1      -     51
UN16230        --> TTTTTTTGAATCAAAAATCTCTGGAGTTTTTAAATCATTAAATCCAAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD549885       <-- TTTTTTTGAATCAAAAATCTCTGGAGTTTTTAAATCATTAAATCCAAACA
FD979602       <-- ...TTTTTAATCAAAAATCTCTGGAGTTTT-AAATCATTAAATCCAAACA
EX765090       <-- ........agTCAAAAATCTCTGGAGTTTTTAAATCATTAAATCCAAACA
EV568888       <-- ...............AATCTCTGGAGTTTTTAAATCATTAAATCCAAACA
EV568975       <-- ...............AATCTCTGGAGTTTTTAAATCATTAAATCCAAACA
FD972356       <-- ..................................................
FD578899       <-- ..................................................
FD545904       --> .......GAATCAAAAATCTCTGGAGTTTTTAAATCATTAAATCCAAACA
FD975617       --> ........AATCAAAAATCTCTGGAGTTTTTAAATCATTAAATCCAAACA
EX768895       --> ........agTCAAAAATCTCTGGAGTTTTTAAATCATTAAATCCAAACA
EV573514       --> ...............AATCTCTGGAGTTTTTAAATCATTAAATCCAAACA
EV573586       --> ...............AATCTCTGGAGTTTTTAAATCATTAAATCCAAACA
FD968261       --> ..................................................

               51     -    101
UN16230        --> GAACACAAGAATAATAATAATAATAAACATAACAAGACAAAGAAACTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD549885       <-- GAACACAAGAATAATAATAATAATAAACATAACAAGACAAAGAAACTCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979602       <-- GAACACAAGAATAATAATAATAATAAACATAACAAGACAAAGAAACTCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765090       <-- GAACACAAGAATAATAATAATAATAAACATAACAAGACAAAGAAACTCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV568888       <-- GAACACAAGAATAATGATAATAATAAACATAACAAGACAAAGAAACTCTC  Raphanus raphanistrum subsp. landra
EV568975       <-- GAACACAAGAATAATGATAATAATAAACATAACAAGACAAAGAAACTCTC  Raphanus raphanistrum subsp. landra
FD972356       <-- .....CAAGAATAATAATAATAATAAACATAACAAGACAAAGAAACTCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD578899       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD545904       --> GAACACAAGAATAATAATAATAATAAACATAACAAGACAAAGAAACTCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD975617       --> GAACACAAGAATAATAATAATAATAAACATAACAAGACAAAGAAACTCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768895       --> GAACACAAGAATAATAATAATAATAAACATAACAAGACAAAGAAACTCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573514       --> GAACACAAGAATAATGATAATAATAAACATAACAAGACAAAGAAACTCTC  Raphanus raphanistrum subsp. landra
EV573586       --> GAACACAAGAATAATGATAATAATAAACATAACAAGACAAAGAAACTCTC  Raphanus raphanistrum subsp. landra
FD968261       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               101    -    151
UN16230        --> TGAACAAAAGACCCTTTCAAAAGGAAACTTCAACAGTTTATTGTCAAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD549885       <-- TGAACAAAAGACCCTTTCAAAAGGAAACTTCAACAGTTTATTGTCAAGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979602       <-- TGAACAAAAGACCCTTTCA--AGGAAACTTCAACAGTTTATTGTCAAGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765090       <-- TGAACAAAAGACCCTTTCAAAAGGAAACTTCAACAGTTTATTGTCAAGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV568888       <-- TGAACAAAAGACCCCTTCAAAAGGAAACTTCAACAGTTTATTGTTAAGAC  Raphanus raphanistrum subsp. landra
EV568975       <-- TGAACAAAAGACCCCTTCAAAAGGAAACTTCAACAGTTTATTGTTAAGAC  Raphanus raphanistrum subsp. landra
FD972356       <-- TGAACAAAAGACCCTTTCAAAAGGAAACTTCAACAGTTTATTGCCAAGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD578899       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD545904       --> TGAACAAAAGACCCTTTCAAAAGGAAACTTCAACAGTTTATTGTCAAGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD975617       --> TGAACAAAAGACCCTTTCAA--GGAAACTTCAACAGTTTATTGTCAAGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768895       --> TGAACAAAAGACCCTTTCAAAAGGAAACTTCAACAGTTTATTGTCAAGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573514       --> TGAACAAAAGACCCCTTCAAAAGGAAACTTCAACAGTTTATTGTTAAGAC  Raphanus raphanistrum subsp. landra
EV573586       --> TGAACAAAAGACCCCTTCAAAAGGAAACTTCAACAGTTTATTGTTAAGAC  Raphanus raphanistrum subsp. landra
FD968261       --> ...ACAAAAGACCCTTTCAAAAGGAAACTTCAACAGTTTATTGCCAAGAC  Raphanus raphanistrum subsp. raphanistrum (MS)

