RadishBase

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Alignment for radish unigene UN16236

               1      -     51
UN16236        --> GGTGTATATAACAAGTTGATGGAATTCATCAAGGAGCAATACTGGAAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY918510       <-- ..................................................
EV544073       <-- ..................................................
EX908551       <-- ..................................................
EW728500       <-- ..................................................
EY911663       <-- ..................................................
EX753967       <-- ..................................................
EY904714       <-- ..................................................
FD557667       --> GGTGTATATAACAAGTTGATGGAATTCATCAAGGAGCAATACTGGAAAAG
EY915901       --> ..................................................
EV548398       --> ..................................................
EY909148       --> ..................................................
EX904700       --> ..................................................
EY922570       --> ..................................................
EV527732       --> ..................................................
EW724014       --> ..................................................

               51     -    101
UN16236        --> GGGTTACACTGAGGTCATCACGCCAAATATGTACAACATGAATCTGTGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY918510       <-- ..................................................
EV544073       <-- ..................................................
EX908551       <-- ..................................................
EW728500       <-- ..................................................
EY911663       <-- ..................................................
EX753967       <-- ..................................................
EY904714       <-- ..................................................
FD557667       --> GGGTTACACTGAGGTCATCACGCCAAATATGTACAACATGAATCTGTGGG
EY915901       --> ..................................................
EV548398       --> ..................................................
EY909148       --> ..................................................
EX904700       --> ..................................................
EY922570       --> ..................................................
EV527732       --> ..................................................
EW724014       --> ..................................................

               101    -    151
UN16236        --> AGACTTCTGGACATGCTGCAAATTACAAGGATAATATGTTTACTTTTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY918510       <-- ..................................................
EV544073       <-- ..................................................
EX908551       <-- ..................................................
EW728500       <-- ..................................................
EY911663       <-- ..................................................
EX753967       <-- ..................................................
EY904714       <-- ..................................................
FD557667       --> AGACTTCTGGACATGCTGCAAATTACAAGGATAATATGTTTACTTTTGAT
EY915901       --> .......gGGACATGCTGCAAATTACAAGGATAATATGTTTACTTTTGAT
EV548398       --> ..................................................
EY909148       --> ..................................................
EX904700       --> ..................................................
EY922570       --> ..................................................
EV527732       --> ..................................................
EW724014       --> ..................................................

               151    -    201
UN16236        --> ATTGAGAAGCAGGAGTTCGGGCTCAAACCTATGAATTGCCCTGGTCACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY918510       <-- ..................................................
EV544073       <-- ..................................................
EX908551       <-- ..................................................
EW728500       <-- ..................................................
EY911663       <-- ..................................................
EX753967       <-- ..................................................
EY904714       <-- ..................................................
FD557667       --> ATTGAGAAGCAGGAGTTCGGGCTCAAACCAATGAATTGCCCTGGTCACTG
EY915901       --> ATTGAGAAACAGGAGTTCGGGCTCAAACCTATGAATTGCCCTGGTCACTG
EV548398       --> ..................................................
EY909148       --> ..................................................
EX904700       --> ..................................................
EY922570       --> ..................................................
EV527732       --> ..................................................
EW724014       --> ..................................................

               201    -    251
UN16236        --> TTTGATGTTCCAACACAGGGTTCGCTCATACAGAGAGTTACCTATCAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY918510       <-- ..................................................
EV544073       <-- ..................................................
EX908551       <-- ..................................................
EW728500       <-- ..................................................
EY911663       <-- ..................................................
EX753967       <-- ..................................................
EY904714       <-- ..................................................
FD557667       --> TTTGATGTTCCAACACAGGGTTCGCTCATACAGAGAGTTACCTATCAGAA
EY915901       --> CTTGATGTTCCAACACAGGGTTCGCTCATACAGAGAGTTACCTATCAGAA
EV548398       --> .......................................gCCTATCAGAA
EY909148       --> ..................................................
EX904700       --> ..................................................
EY922570       --> ..................................................
EV527732       --> ..................................................
EW724014       --> ..................................................

               251    -    301
UN16236        --> TGGCTGACTTTGGAGTGTTACACCGCAATGAGGCAAGTGGAGCCCTTAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY918510       <-- ..................................................
EV544073       <-- ..................................................
EX908551       <-- ..................................................
EW728500       <-- ..................................................
EY911663       <-- ..................................................
EX753967       <-- ..................................................
EY904714       <-- ..................................................
FD557667       --> TGGCTGACTTTGGAGTGTTACACCGCAATGAGGCAAGTGGAGCCCTTAGT
EY915901       --> TGGCTGACTTTGGAGTGTTACACCGCAATGAGGCAAGTGGAGCCCTTAGT
EV548398       --> TGGCTGACTTTGGAGTGTTACACCGCAATGAGGCAAGTGGAGCCCTTAGT
EY909148       --> ..................................................
EX904700       --> ..................................................
EY922570       --> ..................................................
EV527732       --> ..................................................
EW724014       --> ..................................................

