Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN16226

               1      -     51
UN16226        --> GCTTTAAACCTGCCTCTCCTAACTCACTGGGACCAAAAACTGATGGGGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772000       <-- .............................GGACCAAAA-CTGATGGG-CT
FD576509       <-- .................................................g
EX888702       <-- ..................................................
EY929730       <-- ..................................................
FD970877       <-- ..................................................
FD981384       <-- ..................................................
EY929185       <-- ..................................................
FD546160       --> GCTTTAAACCTGCCTCTCCTAACTCACTGGGACCAAAAACTGATGGGGCT
EX776053       --> ...........GCCTCTCCTAACCCACTGGGACCAAAAACTGATGGGGCT
EY925681       --> .........................................ggTGGGGCT
FD967132       --> ............................................GGGGCT
FD977159       --> ..................................................
EY926087       --> ..................................................
EX892598       --> ..................................................

               51     -    101
UN16226        --> CTTGGTGGTAAGATTAATGAAGTTATGATT-GTTATATGATCCAATGTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772000       <-- C-TGGTGGTAAGATTAATGAAGT-ATGAT--G-TATATGATCCAATGTAA
FD576509       <-- agctctggtatagaTAATGAAGT-ATGACT-GTTATACGATCCAATGTAA
EX888702       <-- ..................................................
EY929730       <-- ..................................................
FD970877       <-- ..................................................
FD981384       <-- ..................................................
EY929185       <-- ..................................................
FD546160       --> CTTGGTGGTAAGATTAATGAAGTTATGATT-GTTATATGATCCAATGTAA
EX776053       --> CTTGGTGGTAAGATTAATGAAGTTATGATT-GTTATATGATCCAATGTAA
EY925681       --> CTTGGTGGTAAGATTAATGAAGTTATGATT-GTTATATGATCCAATGTAA
FD967132       --> CTTGGTGGTAAGATTAATGAAGTTATGATT-GTTATATGATCCAATGTAA
FD977159       --> .........agGATTAATGAAGTTATGATTTGTTATATGATCCAATGTAA
EY926087       --> ...................................TATGATCCAATGTAA
EX892598       --> ..................................................

               101    -    151
UN16226        --> TATATAA-GCAGAGGCCATTACACAACAACATATAATAGTTTTTAAACCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772000       <-- TATATAA-GCAGAGGCCAT-ACACAACAACATATAATAGTTT--TAACCT
FD576509       <-- TATA-AA-GCAGAGGCCATTACACAACAACATATAATAGTTTT-AAACGT
EX888702       <-- ..................................................
EY929730       <-- ..................................................
FD970877       <-- ..................................................
FD981384       <-- ..................................................
EY929185       <-- ..................................................
FD546160       --> TATATAAAGCAGAGGCCATTACACAACAACATATAATAGTTTCTAAACCT
EX776053       --> TATATAA-GCAGAGGCCATTACACAACAACATATAATAGTTTTTAAACCT
EY925681       --> TATATAA-GCAGAGGCCATTACACAACAACATATAATAGTTTTTAAACCT
FD967132       --> TATATAA-GAAGAGGCCATTACACAACAACATATAATAGTTTTTAAACCT
FD977159       --> TATATAA-GCAGAGGCCATTACACAACAACATATAATAGTTTTTAAACCT
EY926087       --> TATATAA-GCAGAGGCCATTACACAACAACATATAATAGTTTTTAAACCT
EX892598       --> ..............GCCATTACACAACAACATATAATAGTTTTTAAACCT

