATCAAGCGGTCAA  Raphanus sativus var. oleiformis
FD989294       --> TGAGCAAGAAAACAGCGTTACTCACCACTCTCTTCCAATCAAGCGGTCAA  Raphanus raphanistrum subsp. landra
EX755604       --> TGAGCAAGAAAACAGCGATACTCACCACTCTCTTCCAATCAAGCGGTCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933658       --> TGAGCAAGAAAACAGCGTTACTCACCACTCTCTTCCAATCAAGCGGTCAA  Raphanus sativus var. oleiformis
EY906349       --> TGAGCAAGAAAACAGCGATACTCACCACTCTCTTCCAATCAAGTGGCCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX888641       --> ...GCAAGAAAACAGCGTTACTCACCACTCTCTTCCAATCAAGCGGTCAA  Raphanus sativus var. oleiformis

               401    -    451
UN16204        --> GCCAAAGGCAAACAAGGGTTCATAAACGTAACCGTTAATAATAACGGCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY929074       <-- GCCAAAGGCAAACAAGGGTTCATAAACGTAACCGTTAACAATAACGGCGA  Raphanus sativus var. oleiformis
EX898501       <-- GCCAAAGGCAAACAAGGGTTCATAGACGTAACCGTTAACAATAACGGCGA  Raphanus sativus cv Early Scarlet Globe
EV571314       <-- GCCAAAGGCAAACAAGGGTTCATAAACGTAACCGTTAATAATAACGGCGA  Raphanus raphanistrum subsp. landra
EY928955       <-- GCCAAAGGCAAACAAGGGTTCATAAACGTAACCGTTAACAATAACGGCGA  Raphanus sativus var. oleiformis
EW730503       <-- GCCAAAGGCAAACAAGGGTTCATAAACGTAACCGTTAACAATAACGGCGA  Raphanus sativus cv Early Scarlet Globe
EX898770       <-- GCCAAAGGCGAACAAGGGTTCATAAACGTAACCGTTAACAATAACGGCGA  Raphanus sativus cv Early Scarlet Globe
EV540008       <-- ...........ACAAGGGTTCATAAACGTAACCGTTAATAACAACGGCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX892541       <-- ...........ACAAGGGTTCATAAACGTAACCGTTAACAATAACGGCGA  Raphanus sativus var. oleiformis
FD537316       <-- ................GGTTCATAAACGTAACCGTTAATAACAACGGCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537577       <-- ....................................AATAACAACGGCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX758806       <-- ...................................ttATAACAACGGCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY927316       <-- ..................................................  Raphanus sativus var. oleiformis
EY926971       <-- ..................................................  Raphanus sativus var. oleiformis
FD935845       <-- ..................................................  Raphanus sativus var. oleiformis
FD566035       <-- ..................................................  Raphanus sativus var. oleiformis
EY920534       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD567408       <-- ..................................................  Raphanus sativus var. oleiformis
FD565651       <-- ..................................................  Raphanus sativus var. oleiformis
EY936593       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV535287       --> GCCAAAGGCAAACAAGGGTTCATAAACGTAACCGTTAATAACAACGGCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541255       --> GCCAAAGGCAAACAAGGGTTCATAAACGTAACCGTTAATAACAACGGCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD990193       --> GCCAAAGGCAAACAAGGGTTCATAAACGTAACCGTTAACAATAACGGCGA  Raphanus raphanistrum subsp. landra
EV566108       --> GCCAAAGGCAAACAAGGGTTCATAAACGTAACCGTTAATAATAACGGCGA  Raphanus raphanistrum subsp. landra
EW733179       --> GCCAAAGGCAAACAAGGGTTCATAAACGTAACCGTTAACAATAACGGCGA  Raphanus sativus cv Rat-Tail Radish #3870
EX754491       --> GCCAAAGGCAAACAAGGGTTCATAAACGTAACCGTTAATAACAACGGCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY924947       --> GCCAAAGGCAAACAAGGGTTCATAAACGTAACCGTTAATAATAACGGCGA  Raphanus raphanistrum subsp. landra
EY940906       --> GCCAAAGGCAAACAAGGGTTCATAAACGTAACCGTTAACAATAACGGCGA  Raphanus sativus cv Early Scarlet Globe
FD540909       --> GCCAAAGGCAAACAAGGGTTCATAAACGTAACCGTTAATAACAACGGCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD561502       --> GCCAAAGGCAAACAAGGGTTCATAAACGTAACCGTTAACAATAACGGCGA  Raphanus sativus var. oleiformis
FD989294       --> GCCAAAGGCAAACAAGGGTTCATAAACGTAACCGTTAACAATAACGGCGA  Raphanus raphanistrum subsp. landra
EX755604       --> GCCAAAGGCAAACAAGGGTTCATAAACGTAACCGTTAATAACAACGGCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933658       --> GCCAAAGGCAAACAAGGGTTCATAAACGTAACCGTTAACAATAACGGCGA  Raphanus sativus var. oleiformis
EY906349       --> GCCAAAGGCAAACAAGGGTTCATAAACGTAACTGTTAATAACAACGGCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX888641       --> GCCAAAGGCAAACAAGGGTTCATAAACGTAACCGTTAACAATAACGGCGA  Raphanus sativus var. oleiformis

               451    -    501
UN16204        --> CGTTATGTTTGGATCTGCGGTTTATGGTTCTCTCCTTGACGCTCAGCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY929074       <-- CGTCATGTTTGGATCTGCGGTTTATGGTTCTCTCCTTGACGCTCATCTTT  Raphanus sativus var. oleiformis
EX898501       <-- CGTCATGTTTGGATCTGCGGTTTATGGTTCTCTCCTTGACGCTCAGCTTT  Raphanus sativus cv Early Scarlet Globe
EV571314       <-- CGTTATGTTTGGATCTGCGGTTTATGGTTCTCTCCTTGACGCTCAGCTTT  Raphanus raphanistrum subsp. landra
EY928955       <-- CGTCATGTTTGGATCTACGGTTTATGGTTCTCTCCTTGACGCTCAGCTTT  Raphanus sativus var. oleiformis
EW730503       <-- CGTCATGTTTGGATCTGCGGTTTATGGTTCTCTCCTTGACGCTCAGCTTT  Raphanus sativus cv Early Scarlet Globe
EX898770       <-- CGTCATGTTTGGATCTGCGGTTTATGGTTCTCTCCTTGACGCTCAGCTTT  Raphanus sativus cv Early Scarlet Globe
EV540008       <-- CGTTATGTTTGGATCTGCGGTTTATGGTTCTCTCCTTGATGCTCAGCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX892541       <-- CGTCATGTTTGGATCTGCGGTTTATGGTTCTCTCCTTGACGCTCAGCTTT  Raphanus sativus var. oleiformis
FD537316       <-- CGTTATGTTTGGATCTGCGGTTTATGGTTCTCTCCTTGATGCTCAGCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537577       <-- CGTTATGTTTGGATCTGCGGTTTATGGTTCTCTCCTTGATGCTCAGCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX758806       <-- CGTTATGTTTGGATCTGCGGTTTATGGTTCTCTCCTTGATGCTCAGCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY927316       <-- .............TCTGCGGTTTATGGTTCTCTCCTTGACGCTCAGCTTT  Raphanus sativus var. oleiformis
EY926971       <-- ........................TGGTTCTCTCCTCGACGCTCAGCTTC  Raphanus sativus var. oleiformis
FD935845       <-- ..................................................  Raphanus sativus var. oleiformis
FD566035       <-- ..................................................  Raphanus sativus var. oleiformis
EY920534       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD567408       <-- ..................................................  Raphanus sativus var. oleiformis
FD565651       <-- ..................................................  Raphanus sativus var. oleiformis
EY936593       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV535287       --> CGTTATGTTTGGATCTGCGGTTTATGGTTCTCTCCTTGATGCTCAGCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541255       --> CGTTATGTTTGGATCTGCGGTTTATGGTTCTCTCCTTGATGCTCAGCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD990193       --> CGTTATGTTTGGATCTGCGGTTTATGGTTCTCTCCTTGACGCTCAGCTTT  Raphanus raphanistrum subsp. landra
EV566108       --> CGTTATGTTTGGATCTGCGGTTTATGGTTCTCTCCTTGACGCTCAGCTTT  Raphanus raphanistrum subsp. landra
EW733179       --> CGTTATGTTTGGATCTGCGGTTTATGGTTCTCTCCTTGACGCTCAGCTTT  Raphanus sativus cv Rat-Tail Radish #3870
EX754491       --> CGTTATGTTTGGATCTGCGGTTTATGGTTCTCTCCTTGATGCTCAGCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY924947       --> CGTTATGTTTGGATCTGCGGTTTATGGTTCTCTCCTTGACGCTCGGCTTT  Raphanus raphanistrum subsp. landra
EY940906       --> CGTCATGTTTGGATCTGCGGTTTATGGTTCTCTCCTTGACGCTCAGCTTT  Raphanus sativus cv Early Scarlet Globe
FD540909       --> CGTTATGTTTGGATCTGCGGTTTATGGTTCTCTCCTTGATGCTCAGCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD561502       --> CGTCATGTTTGGATCTGCGGTTTATGGTTCTCTCCTCGACGCTCAGCTTC  Raphanus sativus var. oleiformis
FD989294       --> CGTTATGTTTGGATCTGCGGTTTATGGTTCTCTCCTTGACGCTCAGCTTT  Raphanus raphanistrum subsp. landra
EX755604       --> CGTTATGTTTGGATCTGCGGTTTATGGTTCTCTCCTTGATGCTCAGCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933658       --> CGTCATGTTTGGATCTGCGGTTTATGGTTCTCTCCTTGACGCTCATCTTT  Raphanus sativus var. oleiformis
EY906349       --> CGTTATGTTTGGATCTGCGGTTTATGGTTCTCTCCTTGATGCTCAGCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX888641       --> CGTCATGTTTGGATCTGCGGTTTATGGTTCTCTCCTTGACGCTCAGCTTT  Raphanus sativus var. oleiformis