               301    -    351
UN16236        --> GGGTTGACTCGCGTCCGACGGTTCCAGCAGGATGATGCACACATATTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY918510       <-- ..................................................
EV544073       <-- ..................................................
EX908551       <-- ..................................................
EW728500       <-- ..................................................
EY911663       <-- ..................................................
EX753967       <-- ..................................................
EY904714       <-- ..................................................
FD557667       --> GGGTTGACTCGCGTCCGACGGTTCCAGCAGGATGATGCACACATATTCTG
EY915901       --> GGGTTGACTCGCGTCCGACGGTTCCAGCAGGATGATGCACACATATTCTG
EV548398       --> GGGTTGACTCGCGTCCGACGGTTCCAGCAGGATGATGCACACATATTCTG
EY909148       --> ..................................................
EX904700       --> ..................................................
EY922570       --> ..................................................
EV527732       --> ..................................................
EW724014       --> ..................................................

               351    -    401
UN16236        --> TACAGAGGATCAGATTACGGAAGAAGTGAAAGGTGTGTTGGAGTTCATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY918510       <-- ..................................................
EV544073       <-- ..................................................
EX908551       <-- ..................................................
EW728500       <-- ..................................................
EY911663       <-- ..................................................
EX753967       <-- ..................................................
EY904714       <-- ..................................................
FD557667       --> TACAGAGGATCAGATTACGGAAGAAGTGAAAGGTGTGTTGGAGTTCATTG
EY915901       --> TACAGAGGATCAGATTACGGAAGAAGTGAAGGGTATGTTGGAGTTCATTG
EV548398       --> TACAGAGGATCAGATTACGGAAGAAGTGAAAGGTGTGTTGGAGTTCATTG
EY909148       --> ....GAGGATCAGATTACGGAAGAAGTGAAAGGTGTGTTGGAGTTCATTG
EX904700       --> ..........gAGATTACGGAAGAAGTGAAAGGTGTGTTGGAGTTCATTG
EY922570       --> ..................................................
EV527732       --> ..................................................
EW724014       --> ..................................................

               401    -    451
UN16236        --> ACTATGCGTACAAAATCTTTGGGTTCACCTATGAGCTGAAGCTTTCAACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY918510       <-- ..gATGCGTACAAA-TCTTTGGGTTCAC-TATGAGCTGAAGCTTTCAACG
EV544073       <-- .......................TTCAC-TATGAGCTGAAGCTTTCAACG
EX908551       <-- ................................GAGCTGAAGCTT-CAACG
EW728500       <-- ..................................................
EY911663       <-- ..................................................
EX753967       <-- ..................................................
EY904714       <-- ..................................................
FD557667       --> ACTATGCGTACAAAATCTTTGGATTCACCTATGAGCTGAAGCTTTCAACG
EY915901       --> ACTATGCGTACAAAATCTTCGGGTTCACCTATGAGCTGAAGCTTTCAACG
EV548398       --> ACTATGCGTACAAAATCTTTGGGTTCACCTATGAGCTGAAGCTTTCAACG
EY909148       --> ACTATGCGTACAAAATCTTTGGCTTCACCTATGAGCTGAAGCTTTCAACG
EX904700       --> ACTATGCGTACAAAATCTTTGGGTTCACCTATGAGCTGAAGCTTTCAACG
EY922570       --> ..gATGCGTACAAAATCTTTGGGTTCACCTATGAGCTGAAGCTTTCAACG
EV527732       --> ................................................gG
EW724014       --> ..................................................

               451    -    501
UN16236        --> AGGCCAGAAAAGTACCTTGGAGATTTGGCGACATGGGATAAAGCTGAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY918510       <-- AGGCCAGAAAAGTACCTTGGAGATTTGGCGACATGGGATAAAGCTGAAAA
EV544073       <-- AGGCCAGAAAAGTAC-TTGGAGATTTGGCGACATGGGATAAAGCTGAAAA
EX908551       <-- AGGCCAGAAAAGTACCTTG-AGATTTG-CGACATGG-ATAAAGCTGAAAA
EW728500       <-- ..................................................
EY911663       <-- ..................................................
EX753967       <-- ..................................................
EY904714       <-- ..................................................
FD557667       --> AGGCCAGAAAAGTACCTTGGAGATTTGGCGACATGGGATAAAGCTGAAAA
EY915901       --> AGGCCAGAGAAGTACCTTGGAGATTTGGCGACATGGGATAAAGCTGAAAA
EV548398       --> AGGCCAGAAAAGTACCTTGGAGATTTGGCGACATGGGATAAAGCTGAAAA
EY909148       --> AGGCCAGAAAAGTACCTTGGAGATTTGGCGACATGGGATAAAGCTGAAAA
EX904700       --> AGGCCAGAAAAGTACCTTGGAGATTTGGCGACATGGGATAAAGCTGAAAA
EY922570       --> AGGCCAGAAAAGTACCTTGGAGATTTGGCGACATGGGATAAAGCTGAAAA
EV527732       --> AGGCCAGAAAAGTACCTTGGAGATTTGGCGACATGGGATAAAGCTGAAAA
EW724014       --> ..................................................