               151    -    201
UN16226        --> AACGCGACAGTAGAGTCTTCCCGAGATCAATCAGCAGTTATCTTCAACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772000       <-- AACGCGACAGTAGAGTCTTCCCGAGATCAATCAGCAGTTATCTTCAACAG  Raphanus raphanistrum subsp. landra
FD576509       <-- AATGCGACAGTAGAGGCTTCCCGAGATCAAATAGCAGTTATCTTCAACAG  Raphanus sativus cv Rat-Tail Radish #3870
EX888702       <-- ..tGCGACAGTAGAG-C--TCCGAGATCAAATAGCAGT-ATCT-CA-CAG  Raphanus sativus var. oleiformis
EY929730       <-- ......................GAGATCA-TCAGCAGT-ATCTTCAACAG  Raphanus sativus var. oleiformis
FD970877       <-- .........................ATCAATCAGCAGTTATCT-CAACAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD981384       <-- ....................................GTTATCTTCAACAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY929185       <-- ..................................................  Raphanus sativus var. oleiformis
FD546160       --> AATGCGACAGTAGAGTCTTCTCGAGATCAAATAACAGTTATCTTCAACAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776053       --> AACGCGACAGTAGAGTCTTCCCGAGATCAATCAGCAGTTATCTTCAACAG  Raphanus raphanistrum subsp. landra
EY925681       --> AACGCGACAGTAGAGTCTTCCCGAGATCAATCAGCAGTTATCTTCAACAG  Raphanus sativus var. oleiformis
FD967132       --> AACGCGACAGTAGAGTCTTCCCGAGATCAATCAGCAGTTATCTTCAACAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD977159       --> AATGCGACAATAGAGTCTTCCCGAGATCAAATAACAGTTATCTTCAACAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY926087       --> AACGCGACAGTAGAGTCTTCCCGAGATCAATCAGCAGTTATCTTCAACAG  Raphanus sativus var. oleiformis
EX892598       --> AATGCGACAGTAGAGGCTTCCCGAGATCAAATAGCAGTTATCTTCAACAG  Raphanus sativus var. oleiformis

               201    -    251
UN16226        --> TCCATGTTCTTCACACTCCTCCTGCACAAAGCTCTCATCTCAACGTGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772000       <-- TCCATGTTCTTCACACTCCTCCTGCACAAAGCTCTCATCTCAACGTGGAG
FD576509       <-- TCCATGTTCTTCACACTCCTC-TGCACAAAGCTCTCATCTCAACGTGGAG
EX888702       <-- TCCATGT-CT-CACACTC-TCGTGCACAAAGCTCTCATCTCAACGTGGAG
EY929730       <-- TCCATGTTCTTCACACTCCTC-TGCACAAAGCTCTCATCCCAACGTGGAG
FD970877       <-- TCCATGTTCTTCACACTCCTC-TGCACAAAGCTCTCATCTCAACGTGGAG
FD981384       <-- TCCATGTTCTTCACACTTCTTCTGCTCAAAGCTCTCATCTCAACGTGGAG
EY929185       <-- ..................................................
FD546160       --> TCCATGTTCTTCACACTTCTCCTGCCCAAAGCTCTCATCTCAACGTGGAG
EX776053       --> TCCATGTTCTTCACACTCCTCCTGCACAAAGCTCTCATCTCAACGTGGAG
EY925681       --> TCCATGTTCTTCACACTCCTCCTGCACAAAGCTCTCATCTCAACGTGGAG
FD967132       --> TCCATGTTCTTCACACTCCTCCTGCACAAAGCTCTCATCTCAACGTGGAG
FD977159       --> TCCATGTTCTTCACACTTCTTCTGCTCAAAGCTCTCATCTCAACGTGGAG
EY926087       --> TCCATGTTCTTCACACTCCTCCTGCACAAAGCTCTCATCCCAACGTGGAG
EX892598       --> TCCATGTTCTTCACACTCCTCCTGCACAAAGCTCTCATCTCAACGTGGAG

