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Alignment for radish unigene UN16240

               1      -     51
UN16240        --> GCACAACACTTCAGTTTTTAGCAAAGGAATATTAAGCATCCATAGTTTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431727       <-- ............AGTTTTTAGCAAAGGAATATTAAGCATCCATAGTTTAT
FY439915       <-- ...................AGCAAAGGAATATTAAGCATCCATAGTTTAT
FY433115       <-- ....................GCAAAGGAATATTAAGCATCCATAGTTTAT
FY437592       <-- ..................................................
FD578762       <-- ..................................................
FD580062       <-- ..................................................
FD577794       <-- ..................................................
FD956049       <-- ..................................................
EW721790       --> GCACAACACTTCAGTTTTTAGCAAAGGAATATTAAGCATCCATAGTTTAT
FD582042       --> GCACAACACTTCAGTTTTTAGCAAAGGAATATTAAGCATCCATAGTTTAT
FD952003       --> ...................AGCAAAGGAATATTAAGCATCCATAGTTTAT
FD582873       --> ...................cGCAAAGGAATATTAAGCATCCATAGTTTAT
EY926996       --> ..................................................

               51     -    101
UN16240        --> GTTTCTTGCAAACATGAAAGGGGTCGTGCAAGTTGCAACTAGAAAACAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431727       <-- GTTTCTTGCAAACATGAAAGGGGTCGTGCAAGTTGCAACTAGAAAACAAA
FY439915       <-- GTTTCTTGCAAACATGAAAGGGGTCGTGCAAGTTGCAACTAGAAAACAAA
FY433115       <-- GTTTCTTGCAAACATGAAAGGGGTCGTGCAAGTTGCAACTAGAAAACAAA
FY437592       <-- ........CAAACATGAAAGGGGTCGTGCAAGTTGCAACTAGAAAACAAA
FD578762       <-- ........................CGTGCAAGT-GCAACTAGAAAACAAA
FD580062       <-- ........................CGTGCAAGT-GCAACTAGAAAACAAA
FD577794       <-- ..................................................
FD956049       <-- ..................................................
EW721790       --> GTTTCTTGCAAACATGAAAGGGGTCGTGCAAGTTGCAACTAGAAAACAAA
FD582042       --> GTTTCTTGCAAACATGAAAGGGGTCGTGCAAGTTGCAACTAGAAAACAAA
FD952003       --> GTTTCTTGCAAACATGAAAGGGGTCGTGCAAGTTGCAACTAGAAAACAAA
FD582873       --> GTTTCTTGCAAACATGAAAGGGGTCGTGCAAGTTGCAACTAGAAAACAAA
EY926996       --> ..................................................

               101    -    151
UN16240        --> CATCTCAAGCAGACAAAACTCGGAAGGAAATGAAATGTATCGTTTGGTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431727       <-- CATCTCAAGCAGACAAAACTCGGAAGGAAATGAAATGTATCGTTTGGTAG
FY439915       <-- CATCTCAAGCAGACAAAACTCGGAAGGAAATGAAATGTATCGTTTGGTAG
FY433115       <-- CATCTCAAGCAGACAAAACTCGGAAGGAAATGAAATGTATCGTTTGGTAG
FY437592       <-- CATCTCAAGCAGACAAAACTCGGAAGGAAATGAAATGTATCGTTTGGTAG
FD578762       <-- CATCTCAAGCAGACAAAACTCGGAAGGAAATGAAATGTATCGTTTGGTAG
FD580062       <-- CATCTCCAGCAGACAAA-CTCGGAAGGAA-TGAAATGTATCGTTTG-TAG
FD577794       <-- .........CAGACAAAACTCGGAAGGAAATGAAATGTATAGTTTG-TAG
FD956049       <-- ..................................................
EW721790       --> CATCTCAAGCAGACAAAACTCGGAAGGAAATGAAATGTATCGTTTGGTAG
FD582042       --> CATCTCAAGCAGACAAAACTCGGAAGGAAATGAAATGTATAGTTTGGTAG
FD952003       --> CATCTCAAGCAGACAAAACTCGGAA-AAAATGAAATGTATCGTTTGGTAG
FD582873       --> CATCTCAAGCAAACAAAACTCGGAAGGAAATGAAATGTATCGTTTGGTAG
EY926996       --> .................................AATGTATCGTTTGGTAG