               501    -    551
UN16236        --> CGATCTCAAAGTTGCTCTAGATGCCTTTGGAAAGACATGGCAGTTGAACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY918510       <-- CGATCTCAAAGTTGCTCTAGATGCCTTTGGAAAGACATGGCAGTTGAACG
EV544073       <-- CGATCTCAAAGTTGCTCTAGATGCCTTTGGAAAGACATGGCAGTTGAACG
EX908551       <-- CGATCTCAAAGTTGCTCTAGATGCCTTTGGAAAGACATGGCAGTTGAACG
EW728500       <-- .........AGTTGCTCTAGATGCCTTTGGAAATACATGGCAGTTGAACG
EY911663       <-- ....................ATGCCTTTGGAAAGACATGGCAGTTGAACG
EX753967       <-- ..................................................
EY904714       <-- ..................................................
FD557667       --> CGATCTCAAAGTTGCCCTAGATGCCTT-GGAAAGACATGGCAGTTGAACG
EY915901       --> CGATCTCAAAGTTGCCCTAGATGCCTTTGGAAAGACATGGCAGTTGAACG
EV548398       --> CGATCTCAAAGTTGCTCTAGATGCCTTTGGAAAGACATGGCAGTTGAACG
EY909148       --> TGATCTCAAAGTTGCCCTAGATGCCTTTGGAAAGGCATGGCAGTTGAACG
EX904700       --> CGATCTCAAAGTTGCTCTAGATGCCTTTGGAAAGACATGGCAGTTGAACG
EY922570       --> CGATCTCAAAGTTGCTCTAGATGCCTTTGGAAAGACATGGCAGTTGAACG
EV527732       --> CGATCTCAAAGTTGCCCTAGATGCCTTTGGAAAGACATGGCAGTTGAACG
EW724014       --> .........AGTTGCTCTAGATGCCTTTGGAAATACATGGCAGTTGAACG

               551    -    601
UN16236        --> AAGGAGATGGTGCCTTTTATGGCCCTAAGATAGATATTACTGTCTCTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY918510       <-- AAGGAGATGGTGCCTTTTATGGCCCTAAGATAGATATTACTGTCTCTGAT
EV544073       <-- AAGGAGATGGTGCCTTTTATGGCCCTAAGATAGATATTACTGTCTCTGAT
EX908551       <-- AAGGAGATGGTGCCTTTTATGGCCCTGAGATAGATATTACTGTTTCTGAT
EW728500       <-- AAGGAGATGGTGCCTTTTATGGCCCTAAGATAGATATTACTGTCTCTGAT
EY911663       <-- AAGGAGATGGTGCCTTTTATGGCCCTAAGATAGATATTACTGTCTCTGAT
EX753967       <-- ..............................TAGATATAACTGTCTCTGAT
EY904714       <-- ..................................................
FD557667       --> AAGGAGATGGTGCCTTTTATGGCCCTAAGATAGATATTACTGTCTCCGAT
EY915901       --> AAGGAGATGGTGCCTTTTATGGCCCTAAGATAGATATTACTGTCTCTGAT
EV548398       --> AAGGAGATGGTGCCTTTTATGGCCCTAAGATAGATATTACTGTCTCTGAT
EY909148       --> AAGGAGATGGTGCCTTTTATGGACCTAAGATAGATATCACTGTCTCTGAT
EX904700       --> AAGGAGATGGTGCCTTTTATGGCCCTGAGATAGATATTACTGTTTCTGAT
EY922570       --> AAGGAGATGGTGCCTTTTATGGCCCTAAGATAGATATTACTGTCTCTGAT
EV527732       --> AAGGAGATGGTGCCTTTTATGGCCCTAAGATAGATATAACTGTCTCTGAT
EW724014       --> AAGGAGATGGTGCCTTTTATGGCCCTAAGATAGATATTACTGTCTCTGAT