               251    -    301
UN16226        --> TATGTGAGAAACTCCGTTGAAGTAAACTGAAATGGTTGGCGCGGAATAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772000       <-- TATGTGAGAAACTCCGTTGAAGTAAACTGAAATGGTTGGCGCGGAATAGG  Raphanus raphanistrum subsp. landra
FD576509       <-- TATGCGAGAAACTCCGTTGAAGTAAACTGAAATGGTTGGCGCGGAATAGG  Raphanus sativus cv Rat-Tail Radish #3870
EX888702       <-- TATGCGAGAAACTCCGTTGAAGTAAACTGAAATGGTTGGCGCGGAATAGG  Raphanus sativus var. oleiformis
EY929730       <-- TATGTGAGAAACTCCGTCGAAGTAAACTGAAATGGTTGGCGCGGAATAGG  Raphanus sativus var. oleiformis
FD970877       <-- TATGTGAGAAACTCCGTTGAAGTAAACTGAAATGGTTGGCGCGGAATAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD981384       <-- TATGTGAGAAACTCCGTCGAAGTAAACTGAAATGGTTGGCGCGGAATAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY929185       <-- ...................AAGTAAACTGAAATGGTTGGCGCGGAATAGG  Raphanus sativus var. oleiformis
FD546160       --> TATGTGAGAAACTCCGTTGAAGTAAACTGAAATGGTTGGCGCGGAATAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776053       --> TATGTGAGAAACTCCGTTGAAGTAAACTGAAATGGTTGGCGCGGAATAGG  Raphanus raphanistrum subsp. landra
EY925681       --> TATGTGAGAAACTCCGTCGAAGTAAACTGAAATGGTTGGCGCGGAATAGG  Raphanus sativus var. oleiformis
FD967132       --> TATGTGAGAAACTCCGTTGAAGTAAACTGAAATGGTTGGCGCGGAATAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD977159       --> TATGTGAGAAACTCCGTCGAAGTAAACTGAAATGGTTGGCGCGGAATAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY926087       --> TATGTGAGAAACTCCGTCGAAGTAAACTGAAATGGTTGGCGCGGAATAGG  Raphanus sativus var. oleiformis
EX892598       --> TATGCGAGAAACTCCGTTGAAGTAAACTGAAATGGTTGGCGCGGAATAGG  Raphanus sativus var. oleiformis

               301    -    351
UN16226        --> ATTCGGTCTAGGGCCATAAACTTTGATCTGACGGATATGAGTATCTCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772000       <-- ATTCGGTCTAGGGCCATAAACTTTGATCTGACGGATATGAGTATCTCTCC  Raphanus raphanistrum subsp. landra
FD576509       <-- ATTCGGTCTAGGGCCATAAACTTTGATCTGACGGATATGAGTATCTCTCC  Raphanus sativus cv Rat-Tail Radish #3870
EX888702       <-- ATTCGGTCTAGGGCCATAAACTTTGATCTGACGGATATGAGTATCTCTCC  Raphanus sativus var. oleiformis
EY929730       <-- GTTCGGTCTAGGGCCATAAACTTTGATCTGACGGATATGAGTATCTCTCC  Raphanus sativus var. oleiformis
FD970877       <-- GTTCGGTCTAGGGCCATAAACTTTGATCTGACGGATATGAGTATCTCTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD981384       <-- ATTCGGTCTAGGGCCATAAACTTTGATCTAACGGATATGAGTATCTCTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY929185       <-- GTTCGGTCTAGGGCCATAAACTTTGATCTGACGGATATGAGTATCTCTCC  Raphanus sativus var. oleiformis
FD546160       --> ATTCGGTCTAGGGCCATAAACTTTGATCTGACGGATATGAGTATCTCTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776053       --> ATTCGGTCTAGGGCCATAAACTTTGATCTGACGGATATGAGTATCTCTCC  Raphanus raphanistrum subsp. landra
EY925681       --> GTTCGGTCTAGGGCCATAAACTTTGATCTGACGGATATGAGTATCTCTCC  Raphanus sativus var. oleiformis
FD967132       --> GTTCGGTCTAGGGCCATAAACTTTGATCTGACGGATATGAGTATCTCTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD977159       --> ATTCGGTCTAGGGCCATAAACTTTGATCTAACGGATATGAGTATCTCTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY926087       --> GTTCGGTCTAGGGCCATAAACTTTGATCTGACGGATATGAGTATCTCTCC  Raphanus sativus var. oleiformis
EX892598       --> ATTCGGTCTAGGGCCATAAACTTTGATCTGACGGATATGAGTATCTCTCC  Raphanus sativus var. oleiformis