               501    -    551
UN16204        --> TAGAGTCGGTTGCGTCAGAGCCGTTTAACATCTCGGTGCTTCATATTAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY929074       <-- TAGAGTCGGTTGCGTCGGAGCCGTTTAACATCTCGGTGCTTCATATTAGC  Raphanus sativus var. oleiformis
EX898501       <-- TAGAGTCGGTTGCGTCGGAGCCGTTTAACATCTCGGTGCTTCATATTAGC  Raphanus sativus cv Early Scarlet Globe
EV571314       <-- TAGAGTCGGTTGCGTCAGAGCCGTTTAACATCTCGGTGCTTCATATTAGC  Raphanus raphanistrum subsp. landra
EY928955       <-- TAGAGTCGGTTGCGTCGGAGCCGTTTAACATCTCGGTGCTTCATATTAGC  Raphanus sativus var. oleiformis
EW730503       <-- TAGAGTCGGTTGCGTCGGAGCCGTTTAACATCTCGGTGCTTCATATTAGC  Raphanus sativus cv Early Scarlet Globe
EX898770       <-- TAGAGTCGGTTGCGTCGGAGCCGTTTAACATCTCGGTGCTTCATATTAGC  Raphanus sativus cv Early Scarlet Globe
EV540008       <-- TAGAGTCGGTTGCGTCAGAGCCGTTTAACATCTCGGTGCTTCATATTAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX892541       <-- TAGAGTCGGTTGCGTCGGAGCCGTTTAACATCTCGGTGCTTCATATTAGC  Raphanus sativus var. oleiformis
FD537316       <-- TAGAGTCGGTTGCGTCAGAGCCGTTTAACATCTCGGTGCTTCATATTAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537577       <-- TAGAGTCGGTTGCGTCAGAGCCGTTTAACATCTCGGTGCTTCATATTAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX758806       <-- TAGAGTCGGTTGCGTCAGAGCCGTTTAACATCTCGGTGCTTCATATTAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY927316       <-- TAGAGTCGGTTGCGTCGGAGCCGTTTAACATCTCGGTGCTTCATATTAGC  Raphanus sativus var. oleiformis
EY926971       <-- TAGACTCGGTTGCGTCAGAGCCGTTTAACATCTCGGTGCTTCATATTAGC  Raphanus sativus var. oleiformis
FD935845       <-- TAGACTCGGTTGCGTCAGAGCCGTTTAACATCTCGGTGCTTCATATTAGC  Raphanus sativus var. oleiformis
FD566035       <-- .................GAGCCGTTTAACATCTCGGTGCTTCATATTAGC  Raphanus sativus var. oleiformis
EY920534       <-- ..........................................ATATTAGC  Raphanus raphanistrum subsp. landra
FD567408       <-- ..................................................  Raphanus sativus var. oleiformis
FD565651       <-- ..................................................  Raphanus sativus var. oleiformis
EY936593       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV535287       --> TAGAGTCGGTTGCGTCAGAGCCGTTTAACATCTCGGTGCTTCATATTAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541255       --> TAGAGTCGGTTGCGTCAGAGCCGTTTAACATCTCGGTGCTTCATATTAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD990193       --> TAGAGTCGGTTGCGTCGGAGCCGTTTAACATCTCGGTGCTTCATATTAGC  Raphanus raphanistrum subsp. landra
EV566108       --> TAGAGTCGGTTGCGTCAGAGCCGTTTAACATCTCGGTGCTTCATATTAGC  Raphanus raphanistrum subsp. landra
EW733179       --> TAGAGTCGGTTGCGTCGGAGCCGTTTAACATCTCGGTGCTTCATATTAGC  Raphanus sativus cv Rat-Tail Radish #3870
EX754491       --> TAGAGTCGGTTGCGTCAGAGCCGTTTAACATCTCGGTGCTTCATATTAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY924947       --> TAGAGTCGGTTGCGTCAGAGCCGTTTAACATCTCGGTGCTTCATATTAGC  Raphanus raphanistrum subsp. landra
EY940906       --> TAGAGTCGGTTGCGTCGGAGTCGTTTAACATCTCGGTGCTTCATATTAGC  Raphanus sativus cv Early Scarlet Globe
FD540909       --> TAGAGTCGGTTGCGTCAGAGCCGTTTAACATCTCGGTGCTTCATATTAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD561502       --> TAGACTCGGTTGCGTCAGAGCCGTTTAACATCTCGGTGCTTCATATTAGC  Raphanus sativus var. oleiformis
FD989294       --> TAGAGTCGGTTGCGTCGGAGCCGTTTAACATCTCGGTGCTTCATATTAGC  Raphanus raphanistrum subsp. landra
EX755604       --> TAGAGTCGGTTGCGTCAGAGCCGTTTAACATCTCGGTGCTTCATATTAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933658       --> TAGAGTCGGTTGCGTCGGAGCCGTTTAACATCTCGGTGCTTCATATTAGC  Raphanus sativus var. oleiformis
EY906349       --> TAGAGTCGGTTGCGTCAGAGCCGTTTAACATCTCGGTGCTTCATATTAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX888641       --> TAGAGTCGGTTGCGTCGGAGCCGTTTAACATCTCGGTGCTTCATATTAGC  Raphanus sativus var. oleiformis