               601    -    651
UN16236        --> GCGCTTAATCGGAAATTTCAGTGCGCTACTTTACAGCTTGATTTTCAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY918510       <-- GCGCTTAATCGGAAATTTCAGTGCGCTACTTTACAGCTTGATTTTCAACT  Raphanus raphanistrum subsp. landra
EV544073       <-- GCGCTTAATCGGAAATTTCAGTGCGCTACTTTACAGCTTGGTTTTCAACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX908551       <-- GCGCTTAATCGGAAATTTCAGTGCGCTACTTTACAGCTTGATTTTCAACT  Raphanus sativus cv Rat-Tail Radish #3870
EW728500       <-- GCGCTTAATCGGAAATTTTAGTGCGCTACTTTACAGCTTGATTTTCAACT  Raphanus sativus cv Early Scarlet Globe
EY911663       <-- GCGCTTAACAGGAAATTTCAGTGCGCAACTTTACAGCTTGATTTTCAACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX753967       <-- GCGCTGAACAGGAAGTTCCAGTGTGCTACTTTACAGCTTGACTTTCAACT  Raphanus raphanistrum subsp. maritimus
EY904714       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD557667       --> GCGCTTAATAGGAAATTTCAGTGCGCTACTTTACAGCTTGATTTTCAACT  Raphanus raphanistrum subsp. landra
EY915901       --> GCGCTTAACAGGAAATTTCAGTGCGCAACTTTACAGCTTGATTTTCAACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548398       --> GCGCTTAATCGGAAATTTCAGTGCGCTACTTTACAGCTTGGTTTTCAACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY909148       --> GCGCTGAACAGGAAATTCCAGTGTGCTACATTACAGCTTGACTTTCAACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX904700       --> GCGCTTAATCGGAAATTTCAGTGCGCTACTTTACAGCTTGATTTTCAACT  Raphanus sativus cv Rat-Tail Radish #3870
EY922570       --> GCGCTTAATCGGAAATTTCAGTGCGCTACTTTACAGCTTGATTTTCAACT  Raphanus raphanistrum subsp. landra
EV527732       --> GCGCCGAACAGGAAGTTCCAGTGTGCTACTTTACAGCTTGACTTTCAACT  Raphanus raphanistrum subsp. maritimus
EW724014       --> GCGCTTAATCGGAAATTTTAGTGCGCTACTTTACAGCTTGATTTTCAACT  Raphanus sativus cv Early Scarlet Globe

               651    -    701
UN16236        --> TCCTGATCGCTTCAAACTGGAGTACTCAGGTGACGACGAAGCGAAGAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY918510       <-- TCCTGATCGCTTCAAACTGGAGTACTCAGGTGACGACGAAGCGAAGAGGA
EV544073       <-- TCCTGATCGCTTCAAACTGGAGTACTCAGGTGACGACGAAGCGAAGAGGA
EX908551       <-- TCCTGATCGCTTCAAACTGGAGTACTCAGGTGACGACGAAGCGAAGAGGA
EW728500       <-- TCCTGATCGCTTCAAACTGGAGTACTCAGGTGACGACGAAGCGAAGAGGA
EY911663       <-- TCCTGACCGCTTCAAACTGGAGTACTCAGGTGACGACGAAGCGAAGAGGA
EX753967       <-- TCCTGATCGCTTCAAACTGGAGTACTCAGGTGACGACGAAGCGAAGAGGA
EY904714       <-- ..................................................
FD557667       --> TCCTGATCGCTTCAAACTGGAGTACTCAG-TGACGACGAAGCTAAGAGta
EY915901       --> TCCTGACCGCTTCAAACTGGAGTACT........................
EV548398       --> TCCTGATCGCTTCAAACTGGAGTACTCAGGTGACGACGAAGCGAAGAGGA
EY909148       --> TCCTGATCGCTTCAAACTGGAGTACTCAGGTGACGACGAAGCGAAGAGGA
EX904700       --> TCCTGATCGCTTCAAACTGGAGTACTCAGGTGACGACGAAGCGAAGAGGA
EY922570       --> TCCTGATCGCTTCAAACTGGAGTACTCAGGTGACGACGAAGCGAAGAGGA
EV527732       --> TCCTGATCGCTTCAAACTGGAGTACTCAGGTGACGACGAAGCGAAGAGGA
EW724014       --> TCCTGATCGCTTCAAACTGGAGTACTCAGGTGACGACGAAGCGAAGAGGA

               701    -    751
UN16236        --> ACAGGCCTGTGATGATACACAGAGCCGTGCTGGGATCTGTGGAACGCATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY918510       <-- ACAGGCCTGTGATGATACACAGAGCCGTGCTGGGATCTGTGGAACGCATG
EV544073       <-- ACAGGCCTGTGATGATACACAGAGCCGTGCTGGGATCTGTGGAACGCATG
EX908551       <-- ACAGGCCTGTGATGATACACAGAGCCGTGCTGGGATCTGTGGAACGCATG
EW728500       <-- ACAGGCCTGTGATGATACACAGAGCCGTGCTGGGATCTGTGGAACGCATG
EY911663       <-- ACAGGCCTGTGATGATACACAGGGCCGTGCTGGGATCTGTGGAACGCATG
EX753967       <-- ACAGGCCTGTGATGATACACAGAGCTGTGCTGGGATCTGTGGAACGCATG
EY904714       <-- ...............................GGGATCTGTGGAACGCATG
FD557667       --> ..................................................
EY915901       --> ..................................................
EV548398       --> ACAGGCCTGTGATGATACACAGAGCCGTGCTGGGATCTGTGGAACGCATG
EY909148       --> ACAGGCCTGTGATTATACACAGGGCCGTGCTGGGATCTGTGGAACGCATG
EX904700       --> ACAGGCCTGTGATGATACACAGAGCCGTGCTGGGATCTGTGGAACGCATG
EY922570       --> ACAGGCCTGTGATGATACACAGAGCCGTGCTGGGATCTGTGGAACGCATG
EV527732       --> ACAGGCCTGTGATGATACACAGAGCTGTGCTGGGATCTGTGGAACGCATG
EW724014       --> ACAGGCCTGTGATGATACACAGAGCCGTGCTGGGATCTGTGGAACGCATG

