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Alignment for radish unigene UN16210

               -2     -     48
UN16210        --> ...GGAAAGTAAAAACACAAAAGACAGAGATCTCAAAAACAAAGAAGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW729177       <-- ...GGAAAGTAAAAAAACAAAAGACAGAGATCTCAAAAACAAAGAAGAAA  Raphanus sativus cv Early Scarlet Globe
EX898813       <-- ggaaaAAAGTAAAAACACAAAAGACAGAGATCTCAAAAACAAAGAAGAAA  Raphanus sativus cv Early Scarlet Globe
EY919645       <-- ..ggaAAAGTAAAAAAACAAAAGACAGAGATCTCAAAAACAAAGAAGAAA  Raphanus raphanistrum subsp. landra
EV541290       <-- ....ggagGTAAAAACACGAAAGACAGAGATCTCAAAAACAAAGAAGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968989       <-- .......gGTAAAAACACAAAAGACAGAGATCTCAAAAACAAAGAAAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW727827       <-- ........ggAAAAACACAAAAGACAGAGATCTCAAAAACAAAGAAGAAA  Raphanus sativus cv Early Scarlet Globe
EW737286       <-- ........ggAAAAACACAAAAGACAGAGATCTCAAAAA-ACA-AAGAAA  Raphanus sativus cv Rat-Tail Radish #3870
EY909682       <-- .........gAAAAACACAAAAGACAGAGATCTCAAAAACAAAGAAGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD528700       <-- ........ggAAAAACACAAAAGACAGAGATCTCAAAAA-ACA-AAG-AA  Raphanus raphanistrum subsp. maritimus
FD545850       <-- ........ggAAAAACACAAAAGACAGAGATCTCAAAAACAAAGAAGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD567430       <-- ........ggAAAAACACAAAAGACAGAGATCTCAAAAACAAAGAAGCAA  Raphanus sativus var. oleiformis
FD530387       <-- .........ggAAAACACAAAAGACAGAGATCTCAAAAACAAAGAAGCAA  Raphanus raphanistrum subsp. maritimus
FD554225       <-- .................gAAAAGACAGAGATCTCAAAAACAAAGAAGAAA  Raphanus raphanistrum subsp. landra
FD943891       <-- ................ggAAAAGACAGAGATCTCAAAAACAAAGAAGAAA  Raphanus sativus cv Early Scarlet Globe
FD530326       <-- .............................................gcAAA  Raphanus raphanistrum subsp. maritimus
FD960797       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY917672       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY911423       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW724732       --> ...GGAAAGTAAAAAAACAAAAGACAGAGATCTCAAAAACAAAGAAGAAA  Raphanus sativus cv Early Scarlet Globe
EW724966       --> ...GGAAAGTAAAAACACAAAAGACAGAGATCTCAAAAACAAAGAAGAAA  Raphanus sativus cv Early Scarlet Globe
EX894500       --> ggaaaAAAGTAAAAACACAAAAGACAGAGATCTCAAAAACAAAGAAGAAA  Raphanus sativus cv Early Scarlet Globe
EY923912       --> ..ggaAAAGTAAAAAAACAAAAGACAGAGATCTCAAAAACAAAGAAGAAA  Raphanus raphanistrum subsp. landra
EV536950       --> ....ggagGTAAAAACACGAAAGACAGAGATCTCAAAAACAAAGAAGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973265       --> .......gGTAAAAACACAAAAGACAGAGATCTCAAAAACAAAGAAAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723021       --> ........ggAAAAACACAAAAGACAGAGATCTCAAAAACAAAGAAGAAA  Raphanus sativus cv Early Scarlet Globe
EW732608       --> ........ggAAAAACACAAAAGACAGAGATCTCAAAAA-ACA-AAGAAA  Raphanus sativus cv Rat-Tail Radish #3870
EY913457       --> .........gAAAAACACAAAAGACAGAGATCTCAAAAACAAAGAAGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY923901       --> ........ggAAAAACACAAAAGACAGAGATCTCAAAAACAAAGAAGCAA  Raphanus raphanistrum subsp. landra
FD532149       --> ........ggAAAAACACAAAAGACAGAGATCTCAAAAA-ACA-AAG-AA  Raphanus raphanistrum subsp. maritimus
FD549826       --> ........ggAAAAACACAAAAGACAGAGATCTCAAAAACAAAGAAGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD563773       --> ........ggAAAAACACAAAAGACAGAGATCTCAAAAACAAAGAAGCAA  Raphanus sativus var. oleiformis
FD964923       --> .......gggAAAAACACAAAAGACAGAGATCTCAAAAACAAAGAAGCAA  Raphanus raphanistrum subsp. maritimus
FD534456       --> .........ggAAAACACAAAAGACAGAGATCTCAAAAACAAAGAAGCAA  Raphanus raphanistrum subsp. maritimus
FD558297       --> .................gAAAAGACAGAGATCTCAAAAACAAAGAAGAAA  Raphanus raphanistrum subsp. landra
FD948047       --> ................ggAAAAGACAGAGATCTCAAAAACAAAGAAGAAA  Raphanus sativus cv Early Scarlet Globe
EY941293       --> ............................gcTCTCAAAAACAAAGAAGAAA  Raphanus sativus cv Early Scarlet Globe
FD534370       --> .............................................gcAAA  Raphanus raphanistrum subsp. maritimus
EY921546       --> ..................................................  Raphanus raphanistrum subsp. landra
EY915608       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               48     -     98
UN16210        --> A--AAAAAA--CAGGGAGATGGGTTTGGTTACAGATGAAGTGAGAGCTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW729177       <-- ACAAAAAAA--CAGAGAGATGGGTTTGGTTACAGATGAAGTGAGAGCTAG
EX898813       <-- A--AAAAAA--CAGGGAGATGGGTTTGGTTACAGATGAAGTGAGAGCTAG
EY919645       <-- ACAAAAAAA--CAGAGAGATGGGTTTGGTTACAGATGAAGTGAGAGCTAG
EV541290       <-- A--AAAAAA--CAGGGAGATGGGTTTGGTTACAGATGAAGTGAGAGCTAG
FD968989       <-- A--AAAAAA--CAGGGAGATGGGTTTGGTTACAGATGAAGTGAGAGCTAG
EW727827       <-- A--AAAAAA--CAGGGAGATGGGTT-GGTTACAGATGAAGTGAGAGCTAG
EW737286       <-- A--AAA--A--CAGGGAGATGGGTTTGGTTACAGATGAAGTGAGAGCTAG
EY909682       <-- A--AAAAAA--CAGGGAGATGGGTTTGGTTACAGATGAAGTGAGAGCTAG
FD528700       <-- A--AAAAAA--CAGGGAGATGGGTTTGGTTACAGATGAAGTGAGAGCTAG
FD545850       <-- A--AAAAAA--CAGGGATATGGGTTTGGTTACAGATGAAGTGAGAGCTAG
FD567430       <-- A--AAAAAC--CAGGGAGATGGGTTTTGTTACAGATGAAGTGAGAGCTAG
FD530387       <-- A--AAAAAA--CAGGGAGATGGGTTTGGTTACAGATGAAGTGAGAGCTAG
FD554225       <-- ACAAAAAAA--CAGAGAGATGGGTTTGGTTACAGATGAAGTGAGAGCTAG
FD943891       <-- ACAAAAAAA--CAGAGAGATGGGTTTGGTTACAGATGAAGTGAGAGCTAG
FD530326       <-- A--AAAAAA--CAGGGAGATGGGTTTGGTTACAGATGAAGTGAGAGCTAG
FD960797       <-- ..................................................
EY917672       <-- ..................................................
EY911423       <-- ..................................................
EW724732       --> ACAAAAAAA--CAGAGAGATGGGTTTGGTTACAGATGAAGTGAGAGCTAG
EW724966       --> A--AAAAAAAACAGGGAGATGGGTTTGGTTACAGATGAAGTGAGAGCTAG
EX894500       --> A--AAAAAA--CAGGGAGATGGGTTTGGTTACAGATGAAGTGAGAGCTAG
EY923912       --> ACAAAAAAA--CAGAGAGATGGGTTTGGTTACAGATGAAGTGAGAGCTAG
EV536950       --> A--AAAAAA--CAGGGAGATGGGTTTGGTTACAGATGAAGTGAGAGCTAG
FD973265       --> A--AAAAAA--CAGGGAGATGGGTTTGGTTACAGATGAAGTGAGAGCTAG
EW723021       --> A--AAAAAA--CAGGGAGATGGGTT-GGTTACAGATGAAGTGAGAGCTAG
EW732608       --> A--AAAA----CAGGGAGATGGGTTTGGTTACAGATGAAGTGAGAGCTAG
EY913457       --> A--AAAAAA--CAGGGAGATGGGTTTGGTTACAGATGAAGTGAGAGCTAG
EY923901       --> A--AAAAAA--CAGGGAGATGGGTTTGGTTACAGATGAAGTGAGAGCTAG
FD532149       --> A--AAAAAA--CAGGGAGATGGGTTTGGTTACAGATGAAGTGAGAGCTAG
FD549826       --> A--AAAAAA--CAGGGATATGGGTTTGGTTACAGATGAAGTGAGAGCTAG
FD563773       --> A--AAAAAA--CAGGGAGATGGGTTTTGTTACAGATGAAGTGAGAGCTAG
FD964923       --> A--AAAAAA--CAGGGAGATGGGTTTGGTTACAGATGAAGTGAGAGCTAG
FD534456       --> A--AAAAAA--CAGGGAGATGGGTTTGGTTACAGATGAAGTGAGAGCTAG
FD558297       --> ACAAAAAAA--CAGAGAGATGGGTTTGGTTACAGATGAAGTGAGAGCTAG
FD948047       --> ACAAAAAAA--CAGAGAGATGGGTTTGGTTACAGATGAAGTGAGAGCTAG
EY941293       --> A--AAAAAA-ACAGGGAGATGGGTTTGGTTACAGATGAAGTGAGAGCTAG
FD534370       --> A--AAAAAA--CAGGGAGATGGGTTTGGTTACAGATGAAGTGAGAGCTAG
EY921546       --> ..................................................
EY915608       --> ..................................................