               551    -    601
UN16204        --> ACTTCTATACCTATAATGGATCCTAATAATTCTGATTTTATTTATACATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY929074       <-- ACTTCTATACCTATAATGGATCCTAATAATTCTGATTTTATTTATACATC  Raphanus sativus var. oleiformis
EX898501       <-- ACTTCTATACCTATAATGGATCCTAATAATTCTGATTTTATTTATACATC  Raphanus sativus cv Early Scarlet Globe
EV571314       <-- ACTTCTATACCTATAATGGATCCTAGTAATTTTGATTTTGTTTATACATC  Raphanus raphanistrum subsp. landra
EY928955       <-- ACTTCTATACCTATAATGGATCCTAATAATTCTGATTTTATTTATACATC  Raphanus sativus var. oleiformis
EW730503       <-- ACTTCTATACCTATAATGGATCCTAATAATTCTGATTTTATTTATACATC  Raphanus sativus cv Early Scarlet Globe
EX898770       <-- GCTTCTATACCTATAATGGATCCTAATAATTCTGATTTTATTTATACATC  Raphanus sativus cv Early Scarlet Globe
EV540008       <-- ACTTCTATACCTATAATGGATCCTAATAATTCTGATTTTGTTTATACATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX892541       <-- ACTTCTATACCTATAATGGATCCTAATAATTCTGATTTTATTTATACATC  Raphanus sativus var. oleiformis
FD537316       <-- ACTTCTATACCTATAATGGATCCTAATAATTCTGATTTTGTTTATACATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537577       <-- ACTTCTATACCTATAATGGATCCTAATAATTCTGATTTTGTTTATACATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX758806       <-- ACTTCTATACCTATAATGGATCCTAATAATTCTGATTTTGTTTATACATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY927316       <-- ACTTCTATACCTATAATGGATCCTAATAATTCTGATTTTATTTATACATC  Raphanus sativus var. oleiformis
EY926971       <-- ACTTCTATACCTATAATGGATCCTAATAATTCTGATTTTATTTATACTTC  Raphanus sativus var. oleiformis
FD935845       <-- ACTTCTATACCTATAATGGATCCTAATAAT-CTGATTTTATTTATACTTC  Raphanus sativus var. oleiformis
FD566035       <-- ACTTCTATACCTATAATGGATCCTAATAATTCTGATTTTATTTATACATC  Raphanus sativus var. oleiformis
EY920534       <-- ACTTCTATACCTATAATGGATCCTAGTAATTCTGATTTTGTTTATACATC  Raphanus raphanistrum subsp. landra
FD567408       <-- ........................AATAATTCTGATTTTATTTATACATC  Raphanus sativus var. oleiformis
FD565651       <-- ..................................................  Raphanus sativus var. oleiformis
EY936593       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV535287       --> ACTTCTATACCTATAATGGATCCTAATAATTCTGATTTTGTTTATACATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541255       --> ACTTCTATACCTATAATGGATCCTAATAATTCTGATTTTGTTTATACATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD990193       --> ACTTCTATACCTATAATGGATCCTAATAATTCTGATTTTATTTATACATC  Raphanus raphanistrum subsp. landra
EV566108       --> ACTTCTATACCTATAATGGATCCTAGTAATTTTGATTTTGTTTATACATC  Raphanus raphanistrum subsp. landra
EW733179       --> ACTTCTATACCTATAATGGATCCTAATAATTCTGATTTTATTTATACATC  Raphanus sativus cv Rat-Tail Radish #3870
EX754491       --> ACTTCTATACCTATAATGGATCCTAATAATTCTGATTTTGTTTATACATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY924947       --> ACTTCTATACCTATAATGGATCCTAGTAATTCTGATTTTGTTTATACATC  Raphanus raphanistrum subsp. landra
EY940906       --> ACTTCTATACCTATAATGGATCCTAATAATTCTGATTTTATTTATACATC  Raphanus sativus cv Early Scarlet Globe
FD540909       --> ACTTCTATACCTATAATGGATCCTAATAATTCTGATTTTGTTTATACATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD561502       --> ACTTCTATACCTATAATGGATCCTAATAATTCTGATTTTATTTATACTTC  Raphanus sativus var. oleiformis
FD989294       --> ACTTCTATACCTATAATGGATCCTAATAATTCTGATTTTATTTATACATC  Raphanus raphanistrum subsp. landra
EX755604       --> ACTTCTATACCTATAATGGATCCTAATAATTCTGATTTTGTTTATACATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933658       --> ACTTCTATACCTATAATGGATCCTAATAATTCTGATTTTATTTATACATC  Raphanus sativus var. oleiformis
EY906349       --> ACTTCTATACCTATAATGGATCCTAATAATTCTGATTTTGTTTATACATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX888641       --> ACTTCTATACCTATAATGGATCCTAATAATTCTGATTTTATTTATACATC  Raphanus sativus var. oleiformis

               601    -    651
UN16204        --> ATCTTCACCACTTCCTGCACAAGCTCCTAACGATGATGATTATGAGTATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY929074       <-- ATCTTCGCCACTTCCTGCACAAGCTCCTAACGATGATGATTATGAGTATG  Raphanus sativus var. oleiformis
EX898501       <-- ATCTTCGCCACTTCCTGCACAAGCTCCTAACGATGATGATTATGAGTATG  Raphanus sativus cv Early Scarlet Globe
EV571314       <-- ATCTTCACCACTTCCTGCACAAGCTCCTAACGATGATGATTATGAGTATG  Raphanus raphanistrum subsp. landra
EY928955       <-- ATCTTCGCCACTTCCTGCACAAGCTCCTAACGATGATGATTATGAGTATG  Raphanus sativus var. oleiformis
EW730503       <-- ATCTTCGCCACTTCCTGCACAAGCTCCTAACGATGATGATTATGAGTATG  Raphanus sativus cv Early Scarlet Globe
EX898770       <-- ATCTTCGCCACTTCCTGCACAAGCTCCTAACGATGATGATTATGAGTATG  Raphanus sativus cv Early Scarlet Globe
EV540008       <-- ATCTTCACCACTTCCTGCACAAGCTCCTAACGATGATGATTATGAGTATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX892541       <-- ATCTTCGCCACTTCCTGCACAAGCTCCTAACGATGATGATTATGAGTATG  Raphanus sativus var. oleiformis
FD537316       <-- ATCTTCACCACTTCCTGCACAAGCTCCTAACGATGATGATTATGAGTATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537577       <-- ATCTTCACCACTTCCTGCACAAGCTCCTAACGATGATGATTATGAGTATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX758806       <-- ATCTTCACCACTTCCTGCACAAGCTCCTAACGATGATGATTATGAGTATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY927316       <-- ATCTTCGCCACTTCCTGCACAAGCTCCTAACGATGATGATTATGAGTATG  Raphanus sativus var. oleiformis
EY926971       <-- ATCTTCACCACTTCCTGCACAAGCTCCTAACGATGATGATTATGAGTATG  Raphanus sativus var. oleiformis
FD935845       <-- ATCTTCACCACTTCCTGCACAAGCTCCTAACGATGATGATTATGAGTATG  Raphanus sativus var. oleiformis
FD566035       <-- ATCTTCGCCACTTCCTGCACAAGCTCCTAACGATGATGATTATGAGTATG  Raphanus sativus var. oleiformis
EY920534       <-- ATCTTCACCACTTCCTGCACAAGCTCCTAACGATGATGATTATGAGTATG  Raphanus raphanistrum subsp. landra
FD567408       <-- ATCTTCGCCACTTCTTGCACAAGCTCCTAACGATGATGATTATGAGTATG  Raphanus sativus var. oleiformis
FD565651       <-- ..................................................  Raphanus sativus var. oleiformis
EY936593       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV535287       --> ATCTTCACCACTTCCTGCACAAGCTCCTAACGATGATGATTATGAGTATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541255       --> ATCTTCACCACTTCCTGCACAAGCTCCTAACGATGATGATTATGAGTATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD990193       --> ATCTTCACCACTTCCTGCACAAGCTCCTAACGATGATGATTATGAGTATG  Raphanus raphanistrum subsp. landra
EV566108       --> ATCTTCACCACTTCCTGCACAAGCTCCTAACGATGATGATTATGAGTATG  Raphanus raphanistrum subsp. landra
EW733179       --> ATCTTCACCACTTCCTGCACAAGCTCCTAACGATGATGATTATGAGTATG  Raphanus sativus cv Rat-Tail Radish #3870
EX754491       --> ATCTTCACCACTTCCTGCACAAGCTCCTAACGATGATGATTATGAGTATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY924947       --> ATCTTCACCACTTCCTGCACAAGCTCCTAACGATGATGATTATGAGTATG  Raphanus raphanistrum subsp. landra
EY940906       --> ATCTTCTCCACTTCCTGCACAAGCTCCTAACGATGATGATTATGAGCATG  Raphanus sativus cv Early Scarlet Globe
FD540909       --> ATCTTCACCACTTCCTGCACAAGCTCCTAACGATGATGATTATGAGTATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD561502       --> ATCTTCACCACTTCCTGCACAAGCTCCTAACGATGATGATTATGAGTATG  Raphanus sativus var. oleiformis
FD989294       --> ATCTTCACCACTTCCTGCACAAGCTCCTAACGATGATGATTATGAGTATG  Raphanus raphanistrum subsp. landra
EX755604       --> ATCTTCACCACTTCCTGCACAAGCTCCTAACGATGATGATTATGAGTATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933658       --> ATCTTCGCCACTTCCTGCACAAGCTCCTAACGATGATGATTATGAGTATG  Raphanus sativus var. oleiformis
EY906349       --> ATCTTCACCACTTCCTGCACAAGCTCCTAACGATGATGATTATGAGTATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX888641       --> ATCTTCGCCACTTCCTGCACAAGCTCCTAACGATGATGATTATGAGTATG  Raphanus sativus var. oleiformis