               751    -    801
UN16236        --> TTCGCCATCTTACTGGAGCACTACAAAGGGAAATGGCCGTTCTGGTTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY918510       <-- TTCGCCATTTTACTGGAGCACTACAAAGGGAAATGGCCGTTCTGGTTGAG  Raphanus raphanistrum subsp. landra
EV544073       <-- TTCGCCATTTTACTGGAGCACTACAAAGGGAAATGGCCGTTCTGGTTGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX908551       <-- TTCGCCATCTTACTGGAGCACTACAAAGGGAAATGGCCGTTCTGGTTGAG  Raphanus sativus cv Rat-Tail Radish #3870
EW728500       <-- TTCGCCATCTTACTGGAGCACTACAAAGGGAAATGGCCGTTCTGGTTGAG  Raphanus sativus cv Early Scarlet Globe
EY911663       <-- TTCGCCATCTTACTGGAGCATTACAAAGGGAAATGGCCGTTCTGGTTAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX753967       <-- TTCGCCATCTTACTGGAGCACTACAAAGGGAAATGGCCGTTCTGGTTAAG  Raphanus raphanistrum subsp. maritimus
EY904714       <-- TTCGCCATCTTACTGGAGCATTACAAAGGGAAATGGCCGTTCTGGTTAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD557667       --> ..................................................  Raphanus raphanistrum subsp. landra
EY915901       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548398       --> TTCGCCATTTTACTGGAGCACTACAAAGGGAAATGGCCGTTCTGGTTGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY909148       --> TTCGCCATCTTACTGGAGCATTACAAAGGGAAATGGCCGTTCTGGTTAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX904700       --> TTCGCCATCTTACTGGAGCACTACAAAGGGAAATGGCCGTTCTGGTTGAG  Raphanus sativus cv Rat-Tail Radish #3870
EY922570       --> TTCGCCATTTTACTGGAGCACTACAAAGGGAAATGGCCGTTCTGGTTGAG  Raphanus raphanistrum subsp. landra
EV527732       --> TTCGCCATCTTACTGGAGCACTACAAAGGGAAATGGCCGTTCTGGTTAAG  Raphanus raphanistrum subsp. maritimus
EW724014       --> TTCGCCATCTTACTGGAGCACTACAAAGGGAAATGGCCGTTCTGGTTGAG  Raphanus sativus cv Early Scarlet Globe

               801    -    851
UN16236        --> TCCGCGACAGGCCATAGTGTGCCCTATATCGAAGAAGTCTGAGGAGTATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY918510       <-- TCCGCGACAGGCCATAGTGTGCCCTATATCGAAGAAGTCTGAGGAGTATG
EV544073       <-- TCCGCGACAGGCCATAGTGTGCCCTATATCGAAGAAGTCTGAGGAGTATG
EX908551       <-- TCCGCGACAGGCCATAGTGTGCCCTATATCGAAGAAGTCTGAGGAGTATG
EW728500       <-- TCCGCGACAGGCCATAGTGTGCCCTATATCGAAGAAGTCTGAGGAGTATG
EY911663       <-- TCCGCGACAGGCCATAGTGTGCCCTATATCGAAGAAGTCTGAGGAGTATG
EX753967       <-- TCCGCGACAGGCCATAGTGTGCCCTATATCGAAGAAGTCTGAGGAGTATG
EY904714       <-- TCCGCGACAGGCCATAGTGTGCCCTATATCGAAGAAGTCTGAGGAGTATG
FD557667       --> ..................................................
EY915901       --> ..................................................
EV548398       --> TCCGCGACAGGCCATAGTGTGCCCTATATCGAAGAAGTCTGAGGAGTATG
EY909148       --> TCCGCGACAGGCCATAGTGTGCCCTATATCGAAGAAGTCTGAGGAGTATG
EX904700       --> TCCGCGACAGGCCATAGTGTGCCCTATATCGAAGAAGTCTGAGGAGTATG
EY922570       --> TCCGCGACAGGCCATAGTGTGCCCTATATCGAAGAAGTCTGAGGAGTATG
EV527732       --> TCCGCGACAGGCCATAGTGTGCCCTATATCGAAGAAGTCTGAGGAGTATG
EW724014       --> TCCGCGACAGGCCATAGTGTGCCCTATATCGAAGAAGTCTGAGGAGTATG

