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Alignment for radish unigene UN16257

               1      -     51
UN16257        --> GGACACACGTGGCAGGAAAAAACATAATCTTCGAGATTTTCTTCCTTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540308       <-- ..................................................
EV574351       <-- ..................................................
FY429694       <-- ..................................................
FD952372       <-- ..................................................
FD985447       <-- ..................................................
EX899844       <-- ..................................................
FD944843       <-- ..................................................
FD546102       <-- ..................................................
EX777068       <-- ..................................................
FD583135       <-- ..................................................
FY430036       <-- ..................................................
EX892235       <-- ..................................................
EV539655       <-- ..................................................
FD544925       <-- ..................................................
EY919944       <-- ..................................................
EY920772       <-- ..................................................
EY911909       <-- ..................................................
EY903362       <-- ..................................................
EX899560       <-- ..................................................
EY905823       --> GGACACACGTGGCAGGAAAAAACATAATCTTCGAGATTTTCTTCCTTTTT
EY907320       --> ..................................................
FD971860       --> ..................................................
FD544369       --> ..................................................
HS106967       --> ..................................................
HS106970       --> ..................................................
FY452281       --> ..................................................
FY437001       --> ..................................................
FD956504       --> ..................................................
FD958001       --> ..................................................
FD548782       --> ..................................................
EW734782       --> ..................................................
EW735539       --> ..................................................
EY924259       --> ..................................................
EY925255       --> ..................................................
EX895469       --> ..................................................

               51     -    101
UN16257        --> TTTCCCTTTCCCGGAAAAAAAATCAATTTTCTTGTTGAGTTGAGCCGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540308       <-- ..................................................
EV574351       <-- ..................................................
FY429694       <-- ..................................................
FD952372       <-- ..................................................
FD985447       <-- ..................................................
EX899844       <-- ..................................................
FD944843       <-- ..................................................
FD546102       <-- ..................................................
EX777068       <-- ..................................................
FD583135       <-- ..................................................
FY430036       <-- ..................................................
EX892235       <-- ..................................................
EV539655       <-- ..................................................
FD544925       <-- ..................................................
EY919944       <-- ..................................................
EY920772       <-- ..................................................
EY911909       <-- ..................................................
EY903362       <-- ..................................................
EX899560       <-- ..................................................
EY905823       --> TTTCCCTTTCCCGGAAAAAAAATCAATTTTCTTGTTGAGTTGAGCCGAAG
EY907320       --> ......................ggAATTTTCTTGTTGAGTTGAGCCGAAG
FD971860       --> ..................................................
FD544369       --> ..................................................
HS106967       --> ..................................................
HS106970       --> ..................................................
FY452281       --> ..................................................
FY437001       --> ..................................................
FD956504       --> ..................................................
FD958001       --> ..................................................
FD548782       --> ..................................................
EW734782       --> ..................................................
EW735539       --> ..................................................
EY924259       --> ..................................................
EY925255       --> ..................................................
EX895469       --> ..................................................

               101    -    151
UN16257        --> GAAGAAGGGAGATAGAACGATTTGGGTGTTTTCTCTCACTACTAAGCTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540308       <-- ..................................................
EV574351       <-- ..................................................
FY429694       <-- ..................................................
FD952372       <-- ..................................................
FD985447       <-- ..................................................
EX899844       <-- ..................................................
FD944843       <-- ..................................................
FD546102       <-- ..................................................
EX777068       <-- ..................................................
FD583135       <-- ..................................................
FY430036       <-- ..................................................
EX892235       <-- ..................................................
EV539655       <-- ..................................................
FD544925       <-- ..................................................
EY919944       <-- ..................................................
EY920772       <-- ..................................................
EY911909       <-- ..................................................
EY903362       <-- ..................................................
EX899560       <-- ..................................................
EY905823       --> GAAGAAGGGAGATAGAACGATTTGGGTGTTTTCTCTCACTACTAAGCTAA
EY907320       --> GAAGAAGAGAGATAGAACGATTTGGGTGTTTTCTCTCACTACTAAGCTAA
FD971860       --> ...........ggAGAACGATTTGGGTGTTTTCTCTCACTACTAAGCTAA
FD544369       --> ..............................TTCTCTCACTACTAAGCTAA
HS106967       --> ..........................gcacgaggCTCACTACTAAGCTAA
HS106970       --> ..................................................
FY452281       --> ..................................................
FY437001       --> ..................................................
FD956504       --> ..................................................
FD958001       --> ..................................................
FD548782       --> ..................................................
EW734782       --> ..................................................
EW735539       --> ..................................................