               98     -    148
UN16210        --> GGCAGAGAAATACACAGGAGATGCGTTATGCCGCGAGAAGACCAAGGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW729177       <-- GGCAGAGAAATACACAGGAGATGCGTTATGCCGCGAGAAGACCAAGGAGT  Raphanus sativus cv Early Scarlet Globe
EX898813       <-- GGCAGAGAAATACACAGGAGATGCGTTATGCCGCGAGAAGACCAAGGAGT  Raphanus sativus cv Early Scarlet Globe
EY919645       <-- GGCAGAGAAATACACAGGAGATGCGTTATGCCGCGAGAAGACCAAGGAGT  Raphanus raphanistrum subsp. landra
EV541290       <-- GGCAGAGAAATACACAGGAGATGCGTTATGCCGCGAGAAGACCAAGGAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968989       <-- GGCAGAGAAATACACAGGAGATGCGTTATGCCGCGAGAAGACCAAGGAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW727827       <-- GGCAGAGAAATACACAGGAGATGCGTTATGCCGCGAGAAGACCAAGGAGT  Raphanus sativus cv Early Scarlet Globe
EW737286       <-- GGCAGAGAAATACACAGGAGATGCGTTATGCCGCGAGAAGACCAAGGAGT  Raphanus sativus cv Rat-Tail Radish #3870
EY909682       <-- GGCAGAGAAATACACAGGAGATGAGCTATGCCGCGAGAAGACCAAGGAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD528700       <-- GGTAGAGAAATACACAGGAGATGCGTTATGCCGCGAGAAGACCAAGGAGT  Raphanus raphanistrum subsp. maritimus
FD545850       <-- GGCAGAGAAATACACAGGAGATGAGCTATGCCGCGAGAAGACCAAGGAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD567430       <-- GGCAGAGAAATACACAGGAGATGAGCTATGCCGCGAGAAGACCAAGGAGT  Raphanus sativus var. oleiformis
FD530387       <-- GGCAGAGAAATACACAGGAGATGAGCTATGCCGCGAGAAGACCAAGGAGT  Raphanus raphanistrum subsp. maritimus
FD554225       <-- GGCAGAGAAATACACAGGAGATGCGTTATGCCGCGAGAAGACCAAGGAGT  Raphanus raphanistrum subsp. landra
FD943891       <-- GGCAGAGAAATACACAGGAGATGCGTTATGCCGCGAGAAGACCAAGGAGT  Raphanus sativus cv Early Scarlet Globe
FD530326       <-- GGCAGAGAAATACACAGGAGATGAGCTATGCCGCGAGAAGACCAAGGAGT  Raphanus raphanistrum subsp. maritimus
FD960797       <-- GGCAGAGAAATACACAGGAGATGAGCTATGCCGCGAGAAGACCAAGGAGT  Raphanus raphanistrum subsp. maritimus
EY917672       <-- .........................................gCAAGGAGT  Raphanus raphanistrum subsp. landra
EY911423       <-- ...............................................gGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW724732       --> GGCAGAGAAATACACAGGAGATGCGTTATGCCGCGAGAAGACCAAGGAGT  Raphanus sativus cv Early Scarlet Globe
EW724966       --> GGCAGAGAAATACACAGGAGATGCGTTATGCCGCGAGAAGACCAAGGAGT  Raphanus sativus cv Early Scarlet Globe
EX894500       --> GGCAGAGAAATACACAGGAGATGCGTTATGCCGCGAGAAGACCAAGGAGT  Raphanus sativus cv Early Scarlet Globe
EY923912       --> GGCAGAGAAATACACAGGAGATGCGTTATGCCGCGAGAAGACCAAGGAGT  Raphanus raphanistrum subsp. landra
EV536950       --> GGCAGAGAAATACACAGGAGATGCGTTATGCCGCGAGAAGACCAAGGAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973265       --> GGCAGAGAAATACACAGGAGATGCGTTATGCCGCGAGAAGACCAAGGAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723021       --> GGCAGAGAAATACACAGGAGATGCGTTATGCCGCGAGAAGACCAAGGAGT  Raphanus sativus cv Early Scarlet Globe
EW732608       --> GGCAGAGAAATACACAGGAGATGCGTTATGCCGCGAGAAGACCAAGGAGT  Raphanus sativus cv Rat-Tail Radish #3870
EY913457       --> GGCAGAGAAATACACAGGAGATGAGCTATGCCGCGAGAAGACCAAGGAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY923901       --> GGCAGAGAAATACACAGGAGATGAGCTATGCCGCGAGAAGACCAAGGAGT  Raphanus raphanistrum subsp. landra
FD532149       --> GGTAGAGAAATACACAGGAGATGCGTTATGCCGCGAGAAGACCAAGGAGT  Raphanus raphanistrum subsp. maritimus
FD549826       --> GGCAGAGAAATACACAGGAGATGAGCTATGCCGCGAGAAGACCAAGGAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD563773       --> GGCAGAGAAATACACAGGAGATGAGCTATGCCGCGAGAAGACCAAGGAGT  Raphanus sativus var. oleiformis
FD964923       --> GGCAGAGAAATACACAGGAGATGAGCTATGCCGCGAGAAGACCAAGGAGT  Raphanus raphanistrum subsp. maritimus
FD534456       --> GGCAGAGAAATACACAGGAGATGAGCTATGCCGCGAGAAGACCAAGGAGT  Raphanus raphanistrum subsp. maritimus
FD558297       --> GGCAGAGAAATACACAGGAGATGCGTTATGCCGCGAGAAGACCAAGGAGT  Raphanus raphanistrum subsp. landra
FD948047       --> GGCAGAGAAATACACAGGAGATGCGTTATGCCGCGAGAAGACCAAGGAGT  Raphanus sativus cv Early Scarlet Globe
EY941293       --> GGCAGAGAAATACACAGGAGATGCGTTATGCCGCGAGAAGACCAAGGAGT  Raphanus sativus cv Early Scarlet Globe
FD534370       --> GGCAGAGAAATACACAGGAGATGAGCTATGCCGCGAGAAGACCAAGGAGT  Raphanus raphanistrum subsp. maritimus
EY921546       --> .........................................gCAAGGAGT  Raphanus raphanistrum subsp. landra
EY915608       --> ...............................................gGT  Raphanus raphanistrum subsp. raphanistrum (NY)