               851    -    901
UN16236        --> CTTTGAAGGTGAAAGCCCAAATTCATGACGCTGGGTACTACGTGGATGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY918510       <-- CTTTGAAGGTGAAAGCCCAAATTCATTACGCTGGGTACTACGTGGATGCT  Raphanus raphanistrum subsp. landra
EV544073       <-- CTTTGAAGGTGAAAGCCCAAATTCATGACGCTGGGTACTACGTGGATGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX908551       <-- CTTTGAAGGTGAAAGCCCAAATTCATGACGCTGGGTACTACGTGGATGCG  Raphanus sativus cv Rat-Tail Radish #3870
EW728500       <-- CTTTGAAGGTGAAAGCCCAAATTCATGACGCTGGGTACTACGTGGATGCG  Raphanus sativus cv Early Scarlet Globe
EY911663       <-- CTTTGAAGGTGAAAGCCCAAATTCATGACGCTGGGTACTACGTGGATGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX753967       <-- CTTTGAAGGTGAAAGCCCAAATTCATGACGCTGGGTACTACGTGGATGCT  Raphanus raphanistrum subsp. maritimus
EY904714       <-- CTTTGAAGGTGAAAGCCCAAATTCATGACGCTGGGTACTACGTGGATGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD557667       --> ..................................................  Raphanus raphanistrum subsp. landra
EY915901       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548398       --> CTTTGAAGGTGAAAGCCCAAATTCATGACGCTGGGTACTACGTGGATGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY909148       --> CTTTGAAGGTGAAAGCCCAAATTCATGACGCTGGGTACTACGTGGATGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX904700       --> CTTTGAAGGTGAAAGCCCAAATTCATGACGCTGGGTACTACGTGGATGCG  Raphanus sativus cv Rat-Tail Radish #3870
EY922570       --> CTTTGAAGGTGAAAGCCCAAATTCATTACGCTGGGTACTACGTGGATGCT  Raphanus raphanistrum subsp. landra
EV527732       --> CTTTGAAGGTGAAAGCCCAAATTCATGACGCTGGGTACTACGTGGATGCT  Raphanus raphanistrum subsp. maritimus
EW724014       --> CTTTGAAGGTGAAAGCCCAAATTCATGACGCTGGGTACTACGTGGATGCG  Raphanus sativus cv Early Scarlet Globe

               901    -    951
UN16236        --> GACATAACTGACAGAAAGATCGATAAAAAGGTGCGAGAAGCTCAGCTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY918510       <-- GACATAACTGACAGAAAGATTGATAAAAAGGTGCGAGAAGCTAAGCTTGC  Raphanus raphanistrum subsp. landra
EV544073       <-- GACATAACTGACAGAAAGATTGATAAAAAGGTGCGAGAAGCTCAGCTTGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX908551       <-- GACATAACTGACAGAAAGATCGATAAAAAGGTGCGAGAAGCTCAGCTTGC  Raphanus sativus cv Rat-Tail Radish #3870
EW728500       <-- GACATAACTGACAGAAAGATCGATAAAAAGGTGCGAGAAGCTCAGCTTGC  Raphanus sativus cv Early Scarlet Globe
EY911663       <-- GACATAACTGACAGAAAGATCGATAAAAAGGTGCGAGAAGCTCAGCTTGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX753967       <-- GACATAACTGACAGAAAGATTGATAAAAAGGTGCGAGAAGCTCAGCTTGC  Raphanus raphanistrum subsp. maritimus
EY904714       <-- GACATAACTGACAGAAAGATCGATAAAAAGGTGCGAGAAGCTCAGCTTGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD557667       --> ..................................................  Raphanus raphanistrum subsp. landra
EY915901       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548398       --> GACATAACTGACAGAAAGATTGATAAAAAGGTGCGAGAAGCTCAGCTTGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY909148       --> GACATAACTGACAGAAAGATCGATAAAAAGGTGCGAGAAGCTCAGCTTGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX904700       --> GACATAACTGACAGAAAGATCGATAAAAAGGTGCGAGAAGCTCAGCTTGC  Raphanus sativus cv Rat-Tail Radish #3870
EY922570       --> GACATAACTGACAGAAAGATTGATAAAAAGGTGCGAGAAGCTAAGCTTGC  Raphanus raphanistrum subsp. landra
EV527732       --> GACATAACTGACAGAAAGATTGATAAAAAGGTGCGAGAAGCTCAGCTTGC  Raphanus raphanistrum subsp. maritimus
EW724014       --> GACATAACTGACAGAAAGATCGATAAAAAGGTGCGAGAAGCTCAGCTTGC  Raphanus sativus cv Early Scarlet Globe

               951    -   1001
UN16236        --> GCAGTACAACTACATACTTGTGGTTGGTGAAACCGAAGCTGCTACAGGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY918510       <-- GCAGTACAACTACATACTTGTGGTTGGTGAAACCGAAGCTGCTACAGGAC
EV544073       <-- GCAGTACAACTACATACTTGTGGTTGGTGAAACCGAAGCTGCTACAGGAC
EX908551       <-- GCAGTACAACTACATACTTGTGGTTGGTGAAACCGAAGCTGCTACAGGAC
EW728500       <-- GCAGTACAACTACATACTTGTGGTTGGTGAAACCGAAGCTGCTACAGGAC
EY911663       <-- GCAGTACAACTACATACTTGTGGTTGGTGAAACCGAAGCTGCTACAGGAC
EX753967       <-- GCAGTACAACTACATACTTGTGGTTGGTGAAACCGAAGCTGCTACAGGAC
EY904714       <-- GCAGTACAACTACATACTTGTGGTTGGTGAAACCGAAGCTGCTACAGGAC
FD557667       --> ..................................................
EY915901       --> ..................................................
EV548398       --> GCAGTACAACTACATACTTGTGGTTGGTGAAACCGAAGCTGCTAC.....
EY909148       --> GCAGTACAACTACATACTTGTGGTTGGTGAAACCGAAGCTGCTA......
EX904700       --> GCAGTACAACTACATACTTGTGGTTGGTGAA-CCGAAGCTGCT.......
EY922570       --> GCAGTACAACTACATACTTGTGGTTGGTGAAACCGAAGCTGCTACAGGAC
EV527732       --> GCAGTACAACTACATACTTGTGGTTGGTGAAACCGAAGCTGCTACAGGAC
EW724014       --> GCAGTACAACTACATACTTGTGGTTGGTGAAACCGAAGCTGCTACAGGAC