               151    -    201
UN16240        --> GGAGACAAGTTTTAGAGCGTCTCTAGATCTTGTTGAATGCGACAATGTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431727       <-- GGAGACAAGTTTTAGAGCGTCTCTAGATCTTGTTGAATGCGACAATGTCA
FY439915       <-- GGAGACAAGTTTTAGAGCGTCTCTAGATCTTGTTGAATGCGACAATGTCA
FY433115       <-- GGAGACAAGTTTTAGAGCGTCTCTAGATCTTGTTGAATGCGACAATGTCA
FY437592       <-- GGAGACAAGTTTTAGAGCGTCTCTAGATCTTGTTGAATGCGACAATGTCA
FD578762       <-- GGAGACAAGTTTTAGAGCGTCTCTAGATCTTGTTGAATGCGACAATGTCA
FD580062       <-- GGAGACAAGTTTTAGAGCGTCTCTAGATCTTGTTGAATGCGACAATGTCA
FD577794       <-- GGAGACAAGTTTTAGAGCGTCTCTAGATCT-G-TGAATGCGACAATGTCA
FD956049       <-- ...........................................AATGTCA
EW721790       --> GGAGACAAGTTTTAGAGCGTCTCTAGATCTTGTTGAATGCGACAATGTCA
FD582042       --> GGAGACAAGTTTTAAAGCGTCTCTAGATCTTGTTGAATGCGACAATGTCA
FD952003       --> GGAGACAAGTTTTAGAGCGTCTCTAGATCTTGTTGAATGCGACAATGTCA
FD582873       --> GGAGACAAGTTTTAAAGCGTCTCTAGATCTTGTTGAATGCGACAATGTCA
EY926996       --> GGAAACAAGTTTTAAAGCGTCTCTAGATCTTGTTGAATGCGACAATGTCA

               201    -    251
UN16240        --> ACACTCTGGATGTACTCGTTGTTAGGTTCAGAGGTGAGATAGTCTTCAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431727       <-- ACACTCTGGATGTACTCGTTGTTAGGTTCAGAGGTGAGATAGTCTTCAAT
FY439915       <-- ACACTCTGGATGTACTCGTTGTTAGGTTCAGAGGTGAGATAGTCTTCAAT
FY433115       <-- ACACTCTGGATGTACTCGTTGTTAGGTTCAGAGGTGAGATAGTCTTCAAT
FY437592       <-- ACACTCTGGATGTACTCGTTGTTAGGTTCAGAGGTGAGATAGTCTTCAAT
FD578762       <-- ACACTCTGGATGTACTCGTTGTTAGGTTCAGAGGTGAGATAGTCTTCAAT
FD580062       <-- ACACTCTGGATGTACTCGT-GTTAGGTTCAGAGGTGAGATAGTCTTCAAT
FD577794       <-- ACACTCTGGATGTACTCGTTGTTAGGTTCAGAGGTGAGATAGTCTTCAAT
FD956049       <-- ACACTCTGGATGTACTCGT-GTTAGGT-CAGAGGTGAGATAGTCTCCAAT
EW721790       --> ACACTCTGGATGTACTCGTTGTTAGGTTCAGAGGTGAGATAGTCTTCAAT
FD582042       --> ACACTCTGGATGTACTCGTTGTTAGGTTCAAAGGTGAAATAGTCTTCAAT
FD952003       --> ACACTCTGGATGTACTCGTTGTTAGGTTCAGAGGTGAGATAGTCTCCAAT
FD582873       --> ACACTCTGGATGTACTCGTTGTTAGGTTCAAAGGTGAGATAGTCTTCAAT
EY926996       --> ACACTCTGGATGTACTCGTTGTTAGGTTCAAAGGTGAAATAGTCTTCAAT