EY924259       --> ..................................................
EY925255       --> ..................................................
EX895469       --> ..................................................

               151    -    201
UN16257        --> ACCCACCACCACCAACCCTTTTTGGGGGATTCTAGTGGGGAGAAAGAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540308       <-- ..................................................
EV574351       <-- ..................................................
FY429694       <-- ..................................................
FD952372       <-- ..................................................
FD985447       <-- ..................................................
EX899844       <-- ..................................................
FD944843       <-- ..................................................
FD546102       <-- ..................................................
EX777068       <-- ..................................................
FD583135       <-- ..................................................
FY430036       <-- ..................................................
EX892235       <-- ..................................................
EV539655       <-- ..................................................
FD544925       <-- ..................................................
EY919944       <-- ..................................................
EY920772       <-- ..................................................
EY911909       <-- ..................................................
EY903362       <-- ..................................................
EX899560       <-- ..................................................
EY905823       --> ACCCACCACCACCAACCCTTTTTGGGGGATTCTAGTGGGGAGAAAGAAGC
EY907320       --> ACCCACCACCACCAACCCTTTTTGGGGGATTCTAGTGGGGAGAAAGAAGC
FD971860       --> GCCCACCACCACCAACCCTTTTTGGGGGATTCTAGTGGGGAGAAAGAAGC
FD544369       --> ACCCACCACCACCAACCCTTTTTGGGGGATTCTAGTGGGGAGAAAGAAGC
HS106967       --> ACCCACCACCA---ACCCTTTTTGGGGGATTCTAGTG-AGAGAAAGAAGC
HS106970       --> ....gcacgaggCAACCCTTTTTGGGGGATTCTAGTG-AGAGAAAGAAGC
FY452281       --> .......................................agagAAGAAGC
FY437001       --> ..................................................
FD956504       --> ..................................................
FD958001       --> ..................................................
FD548782       --> ..................................................
EW734782       --> ..................................................
EW735539       --> ..................................................
EY924259       --> ..................................................
EY925255       --> ..................................................
EX895469       --> ..................................................

               201    -    251
UN16257        --> TT-GAATCTTACTCTTTATTTGAAAAA--GAAGGAATAGAATCTAGAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540308       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV574351       <-- ..................................................  Raphanus raphanistrum subsp. landra
FY429694       <-- ..................................................  Raphanus sativus cv GSK3-1
FD952372       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD985447       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX899844       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD944843       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD546102       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777068       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD583135       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY430036       <-- ..................................................  Raphanus sativus cv GSK3-1
EX892235       <-- ..................................................  Raphanus sativus var. oleiformis
EV539655       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544925       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY919944       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY920772       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY911909       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY903362       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX899560       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY905823       --> TT-GAATCTTACTCTTTATTTGAAAAA--GAAGGAATAGAATCTAGAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907320       --> TT-GAATCTTACTCTTTATTTGAAAAA--GAAGGAATAGAATCTAGAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD971860       --> TT-GAATCTTACTCTTTATTTGAAAAA--GAAGGAATAGAATCTAGAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544369       --> TT-GAATCTTACTCTTTATTTGAAAAA--GAAGGAATAGAATCTAGAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
HS106967       --> TTTGAATCTTTCTCTTTTTTTGAAAAAAAGAAGGAATAGAATCTAGAGTA  Raphanus sativus var. niger
HS106970       --> TTTGAATCTTTCTCTTTTTTTGAAAAAAAGAAGGAATAGAATCTAGAGTA  Raphanus sativus var. niger
FY452281       --> TTTGAATCTTTCTCTTTTTTTGAAAAA-AGAAGGAATAGAATCTAGAGTA  Raphanus sativus cv GSK3-1
FY437001       --> ......................................GAATCTAGAGTA  Raphanus sativus cv GSK3-1
FD956504       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD958001       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD548782       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734782       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW735539       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY924259       --> ..................................................  Raphanus raphanistrum subsp. landra
EY925255       --> ..................................................  Raphanus raphanistrum subsp. landra
EX895469       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               251    -    301