               148    -    198
UN16210        --> TCCTCAAGGAAGTTGATATGCCTAATGGGTTATTGCCATTGAAGGACATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW729177       <-- TCCTCAAGGAAGTTGATATGCCTAATGGGTTATCGCCATTGAAGGACATA  Raphanus sativus cv Early Scarlet Globe
EX898813       <-- TCCTCAAGGAAGTTGATATGCCTAATGGGTTATTGCCATTGAAGGACATT  Raphanus sativus cv Early Scarlet Globe
EY919645       <-- TCCTCAAGGAAGTTGATATGCCTAATGGGTTATTGCCATTGAAGGACATA  Raphanus raphanistrum subsp. landra
EV541290       <-- TCCTCAAGGAAGTTGATATGCCTAATGGGTTATTGCCATTGAAGGACATA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968989       <-- TCCTCAAGGAAGTTGATATGCCTAATGGGTTATTGCCATTGAAGGACATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW727827       <-- TCCTCAAGGAAGTTGATATGCCTAATGGGTTATTGCCATTGAAGGACATT  Raphanus sativus cv Early Scarlet Globe
EW737286       <-- TCCTCAAGGAAGTTGATATGCCTAATGGGTTATTGCCATTGAAGGACATT  Raphanus sativus cv Rat-Tail Radish #3870
EY909682       <-- TCCTCAAGGAAGTTGATATGCCTAATGGGTTATTGCCATTGAAGGACATT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD528700       <-- TCCTCAAGGAAGTTGATATGCCTAATGGGTTATTGCCATTGAAGGACATT  Raphanus raphanistrum subsp. maritimus
FD545850       <-- TCCTCAAGGAAGTTGATATGCCTAATGGGTTATTGCCATTGAAGGACATT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD567430       <-- TCCTCAAGGAAGTTGATATGCCTAATGGGTTATTGCCACTGAAGGACATT  Raphanus sativus var. oleiformis
FD530387       <-- TCCTCAAGGAAGTTGATATGCCTAATGGGTTATTGCCATTGAAGGACATT  Raphanus raphanistrum subsp. maritimus
FD554225       <-- TCCTCAAGGAAGTTGATATGCCTAATGGGTTATTGCCATTGAAGGACATA  Raphanus raphanistrum subsp. landra
FD943891       <-- TCCTCAAGGAAGTTGATATGCCTAATGGGTTATTGCCATTGAAGGACATA  Raphanus sativus cv Early Scarlet Globe
FD530326       <-- TCCTCAAGGAAGTTGATATGCCTAATGGGTTATTGCCATTGAAGGACATT  Raphanus raphanistrum subsp. maritimus
FD960797       <-- TCCTCAAGGAAGTTGATATGCCTAATGGGTTATTGCCATTGAAGGACATT  Raphanus raphanistrum subsp. maritimus
EY917672       <-- TCCTCAAGGAAGTTGATATGCCTAATGGGTTATTGCCATTGAAGGACATA  Raphanus raphanistrum subsp. landra
EY911423       <-- TCCTC--AGAAGTTGATATGCCTAATGGGTTATTGCCATTGAAGGACATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW724732       --> TCCTCAAGGAAGTTGATATGCCTAATGGGTTATCGCCATTGAAGGACATA  Raphanus sativus cv Early Scarlet Globe
EW724966       --> TCCTCAAGGAAGTTGATATGCCTAATGGGTTATTGCCATTGAAGGACATT  Raphanus sativus cv Early Scarlet Globe
EX894500       --> TCCTCAAGGAAGTTGATATGCCTAATGGGTTATTGCCATTGAAGGACATT  Raphanus sativus cv Early Scarlet Globe
EY923912       --> TCCTCAAGGAAGTTGATATGCCTAATGGGTTATTGCCATTGAAGGACATA  Raphanus raphanistrum subsp. landra
EV536950       --> TCCTCAAGGAAGTTGATATGCCTAATGGGTTATTGCCATTGAAGGACATA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973265       --> TCCTCAAGGAAGTTGATATGCCTAATGGGTTATTGCCATTGAAGGACATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723021       --> TCCTCAAGGAAGTTGATATGCCTAATGGGTTATTGCCATTGAAGGACATT  Raphanus sativus cv Early Scarlet Globe
EW732608       --> TCCTCAAGGAAGTTGATATGCCTAATGGGTTATTGCCATTGAAGGACATT  Raphanus sativus cv Rat-Tail Radish #3870
EY913457       --> TCCTCAAGGAAGTTGATATGCCTAATGGGTTATTGCCATTGAAGGACATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY923901       --> TCCTCAAGGAAGTTGATATGCCTAATGGGTTATTGCCACTGAAGGACATT  Raphanus raphanistrum subsp. landra
FD532149       --> TCCTCAAGGAAGTTGATATGCCTAATGGGTTATTGCCATTGAAGGACATT  Raphanus raphanistrum subsp. maritimus
FD549826       --> TCCTCAAGGAAGTTGATATGCCTAATGGGTTATTGCCATTGAAGGACATT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD563773       --> TCCTCAAGGAAGTTGATATGCCTAATGGGTTATTGCCACTGAAGGACATT  Raphanus sativus var. oleiformis
FD964923       --> TCCTCAAGGAA-TTGATATGCCTAATGGGTTATTGCCATTGAAGGACATT  Raphanus raphanistrum subsp. maritimus
FD534456       --> TCCTCAAGGAAGTTGATATGCCTAATGGGTTATTGCCATTGAAGGACATT  Raphanus raphanistrum subsp. maritimus
FD558297       --> TCCTCAAGGAAGTTGATATGCCTAATGGGTTATTGCCATTGAAGGACATA  Raphanus raphanistrum subsp. landra
FD948047       --> TCCTCAAGGAAGTTGATATGCCTAATGGGTTATTGCCATTGAAGGACATA  Raphanus sativus cv Early Scarlet Globe
EY941293       --> TCCTCAAGGAAGTTGATATGCCTAATGGGTTATTGCCATTGAAGGACATT  Raphanus sativus cv Early Scarlet Globe
FD534370       --> TCCTCAAGGAAGTTGATATGCCTAATGGGTTATTGCCATTGAAGGACATT  Raphanus raphanistrum subsp. maritimus
EY921546       --> TCCTCAAGGAAGTTGATATGCCTAATGGGTTATTGCCATTGAAGGACATA  Raphanus raphanistrum subsp. landra
EY915608       --> TCCTCA--GAAGTTGATATGCCTAATGGGTTATTGCCATTGAAGGACATT  Raphanus raphanistrum subsp. raphanistrum (NY)

               198    -    248
UN16210        --> GAAGAGGTTGGATACGACAGAGAAACCGGTGTTGTGTGGCTGAAGCAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW729177       <-- GAAGAGGTTGGATACGACAGAGAAACCGGTGTTGTGTGGCTGAAGCAGAA
EX898813       <-- GAAGAGGTTGGATACGACAGAGAAACCGGTGTTGTGTGGCTGAAGCAGAA
EY919645       <-- GAAGAGGTTGGATACGACAGAGAAACCGGTGTTGTGTGGCTGAAGCAGAA
EV541290       <-- GAAGAGGTTGGATACGACAGAGAAACCGGTGTTGTGTGGCTGAAGCAGAA
FD968989       <-- GAAGAGGTTGGATACGACAGAGAAACCGGTGTTGTGTGGCTGAAGCAGAA
EW727827       <-- GAAGAGGTTGGATACGACAGAGAAACCGGTGTTGTGTGGCTGAAGCAGAA
EW737286       <-- GAAGAGGTTGGATACGACAGAGAAACCGGTGTTGTGTGGCTGAAGCAGAA
EY909682       <-- GAAGAGGTTGGATACGACAGAGAAACCGGTGTTGTGTGGCTGAAGCAGAA
FD528700       <-- GAAGAGGTTGGATACGACAGAGAAACCGGTGTTGTGTGGCTGAAGCAGAA
FD545850       <-- GAAGAGGTTGGATACGACAGAGAAACCGGTGTTGT-TGGCTGAAGCAGAA
FD567430       <-- GAAGAGGTTGGATACGACAGAGAAACCGGTGTTGTGTGGCTGAAGCAGAA
FD530387       <-- GAAGAGGTTGGATACGACAGAGAAACCGGTGTTGCGTGGCTGAAGCAGAA
FD554225       <-- GAAGAGGTTGGATACGACAGAGAAACCGGTGTTGTGTGGCTGAAGCAGAA
FD943891       <-- GAAGAGGTTGGATACGACAGAGAAACCGGTGTTGTGTGGCTGAAGCAGAA
FD530326       <-- GAAGAGGTTGGATACGACAGAGAAACCGGTGTTGTGTGGCTGAAGCAGAA
FD960797       <-- GAAGAGGTTGGATACGACAGAGAAACCGGTGTTGTGTGGCTGAAGCAGAA
EY917672       <-- GAAGAGGTTGGATACGACAGAGAAACCGGTGTTGTGTGGCTGAAGCAGAA
EY911423       <-- GAAGAGGTTGGATACGACAGAGAAACCGGTGTTGTGTGGCTGAAGCAGAA
EW724732       --> GAAGAGGTTGGATACGACAGAGAAACCGGTGTTGTGTGGCTGAAGCAGAA
EW724966       --> GAAGAGGTTGGATACGACAGAGAAACCGGTGTTGTGTGGCTGAAGCAGAA
EX894500       --> GAAGAGGTTGGATACGACAGAGAAACCGGTGTTGTGTGGCTGAAGCAGAA
EY923912       --> GAAGAGGTTGGATACGACAGAGAAACCGGTGTTGTGTGGCTGAAGCAGAA
EV536950       --> GAAGAGGTTGGATACGACAGAGAAACCGGTGTTGTGTGGCTGAAGCAGAA
FD973265       --> GAAGAGGTTGGATACGACAGAGAAACCGGTGTTGTGTGGCTGAAGCAGAA
EW723021       --> GAAGAGGTTGGATACGACAGAGAAACCGGTGTTGTGTGGCTGAAGCAGAA
EW732608       --> GAAGAGGTTGGATACGACAGAGAAACCGGTGTTGTGTGGCTGAAGCAGAA
EY913457       --> GAAGAGGTTGGATACGACAGAGAAACCGGTGTTGTGTGGCTGAAGCAGAA
EY923901       --> GAAGAGGTTGGATACGACAGAGAAACCGGTGTTGTGTGGCTGAAGCAGAA
FD532149       --> GAAGAGGTTGGATACGACAGAGAAACCGGTGTTGTGTGGCTGAAGCAGAA
FD549826       --> GAAGAGGTTGGATACGACAGAGAAACCGGTGTTGT-TGGCTGAAGCAGAA
FD563773       --> GAAGAGGTTGGATACGACAGAGAAACCGGTGTTGTGTGGCTGAAGCAGAA
FD964923       --> GAAGAGGT-GGATACGACAGAGAAACCGGTGTTGTGTGGCTGAAGCA-AA
FD534456       --> GAAGAGGTTGGATACGACAGAGAAACCGGTGTTGCGTGGCTGAAGCAGAA
FD558297       --> GAAGAGGTTGGATACGACAGAGAAACCGGTGTTGTGTGGCTGAAGCAGAA
FD948047       --> GAAGAGGTTGGATACGACAGAGAAACCGGTGTTGTGTGGCTGAAGCAGAA
EY941293       --> GAAGAGGTTGGATACGACAGAGAAACCGGTGTTGTGTGGCTGAAGCAGAA
FD534370       --> GAAGAGGTTGGATACGACAGAGAAACCGGTGTTGTGTGGCTGAAGCAGAA
EY921546       --> GAAGAGGTTGGATACGACAGAGAAACCGGTGTTGTGTGGCTGAAGCAGAA
EY915608       --> GAAGAGGTTGGATACGACAGAGAAACCGGTGTTGTGTGGCTGAAGCAGAA