               1001   -   1051
UN16236        --> AGGTGAGTGTACGGATAAGAGACAGTGCAGCTCACTCGGTGAAGAGCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY918510       <-- AGGTGAGTGTACGGATAAGAGACAGTGCAGCCCACTCGGTGAAGAGCATC  Raphanus raphanistrum subsp. landra
EV544073       <-- AGGTGAGTGTACGGATAAGAGACAGTGCAGCCCACTCGGTGAAGAGCATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX908551       <-- AGGTGAGTGTACGGATAAGAGACAGTGCAGCTCACTCGGTGAAGAGCATC  Raphanus sativus cv Rat-Tail Radish #3870
EW728500       <-- AGGTGAGTGTACGGATAAGAGACAGTGCAGCTCACTCGGTGAAGAGCATC  Raphanus sativus cv Early Scarlet Globe
EY911663       <-- AGGTGAGTGTTCGGATAAGAGACAGTGCAGCTCACTCGGTGAAGAGCATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX753967       <-- AGGTGAGTGTACGGATAAGAGACAGTGCAGCCCACTCGGTGAAGAGCATC  Raphanus raphanistrum subsp. maritimus
EY904714       <-- AGGTGAGTGTTCGGATAAGAGACAGTGCAGCTCACTCGGTGAAGAGCATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD557667       --> ..................................................  Raphanus raphanistrum subsp. landra
EY915901       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548398       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY909148       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX904700       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY922570       --> AGGTGAGTGTACGGATAAGAGACAGTGCAGCCCACTCGGTGAAGAGCATC  Raphanus raphanistrum subsp. landra
EV527732       --> AGGTGAGTGTACGGATAAGAGACAGTGCAGCCCACTCGGTGAAGAGCATC  Raphanus raphanistrum subsp. maritimus
EW724014       --> AGGTGAGTGTACGGATAAGAGACAGTGCAGCTCACTCGGTGAAGAGCATC  Raphanus sativus cv Early Scarlet Globe

               1051   -   1101
UN16236        --> GAGGATTTACTGGAAGAATTCAAGACCAAGACTGCCGAGTATCAATGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY918510       <-- GAGGATTTACTGGAAGAATTCAAGACCAAGACTGCCGAGTATCAATGAGA
EV544073       <-- GAGGATTTACTGGAAGAATTCAAGACCAAGACTGCCGAGTATCAATGAGA
EX908551       <-- GAGGATTTACTGGAAGAATTCAAGACCAAGACTGCCGAGTATCAATGAGA
EW728500       <-- GAGGATTTACTGGAAGAATTCAAGACCAAAACTGCCGAGTATCAATGAGA
EY911663       <-- GAAGATTTACTGGAAGAATTCAAGACCAAGACTGCCGAGTATCAATGAGA
EX753967       <-- GAGGATTTACTGGAAGAATTCAAGACCAAGACTGCCGAGTATCAATGAGA
EY904714       <-- GAGGATTTACTGGAAGAATTCAAGACCAAGACTGCCGAGTATCAATGAGA
FD557667       --> ..................................................
EY915901       --> ..................................................
EV548398       --> ..................................................
EY909148       --> ..................................................
EX904700       --> ..................................................
EY922570       --> GAGGATTTACTGGAAGAATTCAAGACCAAGACTGCCGAGTATCAATGAGA
EV527732       --> GAGGATTTACTGGAAGAATTCAAGACCAAGACTGCCGAGTATCAATGAGA
EW724014       --> GAGGATTTACTGGAAGAATTCAAGACCAAAACTGCCGAGTATCAATGAGA