               651    -    701
UN16204        --> ACGAGCCACCATCCCCACCATCATCCTCTGCTAAGGCTAAGGCTCATGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY929074       <-- ACGAGCCACCATCCCCACCATCATCCTCTGCTAAGGCTAAGGCTCATGCT
EX898501       <-- ACGAGCCACCATCCCCACCATCATCCTTTGCTAAGGCTAAGGCTCATGCT
EV571314       <-- ACGAGCCACCATCCCCACCATCATCCTCTGCTAAGGCTAAGGCTCATGCT
EY928955       <-- ACGAGCCACCATCCCCACCATCATCCTTTGCTAAGGCTAAGGCTCATGCT
EW730503       <-- ACGAGCCACCATCCCCACCATCATCCTCTGCTAAGGCTAAGGCTCATGCT
EX898770       <-- ACGAGCCACCATCCCCACCATCATCCTCTGCTAAGGCTAAGGCTCATGCT
EV540008       <-- ACGAGCCGCCATCCCCACCATCATCCTCTGCTAAGGCTAAGGCTCATGCT
EX892541       <-- ACGAGCCACCATCCCCACCATCATCCTCTGCTAAGGCTAAGGCTCATGCT
FD537316       <-- ACGAGCCACCATCCCCACCATCATCCTCTGCTAAGGCTAAGGCTCATGCT
FD537577       <-- ACGAGCCACCATCCCCACCATCATCCTCTGCTAAGGCTAAGGCTCATGCT
EX758806       <-- ACGAGCCACCATCCCCACCATCATCCTCTGCTAAGGCTAAGGCTCATGCT
EY927316       <-- ACGAGCCACCATCCCCACCATCATCCTCTGCTAAGGCTAAGGCTCATGCT
EY926971       <-- ACGAGCCACCATCCCCACCATCATCCTCTGCTAAGGCTAAGGCTCATGCT
FD935845       <-- ACGAGCCACCATCCCCACCATCATCCTCTGCTAAGGCTAAGGCTCATGCT
FD566035       <-- ACGAGCCACCATCCCCACCATCATCCTTTGCTAAGGCTAAGGCTCATGCT
EY920534       <-- ACGAGCCACCATCCCCACCATCATCCTCTGCTAAGGCTAAGGCTCATGCT
FD567408       <-- ACGAGCCACCATCCCCACCATCATCCTCTGCTAAGGCTAAGGCTCATGCT
FD565651       <-- .......ACCATCCCCACCATCATCCTCTGCTAAGGCTAAGGCTCATGCT
EY936593       <-- ..................................................
EV535287       --> ACGAGCCGCCATCCCCACCATCATCCTCTGCTAAGGCTAACGCTCATGCT
FD541255       --> ACGAGCCACCATCCCCACCATCATCCTCTGCTAAG-CTAAG-CTCATGCT
FD990193       --> ACGAGCCACCATCCCCAC................................
EV566108       --> ACGAGCCACCATCCCCACCATCATCCTCTGCTAAGGCTA...........
EW733179       --> ACGAGCCACCATCCCCAC................................
EX754491       --> ACGAGCCACCATCCCCACCATCATCCTCTGCTAAG-CTAAGct.......
EY924947       --> ACGAGCCACCATCCCCAC................................
EY940906       --> ACGAGCCACCATCCCCACCATCATCCTCT.....................
FD540909       --> ACGAGCCACCATCCCCAC................................
FD561502       --> ACGAGCCACCATCCCCACCATCATCCTCTG....................
FD989294       --> ACGAGCCACCATCCCCACCATCATCCTCT.....................
EX755604       --> ACGAGCCACCATCCCCACCATCATCCTCTGCTAAG-CTAAG-CTCATGCT
EY933658       --> ACGAGCCACCATCCCCACCATCATCCTCTGCTAAGGCTAAGGCTCATGCT
EY906349       --> ACGAGCCACCATCCCCACCATCATCCTCTGCTAAGGCTAAGGCTCATGCT
EX888641       --> ACGAGCCACCATCCCCACCATCATCCTCTGCTAAGGCTAAGGCTCATGCT

               701    -    751
UN16204        --> CCTGCTGCTGCTAAGGCTGCTGATACTGCTCCTACGGCGTCTTCTAGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY929074       <-- CCTGCTGCTGCTAAGGCTGCTGATACTGCTCCTACGGCGTCTTCTAGCAA
EX898501       <-- CCTGCTGCTGCTAAGGCTGCTGATACTGCTCCTACGGCGTCTTCTAGCAA
EV571314       <-- CCTGCTGCTGCTAAGGCTGCTGATACTGCTCCTACGGCGTCTTCTAGCAA
EY928955       <-- CCTGCTGCTGCTAAGGCTGCTGATACTGCTCCTACGGCGTCTTCTAGCAA
EW730503       <-- CCTGCTGCTGCTAAGGCTGCTGATACTGCTCCTACGGCGTCTTCTAGCAA
EX898770       <-- CCTGCTGCTGCTAAGGCTGCTGATATTGCTCCTACGGCGTCTTCTAGCAA
EV540008       <-- CCTGCTGCTGCTAAGGCTGCTGATACTGCTCCTACGGCGTCTTCTAGCAA
EX892541       <-- CCTGCTGCTGCTAAGGCTGCTGATACTGCTCCTACGGCGTCTTCTAGCAA
FD537316       <-- CCTGCTGCTGCTAAGGCTGCTGATACTGCTCCTACGGCGTCTTCTAGCAA
FD537577       <-- CCTGCTGCTGCTAAGGCTGCTGATACTGCTCCTACGGCGTCTTCTAGCAA
EX758806       <-- CCTGCTGCTGCTAAGGCTGCTGATACTGCTCCTACGGCGTCTTCTAGCAA
EY927316       <-- CCTGCTGCTGCTAAGGCTGCTGATACTGCTCCTACGGCGTCTTCTAGCAA
EY926971       <-- CCTGCTGCTGCTAAGGCTGCTGATACTGCTCCTACGGCGTCTTCTAGCAA
FD935845       <-- CCTGCTGCTGCTAAGGCTGCTGATACTGCTCCTACGGCGTCTTCTAGCAA
FD566035       <-- CCTGCTGCTGCTAAGGCTGCTGATACTGCTCCTACGGCGTTTTCTAGCAA
EY920534       <-- CCTGCTGCTGCTAAGGCTGCTGATACTGCTCCTACGGCGTCTTCTAGCAA
FD567408       <-- CCTGCTGCTGCTAAGGCTGCTGATACTGCTCCTACGGCGTCTTCTAGCAA
FD565651       <-- CCTGCTGCTGCTAAGGCTGCTGATACTGCTCCTACGGCGTCTTCTAGCAA
EY936593       <-- ...................................GGCGTCTTCTAGCAA
EV535287       --> CCTGCTGCT.........................................
FD541255       --> CCTGCT............................................
FD990193       --> ..................................................
EV566108       --> ..................................................
EW733179       --> ..................................................
EX754491       --> ..................................................
EY924947       --> ..................................................
EY940906       --> ..................................................
FD540909       --> ..................................................
FD561502       --> ..................................................
FD989294       --> ..................................................
EX755604       --> CCTGCTGCTGCTAAG-CTGCTGATACTGCTCCTACG-CGTCTTCTAGCAA
EY933658       --> CCTGCTGCTG........................................
EY906349       --> CCTGCTGCTGCTAAGGCTGCTGATACTGCTCCTACGGCGTCTTCTAGCAA
EX888641       --> CCTGCTGCTGCTAAGGCTGCTGATACTGCTCCTACGGCGTCTTCTAGCAA