               151    -    201
UN16230        --> TCAGAATGAAAACAGTAAACA-CACACATTTGGTGTTTTTGATCTCTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD549885       <-- TC-GAACGAAAACAGTAAACA-CACACATTTGGTGTTTTTGATCTCTTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979602       <-- TC-GAACGAAAACAGTAAACA-CACACATTTGGTGTTTTTGATCTCTTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765090       <-- TC-GAACGAAAACAGTAAACA-CACACATTTGGTGTTTTTGATCTCTTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV568888       <-- TCAAAATGCAAACAGTAAACAACACACATTTGGTGTTTTTGATCTCTTTA  Raphanus raphanistrum subsp. landra
EV568975       <-- TCAAAATGCAAACAGTAAACAACACACATTTGGTGTTTTTGATCTCTTTA  Raphanus raphanistrum subsp. landra
FD972356       <-- TCAAAATGAAA-CAGTAAACA-CACACATTTGGTGTTTTTGATCTCTTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD578899       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD545904       --> TC-GAACGAAAACAGTAAACA-CACACATTTGGTGTTTTTGATCTCTTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD975617       --> TC-GAACGAAAACAGTAAACA-CACACATTTGGTGTTTTTGATCTCTTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768895       --> TC-GAACGAAAACAGTAAACA-CACACATTTGGTGTTTTTGATCTCTTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573514       --> TCAAAATGCAAACAGTAAACAACACACATTTGGTGTTTTTGATCTCTTTA  Raphanus raphanistrum subsp. landra
EV573586       --> TCAAAATGCAAACAGTAAACAACACACATTTGGTGTTTTTGATCTCTTTA  Raphanus raphanistrum subsp. landra
FD968261       --> TCAAAATGAAA-CAGTAAACA-CACACATTTGGTGTTTTTGATCTCTTTA  Raphanus raphanistrum subsp. raphanistrum (MS)

               201    -    251
UN16230        --> ATTAGTAAGAAGCTTCAGAATTTTTCCAGCCTCCATAAGACTCCTCTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD549885       <-- ATTAGTAAGAAGCTTCAGAATTTTTCCAGCCTCCATAAGACTCCTCTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979602       <-- ATTAGTAAGAAGCTTCAGAATTTTTCCAGCCTCCATAAGACTCCTCTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765090       <-- ATTAGTAAGAAGCTTCAGAATTTTTCCAGCCTCCATAAGACTCCTCTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV568888       <-- ATTAGTAAGAAGCTTCAGAGTTTTTCCAGCCTCCATAAGACTCCTCTTCA  Raphanus raphanistrum subsp. landra
EV568975       <-- ATTAGTAAGAAGCTTCAGAGTTTTTCCAGCCTCCATAAGACTCCTCTTCA  Raphanus raphanistrum subsp. landra
FD972356       <-- ATTAGTAAGAAGCTTCAGAGTTCTTCCAGCCTCCATAAGACTCCTCTTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD578899       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD545904       --> ATTAGTAAGAAGCTTCAGAATTTTTCCAGCCTCCATAAGACTCCTCTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD975617       --> ATTAGTAAGAAGCTTCAGAATTTTTCCAGCCTCCATAAGACTCCTCTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768895       --> ATTAGTAAGAAGCTTCAGAATTTTTCCAGCCTCCATAAGACTCCTCTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573514       --> ATTAGTAAGAAGCTTCAGAGTTTTTCCAGCCTCCATAAGACTCCTCTTCA  Raphanus raphanistrum subsp. landra
EV573586       --> ATTAGTAAGAAGCTTCAGAGTTTTTCCAGCCTCCATAAGACTCCTCTTCA  Raphanus raphanistrum subsp. landra
FD968261       --> ATTAGTAAGAAGCTTCAAAGTTCTTCCAGCCTCCATAAGACTCCTCTTCA  Raphanus raphanistrum subsp. raphanistrum (MS)