               251    -    301
UN16240        --> GAGGTTGTCTGGGGAGACGAGGTCATCAACGATTGTGAGCATGATCGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431727       <-- GAGGTTGTCTGGGGAGACGAGGTCATCAACGATTGTGAGCATGATCGTGA
FY439915       <-- GAGGTTGTCTGGGGAGACGAGGTCATCAACGATTGTGAGCATGATCGTGA
FY433115       <-- GAGGTTGTCTGGGGAGACGAGGTCATCAACGATTGTGAGCATGATCGTGA
FY437592       <-- GAGGTTGTCTGGGGAGACGAGGTCATCAACGATTGTGAGCATGATCGTGA
FD578762       <-- GAGGTTGTCTGGGGAGACGAGGTCATCAACGATTGTGAGCATGATCGTGA
FD580062       <-- GAGGTGGTCTGGGGAGACGAGGTCATCAACGATTGTGAGCATGATCGTGA
FD577794       <-- GAGGTTGTCTGGGGAGACGAGGTCATCAACGATTGTGAGCATGATCGTGA
FD956049       <-- GAGGTTGTCTGGGGAGACGAGGTCATCAACGATTGTGAGCATGATCGTGA
EW721790       --> GAGGTTGTCTGGGGAGACGAGGTCATCAACGATTGTGAGCATGATCGTGA
FD582042       --> GAGGTTGTCTGGGGAGACGAGGTCATCAACGATTGTGAGCATGATCGTGA
FD952003       --> GAGGTTGTCTGGGGAGACGAGGTCATCAACGATTGTGAGCATGATCGTGA
FD582873       --> GAGGTTGTCTGGGGAGACGAGGTCATCAACGATTGTGAGCATGATCGTGA
EY926996       --> GAGGTTGTCTGGGGAGACGAGGTCATCAACGATTGTGAGCATGATCGTGA

               301    -    351
UN16240        --> GCTTCTTGATCCCGTAACCAACTGGAACCAGTTTTGAAGCTCCCCATAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431727       <-- GCTTCTTGATCCCGTAACCAACTGGAACCAGTTTTGAAGCTCCCCATAGA
FY439915       <-- GCTTCTTGATCCCGTAACCAACTGGAACCAGTTTTGAAGCTCC.......
FY433115       <-- GCTTCTTGATCCCGTAACCAACTGGAACCAGTTTTGAAGCTCCCCATAGA
FY437592       <-- GCTTCTTGATCCCGTAACCAACTGGAACCAGTTTTGAAGCTCCCCATAGA
FD578762       <-- GCTTCTTGATCCCGTAACCAACTGGAACCAGTTTTGAAGCTCCCCATAGA
FD580062       <-- GCTTCTTGATCCCGTAACCAACTGGAACCAGTTTTGAAGCTCCCCATAGA
FD577794       <-- GCTTCTTGATCCCGTAACCAACTGGAACCAGTTTTGAAGCTCCCCATAGA
FD956049       <-- GCTTCTTGATCCCGTAACCAACTGGAACCAGTTTTGAAGCTCCCCATAGA
EW721790       --> GCTTCTTGATCCCGTAACCAACTGGAACCAGTTTTGAAGCTCCCCATAGA
FD582042       --> GCTTCTTGATCCCGTAACCAACTGGAACCAGTTTTGAAGCTCCCCATAAA
FD952003       --> GCTTCTTGATCCCGTAACCAACTGGAACCAGTTTTGAAGCTCCCCATAGA
FD582873       --> GCTTCTTGATCCCGTAACCAACTGGAACCAGTTTTGAAGCTCCCCATAAA
EY926996       --> GCTTCTTGATCCCGTAACCAACTGGAACCAGTTTTGAAGCTCCCCATAAA

               351    -    401
UN16240        --> AGACCAGGCATCTCAACAGCACGAACACACTCCTCAAGTTTCTTCATATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431727       <-- AGACCAGGCATCTCAACAGCACGAACACACTCCTCAAGTTTCTTCATATC
FY439915       <-- ..................................................
FY433115       <-- AGACCAGGCATCTCAACAGCACGAACACACTCCTCAAGTTTCTTCATATC
FY437592       <-- AGACCAGGCATCTCAACAGCACGAACACACTCCTCAAGTTTCTTCATATC
FD578762       <-- AGACCAGGCATCTCAACAGCACGAACACACTCCTCAAGTTTCTTCATATC
FD580062       <-- AGACCAGGCATCTCAACAGCACGAACACACTCCTCAAGTTTCTTCATATC
FD577794       <-- AGACCAGGCATCTCAGCAGCACGAACACACTCCTCAAGTTTCTTCATATC
FD956049       <-- AGACCAGGCATCTCAACAGCACGAACACACTCCTCAAGTTTCTTCATATC
EW721790       --> AGACCAGGCATCTCAACAGCACGAACACACTCCTCAAGTTTCTTCATATC
FD582042       --> AAACCAGGCATCTCAGCAGCACGAACACACTCCTCAAGTTTCTTCATATC
FD952003       --> AGACCAGGCATCTCAACAGCACGAACACACTCCTCAAGTTTCTTCATATC
FD582873       --> AAACCAGGCATCTCAACAGCACGAACACACTCCTCAAGTTTCTTCATATC
EY926996       --> AAACCAGGCATCTCAACAGCACGAACACACTCCTCAAGTTTCTTCATATC