               248    -    298
UN16210        --> GAAGAGCATCACTCACAAGTTTGAATCTATTGGGAAACTTGTCTCTTACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW729177       <-- GAAGAGCATCACTCACAAGTTTGAATCTATTGGGAAACTTGTCTCTTACG
EX898813       <-- GA-GAGCATCACTCACAAGTTCGAATCTATTGGGAAACTTGTTTCTTACG
EY919645       <-- GAAGAGCATCACTCACAAGTTTGAATCTATTGGGAAACTTGTCTCTTGCG
EV541290       <-- GAAGAGCATCACTCACAAGTTTGAATCTATTGGGAAACTTGTTTCTTACG
FD968989       <-- GAAGAGCATCACTCACAAGTTTGAATCTATTGGGAAACTTGTTTCTTACG
EW727827       <-- GAAGAGCATCACTCACAAGTTCGAATCTATTGGGAAACTTGTCTCTTACG
EW737286       <-- GAAGAGCATCACTCACAAGTTTGAATCTATCGGGAAACTTGTCTCTTACG
EY909682       <-- GAAGAGCATCACTCACAAGTTTGAATCTATTGGGAAACTTGTTTCTTACG
FD528700       <-- GAAGAGCATCACTCACAAGTTTGAATCTATCGGGAAACTTGTTTCTTACG
FD545850       <-- GAAGAGCGTCACTCACAAGTTTGAATCTATTGGGAAACTTGTTTCTTACG
FD567430       <-- GAAGAGCATCACTCACAAGTTTGAATCTATTGGGAAACTTGTCTCTTACG
FD530387       <-- GAATAGCATCACTCACAAGTTTGAATCTATTGGGAAACTTGTCTCTTACG
FD554225       <-- GAAGAGCATCACTCACAAGTTTGAATCTATTGGGAAACTTGTCTCTTACG
FD943891       <-- GAAGAGCATCACTCACAAGTTTGAATCTATTGGGAAACTTGTCTCTTACG
FD530326       <-- GAAGAGCATCACTCACAAGTTTGAATCTATTGGGAAACTTGTCTCTTACG
FD960797       <-- GAAGAGC-CCACTCACAAGTTTGAATTTATTGGGAAACTTGTTTTTTACG
EY917672       <-- GAAGAGCATCACTCACAAGTTTGAATCTATTGGGAAACTTGTCTCTTACG
EY911423       <-- GAAGAGCATCACTCACAAGTTTGAATCTATTGGGAAACTTGTCTCTTACG
EW724732       --> GAAGAGCATCACTCACAAGTTTGAATCTATTGGGAAACTTGTCTCTTACG
EW724966       --> GAAGAGCATCACTCACAAGTTCGAATCTATTGGGAAACTTGTCTCTTACG
EX894500       --> GA-GAGCATCACTCACAAGTTCGAATCTATTGGGAAACTTGTCTCTTACG
EY923912       --> GAAGAGCATCACTCACAAGTTTGAATCTATTGGGAAACTTGTCTCTTGCG
EV536950       --> GAAGAGCATCACTCACAAGTTTGAATCTATTGGGAAACTTGTCTCTTACG
FD973265       --> GAAGAGCATCACTCACAAGTTTGAATCTATTGGGAAACTTGTCTCTTACG
EW723021       --> GAAGAGCATCACTCACAAGTTCGAATCTATTGGGAAACTTGTCTCTTACG
EW732608       --> GAAGAGCATCACTCACAAGTTTGAATCTATCGGGAAACTTGTCTCTTACG
EY913457       --> GAAGAGCATCACTCACAAGTTTGAATCTATTGGGAAACTTGTCTCTTACG
EY923901       --> GAAGAGCATCACTCACAAGTTTGAATCTATTGGGAAACTTGTCTCTTACG
FD532149       --> GAAGAGCATCACTCACAAGTTTGAATCTATCGGGAAACTTGTCTCTTACG
FD549826       --> GAAGAGCGTCACTCACAAGTTTGAATCTATTGGGAAACTTGTCTCTTACG
FD563773       --> GAAGAGCATCACTCACAAGTTTGAATCTATTGGGAAACTTGTCTCTTACG
FD964923       --> -AAGAGCA-CACTCACAAGTTTGAATCTATTGGGAAACTTGTCTCTTACG
FD534456       --> GAATAGCATCACTCACAAGTTTGAATCTATTGGGAAACTTGTCTCTTACG
FD558297       --> GAAGAGCATCACTCACAAGTTTGAATCTATTGGGAAACTTGTCTCTTACG
FD948047       --> GAAGAGCATCACTCACAAGTTTGAATCTATTGGGAAACTTGTCTCTTACG
EY941293       --> GAAGAGCATCACTCACAAGTTCGAATCTATTGGGAAACTTGTCTCTTACG
FD534370       --> GAAGAGCATCACTCACAAGTTTGAATCTATTGGGAAACTTGTCTCTTACG
EY921546       --> GAAGAGCATCACTCACAAGTTTGAATCTATTGGGAAACTTGTCTCTTACG
EY915608       --> GAAGAGCATCACTCACAAGTTTGAATCTATTGGGAAACTTGTCTCTTACG

               298    -    348
UN16210        --> GCACTGAGGTCACTGCCGTGGTGGAAGTCGGAAAGATCAAGAAGCTTACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW729177       <-- GCACTGAGGTCACTGCCGTCGTGGAAGTCGGAAAGATCAAGAAGCTGACC
EX898813       <-- GCACCGAGGTCACTGCCGTGGTGGAAGTCGGAAAGATCAAGAAGCTTACC
EY919645       <-- GCACTGAGGTCACTGCCGTCGTGGAAGTCGGAAAGATCAAGAAGCTGACC
EV541290       <-- GCACTGAGGTCACTGCCGTGGTGAAAGTCGGAAAGATCAAGAAGCTTACC
FD968989       <-- GCACTGAGGTCACTGCCGTGGTGGAAGTCGGAAAGATCAAGAAGCTTACC
EW727827       <-- GCACCGAGGTCACTGCCGTGGTGGAAGTCGGAATGATCAAGAAGCTTACC
EW737286       <-- GCACTGAGGTCACTGCCGTGGTGGAAGTCGGAAAGATCAAGAAGCTGACC
EY909682       <-- GCACTGAGGTCACTGCCGTGGTGGAAGTCGGAAAGATCAAGAAGCTTACC
FD528700       <-- GCACTGAGGTCACTGCCGTGGTGGAAGTCGGAAAGATCAAGAAGCTGACC
FD545850       <-- GCACTGAGGTCACTGCCGTGGTGGAAGTCGGAAAGATCAAGAAGCTTACC
FD567430       <-- GCACTGAGGTCACTGCCGTGGTGGAAGTCGGAAAGATCAAGAAGCTTACC
FD530387       <-- GCACTGAGGTCACTGCCGTGGTGGAAGTCGGAAAGATCAAGAAGCTTACC
FD554225       <-- GCACTGAGGTCACTGCCGTCGTGGAAGTCGGAAAGATCAAGAAGCTGACC
FD943891       <-- GCACTGAGGTCACTGCCGTCGTGGAAGTCGGAAAGATCAAGAAGCTGACC
FD530326       <-- GCACTGAGGTCACTGCCGTGGTGGAAGTCGGAAAGATCAAGAAGCTTACC
FD960797       <-- GCACTGAGGTCACTGCCGTGGTGGAAGTCGGAAAGATCAAGAAGCTTACC
EY917672       <-- GCACTGAGGTCACTGCCGTCGTGGAAGTCGGAAAGATCAAGAAGCTGACC
EY911423       <-- GCACTGAGGTCACTGCCGTGGTGGAAGTCGGAAAGATCAAGAAGCTTACC
EW724732       --> GCACTGAGGTCACTGCCGTCGTGGAAGTCGGAAAGATCAAGAAGCTGACC
EW724966       --> GCACCGAGGTCACTGCCGTGGTGGAAGTCGGAAAGATCAAGAAGCTTACC
EX894500       --> GCACCGAGGTCACTGCCGTGGTGGAAGTCGGAAAGATCAAGAAGCTTACC
EY923912       --> GCACTGAGGTCACTGCCGTCGTGGAAGTCGGAAAGATCAAGAAGCTGACC
EV536950       --> GCACTGAGGTCACTGCCGTGGTGAAAGTCGGAAAGATCAAGAAGCTTACC
FD973265       --> GCACTGAGGTCACTGCCGTGGTGGAAGTCGGAAAGATCAAGAAGCTTACC
EW723021       --> GCACCGAGGTCACTGCCGTGGTGGAAGTCGGAATGATCAAGAAGCTTACC
EW732608       --> GCACTGAGGTCACTGCCGTGGTGGAAGTCGGAAAGATCAAGAAGCTGACC
EY913457       --> GCACTGAGGTCACTGCCGTGGTGGAAGTCGGAAAGATCAAGAAGCTTACC
EY923901       --> GCACTGAGGTCACTGCCGTGGTGGAAGTCGGAAAGATCAAGAAGCTTACC
FD532149       --> GCACTGAGGTCACTGCCGTGGTGGAAGTCGGAAAGATCAAGAAGCTGACC
FD549826       --> GCACTGAGGTCACTGCCGTGGTGGAAGTCGGAAAGATCAAGAAGCTTACC
FD563773       --> GCACTGAGGTCACTGCCGTGGTGGAAGTCGGAAAGATCAAGAAGCTTACC
FD964923       --> GCACTGAGGTCACTGCCGTGGTGGAA-TCGGAAAGATCAAGAAGCTTACC
FD534456       --> GCACTGAGGTCACTGCCGTGGTGGAAGTCGGAAAGATCAAGAAGCTTACC
FD558297       --> GCACTGAGGTCACTGCCGTCGTGGAAGTCGGAAAGATCAAGAAGCTGACC
FD948047       --> GCACTGAGGTCACTGCCGTCGTGGAAGTCGGAAAGATCAAGAAGCTGACC
EY941293       --> GCACCGAGGTCACTGCCGTGGTGGAAGTCGGAAAGATCAAGAAGCTTACC
FD534370       --> GCACTGAGGTCACTGCCGTGGTGGAAGTCGGAAAGATCAAGAAGCTTACC
EY921546       --> GCACTGAGGTCACTGCCGTCGTGGAAGTCGGAAAGATCAAGAAGCTGACC
EY915608       --> GCACTGAGGTCACTGCCGTGGTGGAAGTCGGAAAGATCAAGAAGCTTACC