               751    -    801
UN16204        --> AGCCAACTCAACAAGTTCAGCTTCGGTTATCAATTCTTCTCAGCTTGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY929074       <-- AGCCAACTCAACAAGTTCAGCTTCGGTTATCAATTCTTCTTAGCTTGACT  Raphanus sativus var. oleiformis
EX898501       <-- AGCCAACTCAACAAGTTCAGCTTCGGTTATCAATTCTTCTCAGCTTGACT  Raphanus sativus cv Early Scarlet Globe
EV571314       <-- AGCCAACTCAACAAGTTCAGCTTCGGTTATTAATTCTTCTCAGCTTGACT  Raphanus raphanistrum subsp. landra
EY928955       <-- AGCCAACTCAACAAGTTCAGCTTCGGTTATCAATTCTTCTCAGCTTGACT  Raphanus sativus var. oleiformis
EW730503       <-- AGCCAACTCAACAAGTTCAGCTTCGGTTATCAATTCTTCTCAGCTTGACT  Raphanus sativus cv Early Scarlet Globe
EX898770       <-- AGCCAACTCAACAAGTTCAGCTTCGGTTATCAATTCTTTTCAGCTTGACT  Raphanus sativus cv Early Scarlet Globe
EV540008       <-- AGCCAACTCAACAAGTTCAGCTTCAGTTATTAATTCTTCTCAGCTTGGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX892541       <-- AGCCAACTCAACAAGTTCAGCTTCGGTTATCAATTCTTCTCAGCTTGACT  Raphanus sativus var. oleiformis
FD537316       <-- AGCCAACTCAACAAGTTCAGCTTCAGTTATTAATTCTTCTCAGCTTGGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537577       <-- AGCCAACTCAACAAGTTCAGCTTCAGTTATTAATTCTTCTCAGCTTGGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX758806       <-- AGCCAACTCAACAAGTTCAGCTTCAGTTATTAATTCTTCTCAGCTTGGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY927316       <-- AGCCAACTCAACAAGTTCAGCTTCGGTTATCAATTCTTCTCAGCTTGACT  Raphanus sativus var. oleiformis
EY926971       <-- AGACAACTCAACAAGTTCAGCTTCGGTTATTAATTCTTCTCAGCTTGACT  Raphanus sativus var. oleiformis
FD935845       <-- AGACAACTCAACAAGTTCAGCTTCGGTTATTAATTCTTCTCAGCTTGACT  Raphanus sativus var. oleiformis
FD566035       <-- AGCCAACTCAACAAGTTCAGCTTCGGTTATCAATTCTTTTCAGCTTGACT  Raphanus sativus var. oleiformis
EY920534       <-- AGCCAACTCAACAAGTTCAGCTTCGGTTATTAATTCTTTTCAGCTTGACT  Raphanus raphanistrum subsp. landra
FD567408       <-- AGCCAACTCAACAAGTTCAGCTTCGGTTATCAATTCTTCTCAGCTTGACT  Raphanus sativus var. oleiformis
FD565651       <-- AGACAACTCAACAAGTTCAGCTTCGGTTATTAATTCTTCTCAGCTTGACT  Raphanus sativus var. oleiformis
EY936593       <-- AGCCAACTCAACAAGTTCAGCTTCGGTTATCAATTCTTCTCAGCTTGACT  Raphanus sativus cv Early Scarlet Globe
EV535287       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541255       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD990193       --> ..................................................  Raphanus raphanistrum subsp. landra
EV566108       --> ..................................................  Raphanus raphanistrum subsp. landra
EW733179       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX754491       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY924947       --> ..................................................  Raphanus raphanistrum subsp. landra
EY940906       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD540909       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD561502       --> ..................................................  Raphanus sativus var. oleiformis
FD989294       --> ..................................................  Raphanus raphanistrum subsp. landra
EX755604       --> AGCCActcaca.......................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933658       --> ..................................................  Raphanus sativus var. oleiformis
EY906349       --> AGCCAACTCAACAAGTTCAGCTTCAGTTATTAATTCTTCTCAGCTTGGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX888641       --> AGCCAACTCAACAAGTTCAGCTTCGGTTATCAATTCTTCTCAGCTTGACT  Raphanus sativus var. oleiformis

               801    -    851
UN16204        --> TGGCGTTTGCGGTCGTGATTTCATCCTTCTGGTTGTTCATGACGGTCTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY929074       <-- TGGCGTTTGCGGTCGTGATTTCATCCTTCTGGTTGTTCATGACGGTCTAG  Raphanus sativus var. oleiformis
EX898501       <-- TGGCGTTTGCGGTCGTGATTTCATCCTTCTGGTTGTTCATGACGGTCTAG  Raphanus sativus cv Early Scarlet Globe
EV571314       <-- TGGCTTTTGCGGTCGTGATTTCATCCTTCTGGTTGTTCATGACGGTCTAG  Raphanus raphanistrum subsp. landra
EY928955       <-- TGGCGTTTGCGGTCGTGATTTCATCCTTCTGGTTGTTCATGACGGTCTAG  Raphanus sativus var. oleiformis
EW730503       <-- TGGCGTTTGCGGTCGTGATTTCATCCTTCTGGTTGTTCATGACGGTCTAG  Raphanus sativus cv Early Scarlet Globe
EX898770       <-- TGGCGTTTGCGGTCGTGATTTCATCCTTCTGGTTGTTCATGACGGTCTAG  Raphanus sativus cv Early Scarlet Globe
EV540008       <-- TGGCGTTTGCGGTCGTGATGTCATCCTTCTGGCTGTTCATGACGGTCTAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX892541       <-- TGGCGTTTGCGGTCGTGATTTCATCCTTCTGGTTGTTCATGACGGTCTAG  Raphanus sativus var. oleiformis
FD537316       <-- TGGCGTTTGCGGTCGTGATGTCATCCTTCTGGCTGTTCATGACGGTCTAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537577       <-- TGGCGTTTGCGGTCGTAATGTCATCCTTCTGGCTGTTCATGACGGTCTAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX758806       <-- TGGCGTTTGCGGTCGTGATGTCATCCTTCTGGCTGTTCATGACGGTCTAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY927316       <-- TGGCGTTTGCGGTCGTGATTTCATCCTTCTGGTTGTTCATGACGGTCTAG  Raphanus sativus var. oleiformis
EY926971       <-- TGGCGTTTGCGGTCGTGATTTCATCCTTCTGGTTGTTCATGACGGTCTAG  Raphanus sativus var. oleiformis
FD935845       <-- TGGCGTTTGCGGTCGTGATTTCATCCTTCTGGTTGTTCATGACGGTCTAG  Raphanus sativus var. oleiformis
FD566035       <-- TGGCGTTTGCGGTCGTGATTTCATCCTTCTGGTTGTTCATGACGGTTTAG  Raphanus sativus var. oleiformis
EY920534       <-- TGGCGTTTGCGGTCGTGATTTCATCCTTCTGGTTGTTCATGACGGTCTAG  Raphanus raphanistrum subsp. landra
FD567408       <-- TGGCGTTTGCGGTCGTGATTTCATCCTTCTGGTTGTTCATGACGGTCTAG  Raphanus sativus var. oleiformis
FD565651       <-- TGGCGTTTGCGGTCGTGATTTCATCCTTCTGGTTGTTCATGACGGTCTAG  Raphanus sativus var. oleiformis
EY936593       <-- TGGCGTTTGTGGTCGTGATTTCATCCTTCTGGTTGTTCATGACGGTCTAG  Raphanus sativus cv Early Scarlet Globe
EV535287       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541255       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD990193       --> ..................................................  Raphanus raphanistrum subsp. landra
EV566108       --> ..................................................  Raphanus raphanistrum subsp. landra
EW733179       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX754491       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY924947       --> ..................................................  Raphanus raphanistrum subsp. landra
EY940906       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD540909       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD561502       --> ..................................................  Raphanus sativus var. oleiformis
FD989294       --> ..................................................  Raphanus raphanistrum subsp. landra
EX755604       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933658       --> ..................................................  Raphanus sativus var. oleiformis
EY906349       --> TGGCGTTTGCGGTCGTGATGTCATCCTTCTGGCTGTTCATGA........  Raphanus raphanistrum subsp. raphanistrum (MS)
EX888641       --> TGGCGTTTGCGGTCGTGATTTCATCCTTCTGGTTGTTCATGACGGTCTAG  Raphanus sativus var. oleiformis