               401    -    451
UN16240        --> TGTCTCGTCATCCCATGGTTTCACTTCCATGAGCACAGATGACTTTCCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431727       <-- TGTCTCGTCATCCCATGGTTTCACTTCCATGAGCACAGATGACTTTCCAC
FY439915       <-- ..................................................
FY433115       <-- TGTCTCGTCATCCCATGGTTTCACTTCCATGAGCACAGATGACTTTCCAC
FY437592       <-- TGTCTCGTCATCCCATGGTTTCACTTCCATGAGCACAGATGACTTTCCAC
FD578762       <-- TGTCTCGTCATCCCATGGTTTCACTTCCATGAGCACAGATGACTTTCCAC
FD580062       <-- TGTCTCGTCATCCCATGGTTTCACTTCCATGAGCACAGATGACTTTCCGC
FD577794       <-- TGTCTCGTCATCCCATGGTTTCACTTCCATGAGCACAGATGACTTTCCAC
FD956049       <-- TGTCTCGTCATCCCATGGTTTCACTTCCATGAGCACAGATGACTTTCCAC
EW721790       --> TGTCTCATCATCCCATGGTTTCACTTCCATGAGCACAGATGACTTTCCAC
FD582042       --> TGTCTCGTCATCCCATGGTTTCACTTCCATGAGCACAGATGACTTTCCAC
FD952003       --> TGTCTCGTCATCCCATGGTTTCACTTCCATGAGCACAGATGACTTTCCAC
FD582873       --> TGTCTCGTCATCCCATGGTTTCACTTCCATGAGCACAGATGACTTTCCAC
EY926996       --> TGTCTCGTCATCCCATGGTTTCACTTCCATGAACACAAATGACTTTCCAC

               451    -    501
UN16240        --> TCTCTTTGGGCTTCTTGGTGTCCTTCTTAGCAGCCTCCCTGTCCTCTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431727       <-- TCTCTTTGGGCTTCTTGGTGTCCTTCTTAGCAGCCTCCCTGTCCTCTGCA  Raphanus sativus cv GSK3-1
FY439915       <-- ..................................................  Raphanus sativus cv GSK3-1
FY433115       <-- TCTCTTTGGGCTTCTTGGTGTCCTTCTTAGCAGCCTCCCTGTCCTCTGCA  Raphanus sativus cv GSK3-1
FY437592       <-- TCTCTTTGGGCTTCTTGGTGTCCTTCTTAGCAGCCTCCCTGTCCTCTGCA  Raphanus sativus cv GSK3-1
FD578762       <-- TCTCTTTGGGCTTCTTGGTGTCCTTCTTAGCAGCCTCCCTCTCCTCTGCA  Raphanus sativus cv Rat-Tail Radish #3870
FD580062       <-- TCTCTTTGGGCTTCTTGGTGTCCTTCTTAGCAGCCTCCCTCTCCTCTGCA  Raphanus sativus cv Rat-Tail Radish #3870
FD577794       <-- TCTCTTTGGGCTTCTTGGTGTCCTTCTTAGCGGCCTCCCTGTCCTCTGCA  Raphanus sativus cv Rat-Tail Radish #3870
FD956049       <-- TCTCTTTGGGCTTCTTGGTGTCCTTCTTAGCAGCCTCCCTGTCCTCTGCA  Raphanus sativus cv Rat-Tail Radish #3870
EW721790       --> TCTCTTTGGGCTTCTTGGTGTCCTTCTTAGCAGCCTCCCTCTCCTCTGCA  Raphanus sativus var. oleiformis
FD582042       --> TCTCTTTGGGCTTCTTGGTGTCCTTCTTAGCGGCCTCCCTGTCCTCTGCA  Raphanus sativus cv Rat-Tail Radish #3870
FD952003       --> TCTCTTTGGGCTTCTTGGTGTCCTTCTTAGCAGCCTCCCTGTCCTCTGCA  Raphanus sativus cv Rat-Tail Radish #3870
FD582873       --> TCTCTTTGGGCTTCTTGGTGTCCTTCTTAGCAGCCTCCCTCTCCTCTGCA  Raphanus sativus cv Rat-Tail Radish #3870
EY926996       --> TCTCTTTGGGCTTCTTGGTGTCCTTCTTAACAGCCTCCCTCTCCTCTGCA  Raphanus sativus var. oleiformis