               348    -    398
UN16210        --> GGTGTTAAGGCCAAGGAGCTTCTTATCTGGGTCACTCTCAATGAGCTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW729177       <-- GGTGTTAAGGCCAAGGAGCTTCTTATCTGGGTCACTCTCAATGAGCTTGT
EX898813       <-- GGTGTTAAGGCCAAGGAGCTTCTTATTTGGGTCACTCTCAATGAGCTTGT
EY919645       <-- GGTGTTAAGGCCAAGGAGCTTCTTATTTGGGTCACTCTCAATGAGCTTGT
EV541290       <-- GGTGTTAAGGCCAAGGAGCTTCTTATCTGGGTCACTCTCAATGAGCTTGT
FD968989       <-- GGTGTTAAGGCCAAGGAGCTTCTTATCTGGGTCACTCTCAATGAGCTTGT
EW727827       <-- GGTGTTAAGGCCAAGGAGCTTCTTATTTGGGTCACTCTCAATGAGCTTGT
EW737286       <-- GGTGTTAAAGCCAAGGAGCTTCTTATCTGGGTCACTCTCAATGAGCTTGT
EY909682       <-- GGTGTTAAGGCCAAGGAGCTTCTTATCTGGGTCACTCTCAATGAGCTTGT
FD528700       <-- GGTGTTAAAGCCAAGGAGCTTCTTATCTGGGTCACTCTCAATGGGCTTGT
FD545850       <-- GGTGTTAAGGCCAAGGAGCTTCTTATCTGGGTCACTCTCAATGAGCTTGT
FD567430       <-- GGTGTTAAGGCCAAGGAGCTTCTTATCTGGGTCACTCTCAATGAGCTTGT
FD530387       <-- GGTGTTAAGGCCAAGGAGCTTCTTATCTGGGTCACTCTCAATGAGCTTGT
FD554225       <-- GGTGTTAAGGCCAAGGAGCTTCTTATCTGGGTCACTCTCAATGAGCTTGT
FD943891       <-- GGTGTTAAGGCCAAGGAGCTTCTTATCTGGGTCACTCTCAATGAGCTTGT
FD530326       <-- GGTGTTAAGGCCAAGGAGCTTCTTATCTGGGTCACTCTCAATGAGCTTGT
FD960797       <-- GGTGTTAAGGCCAAGGAGCTTTTTATTTGGGTCACTCTCAATGAGCTTGT
EY917672       <-- GGTGTTAAGGCCAAGGAGCTTCTTATCTGGGTCACTCTCAATGAGCTTGT
EY911423       <-- GGTGTTAAGGCCAAGGAGCTTCTTATCTGGGTCACTCTCAATGAGCTTGT
EW724732       --> GGTGTTAAGGCCAAGGAGCTTCTTATCTGGGTCACTCTCAATGAGCTTGT
EW724966       --> GGTGTTAAGGCCAAGGAGCTTCTTATCTGGGTCACTCTCAATGAGCTTGT
EX894500       --> GGTGTTAAGGCCAAGGAGCTTCTTATCTGGGTCACTCTCAATGAGCTTGT
EY923912       --> GGTGTTAAGGCCAAGGAGCTTCTTATCTGGGTCACTCTCAATGAGCTTGT
EV536950       --> GGTGTTAAGGCCAAGGAGCTTCTTATCTGGGTCACTCTCAATGAGCTTGT
FD973265       --> GGTGTTAAGGCCAAGGAGCTTCTTATCTGGGTCACTCTCAATGAGCTTGT
EW723021       --> GGTGTTAAGGCCAAGGAGCTTCTTATCTGGGTCACTCTCAATGAGCTTGT
EW732608       --> GGTGTTAAAGCCAAGGAGCTTCTTATCTGGGTCACTCTCAATGAGCTTGT
EY913457       --> GGTGTTAAGGCCAAGGAGCTTCTTATCTGGGTCACTCTCAATGAGCTTGT
EY923901       --> GGTGTTAAGGCCAAGGAGCTTCTTATCTGGGTCACTCTCAATGAGCTTGT
FD532149       --> GGTGTTAAAGCCAAGGAGCTTCTTATCTGGGTCACTCTCAATGGGCTTGT
FD549826       --> GGTGTTAAGGCCAAGGAGCTTCTTATCTGGGTCACTCTCAATGAGCTTGT
FD563773       --> GGTGTTAAGGCCAAGGAGCTTCTTATCTGGGTCACTCTCAATGAGCTTGT
FD964923       --> GGTGTTAAGGCCAAGGAGCTTCTTATCTGG-TCACTCTCA-TGAGC....
FD534456       --> GGTGTTAAGGCCAAGGAGCTTCTTATCTGGGTCACTCTCAATGAGCTTGT
FD558297       --> GGTGTTAAGGCCAAGGAGCTTCTTATCTGGGTCACTCTCAATGAGCTTGT
FD948047       --> GGTGTTAAGGCCAAGGAGCTTCTTATCTGGGTCACTCTCAATGAGCTTGT
EY941293       --> GGTGTTAAGGCCAAGGAGCTTCTTATCTGGGTCACTCTCAATGAGCTTGT
FD534370       --> GGTGTTAAGGCCAAGGAGCTTCTTATCTGGGTCACTCTCAATGAGCTTGT
EY921546       --> GGTGTTAAGGCCAAGGAGCTTCTTATCTGGGTCACTCTCAATGAGCTTGT
EY915608       --> GGTGTTAAGGCCAAGGAGCTTCTTATCTGGGTCACTCTCAATGAGCTTGT

               398    -    448
UN16210        --> CTTGGAGCAGCCAACAAGTTCTGGGAAGATCAATTTCAGGACACCGACCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW729177       <-- CTTGGAGCAGCCAACAAGTTCTGGGAAGATCAATTTCAGGACACCGACTG  Raphanus sativus cv Early Scarlet Globe
EX898813       <-- CTTGGAGCAGCCAACAAGTTCTGGGAAGATCAATTTCAGGACACCGACTG  Raphanus sativus cv Early Scarlet Globe
EY919645       <-- CTTGGAGCAGCCAACAAGTTCTGGGAAGATCAATTTCAGGACACCGACTG  Raphanus raphanistrum subsp. landra
EV541290       <-- CTTGGAGCAGCCAACAAGTTCTGGGAAGATCAATTTCAGGACACCGACCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968989       <-- CTCGGAGCAGCCAACAAGTTCTGGGAAGATCAATTTCAGGACACCGACCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW727827       <-- CTTGGAGCAGCCAACAAGTTCTGGGAAGATCAATTTCAGGACACCGACTG  Raphanus sativus cv Early Scarlet Globe
EW737286       <-- CTTGGAGCAGCCAACAAGTTCTGGGAAGATCAATTTCAGGACACCGACCG  Raphanus sativus cv Rat-Tail Radish #3870
EY909682       <-- CTTGGAGCAGCCAACAAGTTCTGGGAAGATCAATTTCAGGACACCGACCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD528700       <-- CTTGGAGCAGCCAACAAGTTCTGGGAAGATCAATTTCAGGACACCGACCG  Raphanus raphanistrum subsp. maritimus
FD545850       <-- CTTGGAGCAGCCAACAAGTTCTGGGAAGATCAATTTCAGGACACCGACCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD567430       <-- CTTGGAGCAGCCAACAAGTTCTGGGAAGATCAATTTCAGGACACCGACCG  Raphanus sativus var. oleiformis
FD530387       <-- CTTGGAGCAGCCAACAAGTTCTGGGAAGATCAATTTCAGGACACCGACCG  Raphanus raphanistrum subsp. maritimus
FD554225       <-- CTTGGAGCAGCCAACAAGTTCTGGGAAGATCAATTTCAGGACACCGACTG  Raphanus raphanistrum subsp. landra
FD943891       <-- CTTGGAGCAGCCAACAAGTTCTGGGAAGATCAATTTCAGGACACCGACTG  Raphanus sativus cv Early Scarlet Globe
FD530326       <-- CTTGGAGCAGCCAACAAGTTCTGGGAAGATCAATTTCAGGACACCGACCG  Raphanus raphanistrum subsp. maritimus
FD960797       <-- CTTGGAGCAGCCAACAAGTTTTGGGAAGATCAATTTCAGGACCCCGACCG  Raphanus raphanistrum subsp. maritimus
EY917672       <-- CTTGGAGCAGCCAACAAGTTCTGGGAAGATCAATTTCAGGACACCGACTG  Raphanus raphanistrum subsp. landra
EY911423       <-- CTTGGAGCAGCCAACAAGTTCTGGGAAGATCAATTTCAGGACACCGACCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW724732       --> CTTGGAGCAGCCAACAAGTTCTGGGAAGATCAATTTCAGGACACCGACTG  Raphanus sativus cv Early Scarlet Globe
EW724966       --> CTTGGAGCAGCCAACAAGTTCTGGGAAGATCAATTTCAGGACACCGACTG  Raphanus sativus cv Early Scarlet Globe
EX894500       --> CTTGGAGCAGCCAACAAGTTCTGGGAAGATCAATTTCAGGACACCGACTG  Raphanus sativus cv Early Scarlet Globe
EY923912       --> CTTGGAGCAGCCAACAAGTTCTGGGAAGATCAATTTCAGGACACCGACTG  Raphanus raphanistrum subsp. landra
EV536950       --> CTTGGAGCAGCCAACAAGTTCTGGGAAGATCAATTTCAGGACACCGACCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973265       --> CTCGGAGCAGCCAACAAGTTCTGGGAAGATCAATTTCAGGACACCGACCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723021       --> CTTGGAGCAGCCAACAAGTTCTGGGAAGATCAATTTCAGGACACCGACTG  Raphanus sativus cv Early Scarlet Globe
EW732608       --> CTTGGAGCAGCCAACAAGTTCTGGGAAGATCAATTTCAGGACACCGACCG  Raphanus sativus cv Rat-Tail Radish #3870
EY913457       --> CTTGGAGCAGCCAACAAGTTCTGGGAAGATCAATTTCAGGACACCGACCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY923901       --> CTTGGAGCAGCCAACAAGTTCTGGGAAGATCAATTTCAGGAC-CCGACCG  Raphanus raphanistrum subsp. landra
FD532149       --> CTTGGAGCAGCCAACAAGTTCTGGGAAGATCAATTTCAGGACACCGACCG  Raphanus raphanistrum subsp. maritimus
FD549826       --> CTTGGAGCAGCCAACAAGTTCTGGGAAGATCAATTTCAGGACACCGACCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD563773       --> CTTGGAGCAGCCAACAAGTTCTGGGAAGATCAATTTCAGGACACCGACCG  Raphanus sativus var. oleiformis
FD964923       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD534456       --> CTTGGAGCAGCCAACAAGTTCTGGGAAGATCAATTTCAGGACACCGACCG  Raphanus raphanistrum subsp. maritimus
FD558297       --> CTTGGAGCAGCCAACAAGTTCTGGGAAGATCAATTTCAGGACACCGACTG  Raphanus raphanistrum subsp. landra
FD948047       --> CTTGGAGCAGCCAACAAGTTCTGGGAAGATCAATT...............  Raphanus sativus cv Early Scarlet Globe
EY941293       --> CTTGGAGCAGCCAACAAGTTCTGGGAAGATCAATTTCAGGACACCGACTG  Raphanus sativus cv Early Scarlet Globe
FD534370       --> CTTGGAGCAGCCAACAAGTTCTGGGAAGATCAATTTCAGGACACCGACCG  Raphanus raphanistrum subsp. maritimus
EY921546       --> CTTGGAGCAGCCAACAAGTTCTGGGAAGATCAATTTCAGGACACCGACTG  Raphanus raphanistrum subsp. landra
EY915608       --> CTTGGAGCAGCCAACAAGTTCTGGGAAGATCAATTTCAGGACACCGACCG  Raphanus raphanistrum subsp. raphanistrum (NY)