               351    -    401
UN16226        --> CGTTGAGGTGATTTGACAACATGGCTATTTGCAACATGAATGTATTCACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772000       <-- CGTTGAGGTGATTTGACAACATGGCTATTTGCAACATGAATGTATTCACA
FD576509       <-- CGTTGAGGTGATTTGACAACATGGCTATTTACAACATGAATGTATTCACA
EX888702       <-- CGTTGAGGTGATTTGACAACATGGCTATTTGCAACATGAATGTATTCACA
EY929730       <-- CGTTGAGGTGATTTGACAACATGGCTATTTGCAACATGAATGTATTCACA
FD970877       <-- CGTTGAGGTGATTTGACAACATGGCTATTTGCAACATGAATGTATTCACA
FD981384       <-- CGTTGAGGTGATTTGACAACATGGCTATTTGCAACATAAATGTATTCACA
EY929185       <-- CGTTGAGGTGATTTGACAACATGGCTATTTGCAGCATGAATGTATTCACA
FD546160       --> CGTTGAGGTGATTTGACAACATGGCTATTTGCAACATGAATGTATTCACA
EX776053       --> CGTTGAGGTGATTTGACAACATGGCTATTTGCAACATGAATGTATTCACA
EY925681       --> CGTTGAGGTGATTTGACAACATGGCTATTTGCAGCATGAATGTATTCACA
FD967132       --> CGTTGAGGTGATTTGACAACATGGCTATTTGCAACATGAATGTATTCACA
FD977159       --> CGTTGAGGTGATTTGACAACATGGCTATTTGCAACATAAATGTATTCACA
EY926087       --> CGTTGAGGTGATTTGACAACATGGCTATTTGCAACATGAATGTATTCACA
EX892598       --> CGTTGAGGTGATTTGACAACATGGCTATTTGCAACATGAATGTATTCACA

               401    -    451
UN16226        --> AATGTTTCCCTCGGATCGGTCCCAGACAAAGATACGGAAACCCAACCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772000       <-- AATGTTTCCCTCGGATCGGTCCCAGACAAAGATACGGAAACCCAACCAGA
FD576509       <-- AATGTTTCCCTCGGATCGGTCCCAGACAAAGATACGGAAACCCAACCAGA
EX888702       <-- AATGTTTCCCTCGGATCGGTCCCAGACAAAGATACGGAAACCCAACCAGA
EY929730       <-- AATGTTTCCCTTGGATCGGTCCCAGACAGAGATACGGAAACCCAACCAGA
FD970877       <-- AATGTCTCCCTCGGATCGGTCCCAGACAAAGATACGGAAACCCAACCAGA
FD981384       <-- AATGTTTCCCTCGGATCGGTCCCAGACAAAGATACGGAAACCCAACCAGA
EY929185       <-- AATGTTTCCCTTGGATCGGTCCCAGACAGAGATACGGAAACCCAACCAGA
FD546160       --> AATGTTTCCCTTGGATCAGTCCCAGACAGAGATACGGAAACCCAACCAGA
EX776053       --> AATGTTTCCCTCGGATCGGTCCCAGACAAAGATACGGAAACCCAACCAGA
EY925681       --> AATGTTTCCCTTGGATCGGTCCCAGACAGAGATACGGAAACCCAACCAGA
FD967132       --> AATGTCTCCCTCGGATCGGTCCCAGACAAAGATACGGAAACCCAACCAGA
FD977159       --> AATGTTTCCCTCGGATCGGTCCCAGACAAAGATACGGAAACCCAACCAGA
EY926087       --> AATGTTTCCCTTGGATCGGTCCCAGACAGAGATACGGAAACCCAACCAGA
EX892598       --> AATGTTTCCCTCGGATCGGTCCCAGACAAAGATACGGAAACCCAACCAGA