               251    -    301
UN16230        --> AAACCCCTGCTTCGGTTTTCCGAAGGTTTGAAGGAGAGTGCGATCCAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD549885       <-- AAACCCCTGCTTCGATTTTCCGAAGGTTTGAAGGAGAGTGCGATCCAGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979602       <-- AAACCCCTGCTTCGATTTTCCGAAGGTTTGAAGGAGAGTGCGATCCAGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765090       <-- AAACCCCTGCTTCGATTTTCCGAAGGTTTGAAGGAGAGTGCGATCCAGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV568888       <-- AACCCCATGCTTCGGTTTTCCGAAGGTTTGAAGGAGAGTGCGATCCAGAT  Raphanus raphanistrum subsp. landra
EV568975       <-- AACCCCATGCTTCGGTTTTCCGAAGGTTTGAAGGAGAGTGCGATCCAGAT  Raphanus raphanistrum subsp. landra
FD972356       <-- AACCCCCTGCTTCGGTTTTCCGAAGGTTTGAAGGAGAGTGCGATCCAGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD578899       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD545904       --> AAACCCCTGCTTCGATTTTCCGAAGGTTTGAAGGAGAGTGCGATCCAGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD975617       --> AAACCCCTGCTTCGATTTTCCGAAGGTTTGAAGGAGAGTGCGATCCAGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768895       --> AAACCCCTGCTTCGATTTTCCGAAGGTTTGAAGGAGAGTGCGATCCAGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573514       --> AACCCCATGCTTCGGTTTTCCGAAGGTTTGAAGGAGAGTGCGATCCAGAT  Raphanus raphanistrum subsp. landra
EV573586       --> AACCCCATGCTTCGGTTTTCCGAAGGTTTGAAGGAGAGTGCGATCCAGAT  Raphanus raphanistrum subsp. landra
FD968261       --> AACCCCCTGCTTCGGTTTTCCGAAGGTTTGAAGGAGAGTGCGATCCAGAT  Raphanus raphanistrum subsp. raphanistrum (MS)

               301    -    351
UN16230        --> CTCGCCTTTGAACTCTCCATCTTTCACCACATTGTATGCACTTGGTGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD549885       <-- CTCGCCTTTGAACTCTCCATCTTTCACCACATTGTATGCACTTGGTGGGA
FD979602       <-- CTCGCCTTTGAACTCTCCATCTTTCACCACATTGTATGCACTTGGTGGGA
EX765090       <-- CTCGCCTTTGAACTCTCCATCTTTCACCACATTGTATGCACTTGGTGGGA
EV568888       <-- CTCGCCTTTGAACTCTCCATCTTTCACCACATTGTATGCACTTGGTGGGA
EV568975       <-- CTCGCCTTTGAACTCTCCATCTTTCACCACATTGTATGCACTTGGTGGGA
FD972356       <-- CTCGCCTTTGAACTCTCCATCTTTCACCACATTGTATGCACTTGGTGGGA
FD578899       <-- ..................................................
FD545904       --> CTCGCCTTTGAACTCTCCATCTTTCACCACATTGTATGCACTTGGTGGGA
FD975617       --> CTCGCCTTTGAACTCTCCATCTTTCACCACATTGTATGCACTTGGTGGGA
EX768895       --> CTCGCCTTTGAACTCTCCATCTTTCACCACATTGTATGCACTTGGTGGGA
EV573514       --> CTCGCCTTTGAACTCTCCATCTTTCACCACATTGTATGCACTTGGTGGGA
EV573586       --> CTCGCCTTTGAACTCTCCATCTTTCACCACATTGTATGCACTTGGTGGGA
FD968261       --> CTCGCCTTTGAACTCTCCATCTTTCACCACATTGTATGCACTTGGTGGGA