               448    -    498
UN16210        --> GATTGTCCAGGACTTTCCCTGTTTCAGCTTTTGTGGTTCCTGAGGTTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW729177       <-- GATTGTCCAGGACTTTCCCTGTTTCAGCTTTTGTGGTTCCTGAGGTTGAG
EX898813       <-- GATTGTCCCGGACTTTCCCTGTTTCAGCTTTTGTGGTCCCCGAGGTTGAG
EY919645       <-- GATTGTCCAGGACTTTCCCTGTTTCAGCTTTTGTGGTTCCTGAGGTTGAG
EV541290       <-- GATTGTCCAGGACTTTCCCTGTTTCAGCTTTTGTGGTTCCTGAGGTTGAG
FD968989       <-- GATTGTCCAGGACTTTCCCTGTTTCAGCTTTTGTGGTTCCTGAGGTTGAG
EW727827       <-- GATTGTCCCGGACTTTCCCTGTTTCAGCTTTTGTGGTCCCCGAGGTTGAG
EW737286       <-- GATTGTCCATGACTTTCCCTGTTTCAGCTTTTGTGGTTCCTGAGGTTGAG
EY909682       <-- GATTGTCCAGGACTTTCCCTGTTTCAGCTTTTGTGGTTCCTGAGGTTGAG
FD528700       <-- GATTGTCCAGGACTTTCCCTGTTTCAGCTTTTGTGGTTCCTGAGGTTGAG
FD545850       <-- GATTGTCCAGGACTTTCCCTGTTTCAGCTTTTGTGGTTCCTGAGGTTGAG
FD567430       <-- GATTGTCCAGGACTTTCCCTGTTACAGCTTTTGTGGTTCCTGAGGTTGAG
FD530387       <-- GATTGTCCAGGACTTTCCCTGTTTCAGCTTTTGTGGTTCCTGAGGTTGAG
FD554225       <-- GATTGTCCAGGACTTTCCCTGTTTCAGCTTTTGTGGTTCCTGAGGTTGAG
FD943891       <-- GATTGTCCAGGACTTTCCCTGTTTCAGCTTTTGTGGCTCCTGAGGTTGAG
FD530326       <-- GATTGTCCAGGACTTTCCCTGTTTCAGCTTTTGTGGTTCCTGAGGTTGAG
FD960797       <-- GATTGTCCAGGACTTTCCCTGTTTCAGCTTTTGTGGTTCCTGAGGTTGAG
EY917672       <-- GATTGTCCAGGACTTTCCCTGTTTCAGCTTTTGTGGTTCCTGAGGTTGAG
EY911423       <-- GATTGTCCAGGACTTTCCCTGTTTCAGCTTTTGTGGTTCCTGAGGTTGAG
EW724732       --> GATTGTCCAGGACTTTCCCTGTTTCAGCTTTTGTGGTTCCTGAGGTTGAG
EW724966       --> GATTGTCCCGGACTTTCCCTGTTTCAGCTTTTGTGGTCCCCGAGGTTGAG
EX894500       --> GATTGTCCCGGACTTTCCCTGTTTCAGCTTTTGTGGTCCCCGAGGTTGAG
EY923912       --> GATTGTCCAGGACTTTCCCTGTTTCAGCTTTTGTGGTTCCTGAGGTTGAG
EV536950       --> GATTGTCCAGGACTTTCCCTGTTTCAGCTTTTGTGGTTCCTGAGGTTGAG
FD973265       --> GATTGTCCAGGACTTTCCCTGTTTCAGCTTTTGTGGTTCCTGAGGTTGAG
EW723021       --> GATTGTCCCGGACTTTCCCTGTTTCAGCTTTTGTGGTCCCCGAGGTTGAG
EW732608       --> GATTGTCCATGACTTTCCCTGTTTCAGCTTTTGTGGTTCCTGAGGTTGAG
EY913457       --> GATTGTCCAGGACTTTCCCTGTTTCAGCTTTTGTGGTTCCTGAGGTTGAG
EY923901       --> GATTGTCCAGGACTTTCCCTGTTTCAGCTTTTGTGGTTCCTGAGGTTGAG
FD532149       --> GATTGTCCAGGACTTTCCCTGTTTCAGCTTTTGTGGTTCCTGAGGTTGAG
FD549826       --> GATTGTCCAGGACTTTCCCTGTTTCAGCTTTTGTGGTTCCTGAGGTTGAG
FD563773       --> GATTGTCCAGGACTTTCCCTGTTACAGCTTTTGTGGTTCCTGAGGTTGAG
FD964923       --> ..................................................
FD534456       --> GATTGTCCAGGACTTTCCCTGTTTCAGCTTTTGTGGTTCCTGAGGTTGAG
FD558297       --> GATTGTCCAGGACTTTCCCTGTTTCAGCTTTTGTGGTTCCTGAGGTTGAG
FD948047       --> ..................................................
EY941293       --> GATTGTCCCGGACTTTCCCTGTTTCAGCTTTTGTGGTCCCCGAGGTTGAG
FD534370       --> GATTGTCCAGGACTTTCCCTGTTTCAGCTTTTGTGGTTCCTGAGGTTGAG
EY921546       --> GATTGTCCAGGACTTTCCCTGTTTCAGCTTTTGTGGTTCCTGAGGTTGAG
EY915608       --> GATTGTCCAGGACTTTCCCTGTTTCAGCTTTTGTGGTTCCTGAGGTTGAG