               451    -    501
UN16226        --> TGGCTTTACAAGCTCAACACTTTTTACCTCCTTTAAGTTATGAAAGCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772000       <-- TGGCTTTACAAGCTCAACACTTTTTACCTCCTTTAAGTTATGAAAGCCAT
FD576509       <-- TGGCTTTACAAGCTCAACACTTTTTACCTCCTTTAAGTTATGAAAGCCAT
EX888702       <-- TGGCTTTACAAGCTCAACACTTTTTACCTCCTTTAAGTTATGAAAGCCAT
EY929730       <-- TGGCTTTACAAGCTCAACACTTTTTACCTCCTTTAAGTTATGAAAGCCAT
FD970877       <-- TGGCTTTACAAGCTCAACACTTTTTACCTCCTTTAAGTTATGAAAGCCAT
FD981384       <-- TGGCTTTACAAGCTCAACACTTTTTACCTCCTTTAAGTTATGAAAGCCAT
EY929185       <-- TGGCTTTACAAGCTCAACACTTTTTACCTCCTTTAAGTTATGAAAGCCAT
FD546160       --> TGGCTTTACAAGCTCAACACTTTTTACCTCCTTTAAGTTATGAAAGCCAT
EX776053       --> TGGCTTTACAAGCTCAACACTTTTTACCTCCTTTAAGTTATGAAAGCCAT
EY925681       --> TGGCTTTACAAGCTCAACACTTTTTACCTCCTTTAAGTTATGAAAGCCAT
FD967132       --> TGGCTTTACAAGCTCAACACTTTTTACCTCCTTTAAGTTATGAAAGCCAT
FD977159       --> TGGCTTTACAAGCTCAACACTTTTTACCTCCTTTAAGTTATGAAAGCCAT
EY926087       --> TGGCTTTACAAGCTCAACACTTTTTACCTCCTTTAAGTTATGAAAGCCAT
EX892598       --> TGGCTTTACAAGCTCAACACTTTTTACCTCCTTTAAGTTATGAAAGCCAT

               501    -    551
UN16226        --> CACCAGCACGAACAGAGATCTTACTAGGCGTATAGCTCTCATCAAGCTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772000       <-- CACCAGCACGAACAGAGATCTTACTAGGCGTATAGCTCTCATCGAGCTTA  Raphanus raphanistrum subsp. landra
FD576509       <-- CACCAGCACGAACAGAGATCTTACTAGGCGTATAGCTCTCATCAAGCTTA  Raphanus sativus cv Rat-Tail Radish #3870
EX888702       <-- CACCAGCACGAACAGAGATCTTACTAGGCGTATAGCTCTCATCAAGCTTA  Raphanus sativus var. oleiformis
EY929730       <-- CACCAGCACGAACAGAGATCTTACTAGGCGTATAGCTCTCATCAAGCTTA  Raphanus sativus var. oleiformis
FD970877       <-- CACCAGCACGAACAGAGATCTTACTAGGCGTATAGCTCTCATCGAGCTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD981384       <-- CACCAGCACGAACAGAGATCTTACTAGGCGTATAGCTCTCATCAAGCTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY929185       <-- CACCAGCACGAACAGAGATCTTACTAGGCGTATAGCTCTCATCAAGCTTA  Raphanus sativus var. oleiformis
FD546160       --> CACCAGCACGAACAGAGATCTTACTAGGCGTATAGCTCTCATCAAGCTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776053       --> CACCAGCACGAACAGAGATCTTACTAGGCGTATAGCTCTCATCGAGCTTA  Raphanus raphanistrum subsp. landra
EY925681       --> CACCAGCACGAACAGAGATCTTACTAGGCGTATAGCTCTCATCAAGCTTA  Raphanus sativus var. oleiformis
FD967132       --> CACCAGCACGAACAGAGATCTTACTAGGCGTATAGCTCTCATCGAGCTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD977159       --> CACCAGCACGAACAGAGATCTTACTAGGCGTATAGCTCTCATCAAGCTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY926087       --> CACCAGCACGAACAGAGATCTTACTAGGCGTATAGCTCTCATCAAGCTTA  Raphanus sativus var. oleiformis
EX892598       --> CACCAGCACGAACAGAGATCTTACTAGGCGTATAGCTCTCATCAAGCTTA  Raphanus sativus var. oleiformis