UN16257        --> TCGGATATGTCGAGCTCAGTATCCACTTCGTTGTGCTGTTCGTCAACCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540308       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV574351       <-- ..................................................  Raphanus raphanistrum subsp. landra
FY429694       <-- ..................................................  Raphanus sativus cv GSK3-1
FD952372       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD985447       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX899844       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD944843       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD546102       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777068       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD583135       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY430036       <-- ..................................................  Raphanus sativus cv GSK3-1
EX892235       <-- ..................................................  Raphanus sativus var. oleiformis
EV539655       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544925       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY919944       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY920772       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY911909       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY903362       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX899560       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY905823       --> TCGGAAATGTCGAGCTCAGTATCCACTTCGTTGTGCTGTTCGTCAACCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907320       --> TCGGAAATGTCGAGCTCAGTATCCACTTCGTTGTGCTGTTCGTCAACCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD971860       --> TCGGAAATGTCGAGCTCAGTATCCACTTCGTTGTGCTGTTCGTCAACCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544369       --> TCGGAAATGTCGAGCTCAGTATCCACTTCGTTGTGCTGTTCGTCAACCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
HS106967       --> TCGGATATGTCGAGCTCAGTATCCACTTCGTTGTGCTGTTCGTCAACCCA  Raphanus sativus var. niger
HS106970       --> TCGGATATGTCGAGCTCAGTATCCACTTCGTTGTGCTGTTCGTCAACCCA  Raphanus sativus var. niger
FY452281       --> TCGGATATGTCGAGCTCAGTATCCACTTCGTTGTGCTGTTCGTCAACCCA  Raphanus sativus cv GSK3-1
FY437001       --> TCGGATATGTCGAGCTCAGTATCCACTTCGTTGTGCTGTTCGTCAACCCA  Raphanus sativus cv GSK3-1
FD956504       --> .....gATGTCGAGCTCAGTATCCACTTCGTTGTGCTGTTCGTCAACCCA  Raphanus sativus cv Rat-Tail Radish #3870
FD958001       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD548782       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734782       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW735539       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY924259       --> ..................................................  Raphanus raphanistrum subsp. landra
EY925255       --> ..................................................  Raphanus raphanistrum subsp. landra
EX895469       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               301    -    351
UN16257        --> GGTCAATGGGTTCGGGTTTAGGCCTCAAAGGTCGCTCCTTTACCAACCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540308       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV574351       <-- ..................................................  Raphanus raphanistrum subsp. landra
FY429694       <-- ..................................................  Raphanus sativus cv GSK3-1
FD952372       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD985447       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX899844       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD944843       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD546102       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777068       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD583135       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY430036       <-- ..................................................  Raphanus sativus cv GSK3-1
EX892235       <-- ..................................................  Raphanus sativus var. oleiformis
EV539655       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544925       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY919944       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY920772       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY911909       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY903362       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX899560       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY905823       --> GGTCAATGGGTTCGGTCTTAGGCCTCAAAGGTCCCTCCTTTACCAACCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907320       --> GGTCAATGGGTTCGGTCTTAGGCCTCAAAGGTCCCTCCTTTACCAACCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD971860       --> GGTCAATGGGTTCGGTCTTAGGCCTCAAAGGTCCCTCCTTTACCAACCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544369       --> GGTCAATGGGTTCGGTCTTAGGCCTCAAAGGTCCCTCCTTTACCAACCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
HS106967       --> GGTCAATGGGTTCGGGTTTAGGCCTCAAAGGTCGCTCCTTTACCAACCCA  Raphanus sativus var. niger
HS106970       --> GGTCAATGGGTTCGGGTTTAGGCCTCAAAGGTCGCTCCTTTACCAACCCA  Raphanus sativus var. niger
FY452281       --> GGTCAATGGGTTCGGGTTTAGGCCTCAAAGGTCGCTCCTTTACCAACCCA  Raphanus sativus cv GSK3-1
FY437001       --> GGTCAATGGGTTCGGGTTTAGGCCTCAAAGGTCGCTCCTTTACCAACCCA  Raphanus sativus cv GSK3-1
FD956504       --> GGTCAATGGGTTCGGGTTTAGGCCTCAAAGGTCGCTCCTTTACCAACCCA  Raphanus sativus cv Rat-Tail Radish #3870
FD958001       --> .............GGGTTTAGGCCTCAAAGGTCGCTCCTTTACCAACCCA  Raphanus sativus cv Rat-Tail Radish #3870
FD548782       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734782       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW735539       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY924259       --> ..................................................  Raphanus raphanistrum subsp. landra