               501    -    551
UN16240        --> GCTTTCTTTTCCTCCTCGGTCTCGTCACCAAACAGATCCATGTCATCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431727       <-- GCTTTCTTTTCCTCCTCGGTCTCGTCACCAAACAGATCCATGTCATCATC
FY439915       <-- ..................................................
FY433115       <-- GCTTTCTTTTCCTCCTCGGTCTCGTCACCAAACAGATCCATGTCATCATC
FY437592       <-- GCTTTCTTTTCCTCCTCGGTCTCGTCACCAAACAGATCCATGTCATCATC
FD578762       <-- GCTTTCTTTTCCTCCTCGGTCTCGTCACCAAACCGATCCATGTCATCATC
FD580062       <-- GCTTTCTTTTCCTCCTCGGTCTCGTCACCAAACAGATCCATGTCATCATC
FD577794       <-- GCTTTCTTTTCCTCCTCGGTCTCGTCACCAAACAGATCCATGTCGTCATC
FD956049       <-- GCTTTCTTTTCCTCCTCGGTCTCGTCACCAAACAGATCCATGTCATCATC
EW721790       --> GCTTTCTTTTCCTCCTCGGTCTCGTCACCAAACAGATCCATGTCATCATC
FD582042       --> GCTTTCTTTTCCTCCTCGGTCTCGTCACCAAACAGATCCATGTCGTCATC
FD952003       --> GCTTTCTTTTCCTCCTCGGTCTCGTCACCAAACAGATCCATGTCATCATC
FD582873       --> GCTTTCTTTTCCTCCTCGGTCTCGTCACCAAACCGATCCATGTCATCATC
EY926996       --> GCTTTCTTTTCCTCCTCGGTCTCGTCACCAAACAAATCCATGCCATCATC

               551    -    601
UN16240        --> ATCATCAGCTGCAGCTACTGCGGGTGCCTCAGCTTGAGCAGGAGCAGTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431727       <-- ATCATCAGCTGCAGCTACTGCGGGTGCCTCAGCTTGAGCAGGAGCAGTAG
FY439915       <-- ..................................................
FY433115       <-- ATCATCAGCTGCAGCTACTGCGGGTGCCTCAGCTTGAGCAGGAGCAGTAG
FY437592       <-- ATCATCAGCTGCAGCTACTGCGGGTGCCTCAGCTTGAGCAGGAGCAGTAG
FD578762       <-- ATCAT------CAGCTACTGCAGGTGCCTCAGCTTGGGCAGGAGCAGCAG
FD580062       <-- ATCAT------CAGCTACTGCAGGTGCCTCAGCTTGGGCAGGAGCAGCAG
FD577794       <-- ATCATCAGCTGCAGCTACTGCGGGTGCCTCAGCTTGAGCAGGAGCAGTAG
FD956049       <-- ATCATCAGCTGCAGCTACTGCGGGTGCCTCAGCTTGAGCAGGAGCAGTAG
EW721790       --> ATCATCAGCT------ACTGCAGGTGTCTCAGCTTGGGCAGGAGCAGTAG
FD582042       --> ATCATCAGCTGCAGCTACTGCGGGTGCCTCAGCTTGAGCAGGAGCAGTAG
FD952003       --> ATCATCAGCTGCAGCTACTGCGGGTGCCTCAGCTTGAGCAGGAGCAGTAG
FD582873       --> ATCATCAGCT------ACTGCAGGTGCCTCAGCTTGGGCAGGAGCAGca.
EY926996       --> ATCATCAGCTactgcaggtgc.............................