               851    -    901
UN16204        --> TGAGATGGTGGTGTTAAGAGTTGATAACAGCGTGAAAGAATGAAAAAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY929074       <-- TGAGATGGTGGTGTTAAGAGTTGATAACAGCGTGAAAGAATGAAAAAGAT
EX898501       <-- TGAGATGGTGGTGTTAAGAGTTGATAACAGCGTGAAAGAATGAAAAAGAT
EV571314       <-- TTAGATGGTGGTGTTAAGAGTTGATAACAGCGTGAAAGAATGAAAAAGAT
EY928955       <-- TGAGATGGTGGTGTTAAGAGTTGATAACAGCGTGAAAGAATGAAAAAGAT
EW730503       <-- TGAGATGGTGGTGTTAAGAGTTGATAACAGCGTGAAAGAATGAAAAAGAT
EX898770       <-- TGAGATGGTGGTGTTAAGAGTTGATAACAGCGTGAAAGAATGAAAAAGAT
EV540008       <-- TGAGATGGTGGTGTTAAGAGTTGATAACAGCGTGAAAGAATGAAAAAGAT
EX892541       <-- TGAGATGGTGGTGTTAAGAGTTGATAACAGCGTGAAAGAATGAAAAAGAT
FD537316       <-- TGAGATGGTGGTGTTAAGAGTTGATAACAGCGTGAAAGAATGAAAAAGAT
FD537577       <-- TGAGATGGTGGTGTTAAGAGTTGATAACAGCGTGAAAGAATGAAAAAGAT
EX758806       <-- TGAGATGGTGGTGTTAAGAGTTGATAACAGCGTGAAAGAATGAAAAAGAT
EY927316       <-- TGAGATGGTGGTGTTAAGAGTTGATAACAGCGTGAAAGAATGAAAAAGAT
EY926971       <-- TGAGATGGTGGTGTTAAGAGTTGATAACAGCGTGAAAGAATGAAAAAGAT
FD935845       <-- TGAGATGGTGGTGTTAAGAGTTGATAACAGCGTGAAAGAATGAAAAAGAT
FD566035       <-- TGAGATGGTGGTGTTAAGAGTTGATAACAGCGTGAAAGAATGAAAAAGAT
EY920534       <-- TGAGATGGTGGTGTTAAGAGTTGATAACAGCGTGAAAGAATGAAAAAGAT
FD567408       <-- TGAGATGGTGGTGTTAAGAGTTGATAACAGCGTGAAAGAATGAAAAAGAT
FD565651       <-- TGAGATGGTGGTGTTAAGAGTTGATAACAGCGTGAAAGAATGAAAAAGAT
EY936593       <-- TGAGATGGTGGTGTTAAGAGTTGATAACAGCGTGAAAGAATGAAAAAGAT
EV535287       --> ..................................................
FD541255       --> ..................................................
FD990193       --> ..................................................
EV566108       --> ..................................................
EW733179       --> ..................................................
EX754491       --> ..................................................
EY924947       --> ..................................................
EY940906       --> ..................................................
FD540909       --> ..................................................
FD561502       --> ..................................................
FD989294       --> ..................................................
EX755604       --> ..................................................
EY933658       --> ..................................................
EY906349       --> ..................................................
EX888641       --> TGAGATGGTGGTGTTAAGAGTTGATAACAGCGTGAAAGAATGAAAAAGAT

               901    -    951
UN16204        --> CAAGTGAGCTTTTTT-GAGACCAAGAAAATAAAAGAAGATTGGCAGGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY929074       <-- CAAGTGAGCTTTTTT-GAGACCAAGAAAATAAAAGAAGATTGGCAGGGAA
EX898501       <-- CAAGTGAGCTTTTTT-GAGACCAAGAAAATAAAAGAAGATTGGCAGGGAA
EV571314       <-- CAGATGAGCTTTTTT-GAGACCAAGAAAATAAAAGAAGATTGGCAGGGAA
EY928955       <-- CAAGTGAGCTTTTTT-GAGACCAAGAAAATAAAAGAAGATTGGCAGGGAA
EW730503       <-- CAAGTGAGCTTTTTT-GAGACCAAGAAAATAAAAGAAGATTGGCAGGGAA
EX898770       <-- CAAGTGAGCTTTTTT-GAGACCAAGAAAATAAAAGAAGATTGGCAGGGAA
EV540008       <-- CAAGTGAGCTTTTTT-GAGACCAAGAAAATAAAAGAAGATTGGCAGGGAA
EX892541       <-- CAAGTGAGCTTTTTT-GAGACCAAGAAAATAAAAGAAGATTGGCAGGGAA
FD537316       <-- CAAGTGAGCTTTTTT-GAGACCAAGAAAATAAAAGAAGATTGGCAGGGAA
FD537577       <-- CAAGTGAGCTTTTTT-GAGACCAAGAAAATAAAAGAAGATTGGCAGGGAA
EX758806       <-- CAAGTGAGCTTTTTT-GAGACCAAGAAAATAAAAGAAGATTGACAGGGAA
EY927316       <-- CAAGTGAGCTTTTTT-GAGACCAAGAAAATAAAAGAAGATTGGCAGGGAA
EY926971       <-- CAAGTGAGCTTTTTT-GAGACCAAGAAAATAAAAGAAGATTGGCAGGGAA
FD935845       <-- CAAGTGAGCTTTTTT-GAGACCAAGAAAATAAAAGAAGATTGGCAGGGAA
FD566035       <-- CAAGTGAGCTTTTTT-GAGACCAAGAAAATAAAAGAAGATTGGCAGGGAA
EY920534       <-- CAGATGAGTTTTTTT-GAGACCAAGAAAATAAAAGAAGATTGGCAGGGAA
FD567408       <-- CAAGTGAGCTTTTTT-GAGACCAAGAAAATAAAAGAAGATTGGCAGGGAA
FD565651       <-- CAAGTGAGCTTTTTTTGAGACCAAGAAAATAAAAGAAGATTGGCAGGGAA
EY936593       <-- CAAGTGAGCTTTTTT-GAGACCAAGAAAATAAAAGAAGATTGGCAGGGAA
EV535287       --> ..................................................
FD541255       --> ..................................................
FD990193       --> ..................................................
EV566108       --> ..................................................
EW733179       --> ..................................................
EX754491       --> ..................................................
EY924947       --> ..................................................
EY940906       --> ..................................................
FD540909       --> ..................................................
FD561502       --> ..................................................
FD989294       --> ..................................................
EX755604       --> ..................................................
EY933658       --> ..................................................
EY906349       --> ..................................................
EX888641       --> CAAGTGAGCTTTTTT-GAGACCAAGAAAATAAAAGAAGATTGGCAGGGAA