               351    -    401
UN16230        --> TCTCTCCTTCCAAGAAAACCGCCTCCAATGGAAGGGTTGCTTCACCAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD549885       <-- TCTCTCCTTCCAAGAAAACCGCCTCCAATGGAAGGGTTGCTTCACCAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979602       <-- TCTCTCCTTCCAAGAAAACCGCCTCCAATGGAAGGGTTGCTTCACCAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765090       <-- TCTCTCCTTCCAAGAAAACCGCCTCCAATGGAAGGGTTGCTTCACCAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV568888       <-- TCTCTCCTTCCAAGAAAACCGGCTCCAATGGAAGGGTTGCTTCACCAACA  Raphanus raphanistrum subsp. landra
EV568975       <-- TCTCTCCTTCCAAGAAAACCGGCTCCAATGGAAGGGTTGCTTCACCAACA  Raphanus raphanistrum subsp. landra
FD972356       <-- TCTCTCCTTCCAAGAAAACCGCCTCCAATGGAAGGGTTGCTTCACCAACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD578899       <-- ...CTCCTTCCAAGAAAACCGGCTCCAATGGAAGGGTTGCTTCACCAACA  Raphanus sativus cv Rat-Tail Radish #3870
FD545904       --> TCTCTCCTTCCAAGAAAACCGCCTCCAATGGAAGGGTTGCTTCACCAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD975617       --> TCTCTCCTTCCAAGAAAACCGCCTCCAATGGAAGGGTTGCTTCACCAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768895       --> TCTCTCCTTCCAAGAAAACCGCCTCCAATGGAAGGGTTGCTTCACCAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573514       --> TCTCTCCTTCCAAGAAAACCGGCTCCAATGGAAGGGTTGCTTCACCAACA  Raphanus raphanistrum subsp. landra
EV573586       --> TCTCTCCTTCCAAGAAAACCGGCTCCAATGGAAGGGTTGCTTCACCAACA  Raphanus raphanistrum subsp. landra
FD968261       --> TCTCTCCTTCCAAGAAAACCGCCTCCAATGGAAGGGTTGCTTCACCAACA  Raphanus raphanistrum subsp. raphanistrum (MS)

               401    -    451
UN16230        --> TGATCATCCTCTGTGCCAACATCTTTGTCAAAGATTTTGGCTTTTAGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD549885       <-- TGATCATCCTCTGTGCCAACATCTTTGTCAAAGATTTTGGCTTTTAGCTC
FD979602       <-- TGATCATCCTCTGTGCCAACATCTTTGTCAAAGATTTTGGCTTTTAGCTC
EX765090       <-- TGATCATCCTCTGTGCCAACATCTTTGTCAAAGATTTTGGCTTTTAGCTC
EV568888       <-- TGATCATCCTCTGTGCCAACATCTTTGTCAAAGATTTTGGCTTTTAGCTC
EV568975       <-- TGATCATCCTCTGTGCCAACATCTTTGTCAAAGATTTTGGCTTTTAGCTC
FD972356       <-- TGATCATCCTCAGTGCCAACATCTTTGTCAAAGATTTTGGCTTTTAGCTC
FD578899       <-- TGATCATCCTCAGTGCCAACATCTTTGTCAAAGATTTTGGCTTTTAGCTC
FD545904       --> TGATCATCCTCTGTGCCAACATCTTTGTCAAAGATTTTGGCTTTTAGCTC
FD975617       --> TGATCATCCTCTGTGCCAACATCTTTGTCAAAGATTTTGGCTTTTAGCTC
EX768895       --> TGATCATCCTCTGTGCCAACATCTTTGTCAAAGATTTTGGCTTTTAGCTC
EV573514       --> TGATCATCCTCTGTGCCAACATCTTTGTCAAAGATTTTGGCTTTTAGCTC
EV573586       --> TGATCATCCTCTGTGCCAACATCTTTGTCAAAGATTTTGGCTTTTAGCTC
FD968261       --> TGATCATCCTCAGTGCCAACATCTTTGTCAAAAATTTTGGCTTTTAGCTC

               451    -    501
UN16230        --> TGTTGTTCCTTCAGAGACATTGAAGATAAATGTCTCGTTCCATTCTGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD549885       <-- TGTTGTTCCTTCAGAGACATTGAAGATAAATGTCTCGTTCCATTCTGGAG
FD979602       <-- TGTTGTTCCTTCAGAGACATTGAAGATAAATGTCTCGTTCCATTCTGGAG
EX765090       <-- TGTTGTTCCTTCAGAGACATTGAAGATAAATGTCTCGTTCCATTCTGGAG
EV568888       <-- TGTTGTTCCTTCAGAGACATTGAAGATAAATGTCTCGTTCCATTCTGGAG
EV568975       <-- TGTTGTTCCTTCAGAGACATTGAAGATAAATGTCTCGTTCCATTCTGGAG
FD972356       <-- TGTCGTTCCTTCAGAGACATTGAAGATAAATGTCTCGTTCCATTCTGGAG
FD578899       <-- TGTTGTTCCTTCAGAGACATTGAAGATAAATGTCTCGTTCCATTCTGGAG
FD545904       --> TGTTGTTCCTTCAGAGACATTGAAGATAAATGTCTCGTTCCATTCTGGAG
FD975617       --> TGTTGTTCCTTCAGAGACATTGAAGATAAATGTCTCGTTCCATTCTGGAG
EX768895       --> TGTTGTTCCTTCAGAGACATTGAAGATAAATGTCTCGTTCCATTCTGGAG
EV573514       --> TGTTGTTCCTTCAGAAACATTGAAGATAAATGTCTCGTTCCATTCTGGAG
EV573586       --> TGTTGTTCCTTCAGAGACATTGAAGATAAATGTCTCGTTCCATTCTGGAG
FD968261       --> TGTCGTTCCTTCAAAAACATTGAAAATAAATGTCTCGTTCCATTCTGGAG