               601    -    651
UN16240        --> CAGAGCCACCGATTGAAACTCCTACGGCTTTACCAGGGAAACTTTTAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431727       <-- CAGAGCCACCGATTGAAACTCCTACGGCTTTACCAGGGAAACTTTTAGCA
FY439915       <-- ..................................................
FY433115       <-- CAGAGCCACCGATTGAAACTCCTACGGCTTTACCAGGGAAACTTTTAGCA
FY437592       <-- CAGAGCCACCGATTGAAACTCCTACGGCTTTACCAGGGAAACTTTTAGCA
FD578762       <-- CAGAGCCACCGATTGAAACTCCTACGGCTTTACCAGGGAAACTTTTAGCA
FD580062       <-- CAGAGCCACCGATTGAAACTCCTACGGCTTTACCAGGGAAACTTTTAGCA
FD577794       <-- CAGAGCCACCGATTGAAACTCCTACGGCTTTACCAGGGAAACTTTTAGCA
FD956049       <-- CAGAGCCACCGATTGAAACTCCTACGGCTTTACCAGGGAAACTTTTAGCA
EW721790       --> CAGAGCCACCGATTGAAACTCCTACGGCTTTACCAGGGAAACTTTTAGCA
FD582042       --> CAG...............................................
FD952003       --> CAGAGCCACCGATTGAAACTCCTACGGCTTTACCAGGGAAACTTTTAGCA
FD582873       --> ..................................................
EY926996       --> ..................................................

               651    -    701
UN16240        --> AGGTGGGAGGCGACACAGTCGTACCACTTGCTAGCATTAGGGAAACTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431727       <-- AGGTGGGAGGCGACACAGTCGTACCACTTGCTAGCATTAGGGAAACTCTC
FY439915       <-- ..................................................
FY433115       <-- AGGTGGGAGGCGACACAGTCGTACCACTTGCTAGCATTAGGGAAACTCTC
FY437592       <-- AGGTGGGAGGCGACACAGTCGTACCACTTGCTAGCATTAGGGAAACTCTC
FD578762       <-- AGGTGGGAGGTAACACAGGCGTACCACTTGCTAGCATTAGGGAAACTCTC
FD580062       <-- AGGTGGGAGGTAACACAGGCGTACCACTTGCTAGCATTAGGGAAACTCTC
FD577794       <-- AGGTGGGAGGCGACACAGTCGTACCACTTGCTAGCGTTAGGGAAACTCTC
FD956049       <-- AGGTGGGAGGCGACACAGTCGTACCACTTGCTAGCGTTAGGGAAACTCTC
EW721790       --> AGGTGGGAGGTAACACAGGCGTACCACTTGCTAGCATTAGGGAAACTCTC
FD582042       --> ..................................................
FD952003       --> AGGTGGGAGGCGACACAGTCGTACCACTTGCTAGCGTTAGGGAAACTCTC
FD582873       --> ..................................................
EY926996       --> ..................................................

               701    -    751
UN16240        --> GCTTGGTTTCTCAACAACGGCAGCGTATACCTTCACATCATCTACAGACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431727       <-- GCTTGGTTTCTCAACAACGGCAGCGTATACCTTCACATCATCTACAGACA
FY439915       <-- ..................................................
FY433115       <-- GCTTGGTTTCTCAACAACGGCAGCGTATACCTTCACATCATCTACAGACA
FY437592       <-- GCTTGGTTTCTCAACAACGGCAGCGTATACCTTCACATCATCTACAGACA
FD578762       <-- GCTTGGCTTCTCAACAACGGCAGCGTATACCTTCACATCATCTACAGACA
FD580062       <-- GCTTGGTTTCTCAACAACGGCAGCGTATACCTTCACATCATCTACAGACA
FD577794       <-- GCTTGGTTTCTCAACAACGGCAGCGTATACCTTCACATCATCTACAGACA
FD956049       <-- GCTTGGTTTCTCAACAACGGCAGCGTATACCTTCACATCATCTACAGACA
EW721790       --> GCTTGGTTTCTCAACAACGGCAGCGTATACCTTCACATCATCTACAGACA
FD582042       --> ..................................................
FD952003       --> GCTTGGTTTCTCAACAACGGCAGCGTATACCTTCACATCATCTACAGACA
FD582873       --> ..................................................
EY926996       --> ..................................................