               551    -    601
UN16226        --> AAGTCAACGTACAAAGCCACTAACTGTAATCTCACTTTCTTCTGGAACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772000       <-- AAGTCAACGTACAAAGCCACTAACTGTAATCTCA-ATTCTTCTGGAACTG
FD576509       <-- AAGTCAACGTACAAAGCCACTAACTGTAATCTCACTTTCTTCTGGAACTG
EX888702       <-- AAGTCAACGTACAAAGCCACTAACTGTAATCTCACTTTCTTCTGGAACTG
EY929730       <-- AAGTCAACGTACAAAGCCACTAACTGTAATCTCACTTTCTTCTGGAACTG
FD970877       <-- AAGTCAACGTACAAAGCCACTAACTGTAATCTCACTTTCTTCTGGAACTG
FD981384       <-- AAGTCAACGTACAAAGCCACTAACTGTAATCTCACTTTCTTCTGGAACTG
EY929185       <-- AAGTCAACGTACAAAGCCACTAACTGTAATCTCACTTTCTTCTGGAACTG
FD546160       --> AAGTCAACGTACAAAGCCACTAACTGTAATCTCACTTTCTTCTGGAATTG
EX776053       --> AAGTCAACGTACAAAGCCACTAACTGTAATCTCA-ATTCTTCTGGAACTG
EY925681       --> AAGTCAACGTACAAAGCCACTAACTGTAATCTCACTTTCTTCTGGAACTG
FD967132       --> AAGTCAACGTACAAAGCCACTAACTGTAATCTCACTTTCTTCTGGAACTG
FD977159       --> AAGTCAACGTACAAAGCCACTAACTGTAATCTCACTTTCTTCTGGAACTG
EY926087       --> AAGTCAACGTACAAAGCCACTAACTGTAATCTCACTTTCTTCTGGAACTG
EX892598       --> AAGTCAACGTACAAAGCCACTAACTGTAATCTCACTTTCTTCTGGAACTG

               601    -    651
UN16226        --> AATGTTGATCAAATGTGGTTGCAAACCATCCGATTGCCAATAGGTCTCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772000       <-- AATGTTGATCAAATGTGGTTGCAAACCATCCGATTGCCAATAGGTCTCGA  Raphanus raphanistrum subsp. landra
FD576509       <-- AATGTTAATCAAATGTGGCTGCAAACCATCCGATTGCCAATAGGTCTCGA  Raphanus sativus cv Rat-Tail Radish #3870
EX888702       <-- AATGTTGATCAAATGTGGTTGCAAACCATCCGATTGCCAATAGGTCTCGA  Raphanus sativus var. oleiformis
EY929730       <-- AATGTTGATCAAATGTGGTTGCAAACCATCCGATTGCCAATAGGTCTCGA  Raphanus sativus var. oleiformis
FD970877       <-- AATGTTAATCAAATGTGGCTGCAAACCATCCGATTGCCAATAGGTCTCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD981384       <-- AATGTTGATCAAATGTGGTTGCAAACCATCCGATTGCCAATAGGTCTCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY929185       <-- AATGTTGATCAAATGTGGTTGCAAACCATCCGATTGCCAATAGGTCTCGA  Raphanus sativus var. oleiformis
FD546160       --> AATGTTAATCAAATGCGGTTGCAAACCATCCGATTGCCAATAGGTCTCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776053       --> AATGTTGATCAAATGTGGTTGCAAACCATCCGATTGCCAATAGGTCTCGA  Raphanus raphanistrum subsp. landra
EY925681       --> AATGTTGATCAAATGTGGTTGCAAACCATCCGATTGCCAATAGGTCTCGA  Raphanus sativus var. oleiformis
FD967132       --> AATGTTAATCAAATGTGGCTGCAAACCATCCGATTGCCAATAGGTCTCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD977159       --> AATGTTGATCAAATGTGGTTGCAAACCATCCGATTGCCAATAGGTCTCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY926087       --> AATGTTGATCAAATGTGGTTGCAAACCATCCGATTGCCAATAGGTCTCGA  Raphanus sativus var. oleiformis
EX892598       --> AATGTTGATCAAATGTGGTTGCAAACCATCCGATTGCCAATAGGTCTCGA  Raphanus sativus var. oleiformis