               498    -    548
UN16210        --> AAGCCTGCAGTGGCTAAAGAAGCTATTGCAAATTAGAGATGCTTACTTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW729177       <-- AAGCCTGCAGTGGCTAAAGAAGCTATTGCAAATTAGAGATGCTTACTTAC
EX898813       <-- AAACCTGCAGTGGCTAAAGAAGCTATTGCAAATTAGAGATGCTTACTTAC
EY919645       <-- AAGCCTGCAGTGGCTAAAGAAGCTATTGCAAATTAGAGATGTTTACTTAC
EV541290       <-- AAGCCTGCAGTGGCTAAAGAAGCTATTGCAAATTAGAGATGCTTACTTAC
FD968989       <-- AAGCCTGCAGTGGCTAAAGAAGCTATTGCAAATTAGAGATGCTTACTTAC
EW727827       <-- AAACCTGCAGTGGCTAAAGAAGCTATTGCAAATTAGAGATGCTTACTTAC
EW737286       <-- AAGCCTGCAGTGGCTAAAGAAGCTATTGCAAATTAGAGATGCTTACTTAC
EY909682       <-- AAGCCTGCAGTGGCTAAAGAAGCTATTGCAAATTAGAGATGCTTACTTAC
FD528700       <-- AAGCCTGCAGTGGCTAAAGAAGCTATTGCAAATTAGAGATGCTTACTTAC
FD545850       <-- AAGCCTGCAGTGGCTAAAGAAGCTATTGCAAATTAGAGATGCTTACTTAC
FD567430       <-- AAGCCTGCAGTGGCTAAAGAAGCTATTGCAAATTAGAGATGCTTACTTAC
FD530387       <-- AAGCCT-CAGTGGCTAAAGAAGCTATTGCAAATTAGAGATGCTTACTTAC
FD554225       <-- AAGCCTGCAGTGGCTAAAGAAGCTATTGCAAATTAGAGATGCTTACTTAC
FD943891       <-- AAGCCTGCAGTGGCTAAAGAAGCTATTGCAAATTAGAGATGCTTACTTAC
FD530326       <-- AAGCCTGCAGTGGCTAAAGAAGCTATTGCAAATTAGAGATGCTTACTTAC
FD960797       <-- AAGCCTGCAGTGGCTAAAGAAGCTATTGCAAATTAGAGATGCTTACTTAC
EY917672       <-- AAGCCTGCAGTGGCTAAAGAAGCTATTGCAAATTAGAGATGCTTACTTAC
EY911423       <-- AAGCCTGCAGTGGCTAAAGAAGCTATTGCAAATTAGAGATGCTTACTTAC
EW724732       --> AAGCCTGCAGTGGCTAAAGAAGCTATTGCAAATTAGAGATGCTTACTTAC
EW724966       --> AAACCTGCAGTGGCTAAAGAAGCTATTGCAAATTAGAGATGCTTACTTAC
EX894500       --> AAACCTGCAGTGGCTAAAGAAGCTATTGCAAATTAGAGATGCTTACTTAC
EY923912       --> AAGCCTGCAGTGGCTAAAGAAGCTATTGCAAATTAGAGATGTTTACTTAC
EV536950       --> AAGCCTGCAGTGGCTAAAGAAGCTATTGCAAATTAGAGATGCTTACTTAC
FD973265       --> AAGCCTGCAGTGGCTAAAGAAGCTATTGCAAATTAGAGATGCTTACTTAC
EW723021       --> AAACCTGCAGTGGCTAAAGAAGCTATTGCAAATTAGAGATGCTTACTTAC
EW732608       --> AAGCCTGCAGTGGCTAAAGAAGCTATTGCAAATTAGAGATGCTTACTTAC
EY913457       --> AAGCCTGCAGTGGCTAAAGAAGCTATTGCAAATTAAAGATGCTTACTTAC
EY923901       --> AAGCCTGCAGTGGCTAAAGAAGCTATTGCAAATTAGAGATGCTTACTTAC
FD532149       --> AAGCCTGCAGTGGCTAAAGAAGCTATTGCAAATTAGAGATGCTTACTTAC
FD549826       --> AAGCCTGCAGTGGCTAAAGAAGCTATTGCAAATTAGAGATGCTTACTTAC
FD563773       --> AAGCCTGCAGTGGCTAAAGAAGCTATTGCAAATTAGAGATGCTTACTTAC
FD964923       --> ..................................................
FD534456       --> AAGCCT-CAGTGGCTAAAGAAGCTATTGCAA...................
FD558297       --> AAGCCTGCAGTGGCTAAAGAAGCTATTGCAAATTAGAGATGCTTACTTAC
FD948047       --> ..................................................
EY941293       --> AAACCTGCAGTGGCTAAAGAAGCTATTGCAAATTAGAGATGCTTACTTAC
FD534370       --> AAGCCTGCAGTGGCTAAAGAAGCTATTGCAAATTAGAGATGCTTACTTAC
EY921546       --> AAGCCTGCAGTGGCTAAAGAAGCTATTGCAAATTAGAGATGCTTACTTAC
EY915608       --> AAGCCTGCAGTGGCTAAAGAAGCTATTGCAAATTAGAGATGCTTACTTAC

               548    -    598
UN16210        --> TCAAGTCTCTCTCTTTTTA----ATTATCTTAAATCATGTATTACTTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW729177       <-- TCAAGTCTCTCTCTTTTTATTTAATTATCTTAAATCATGTATTACTTCCT  Raphanus sativus cv Early Scarlet Globe
EX898813       <-- TCAAGTCTCTCTCTTTTTA----ATTATCTTAAATCATGTATTACTTCCT  Raphanus sativus cv Early Scarlet Globe
EY919645       <-- TCAAGTCTCTCTCTTTTTATTTAATTATCTTAAATCATGTATTACTTCCT  Raphanus raphanistrum subsp. landra
EV541290       <-- CCAAGTCTCTCTCTTTTTA----ATTATCTTAAATCATGTATTACTTCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968989       <-- CCAAGTCTCTCTCTTTTTA----ATTATCTTAAATCATGTATTACTTCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW727827       <-- TCAAGTCTCTCTCTTTTTA----ATTATCTTAAATCATGTATTACTTCCT  Raphanus sativus cv Early Scarlet Globe
EW737286       <-- TCAAGTCTCTCTCTTTTTA----ATTATCTTAAATCATGTATTACTTCCT  Raphanus sativus cv Rat-Tail Radish #3870
EY909682       <-- TCAAGTGTCTCTCTTTTTA----ATTATCTTAAATCATGTATTACTTCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD528700       <-- TCAAGTCTCTCTCTTTTTA----ATTATCTTAAATCATGTATTACTTCCT  Raphanus raphanistrum subsp. maritimus
FD545850       <-- TCAAGTGTCTCTCTTTTTA----ATTATCTTAAATCATGTATTACTTCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD567430       <-- TCAAGTGTCTCTCTTTTTA----ATTATCTTAAATCATGTATTACTTCCT  Raphanus sativus var. oleiformis
FD530387       <-- TCAAGTGTCTCTCTTTT-A----ATTATCTTAAATCATGTATTACTTCCT  Raphanus raphanistrum subsp. maritimus
FD554225       <-- TCAAGTCTCCCTCTTTTTATTTAATTATCTTAAATCATGTATTACTTCCT  Raphanus raphanistrum subsp. landra
FD943891       <-- TCAAGTCTCTCTCTTTTTATTTAATTATCTTAAATCATGTATTACTTCCT  Raphanus sativus cv Early Scarlet Globe
FD530326       <-- TCAAGTGTCTCTCTTTTTA----ATTATCTTAAATCATGTATTACTTCCT  Raphanus raphanistrum subsp. maritimus
FD960797       <-- TCAAGTGTCTTTCTTTTTA----ATTATCTTAAATCATGTATTACTTCCT  Raphanus raphanistrum subsp. maritimus
EY917672       <-- TCAAGTCTCTCTCTTTTTATTTAATTATCTTAAATCATGTATTACTTCCT  Raphanus raphanistrum subsp. landra
EY911423       <-- TCAAGTGTCTCTCTTTTTA----ATTATCTTAAATCATGTATTACTTCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW724732       --> TCAAGTCTCTCTCTTTTTATTTAATTATCTTAAATCATGTATTACTTCCT  Raphanus sativus cv Early Scarlet Globe
EW724966       --> TCAAGTCTCTCTCTTTTTA----ATTATCTTAAATCATGTATTACTTCCT  Raphanus sativus cv Early Scarlet Globe
EX894500       --> TCAAGTCTCTCTCTTTTTA----ATTATCTTAAATCATGTATTACTTCCT  Raphanus sativus cv Early Scarlet Globe
EY923912       --> TCAAGTCTCTCTCTTTTTATTTAATTATCTTAAATCATGTATTACTTCCT  Raphanus raphanistrum subsp. landra
EV536950       --> CCAAGTCTCTCTCTTTTTA----ATTATCTTAAATCATGTATTACTTCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973265       --> CCAAGTCTCTCTCTTTTTA----ATTATCTTAAATCATGTATTACTTCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723021       --> TCAAGTCTCTCTCTTTTTA----ATTATCTTAAATCATGTATTACTTCCT  Raphanus sativus cv Early Scarlet Globe
EW732608       --> TCAAGTCTCTCTCTTTTTA----ATTATCTTAAATCATGTATTACTTCCT  Raphanus sativus cv Rat-Tail Radish #3870
EY913457       --> TCAAGTGTCTCTCTTTTTA----ATTATCTTAAATCATGTATTACTTCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY923901       --> TCAAGTCTCTCTCTTTTTA----ATTATCTTAAATCATGTATTACTTCCT  Raphanus raphanistrum subsp. landra
FD532149       --> TCAAGTCTCTCTCTTTTTA----ATTATCTTAAATCATGTATTACTTCCT  Raphanus raphanistrum subsp. maritimus
FD549826       --> TCAAGTGTCTCTCTTTTTA----ATTATCTTAAATCATGTATTACTTCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD563773       --> TCAAGTGTCTCTCTTTTTA----ATTATCTTAAATCATGTATTACTTCCT  Raphanus sativus var. oleiformis
FD964923       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD534456       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD558297       --> TCAAGTCTCCCTCTTTTTATTTAATTATCTTAAATCATGTATTACTTCCT  Raphanus raphanistrum subsp. landra
FD948047       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY941293       --> TCAAGTCTCTCTCTTTTTA----ATTATCTTAAATCATGTATTACTTCCT  Raphanus sativus cv Early Scarlet Globe
FD534370       --> TCAAGTGTCTCTCTTTTTA----ATTATCTTAAATCATGTATTACTTCCT  Raphanus raphanistrum subsp. maritimus
EY921546       --> TCAAGTCTCTCTCTTTTTATTTAATTATCTTAAATCATGTATTACTTCCT  Raphanus raphanistrum subsp. landra
EY915608       --> TCAAGTGTCTCTCTTTTTA----ATTATCTTAAATCATGTATTACTTCCT  Raphanus raphanistrum subsp. raphanistrum (NY)