EY925255       --> ..................................................  Raphanus raphanistrum subsp. landra
EX895469       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               351    -    401
UN16257        --> CTTCCTTTTCTTCTTTCTCCAGAAGGAGAACTCATGGCGGTGTTGTGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540308       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV574351       <-- ..................................................  Raphanus raphanistrum subsp. landra
FY429694       <-- ..................................................  Raphanus sativus cv GSK3-1
FD952372       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD985447       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX899844       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD944843       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD546102       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777068       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD583135       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY430036       <-- ..................................................  Raphanus sativus cv GSK3-1
EX892235       <-- ..................................................  Raphanus sativus var. oleiformis
EV539655       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544925       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY919944       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY920772       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY911909       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY903362       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX899560       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY905823       --> CTTCCTTTTCTTCTTTCTCCAGAAGGAGAACTCATGG---TGTTGTGAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907320       --> CTTCCTTTTCTTCTTTCTCCAGAAGGAGAACTCATGG---TGTTGTGAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD971860       --> CTTCCTTTTCTTCTTTCTCCAGAAGGAGAACTCATGG---TGTTGTGAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544369       --> CTTCCTTTTCTTCTTTCTCCAGAAGGAGAACTCATGG---TGTTGTGAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
HS106967       --> CTTCCTTTTCTTCTTTCTCCAG---GAGAACTCATGGCGGTGTTGTGAAG  Raphanus sativus var. niger
HS106970       --> CTTCCTTTTCTTCTTTCTCCAGAAGGAGAACTCATGGCGGTGTTGTGAAG  Raphanus sativus var. niger
FY452281       --> CTTCCTTTTCTTCTTTCTCCAGAAGGAGAACTCATGGCGGTGTTGTGAAG  Raphanus sativus cv GSK3-1
FY437001       --> CTTCCTTTTCTTCTTTCTCCAGAAGGAGAACTCATGGCGGTGTTGTGAAG  Raphanus sativus cv GSK3-1
FD956504       --> CTTCCTTTTCTTCTTTCTCCAGAAGGAGAACTCATGGCGGTGTTGTGAAG  Raphanus sativus cv Rat-Tail Radish #3870
FD958001       --> CTTCCTTTTCTTCTTTCTCCAGAAGGAGAACTCATGGCGGTGTTGTGAAG  Raphanus sativus cv Rat-Tail Radish #3870
FD548782       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734782       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW735539       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY924259       --> ..................................................  Raphanus raphanistrum subsp. landra
EY925255       --> ..................................................  Raphanus raphanistrum subsp. landra
EX895469       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               401    -    451
UN16257        --> GCCACAGCTCGTGTTGATAAGTATTCCAAGAGTGATATCATCGTCTCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540308       <-- ..................................................
EV574351       <-- ..................................................
FY429694       <-- ..................................................
FD952372       <-- ..................................................
FD985447       <-- ..................................................
EX899844       <-- ..................................................
FD944843       <-- ..................................................
FD546102       <-- ..................................................
EX777068       <-- ..................................................
FD583135       <-- ..................................................
FY430036       <-- ..................................................
EX892235       <-- ..................................................
EV539655       <-- ..................................................
FD544925       <-- ..................................................
EY919944       <-- ..................................................
EY920772       <-- ..................................................
EY911909       <-- ..................................................
EY903362       <-- ..................................................
EX899560       <-- ..................................................
EY905823       --> GCCACAGCTCGTGTTGATAAGTATTCCAAGAGTGATATCATCGTCTCTCC
EY907320       --> GCCACAGCTCGTGTTGATAAGTATTCCAAGAGTGATATCATCGTCTCTCC
FD971860       --> GCCACAGCTCGTGTTGATAAGTATTCCAATAGTGATATCATCGTCTCTCC
FD544369       --> GCCACAGCTCGTGTTGATAAGTATTCCAAGAGTGATATCATCGTCTCTCC
HS106967       --> GCCACAGCTCGTGTTGATAAGTATTCCAAGAGTGATATCATCGTCTCTCC
HS106970       --> GCCACAGCTCGTGTTGATAAGTATTCCAAGAGTGATATCATCGTCTCTCC
FY452281       --> GCCACAGCTCGTGTTGATAAGTATTCCAAGAGTGATATCATCGTCTCTCC
FY437001       --> GCCACAGCTCGTGTTGATAAGTATTCCAAGAGTGATATCATCGTCTCTCC
FD956504       --> GCCACAGCTCGTGTTGATAAGTATTCCAAGAGTGATATCATCGTCTCTCC
FD958001       --> GCCACAGCTCGTGTTGATAAGTATTCCAAGAGTGATATCATCGTCTCTCC
FD548782       --> ..................................................
EW734782       --> ..................................................
EW735539       --> ..................................................
EY924259       --> ..................................................
EY925255       --> ..................................................
EX895469       --> ..................................................