               751    -    801
UN16240        --> ATTGATCTCCGGAGATGTAGGTTTTTCCGACGAGGTGCTCCTCCACGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431727       <-- ATTGATCTCCGGAGATGTAGGTTTTCCCGACGAGGTGCTCCTCAACGGAT
FY439915       <-- ..................................................
FY433115       <-- ATTGATCTCCGGAGATGTAGGTTTTCCCGACGAGGTGCTCCTCAACGGAT
FY437592       <-- ATTGATCTCCGGAGATGTAGGTTTTCCCGACGAGGTGCTCCTCAACGGAT
FD578762       <-- ATTTATCTCCGGAGATGTAGGTTTTTCCGACGAGGTGCTCCTCCACGGAT
FD580062       <-- ATTTATCTCCGGAGATGTAGGTTTTTCCGACGAGGTGCTCCTCCACGGAT
FD577794       <-- ATTGTTCTCCGGAGATGTAGGTTTTTCCGACGAGGTGCTCCTCCACGGAT
FD956049       <-- ATTGTTCTCCGGAGATGTAGGTTTTTCCGACGAGGTGCTCCTCCACGGAT
EW721790       --> ATTTATCTCCGGAGAT..................................
FD582042       --> ..................................................
FD952003       --> ATTGTTCTCCGGAGATGT................................
FD582873       --> ..................................................
EY926996       --> ..................................................

               801    -    851
UN16240        --> TTGAGACCCTGCTCTGTGTGTAGATCTGAAAAGGTCACCGCCATTGTAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431727       <-- TTGAGACCCTGCTCTGTGTGTAGATCTGAAAAGGTAACCGCC........
FY439915       <-- ..................................................
FY433115       <-- TTGAGACCCTGCTCTGTGTGTAGATCTGAAAAGGTAACCGCCAT-GTAGC
FY437592       <-- TTGAGACCCTGCTCTGTGTGTAGATCTGAAAAGGTAACCGCCA.......
FD578762       <-- TTGAGACCCTGCTCTGTGTGTAGATCTGAAAAGGTCACCGCCATTGTAGC
FD580062       <-- TTGAGACCCTGCTCTGTGTGTAGATCTGAAAAGGTCACCGCCATTGTAGC
FD577794       <-- TTGAGACCCTGCTCTGTGTGTAGATCTGAAAAGGTCACCGCCATTGTAGC
FD956049       <-- TTGAGACCCTGCTCTGTGTGTAGATCTGAAAAGGTCACCGCCATTGTAGC
EW721790       --> ..................................................
FD582042       --> ..................................................
FD952003       --> ..................................................
FD582873       --> ..................................................
EY926996       --> ..................................................

               851    -    901
UN16240        --> TAGCTGCTGCTTTAGTGAGTTAGGTGAAAGAGAGAGAGAGAGAGAGAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431727       <-- ..................................................
FY439915       <-- ..................................................
FY433115       <-- -GGCTGCTGC........................................
FY437592       <-- ..................................................
FD578762       <-- TAGCTGCTttagtaagtta...............................
FD580062       <-- TAGCTGCTttagtaagctaggtgtcc........................
FD577794       <-- TAGCTGCTGCTTTAGTGAGTTAGGTGAAAGAGAGAGAGAGAGAGAGAGcc
FD956049       <-- TAGCTGCTGCTTTAGTGAGTTAGGTGAAAGAGAGAGAGAGAGAGAGAGAG
EW721790       --> ..................................................
FD582042       --> ..................................................
FD952003       --> ..................................................
FD582873       --> ..................................................
EY926996       --> ..................................................

               901    -    951
UN16240        --> AGCAAGCTGCTTGAGAACGTACACTATAACCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431727       <-- ..................................
FY439915       <-- ..................................
FY433115       <-- ..................................
FY437592       <-- ..................................
FD578762       <-- ..................................
FD580062       <-- ..................................
FD577794       <-- cct...............................
FD956049       <-- AGCAAGCTGCTTGAGAACGTACACTATAACCTCC
EW721790       --> ..................................
FD582042       --> ..................................
FD952003       --> ..................................
FD582873       --> ..................................
EY926996       --> ..................................