               598    -    648
UN16210        --> ACATGTTATGCTTCATTTTATATTTTAATAAGATACTTTTCAGTCTAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW729177       <-- ACTTGCTATGCTTAATTTTCTACTTTAATAAGATACTTTTCAGTCT....  Raphanus sativus cv Early Scarlet Globe
EX898813       <-- ACATGTTATGCTTCATTTTATATTTTAATAAGATAATTTTCAGTCTAAAC  Raphanus sativus cv Early Scarlet Globe
EY919645       <-- ACATGTTATGCTTaat..................................  Raphanus raphanistrum subsp. landra
EV541290       <-- AAATGTTATGCTTCATTTCATATTTTAATAAGATACTTTTCAGTCc....  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968989       <-- AAATGTTATGCTTCATTTCATATTTTAATAAGATACTTTTCAGTCTAAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW727827       <-- ACATGTTATGCTTCATTTTATATTTTAATAAGATAATTTTCAGccg....  Raphanus sativus cv Early Scarlet Globe
EW737286       <-- ACATGTTATGCTTCATTTTATATTTTAATAAGATAATTTTCAGTCc....  Raphanus sativus cv Rat-Tail Radish #3870
EY909682       <-- ACATGTTATGCTTCATTTTATATTTTAATAAGATATTTTTCAGTCTAAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD528700       <-- ACATGTTATGCTTCATTTTATATTTTAATAAGATAATTTTCAGTCc....  Raphanus raphanistrum subsp. maritimus
FD545850       <-- ACATGTTATGCTTCATTTTATATTTTAATAAGATATTTTTCAGTCTAAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD567430       <-- ACATGTTATGCTTCATTTTATATTTTAATAAGATATTTTTCAGcc.....  Raphanus sativus var. oleiformis
FD530387       <-- ACATGTTATGCTTCATTTTATATTATAATAAG..................  Raphanus raphanistrum subsp. maritimus
FD554225       <-- ACATGTTATGCTTAATTTTCTACTTTAATAAGATACTTTTCAGTCTAAAC  Raphanus raphanistrum subsp. landra
FD943891       <-- ACATGTTATGCTTAATTTTCTACTTTAATAAGATACTTTTCAGTC.....  Raphanus sativus cv Early Scarlet Globe
FD530326       <-- ACATGTTATGCTTCATTTTATATTTTAATAAGATATTTTTCAGTCTAAAC  Raphanus raphanistrum subsp. maritimus
FD960797       <-- ACATGTTATGCTTCATTTTATATTTTAATAAGATATTTTTCAGTtt....  Raphanus raphanistrum subsp. maritimus
EY917672       <-- ACATGTTATGCTTAATTTTCTACTTTAATAAGATACTTTTCAGTCTAg..  Raphanus raphanistrum subsp. landra
EY911423       <-- ACATGTTATGCTTCATTTTATATTTTAATAAG..................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW724732       --> ACATGCTATGCTTAATTTTCTACTTTAATAAGATACTTTTCAGTCTAAAa  Raphanus sativus cv Early Scarlet Globe
EW724966       --> ACATGTTATGCT......................................  Raphanus sativus cv Early Scarlet Globe
EX894500       --> ACATGTTATGCTTCATTTTATATTTTAATAAGATAATTTTCAGTCTAAAC  Raphanus sativus cv Early Scarlet Globe
EY923912       --> ACATGTTATGCTTAATTTTCTACTTTAATAAGATACTTTTCAGTCTAAAa  Raphanus raphanistrum subsp. landra
EV536950       --> AAATGTTATGCTTCATTTCATATTTTAATAAGATACTTTTCAGTCc....  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973265       --> AAATGTTATGCTTCATTTCATATTTTAATAAGATACTTTTCAGTCTAAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723021       --> ACATGTTATGCTTCATTTTATATTTTAATAAGATAATTTTCAGccg....  Raphanus sativus cv Early Scarlet Globe
EW732608       --> ACATGTTATGCTTCATTTTATATTTTAATAAGATAATTTTCAGTCc....  Raphanus sativus cv Rat-Tail Radish #3870
EY913457       --> ACATGTTATGCTTCATTTTATATTT.........................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY923901       --> ACATGTTATGCTTCATTTTATATTTTAATAAGATAATTTTCAGTCTAAAC  Raphanus raphanistrum subsp. landra
FD532149       --> ACATGTTATGCTTCATTTTATATTTTAATAAGATAATTTTCAGTCc....  Raphanus raphanistrum subsp. maritimus
FD549826       --> ACATGTTATGCTTCATTTTATATTTTAATAAGATATTTTTCAGTCTAAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD563773       --> ACATGTTATGCTTCATTTTATATTTTAATAAGATATTTTTCAGccaaaaa  Raphanus sativus var. oleiformis
FD964923       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD534456       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD558297       --> ACATGTTATGCTTAATTTTCTACTTTAATAAGATACTTTTCAGTCTAAAC  Raphanus raphanistrum subsp. landra
FD948047       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY941293       --> ACATGTTATGCTTCATTTTATATTTTAATAAGATAATTTTCAGTCTAAAC  Raphanus sativus cv Early Scarlet Globe
FD534370       --> ACATGTTATGCTTCATTTTATATTTTAATAAGATATTTTTCAGTCTAAAC  Raphanus raphanistrum subsp. maritimus
EY921546       --> ACATGTTATGCTTAATTTTCTACTTTAATAAGATACTTTTCAGTCTAg..  Raphanus raphanistrum subsp. landra
EY915608       --> ACATGTTATGCTTCATTTTATATTTTAATAAG..................  Raphanus raphanistrum subsp. raphanistrum (NY)

               648    -    698
UN16210        --> CAACATAAACCGGAATATCTTTCACAAACCTATGGAACAAGCAAAGCTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW729177       <-- ..................................................
EX898813       <-- Cgacg.............................................
EY919645       <-- ..................................................
EV541290       <-- ..................................................
FD968989       <-- CAACATAAACCGGAATATCTTTCACAAACCc...................
EW727827       <-- ..................................................
EW737286       <-- ..................................................
EY909682       <-- C.................................................
FD528700       <-- ..................................................
FD545850       <-- C.................................................
FD567430       <-- ..................................................
FD530387       <-- ..................................................
FD554225       <-- C.................................................
FD943891       <-- ..................................................
FD530326       <-- C.................................................
FD960797       <-- ..................................................
EY917672       <-- ..................................................
EY911423       <-- ..................................................
EW724732       --> ..................................................
EW724966       --> ..................................................
EX894500       --> Cg................................................
EY923912       --> aa................................................
EV536950       --> ..................................................
FD973265       --> CAACATAAACCGGAATATCTTTCACAAACCcaaaaa..............
EW723021       --> ..................................................
EW732608       --> ..................................................
EY913457       --> ..................................................
EY923901       --> CGACATAAACCGGAATATCTTTCACAAACCTATGGAACAAGCAAAGCTGA
FD532149       --> ..................................................
FD549826       --> CAAaaaaaaa........................................
FD563773       --> ..................................................
FD964923       --> ..................................................
FD534456       --> ..................................................
FD558297       --> CAA...............................................
FD948047       --> ..................................................
EY941293       --> C.................................................
FD534370       --> C.................................................
EY921546       --> ..................................................
EY915608       --> ..................................................

               698    -    748
UN16210        --> GTTCTAAATGTCTTAGATCTGAACCTTTTGATGTTACATTTCACAGAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW729177       <-- ..................................................
EX898813       <-- ..................................................
EY919645       <-- ..................................................
EV541290       <-- ..................................................
FD968989       <-- ..................................................
EW727827       <-- ..................................................
EW737286       <-- ..................................................
EY909682       <-- ..................................................
FD528700       <-- ..................................................
FD545850       <-- ..................................................
FD567430       <-- ..................................................
FD530387       <-- ..................................................
FD554225       <-- ..................................................
FD943891       <-- ..................................................
FD530326       <-- ..................................................
FD960797       <-- ..................................................
EY917672       <-- ..................................................
EY911423       <-- ..................................................
EW724732       --> ..................................................
EW724966       --> ..................................................
EX894500       --> ..................................................
EY923912       --> ..................................................
EV536950       --> ..................................................
FD973265       --> ..................................................
EW723021       --> ..................................................
EW732608       --> ..................................................
EY913457       --> ..................................................
EY923901       --> GTTCTAAATGTCTTAGATCTGAACCTTTTGATGTTACATTTCACAGAAGC
FD532149       --> ..................................................
FD549826       --> ..................................................
FD563773       --> ..................................................
FD964923       --> ..................................................
FD534456       --> ..................................................
FD558297       --> ..................................................
FD948047       --> ..................................................
EY941293       --> ..................................................
FD534370       --> ..................................................
EY921546       --> ..................................................
EY915608       --> ..................................................

               748    -    798
UN16210        --> TACTT
                   ~~~~~
EW729177       <-- .....
EX898813       <-- .....
EY919645       <-- .....
EV541290       <-- .....
FD968989       <-- .....
EW727827       <-- .....
EW737286       <-- .....
EY909682       <-- .....
FD528700       <-- .....
FD545850       <-- .....
FD567430       <-- .....
FD530387       <-- .....
FD554225       <-- .....
FD943891       <-- .....
FD530326       <-- .....
FD960797       <-- .....
EY917672       <-- .....
EY911423       <-- .....
EW724732       --> .....
EW724966       --> .....
EX894500       --> .....
EY923912       --> .....
EV536950       --> .....
FD973265       --> .....
EW723021       --> .....
EW732608       --> .....
EY913457       --> .....
EY923901       --> TACTT
FD532149       --> .....
FD549826       --> .....
FD563773       --> .....
FD964923       --> .....
FD534456       --> .....
FD558297       --> .....
FD948047       --> .....
EY941293       --> .....
FD534370       --> .....
EY921546       --> .....
EY915608       --> .....