               451    -    501
UN16257        --> CTCCATTCTCTCTGCTAATTTCGCCAAACTAGGCGAGCAGGTAAAAGCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540308       <-- ..........TCTGCTAATTTCGCCAAATTAGGCGAGCAGGTAAAAGCAG
EV574351       <-- .......................CCAAACTAGGCGAGCAGGTAAAAGCAG
FY429694       <-- ..................................................
FD952372       <-- ..................................................
FD985447       <-- ..................................................
EX899844       <-- ..................................................
FD944843       <-- ..................................................
FD546102       <-- ..................................................
EX777068       <-- ..................................................
FD583135       <-- ..................................................
FY430036       <-- ..................................................
EX892235       <-- ..................................................
EV539655       <-- ..................................................
FD544925       <-- ..................................................
EY919944       <-- ..................................................
EY920772       <-- ..................................................
EY911909       <-- ..................................................
EY903362       <-- ..................................................
EX899560       <-- ..................................................
EY905823       --> CTCCATTCTCTCTGCTAATTTCGCCAAACTAGGCGAGCAGGTAAAAGCAG
EY907320       --> CTCCATTCTCTCTGCTAATTTCGCCAAACTAGGCGAGCGGGTAAAAGCAG
FD971860       --> CTCCATTCTCTCTGCTAATTTCGCCAAACTAGGC---CAGGTAAAAGCAG
FD544369       --> CTCCATTCTCTCTGCTAATTTCGCCAAACTAGGCGAGCAGGTAAAAGCAG
HS106967       --> CTCCATTCTCTCTGCTAATTTCGCCAAACTAGGCGAGCAGGTAAAAGCAG
HS106970       --> CTCCATTCTCTCTGCTAATTTCGCCAAACTAGGCGAGCAGGTAAAAGCAG
FY452281       --> CTCCATTCTCTCTGCTAATTTCGCCAAACTAGGCGAGCAGGTAAAAGCAG
FY437001       --> CTCCATTCTCTCTGCTAATTTCGCCAAACTAGGCGAGCAGGTAAAAGCAG
FD956504       --> CTCCATTCTCTCTGCTAATTTCGCCAAACTAGGCGAGCAGGTAAAAGCAG
FD958001       --> CTCCATTCTCTCTGCTAATTTCGCCAAACTAGGCGAGCAGGTAAAAGCAG
FD548782       --> ..................................................
EW734782       --> ..................................................
EW735539       --> ..................................................
EY924259       --> ..................................................
EY925255       --> ..................................................
EX895469       --> ..................................................

               501    -    551
UN16257        --> TAGAGTGTGCAGGTTGTGATTGGATCCATGTTGATGTGATGGATGGTCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540308       <-- TAGAGTGTGCAGGTTGTGATTGGATCCATGTTGATGTGATGGATGGTCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV574351       <-- TAGAGTGTGCAGGTTGTGATTGGATCCATGTTGATGTGATGGATGGTCGT  Raphanus raphanistrum subsp. landra
FY429694       <-- .....................................GATGGATGGTCGT  Raphanus sativus cv GSK3-1
FD952372       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD985447       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX899844       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD944843       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD546102       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777068       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD583135       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY430036       <-- ..................................................  Raphanus sativus cv GSK3-1
EX892235       <-- ..................................................  Raphanus sativus var. oleiformis
EV539655       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544925       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY919944       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY920772       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY911909       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY903362       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX899560       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY905823       --> TAGAGTGTGCAGGTTGTGATTGGATCCATGTTGATGTGATGGATGGTCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907320       --> TAGAGTGTGCAGGTTGTGATTGGATCCATGTTGATGTGATGGATGGTCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD971860       --> TAGAGTGTGCAGGTTGTGATTGGATCCATGTTGATGTGATGGATGGTCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544369       --> TAGAGTGTGCAGGTTGTGATTGGATCCATGTTGATGTGATGGATGGTCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