               501    -    551
UN16230        --> TCGTGCCTTGTCCTGATGCGACATTGCTCTTCTGATCTTGAGTCCGACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD549885       <-- TCGTGCCTTGTCCTGATGCAACATTGCTCTTCTGATCTTGAGTCCGACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979602       <-- TCGTGCCTTGTCCTGATGCAACATTGCTCTTCTGATCTTGAGTCCGACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765090       <-- TCGTGCCTTGTCCTGATGCAACATTGCTCTTCTGATCTTGAGTCCGACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV568888       <-- TCGTGCCTTGTCCTGATGCGACATTGCTCTTCTGATCTTGAGTCCGACAA  Raphanus raphanistrum subsp. landra
EV568975       <-- TCGTGCCTTGTCCTGATGCGACATTGCTCTTCTGATCTTGAGTCCGACAA  Raphanus raphanistrum subsp. landra
FD972356       <-- TCGTGCCTTGTCCTGATGCGACATTGCTCTTCTGATCTTGAGTCCGACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD578899       <-- TCGTGCCTTGTCCTGATGCGACATTGCTCTTCTGATCTTGAGTCCGACAA  Raphanus sativus cv Rat-Tail Radish #3870
FD545904       --> TCGTGCCTTGTCCTGATGCAACATTGCTCTTCTGATCTTGAGTCCGACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD975617       --> TCGTGCCTTGTCCTGATGCAACATTGCTCTTCTGATCTTGAGTCCGACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768895       --> TCGTGCCTTGTCCTGATGCAACATTGCTCTTCTGATCTTGAGTCCGACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573514       --> TCGTGCCTTGTCCTGATGCGACATTGCTCTTCTGATCTTGAGTCCGACAA  Raphanus raphanistrum subsp. landra
EV573586       --> TCGTGCCTTGTCCTGATGCGACATTGCTCTTCTGATCTTGAGTCCGACAA  Raphanus raphanistrum subsp. landra
FD968261       --> TCGTGCCTTGTCCTGATGCGACATTGCTCTTCTGATCTTGAGTCCGACAA  Raphanus raphanistrum subsp. raphanistrum (MS)

               551    -    601
UN16230        --> GTGAATTGCACATAAGGATCCATGCTGTTCAGAAAATCTGTGTCCTCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD549885       <-- GTGAATTGCACATAAGGATCCATGCTATTCAGAAAATCTGTGTCCTCAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979602       <-- GTGAATTGCACATAAGGATCCATGCTATTCAGAAAATCTGTGTCCTCAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765090       <-- GTGAATTGCACATAAGGATCCATGCTATTCAGAAAATCTGTGTCCTCAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV568888       <-- GTGAATTGCACATAAGGATCAATGCTGTTCAGAAAATCTGTGTCCTCAAG  Raphanus raphanistrum subsp. landra
EV568975       <-- GTGAATTGCACATAAGGATCAATGCTGTTCAGAAAATCTGTGTCCTCAAG  Raphanus raphanistrum subsp. landra
FD972356       <-- GTGAATTGCACATAAGGATCCATGCTGTTCAGAAAATCTGTGTCCTCAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD578899       <-- GTGAATTGCACATAAGGATCCATGCTGTTCAGAAAATCTGTGTCCTCAAG  Raphanus sativus cv Rat-Tail Radish #3870
FD545904       --> GTGAATTGCACATAAGGATCCATGCTATTCAGAAAATCTGTGTCCTCAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD975617       --> GTGAATTGCACATAAGGATCCATGCTATTCAGAAAATCTGTGTCCTCAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768895       --> GTGAATTGCACATAAGGATCCATGCTATTCAGAAAATCTGTGTCCTCAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573514       --> GTGAATTGCACATAAGGATCAATGCTGTTCAGAAAATCTGTGTCCTCAAG  Raphanus raphanistrum subsp. landra
EV573586       --> GTGAATTGCACATAAGGATCAATGCTGTTCAGAAAATCTGTGTCCTCAAG  Raphanus raphanistrum subsp. landra
FD968261       --> GTGAATTGCACATAAGGATCCATGCTGTTCAAAAAATCTGTGTCCTCAAG  Raphanus raphanistrum subsp. raphanistrum (MS)