               951    -   1001
UN16204        --> AAGAGTTCAAGTTTTTCACCCAAAACACTAAAGAAG-AGCAAACTTGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY929074       <-- ATGAGTTCAAGTTTTTCACCCAAAACACTAAAGAAG-AGCAAACTTGGAT  Raphanus sativus var. oleiformis
EX898501       <-- AAGAGTTCAAGTTTTTCACCCAAAACACTAAAGAAG-AGCAAACTTGGAT  Raphanus sativus cv Early Scarlet Globe
EV571314       <-- AAGAGTTCAAGTTTTTCACCCAAAACACTAAAGAAGGAGCAAACTTGGAT  Raphanus raphanistrum subsp. landra
EY928955       <-- AAGAGTTCAAGTTTTTCACCCAAAGCACTAAAGAAG-AGCAAACTTGGAT  Raphanus sativus var. oleiformis
EW730503       <-- AAGAGTTCAAGTTTTTCACCCAAAACACTAAAGAAG-AGCAAACTTGGAT  Raphanus sativus cv Early Scarlet Globe
EX898770       <-- AAGAGTTCAAGTTTTTCACCCAAAACACTAAAGAAG-AGCAAACTTGGAT  Raphanus sativus cv Early Scarlet Globe
EV540008       <-- AAGAGTTCAAGTTTTTCACCCAAAACACTAAAGAAGGTTCAAACTTGGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX892541       <-- AAGAGTTCAAGTTTTTCACCCAAAACGCTAAAGAAG-AGCAAACTTGGAT  Raphanus sativus var. oleiformis
FD537316       <-- AAGAGTTCAAGTTTTTCACCCAAAACACTAAAGAAGGTTCAAACTTGGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537577       <-- AAGAGTTCAAGTTTTTCACCCAAAACACTAAAGAAGGTTCAAACTTGGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX758806       <-- AAGAGTTCAAGTTTTTCACCCAAAACACTAAAGAAGGTTCAAACTTGGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY927316       <-- AAGAGTTCAAGTTTTTCACCCAAAACACTAAAGAAG-AGCAAACTTGGAT  Raphanus sativus var. oleiformis
EY926971       <-- AAGAGTTCAAGTTTTTCACCCAAAACACTAAAGAAG-AGCAAACTTGGAT  Raphanus sativus var. oleiformis
FD935845       <-- AAGAGTTCAAGTTTTTCACCCAAAACACTAAAGAAG-AGCAAACTTGGAT  Raphanus sativus var. oleiformis
FD566035       <-- AAGAGTTCAAGTTTTTCACCCAAAACACTAAAGAAG-AGCAAACTTGGAT  Raphanus sativus var. oleiformis
EY920534       <-- AAGAGTTCAAGTTTTTCACCCAAAACACTAAAGAAGGAGCAAACTTGGAT  Raphanus raphanistrum subsp. landra
FD567408       <-- AAGAGTTCAAGTTTTTCACCCAAAACACTAAAGAAG-AGCAAACTTGGAT  Raphanus sativus var. oleiformis
FD565651       <-- AAGAGTTCAAGTTTTTCACCCAAAACACTAAAGAAG-AGCAAACTTGGAT  Raphanus sativus var. oleiformis
EY936593       <-- AAGAGTTCAAGTTTTTCACCCAAAACACTAAAGAAG-AGCAAACTTGGAT  Raphanus sativus cv Early Scarlet Globe
EV535287       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541255       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD990193       --> ..................................................  Raphanus raphanistrum subsp. landra
EV566108       --> ..................................................  Raphanus raphanistrum subsp. landra
EW733179       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX754491       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY924947       --> ..................................................  Raphanus raphanistrum subsp. landra
EY940906       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD540909       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD561502       --> ..................................................  Raphanus sativus var. oleiformis
FD989294       --> ..................................................  Raphanus raphanistrum subsp. landra
EX755604       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933658       --> ..................................................  Raphanus sativus var. oleiformis
EY906349       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX888641       --> AAGAGTTCAAGTTTTTCACCCAAAACGCTAAAGAAG-AGCAAACTTGGAT  Raphanus sativus var. oleiformis

               1001   -   1051
UN16204        --> CACAAGAAGAAATAATGTGAATGCAATAAGGATCGAGAAAGTTGTAAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY929074       <-- CACAAGAAGAAATAATGTGAATGCAATAAGGATCGAGAAAGTTGTAAAAC  Raphanus sativus var. oleiformis
EX898501       <-- CACAAGAAGAAATAATGTGAATGCAATAAGGATCGAGAAAGTTGTAAAAC  Raphanus sativus cv Early Scarlet Globe
EV571314       <-- CACAAGAAGAAATAATGTGAATGCAATAAGGATGGAGAAAGTTGTAAAAC  Raphanus raphanistrum subsp. landra
EY928955       <-- CACAAGAAGAAATAATGTGAATGCAATAAGGATCGAGAAAGTTGTAAAAC  Raphanus sativus var. oleiformis
EW730503       <-- CACAAGAAGAAATAATGTGAATGCAATAAGGATCGAGAAAGTTGTAAAAC  Raphanus sativus cv Early Scarlet Globe
EX898770       <-- CACAAGAAGAAATAATGTGAATGCAATAAGGATCGAGAAAGTTGTAAAAC  Raphanus sativus cv Early Scarlet Globe
EV540008       <-- CACAATAAGAAATAATGTGAATGCAATAAGGATGGAGAAAGTTGTAAAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX892541       <-- CACAAGAAGAAATAATGTGAATGCAATAAGGATCGAGAAAGTTGTAAAAC  Raphanus sativus var. oleiformis
FD537316       <-- CACAAGAAGAAATAATGTGAATGCAATAAGGATGGAGAAAGTTGTAAAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537577       <-- CACAAGAAGAAATAATGTGAATGCAATAAGGATGGAGAAAGTTGTAAAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX758806       <-- CACAAGAAGAAATAATGTGAATGCAATAAGGATGGAGAAAGTTGTAAAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY927316       <-- CACAAGAAGAAATAATGTGAATGCAATAAGGATCGAGAAAGTTGTAAAAC  Raphanus sativus var. oleiformis
EY926971       <-- CACAAGAAGAAATAATGTGAATGCAATAAGGATCGAGAAAGTTGTAAAAC  Raphanus sativus var. oleiformis
FD935845       <-- CACAAGAAGAAATAATGTGAATGCAATAAGGATCGAGAAAGTTGTAAAAC  Raphanus sativus var. oleiformis
FD566035       <-- CACAAGAAGAAATAATGTGAATGCAATAAGGATCGAGAAAGTTGTAAAAC  Raphanus sativus var. oleiformis
EY920534       <-- CACAAGAAGAAATAATGTGAATGCAATAAGGATGGAGAAAGTTGTAAAAC  Raphanus raphanistrum subsp. landra
FD567408       <-- CACAAGAAGAAATAATGTGAATGCAATAAGGATCGAGAAAGTTGTAAAAC  Raphanus sativus var. oleiformis
FD565651       <-- CACAAGAAGAAATAATGTGAATGCAATAAGGATCGAGAAAGTTGTAAAAC  Raphanus sativus var. oleiformis
EY936593       <-- CACAAGAAGAAATAATGTGAATGCAATAAGGATCGAGAAAGTTGTAAAAC  Raphanus sativus cv Early Scarlet Globe
EV535287       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541255       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD990193       --> ..................................................  Raphanus raphanistrum subsp. landra
EV566108       --> ..................................................  Raphanus raphanistrum subsp. landra
EW733179       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX754491       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY924947       --> ..................................................  Raphanus raphanistrum subsp. landra
EY940906       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD540909       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD561502       --> ..................................................  Raphanus sativus var. oleiformis
FD989294       --> ..................................................  Raphanus raphanistrum subsp. landra
EX755604       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933658       --> ..................................................  Raphanus sativus var. oleiformis
EY906349       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX888641       --> CACAAGAAGAAATAATGTGA-TGCAATAAG-ATCGAGAAAGTTGTAAA-C  Raphanus sativus var. oleiformis