               651    -    701
UN16226        --> GATTGTCGTCGCGGAGAGTGTTGACGCCGTTGCCGGGCTTGCAAGAGCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772000       <-- GATTGTCGTCGCGGAGAGTGTTGACGCCGTTGCCGGGCTTGCAAGAGCTA
FD576509       <-- GATTGTCGTCGCGGAGAGTGTTGACGCCGTTGCCGGGCTTGCAAGAGCTA
EX888702       <-- GATTGTCGTCGCGGAGAGTGTTGACGCCGTTGCCGGGCTTGCAAGAGCc.
EY929730       <-- GATTGTCGTCGCGGAGAGTGTTGACGCCGTTGCCGGGCTTGCAAGAGCTA
FD970877       <-- GATTGTCGTCGCGGAGAGTGTTGACGCCGTTGCCGGGCTTGCAAGAGCTG
FD981384       <-- GATTGTCGTCGCGGAGAGTGTTGACGCCGTTGCCGGGCTTGCAAGAGCTG
EY929185       <-- GATTGTCGTCGCGGAGAGTGTTGACGCCGTTGCCGGGCTTGCAAGAGCTA
FD546160       --> GATTG.............................................
EX776053       --> GATTGTCGTCGCGGAGAGTGTTGACGCCGTTGCCGGGCTTGCAAGAGCTA
EY925681       --> GATTGTCGTCGCGGAGAGTGTTGACGCCGTTGCCGGGCTTGCAAGAGCTA
FD967132       --> GATTGTCGTCGCGGAGAGTGTTGACGCCGTTGCCGGGCTTGCAAGAGCTG
FD977159       --> GATTGTCGTCGCGGA...................................
EY926087       --> GAatg.............................................
EX892598       --> GATTGTCGTCCCGGAGAGTGTTGACGCCGTTGCCGGGCTTGCAAGAGCc.

               701    -    751
UN16226        --> ACGCTCCAAGCTGCGTTTTTGCCCATCTCTCTCAGATCCTCGTCCACGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772000       <-- ACGCTCCAAGCTGCGTTTTTGCCCATCTCTCTCAGATCCTCGTCCACGAT  Raphanus raphanistrum subsp. landra
FD576509       <-- ACGCTCCAAGCTGCGTTTTTCCCCATCTCTCTCAGATCCTCGTCCACGAT  Raphanus sativus cv Rat-Tail Radish #3870
EX888702       <-- ..................................................  Raphanus sativus var. oleiformis
EY929730       <-- ACGCTCCAAGCTGCGTTTTTGCCCATCTCTCTCAGATCCTCGTCCACGAT  Raphanus sativus var. oleiformis
FD970877       <-- ACGCTCCAAGCTGCGTTTTTCCCCATCTCTCTCAGATCCTCGTCCACGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD981384       <-- ACGCTCCAGGCTGCGTTTTTCCCCATCTCTCTCAGATCGTCGTCCAAGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY929185       <-- ACGCTCCAAGCTGCGTTTTTGCCCATCTCTCTCAGATCCTCGTCCACGAT  Raphanus sativus var. oleiformis
FD546160       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776053       --> ACGCTCCAAGCTGCGTTTTTGCCCATCTCTCTCAGATCCTCGTCCACGAT  Raphanus raphanistrum subsp. landra
EY925681       --> ACGCT.............................................  Raphanus sativus var. oleiformis
FD967132       --> ACGCTCCAAGCTGCGTTTTTCCCCATCTCTCTCAGATCCTCGTCCACGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD977159       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY926087       --> ..................................................  Raphanus sativus var. oleiformis
EX892598       --> ..................................................  Raphanus sativus var. oleiformis