               1101   -   1151
UN16236        --> GATCAGACTCTTAAAAGTTCAAGTTTGATTTTATTTTGATGAATACTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY918510       <-- GATCAGACTCTTAAAAGTTCAAGTTTGATTTTATTTTGATGAATACTGTT
EV544073       <-- GATCAGACTCTTAAAAGTTCAAGTTTGATTTTATTTTGATGAATACTGCT
EX908551       <-- GATCAGACTCTTGAAACTTCAAGTTTGATTTTATTTTGATGAATACTGTT
EW728500       <-- GATCAGACTCTTAAAACTTCAAGTTTGATTTTATTTTGATGAATACTGTT
EY911663       <-- GATCAGACTCTTGAAAGTTCAAGTTTGATTTTATTTTGATGAATACTGTT
EX753967       <-- GATCAGACTCTTAAAAGTTCAAGTTTGATTTTATTTTGATGAATACTGTT
EY904714       <-- GATCAGACTCTTGAAAGTTCAAGTTTGATTTTATTTTGATGAATACTGTT
FD557667       --> ..................................................
EY915901       --> ..................................................
EV548398       --> ..................................................
EY909148       --> ..................................................
EX904700       --> ..................................................
EY922570       --> GATCAGACTCTTAAAAGTTCAAGTTTGATTTTATTT-GATGAATACTGTT
EV527732       --> GATCAGACTCTTAAAAGTTCAAGTTTGATTTTATTTTGATGAATACTGTT
EW724014       --> GATCAGACTCTTAAAACTTCAAGTTTGATTTTATTTTGATGAATACTGTT

               1151   -   1201
UN16236        --> TT-GT-TTTT-AATTTAATTATGCAAAAAA--TAGAGTAAAGACCAGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY918510       <-- TT-GT-TTTT-AATTTAATTATGCAAAAAA--TAGAGTAAAGACCAGATT
EV544073       <-- TT-GT-TTTT-AATTTAATTATGCAAAAAA--TAGAGTAAAGACCAGATT
EX908551       <-- TTTGT-TTTA-AATTTAATTATGCAAAAAA-ATAGAGTAAAAACCAGATT
EW728500       <-- TTTGT-TTTA-AATTTAATTATGCAAAAAAAATAGAGTAAAAACCAGATT
EY911663       <-- TT-GT-TTTTTAATTTAATTATGCAAAAAA--TAGAGTAAAGACCAGATT
EX753967       <-- TT-GT-TTTT-GATTTAATTATGCAAAAAA--TAGAGTAAAGGCCAGATT
EY904714       <-- TT-GTCTTTT-AATTTAATTATGCAAAAAA--TAGAGTAAAGACCAGATT
FD557667       --> ..................................................
EY915901       --> ..................................................
EV548398       --> ..................................................
EY909148       --> ..................................................
EX904700       --> ..................................................
EY922570       --> TT-GT-T...........................................
EV527732       --> TT-GT-TTTT-GATTTAATTATGCAAAAAA--TAGAGTAAAGACCAGATT
EW724014       --> TTTGT-TTTA-AATTTAATTATGCAAAAAAAATAGAGTAAAAACCAGATT

               1201   -   1251
UN16236        --> GAAGTGTTTACTT-CTCTTTATCATTAAACCAGATTCTAAAGTTTCATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY918510       <-- GAAGTGTTTACCT-CTCTTTAACATTAAACCAGATTCTAAAGTTTCATTT  Raphanus raphanistrum subsp. landra
EV544073       <-- GAAGTGTTTACTT-CTCTTTAACATTAAACCAGATTCTAAAGTTTCATTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX908551       <-- GAAGTGTT-------TACTTATCATTAAACCAGATTCTAAAGTTTCATTA  Raphanus sativus cv Rat-Tail Radish #3870
EW728500       <-- GAAGTGTT-------TACTTATCATTAAACCAGATTCTAAAGTTTCAct.  Raphanus sativus cv Early Scarlet Globe
EY911663       <-- GAAATGTTTACTTTTTCTTCATCATTAAACCAGATTCTAAAGTTcc....  Raphanus raphanistrum subsp. raphanistrum (NY)
EX753967       <-- GAAGTGTTTACTT-CTCTTTATCATTAAACCAGATTCTAAAGTTTCATTT  Raphanus raphanistrum subsp. maritimus
EY904714       <-- GAAGTGTTTACTT-CTCTTTATCATTAAACCAGATTCTAAAGTTTCATTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD557667       --> ..................................................  Raphanus raphanistrum subsp. landra
EY915901       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548398       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY909148       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX904700       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY922570       --> ..................................................  Raphanus raphanistrum subsp. landra
EV527732       --> GAAGTGTTTACTT-CTCTTTATCATTAAACCAGATTCTAAAGTTTCATTT  Raphanus raphanistrum subsp. maritimus
EW724014       --> GAAGTGTTTACTT-------ATCATTAAACCAGATTCTAAAGTTTCAct.  Raphanus sativus cv Early Scarlet Globe

               1251   -   1301
UN16236        --> CTTCTCCAGCGATTTTGCTTCCTATCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY918510       <-- CTTC........................
EV544073       <-- CTTCTCC.....................
EX908551       <-- CTTCTCtag...................
EW728500       <-- ............................
EY911663       <-- ............................
EX753967       <-- ............................
EY904714       <-- CTTCTCC.....................
FD557667       --> ............................
EY915901       --> ............................
EV548398       --> ............................
EY909148       --> ............................
EX904700       --> ............................
EY922570       --> ............................
EV527732       --> CT-CTCCAGCGATTTTGCTTCCTATCTT
EW724014       --> ............................