HS106967       --> TGGAGTGTGCAGGTTGTGATTGGATCCATGTTGATGTGATGGATGGTCGT  Raphanus sativus var. niger
HS106970       --> TGGAGTGTGCAGGTTGTGATTGGATCCATGTTGATGTGATGGATGGTCGT  Raphanus sativus var. niger
FY452281       --> TGGAGTGTGCAGGTTGTGATTGGATCCATGTTGATGTGATGGATGGTCGT  Raphanus sativus cv GSK3-1
FY437001       --> TGGAGTGTGCAGGTTGTGATTGGATCCATGTTGATGTGATGGATGGTCGT  Raphanus sativus cv GSK3-1
FD956504       --> TGGAGTGTGCAGGTTGTGATTGGATCCATGTTGATGTGATGGATGGTCGT  Raphanus sativus cv Rat-Tail Radish #3870
FD958001       --> TGGAGTGTGCAGGTTGTGATTGGATCCATGTTGATGTGATGGATGGTCGT  Raphanus sativus cv Rat-Tail Radish #3870
FD548782       --> TAGAGTGTGCAGGTTGTGATTGGATCCATGTTGATGTGATGGATGGTCGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734782       --> ...................................GTGATGGATGGTCGT  Raphanus sativus cv Rat-Tail Radish #3870
EW735539       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY924259       --> ..................................................  Raphanus raphanistrum subsp. landra
EY925255       --> ..................................................  Raphanus raphanistrum subsp. landra
EX895469       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               551    -    601
UN16257        --> TTTGTTCCCAACATCACTATTGGACCTCTTGTGGTTGATGCTTTGCGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540308       <-- TTTGTTCCCAACATCACTATTGGACCTCTCGTGGTTGATGCTTTGCGTCC
EV574351       <-- TTTGTTCCCAACATCACTATTGGACCTCTTGTGGTTGATGCTTTGCGTCC
FY429694       <-- TTTGTCCCCAACATCACTATTGGACCTCTTGTGGTTGATGCTTTGCGTCC
FD952372       <-- .........................CTCTTGTGGTTGATGCTTTGCGTCC
FD985447       <-- ...........................CTTGTGGTTGATGCTTTGCGTCC
EX899844       <-- ............................TTGTGGTTGATGCTTTGCGTCC
FD944843       <-- .............................TGTGGTTGATGCTTTGCGTCC
FD546102       <-- ..............................GTGGTTGATGCTTTGCGTC-
EX777068       <-- ..................................................
FD583135       <-- ..................................................
FY430036       <-- ..................................................
EX892235       <-- ..................................................
EV539655       <-- ..................................................
FD544925       <-- ..................................................
EY919944       <-- ..................................................
EY920772       <-- ..................................................
EY911909       <-- ..................................................
EY903362       <-- ..................................................
EX899560       <-- ..................................................
EY905823       --> TTTGTTCCCAACATCACTATTGGACCTCTTGTGGTTGATGCTTTGCGTCC
EY907320       --> TTTGTTCCCAACATCACTATTGGACCTCTTGTGGTTGATGCTTTGCGTCC
FD971860       --> TTTGTTCCCAACATCACTATTGGACCTCTTGTGGTTGATGCTTTGCGTCC
FD544369       --> TTTGTTCCCAACATCACTATTGGACCTCTTGTGGTTGATGCTTTGCGTCC
HS106967       --> TTTGTTCCCAACATCACTATTGGACCTCTTGTGGTTGATGCTTTGCGTCC
HS106970       --> TTTGTTCCCAACATCACTATTGGACCTCTTGTGGTTGATGCTTTGCGTCC
FY452281       --> TTTGTTCCCAACATCACTATTGGACCTCTTGTGGTTGATGCTTTGCGTCC
FY437001       --> TTTGTTCCCAACATCACTATTGGACCTCTTGTGGTTGATGCTTTGCGTCC
FD956504       --> TTTGTTCCCAACATCACTATTGGACCTCTTGTGGTTGATGCTTTGCGTCC
FD958001       --> TTTGTTCCCAACATCACTATTGGACCTCTTGTGGTTGATGCTTTGCGTCC
FD548782       --> TTTGTTCCCAACATCACTATTGGACCTCTTGTGGTTGATGCTTTGCGTCC
EW734782       --> TTTGTTCCCAACATCACTATTGGACCTCTTGTGGTTGATGCTTTGCGTCC
EW735539       --> ................gTATTGGACCTCTTGTGGTTGATGCTTTGCGTCC
EY924259       --> ..................................................
EY925255       --> ..................................................
EX895469       --> ..................................................