               751    -    801
UN16226        --> TAGCTTCTCGTTTCCTCCGCTGATCTTCCCTTCTTCCTCCGATTCCGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772000       <-- TAGCTTCTCGTTTCCTCCGCTGATCTTCCCTTCTTCCTCCGATTCCGATG
FD576509       <-- TAGCTTCTCGTTTCCTCCGCCGATCTTCCCTTCTTCCTCCGATTCCGATG
EX888702       <-- ..................................................
EY929730       <-- TAGCTTCTCGTTTCCTCCGCTGATCTTCCCTTCTTC--CCGATTCCGATG
FD970877       <-- TAGCTTCTCGTTTCCTCCACTGATCTTCCCTTCTTCCTCCGATTCCGATG
FD981384       <-- TAGCTTCTCGTTTCCTCCGCTGATCTTCCCTTCTTCCTCCGATTCCGATG
EY929185       <-- TAGCTTCTCGTTTCCTCCGCTGATCTTCCCTTCTTCCTCCGATTCCGATG
FD546160       --> ..................................................
EX776053       --> TAGCTTCTCGTTTCCTCCGCTGATCTTCCCTTCTTCCTCCGATTCCGATG
EY925681       --> ..................................................
FD967132       --> TAGCTTCTCGTTTCCTCCACTGA...........................
FD977159       --> ..................................................
EY926087       --> ..................................................
EX892598       --> ..................................................

               801    -    851
UN16226        --> ACTCCGTCGCCATATCTAATCTCCGATGTCAAACACTTTTTTTT--GTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772000       <-- ACTCCGTCGCCATATCTAATCTCCGATGTCAAACACTTTTTTTT--GTTG
FD576509       <-- ACTCCGTCc.........................................
EX888702       <-- ..................................................
EY929730       <-- ACTCCGTCGCCATATCTAATCTCCGATGTCAAACACTTTTTTTT--GTTc
FD970877       <-- ACTCCGTCGCCATATCTAATCTCCGATGCCAAACACTTTTTTTT--GTTG
FD981384       <-- ACTCCGTCGCCATGTCTAATCTCCGATGTCAAACACTTTTTTTTTTGTTG
EY929185       <-- ACTCCGTCGCCATATCTAATCTCCGATGTCAAACACTTTTTTTT--GTTG
FD546160       --> ..................................................
EX776053       --> ACTCCGTCGCCATATC..................................
EY925681       --> ..................................................
FD967132       --> ..................................................
FD977159       --> ..................................................
EY926087       --> ..................................................
EX892598       --> ..................................................

               851    -    901
UN16226        --> CTAAAACCCTCTAGACGAGGGTTTGAATTCGTCTTTATGGATCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772000       <-- CTcc.........................................
FD576509       <-- .............................................
EX888702       <-- .............................................
EY929730       <-- c............................................
FD970877       <-- CTcc.........................................
FD981384       <-- CTAAAACCCTCTAGACG............................
EY929185       <-- CTAAAACCCTCTAGACGAGGGTTTGAATTCGTCTTTATGGATCCC
FD546160       --> .............................................
EX776053       --> .............................................
EY925681       --> .............................................
FD967132       --> .............................................
FD977159       --> .............................................
EY926087       --> .............................................
EX892598       --> .............................................