               1051   -   1101
UN16204        --> TCATAAACTCTTTATTTATTTGGAAGCTTGGAAATGATCTTTATTAAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY929074       <-- TCATAAACTCTTTATTTATTTGGAAGCTTGGAAATGATCTTTATTAAGTT  Raphanus sativus var. oleiformis
EX898501       <-- TCATAAACTCTTTATTTATTTGGAAGCTTGGAAATGATCTTTATTAAGTT  Raphanus sativus cv Early Scarlet Globe
EV571314       <-- TCATTAACTCTTTATTTATTTGGAAGCTTGGAAATGATCTTTATTAAGTT  Raphanus raphanistrum subsp. landra
EY928955       <-- TCATAAACTCTTTATTTATTTGGAAGCTTGGAAATGATCTTTATTAAGTT  Raphanus sativus var. oleiformis
EW730503       <-- TCATAAACTCTTTATTTATTTGGAAGCTTGGAAATGATCTTTATTAAGTT  Raphanus sativus cv Early Scarlet Globe
EX898770       <-- TCATAAACTCTTTATTTATTTGGAAGCTTGGAAATGATCTTTATTAAGTT  Raphanus sativus cv Early Scarlet Globe
EV540008       <-- TCATAAACTCTTTATTTATT-GGAAGCTTGGAAATGATCTTTATTAAGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX892541       <-- TCATAAACTCTTTATTTATTTGGAAGCTTGGAAATGATCTTTATTAAGTT  Raphanus sativus var. oleiformis
FD537316       <-- TCATAAACTCTTTATTTATT-GGAAGCTTGGAAATGATCTTTATTAAGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537577       <-- TCATAAACTCTTTATTTATT-GGAAGCTTGGAAATGATCTTTATTAAGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX758806       <-- TCATAAACTCTTTATTTATT-GGAAGCTTGGAAATGATCTTTATTAAGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY927316       <-- TCATAAACTCTTTATTTATTTGGAAGCTTGGAAATGATCTTTATTAAGTT  Raphanus sativus var. oleiformis
EY926971       <-- TCATAAACTCTTTATTTATTTGGAAGCTTGGAAATGATCTTTATTAAGTT  Raphanus sativus var. oleiformis
FD935845       <-- TCATAAACTCTTTATTTATTTGGAAGCTTGGAAATGATCTTTATTAAGTT  Raphanus sativus var. oleiformis
FD566035       <-- ACATAAACTCTTTATTTATTTGGAAGCTTGGAAATGATCTTTATTAAGTT  Raphanus sativus var. oleiformis
EY920534       <-- TCATTAACTCTTTATTTATTTGGAAGCTTGGAAATGATCTTTATTAAGTT  Raphanus raphanistrum subsp. landra
FD567408       <-- TCATAAACTCTTTATTTATTTGGAAGCTTGGAAATGATCTTTATTAAGTT  Raphanus sativus var. oleiformis
FD565651       <-- TCATAAACTCTTTATTTATTTGGAAGCTTGGAAATGATCTTTA.......  Raphanus sativus var. oleiformis
EY936593       <-- TCATAAACTCTTTATTTATTTGGAAGCTTGGAAATGATCTTTATTAAGTT  Raphanus sativus cv Early Scarlet Globe
EV535287       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541255       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD990193       --> ..................................................  Raphanus raphanistrum subsp. landra
EV566108       --> ..................................................  Raphanus raphanistrum subsp. landra
EW733179       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX754491       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY924947       --> ..................................................  Raphanus raphanistrum subsp. landra
EY940906       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD540909       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD561502       --> ..................................................  Raphanus sativus var. oleiformis
FD989294       --> ..................................................  Raphanus raphanistrum subsp. landra
EX755604       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933658       --> ..................................................  Raphanus sativus var. oleiformis
EY906349       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX888641       --> TCATAA-CTCTT-ATTTATTTGGA-GCT-GGAAATGATCTTTAT-AAGT-  Raphanus sativus var. oleiformis

               1101   -   1151
UN16204        --> GTGAAACATAATAATCGGTGCTTAGGCTTTTCTGACTAAATGGTGCATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY929074       <-- GTGAAACATAATAATCGGTGCTTAGGCTTTTCTGACT.............
EX898501       <-- GTGAAACATAATAATCGGTGCTTAGGCTTTTCTG................
EV571314       <-- GTGAAACATAATAATTGGTGCTTAGGCTTTTCTG................
EY928955       <-- GTGAAACATAATAATCGGTGCTTAGGCTTTTCTG................
EW730503       <-- GTGAAACATAATAATCGGTGCTTAGGCTTTTCTGACT.............
EX898770       <-- GTGAAACATAATAATCGGTGCTTAGGCTTTTCTGACTAAATGGTGCATTG
EV540008       <-- GTGAAACATAATAATCGGTGCTTAGGCTTTTCTGACTAAATGGTGCATTG
EX892541       <-- GTGAAACATAATAATCGGTGCTTAGGCTTTTCTGACc.............
FD537316       <-- GTGAAACATAATAATCGGTGCTTAGGCTTTTCTGACTAAATGGTGCATTG
FD537577       <-- GTGAAACATAATAATCGGTGCTTAGGCTTTTCTGACTAAATGGTGCATTG
EX758806       <-- GTGAAACATAATAATCGGTGCTTAGGCTTTTCT.................
EY927316       <-- GTGAAACATAATAATCGGTGCTTAGGCTTTTCTGACTAAATGGTGCATTG
EY926971       <-- GTGAAACATAATAATCGGTGCTTAGGCTTTTCTGACc.............
FD935845       <-- GTGAAACATAATAATCGGTGCTTAGGCTTTTCTGACTAg...........
FD566035       <-- GTGAAACATAATAATCGGTGCTTAGGCTTTTCTGACTAAATGGTGCATTG
EY920534       <-- GTGAAACATAATAATTGGTGCTTAGGCTTTTCTGACTAAATGGTGCATTG
FD567408       <-- GTGAAACATAATAATCGGTGCTTAGGCTTTTCTGACT.............
FD565651       <-- ..................................................
EY936593       <-- GTGAAACATAATAATCGGTACTTAGGCTTTTCTGACTAAATGGTGCATTG
EV535287       --> ..................................................
FD541255       --> ..................................................
FD990193       --> ..................................................
EV566108       --> ..................................................
EW733179       --> ..................................................
EX754491       --> ..................................................
EY924947       --> ..................................................
EY940906       --> ..................................................
FD540909       --> ..................................................
FD561502       --> ..................................................
FD989294       --> ..................................................
EX755604       --> ..................................................
EY933658       --> ..................................................
EY906349       --> ..................................................
EX888641       --> GTGAA-CATA-TA-TCGGTGCTTAG-CTTT-CTGAC..............

               1151   -   1201
UN16204        --> TTGTTTGGTTGCATTACAATGTTAATCAATGTTCCAAAACTAGGTCAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY929074       <-- ..................................................
EX898501       <-- ..................................................
EV571314       <-- ..................................................
EY928955       <-- ..................................................
EW730503       <-- ..................................................
EX898770       <-- TTGTTTGGTTGCATTACAATGTTAATCAATGTTCC...............
EV540008       <-- TTGTTTGGTTGCATTACAATGTTAATCAATATTCt...............
EX892541       <-- ..................................................
FD537316       <-- TTGTTTGGTTGCATTACAATGTTAATCAATATTCt...............
FD537577       <-- TTGTTTGGTTac......................................
EX758806       <-- ..................................................
EY927316       <-- TTGTTTGGTTGCATTACAATGTTAATCAATGTTCg...............
EY926971       <-- ..................................................
FD935845       <-- ..................................................
FD566035       <-- TTGTTTGGTTGCATTACAATGTTAATCAATGTTCt...............
EY920534       <-- TTGTTTGGTTGCATTACAATGTTAATCAATGTTCCAAAACTAGGTCAAGC
FD567408       <-- ..................................................
FD565651       <-- ..................................................
EY936593       <-- TTGTTTGGTTGCATTACAACGTTAATCAATGTTCC...............
EV535287       --> ..................................................
FD541255       --> ..................................................
FD990193       --> ..................................................
EV566108       --> ..................................................
EW733179       --> ..................................................
EX754491       --> ..................................................
EY924947       --> ..................................................
EY940906       --> ..................................................
FD540909       --> ..................................................
FD561502       --> ..................................................
FD989294       --> ..................................................
EX755604       --> ..................................................
EY933658       --> ..................................................
EY906349       --> ..................................................
EX888641       --> ..................................................

               1201   -   1251
UN16204        --> TTT
                   ~~~
EY929074       <-- ...
EX898501       <-- ...
EV571314       <-- ...
EY928955       <-- ...
EW730503       <-- ...
EX898770       <-- ...
EV540008       <-- ...
EX892541       <-- ...
FD537316       <-- ...
FD537577       <-- ...
EX758806       <-- ...
EY927316       <-- ...
EY926971       <-- ...
FD935845       <-- ...
FD566035       <-- ...
EY920534       <-- TTT
FD567408       <-- ...
FD565651       <-- ...
EY936593       <-- ...
EV535287       --> ...
FD541255       --> ...
FD990193       --> ...
EV566108       --> ...
EW733179       --> ...
EX754491       --> ...
EY924947       --> ...
EY940906       --> ...
FD540909       --> ...
FD561502       --> ...
FD989294       --> ...
EX755604       --> ...
EY933658       --> ...
EY906349       --> ...
EX888641       --> ...