               601    -    651
UN16257        --> TGTTACTGATCTTCCTTTGGATGTTCATCTTATGATAGTGGAACCAGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540308       <-- TGTTACTGATCTTCCTTTGGATGTTCATCTTATGATAGTGGAACCAGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV574351       <-- TGTTACTGATCTTCCTCTGGATGTTCATCTTATGATAGTGGAACCAGATC  Raphanus raphanistrum subsp. landra
FY429694       <-- TGTTACTGATCTTCCTTTGGATGTTCATCTTATGATAGTGGAACCGGATC  Raphanus sativus cv GSK3-1
FD952372       <-- TGTTACTGATCTTCCTTTGGATGTTCATCTTACGATAGTGGAACCGGATC  Raphanus sativus cv Rat-Tail Radish #3870
FD985447       <-- TGTTACTGATCTTCCTTTGGATGTTCATCTCATGATAGTGGAACCGGATT  Raphanus raphanistrum subsp. landra
EX899844       <-- TGTTACTGATCTTCCTTTGGATGTTCATCTTATGATAGTGGAACCAGATC  Raphanus sativus cv Early Scarlet Globe
FD944843       <-- TGTTACTGATCTTCCTTTGGATGTTCATCTTATGATAGTGGAACCAGATC  Raphanus sativus cv Early Scarlet Globe
FD546102       <-- TGTTACTGATCTTCCTTTGGATGTTCATCTTATGATAGTGGAACCAGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777068       <-- ...TACTGATCTTCCTTTGGATGTTCATCTCATGATAGTGGAACCGGATT  Raphanus raphanistrum subsp. landra
FD583135       <-- ...TACTGATCTTCCTTTGGATGTTCATCTTATGATAGTGGAACCAGATC  Raphanus sativus cv Rat-Tail Radish #3870
FY430036       <-- ........................TCATCTTATGATAGTGGAACCGGATC  Raphanus sativus cv GSK3-1
EX892235       <-- ..................................................  Raphanus sativus var. oleiformis
EV539655       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544925       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY919944       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY920772       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY911909       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY903362       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX899560       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY905823       --> TGTTACTGATCTTCCTTTGGATGTTCATCTTATGATAGTGGAACCAGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907320       --> TGTTACTGATCTTCCTTTGGATGTTCATCTTATGATAGTGGAACCAGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD971860       --> TGTTACTGATCTTCCTTTGGATGTTCATCTTATGATAGTGGAACCAGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544369       --> TGTTACTGATCTTCCTTTGGATGTTCATCTTATGATAGTGGAACCAGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
HS106967       --> TGTTACTGATCTTCCTTTGGATGTTCATCTTATGATAGTGGAACCGGATC  Raphanus sativus var. niger
HS106970       --> TGTTACTGATCTTCCTTTGGATGTTCATCTTATGATAGTGGAACCGGATC  Raphanus sativus var. niger
FY452281       --> TGTTACTGATCTTCCTTTGGATGTTCATCTTATGATAGTGGAACCGGATC  Raphanus sativus cv GSK3-1
FY437001       --> TGTTACTGATCTTCCTTTGGATGTTCATCTTATGATAGTGGAACCGGATC  Raphanus sativus cv GSK3-1
FD956504       --> TGTTACTGATCTTCCTTTGGATGTTCATCTTACGATAGTGGAACCGGATC  Raphanus sativus cv Rat-Tail Radish #3870
FD958001       --> TGTTACTGATCTTCCTTTGGATGTTCATCTTATGATAGTGGAACCGGATC  Raphanus sativus cv Rat-Tail Radish #3870
FD548782       --> TGTTACTGATCTTCCTTTGGATGTTCATCTTATGATAGTGGAACCAGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734782       --> TGTTACTGATCTTCCTTTGGATGTTCATCTTATGATAGTGGAACCAGATC  Raphanus sativus cv Rat-Tail Radish #3870
EW735539       --> TGTTACTGATCTTCCTTTGGATGTTCATCTTATGATAGTGGAACCAGATC  Raphanus sativus cv Rat-Tail Radish #3870
EY924259       --> ..................................................  Raphanus raphanistrum subsp. landra
EY925255       --> ..................................................  Raphanus raphanistrum subsp. landra
EX895469       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               651    -    701
UN16257        --> TGAGGGTACCAGATTTCATCAAAGCAGGTGCAGACATCGTCAGTGTACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540308       <-- TGAGGGTACCAGATTTCATCAAAGCAGGTGCAGACATCGTCAGTTTACAC
EV574351       <-- TGAGGGTACCAGATTTCATCAAAGCAGGTGCAGACATCGTCAGTGTACAC
FY429694       <-- TGAGGGTACCAGATTTCATCAAAGCAGGTGCAGACATCGTCAGTGTACAC
FD952372       <-- TGAGGGTACCAGATTTCATCAAAGCAGGTGCAGACATCGTCAGTGTACAC
FD985447       <-- TGAGGGTACCAGATTTCATCAAAGCAGGTGCAGACATCGTCAGTGTACAC
EX899844       <-- TGAGGGTACCAGATTTCATCAAAGCAGGTGCAGACATCGTCAGTGTACAC
FD944843       <-- TGAGGGTACCAGATTTCATCAAAGCAGGTGCAGACATCGTCAGTGTACAC
FD546102       <-- TGAGGGTACCAGATTTCATCAAAGCAGGTGCAGACATCGTCAGTGTACAC
EX777068       <-- TGAGGGTACCAGATTTCATCAAAGCAGGTGCAGACATCGTCAGTGTACAC
FD583135       <-- TGAGGGTACCAGATTTCATCAAAGCAGGTGCAGACATCGTCAGTGTACAC
FY430036       <-- TGAGGGTACCAGATTTCATCAAAGCAGGTGCAGACATCGTCAGTGTACAC
EX892235       <-- TGAGGGTACCAGATTTCATCAAAGCAGGTGCAGACATCGTCAGTGTACAC
EV539655       <-- .GAGGGTACCAGATTTCATCAAAGCAGGTGCAGACATCGTCAGTGTACAC
FD544925       <-- ..................................................