               601    -    651
UN16230        --> TCCTTTGGCGCTGACAAGAACAACTTCAAGAGTTCCATGAGGCATCTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD549885       <-- TCCTTTGGCGCTGACAAGAACAACTTCAAGAGTTCCGTGAGGCATCTTTC
FD979602       <-- TCCTTTGGCGCTGACAAGAACAACTTCAAGAGTTCCATGAGGCATCTTTC
EX765090       <-- TCCTTTGGCGCTGACAAGAACAACTTCAAGAGTTCCATGAGGCATCTTTC
EV568888       <-- TCCTTTGGCGCTGACAAGAACAACTTCAAGAGTTCCATGAGGCATCTTTC
EV568975       <-- TCCTTTGGCGCTGACAAGAACAACTTCAAGAGTTCCATGAGGCATCTTTC
FD972356       <-- TCCTTTGGCGCTGACAAGAACAACTTCAAGAGTTCCATGAGGCATCTTTC
FD578899       <-- TCCTTTGGCGCTGACAAGAACAACTTCAAGAGTTCCATG...........
FD545904       --> TCCTTTGGCGCTGACAAGAACAACTTCAAGAGTTCCGTGAGGCATCTTTC
FD975617       --> TCCTTTGGCGCTGACAAGAACAACTTCAAGAGTTCCATGAGGCATCTTTC
EX768895       --> TCCTTTGGCGCTGACAAGAACAACTTCAAGAGTTCCATGAGGCATCTTTC
EV573514       --> TCCTTTGGCGCTGACAAGAACAACTTCAAGAGTTCCATGAGGCATCTTTC
EV573586       --> TCCTTTGGCGCTGACAAGAACAACTTCAAGAGTTCCATGAGGCATCTTTC
FD968261       --> TCCTTTGGCGCTGACAAGAACAACTTCAAGAGTTCCATGAGGCATCTTTC

               651    -    701
UN16230        --> TTCTCTCTTCTTGTCTGTTTTTCTTTTTTGTTTAATTGTCAGAGAAAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD549885       <-- TTCTCTCTTCTc......................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979602       <-- TTCTCTCTTCTTGTCTGTTTTTCTTTTTTGTTTAATTGTCAGAGAAAAaa  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765090       <-- TTCTCTCTTCTTGTCTGTTTTTCTTTTTTGTTTAATTGTCAGAGAAAATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV568888       <-- TTCTCTCTTCTTCTCTGTTTTTCTTTTTTtgtttcacc............  Raphanus raphanistrum subsp. landra
EV568975       <-- TTCTCTCTTCTTCTCTGTTTTTCTTTTTTtgtttcacc............  Raphanus raphanistrum subsp. landra
FD972356       <-- TTCTCTCTTCTTGTCTGTTTTTCTTTTTTGTTTAATTGTCAGcc......  Raphanus raphanistrum subsp. raphanistrum (MS)
FD578899       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD545904       --> TTCTCTCTTCTc......................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD975617       --> TTCTCTCTTCTTGTCTGTTTTTCTTTTTTGTTTAA...............  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768895       --> TTCTCTCTTCTTGTCTGTTTTTCTTTTTTGTTTAATTGTCAGAGAAAATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573514       --> TTCTCTCTTCTTCTCTGTTTTTCTTTTTTtgtttcacc............  Raphanus raphanistrum subsp. landra
EV573586       --> TTCTCTCTTCTTCTCTGTTTTTCTTTTTTtgtttcacc............  Raphanus raphanistrum subsp. landra
FD968261       --> TTCTCTCTTCTTGTCTGTTTTTCTTTTTTGTTTAATTGTCAGcc......  Raphanus raphanistrum subsp. raphanistrum (MS)

               701    -    751
UN16230        --> TGAAAGTTGAGATCCCAATAAAGAGATGTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD549885       <-- ................................
FD979602       <-- ................................
EX765090       <-- TGAAAGTTGAGATCCCAATAAAGAGATGTTCC
EV568888       <-- ................................
EV568975       <-- ................................
FD972356       <-- ................................
FD578899       <-- ................................
FD545904       --> ................................
FD975617       --> ................................
EX768895       --> TGAAAGTTGAGATCCCAATAAAGAGATGTTCC
EV573514       --> ................................
EV573586       --> ................................
FD968261       --> ................................