EY919944       <-- ..................................................
EY920772       <-- ..................................................
EY911909       <-- ..................................................
EY903362       <-- ..................................................
EX899560       <-- ..................................................
EY905823       --> TGAGGGTACCAGATTTCATCAAA...........................
EY907320       --> TGAGGGTACCAGATTTCATCAAA...........................
FD971860       --> TGAGGGTACCAGATTTCATCAAA...........................
FD544369       --> TGAGGGTACCAGATTTCATCAAAGCAGGTGCAGACATCGTCAGTGTACAC
HS106967       --> TGAGGGTACCAGATTTCATCAAAGCAGGTGCAGACATCGTCAGTGTACAC
HS106970       --> TGAGGGTACCAGATTTCATCAAAGCAGGTGCAGACATCGTCAGTGTACAC
FY452281       --> TGAGGGTACCAGATTTCATCAAAGCAGGTGCAGACATCGTCAGTGTACAC
FY437001       --> TGAGGGTACCAGATTTCATCAAAGCAGGTGCAGACATCGTCAGTGTACAC
FD956504       --> TGAGGGTACCAGATTTCATCAAAGCAGGTGCAGACATCGTCAGTGTACAC
FD958001       --> TGAGGGTACCAGATTTCATCAAAGCAGGTGCAGACATCGTCAGTGTACAC
FD548782       --> TGAGGGTACCAGATTTCATCAAAGCAGGTGCAGACATCGTCAGTGTACAC
EW734782       --> TGAGGGTACCAGATTTCATCAAAGCAGGTGCAGACATCGTCAGTGTACAC
EW735539       --> TGAGGGTACCAGATTTCATCAAAGCAGGTGCAGACATCTTCAGTGTACAC
EY924259       --> ..................................................
EY925255       --> ..................................................
EX895469       --> ..................................................

               701    -    751
UN16257        --> TGTGAGCAGTCATCCACCATCCATTTGCACCGCACTGTCAATCAAATCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540308       <-- TGTGAGCAGTCATCCACCATCCATTTGCACCGCACTGTCAATCAAATCAA
EV574351       <-- TGTGAGCAGTCATCCACCATCCATTTGCACCGCACTGTCAATCAAATCAA
FY429694       <-- TGTGAGCAGTCATCCACCATCCATTTGCACCGCACTGTCAATCAAATCAA
FD952372       <-- TGTGAGCAGTCATCCACCATCCATTTGCACCGCACTGTCAATCAAATCAA
FD985447       <-- TGTGAGCAGTCATCCACCATCCATTTACACCGCACTGTCAATCAAATTAA
EX899844       <-- TGTGAGCAGTCATCCACCATCCATTTGCACCGCACTGTCAATCAAATCAA
FD944843       <-- TGTGAGCAGTCATCCACCATCCGTTTGCACCGCACTGTCAATCAAATCAA
FD546102       <-- TGTGAGCAGTCATCCACCACCCATTTGCACCGCACTGTCAATCAAATCAA
EX777068       <-- TGTGAGCAGTCATCCACCATCCATTTGCACCGCACTGCCAATCAAATTAA
FD583135       <-- TGTGAGCAGTCATCCACCATCCATTTGCACCGCACTGTCAATCAAATCAA
FY430036       <-- TGTGAGCAGTCATCCACCATCCATTTGCACCGCGCTGTCAATCAAATCAA
EX892235       <-- TGTGAGCAGTCATCCACCATCCATTTGCACCGCACTGTCAATCAAATTAA
EV539655       <-- TGTGAGCAGTCATCCACCATCCATTTGCACCGCACTGTCAATCAAATCAA
FD544925       <-- ............................................AATCAA
EY919944       <-- ..................................................
EY920772       <-- ..................................................
EY911909       <-- ..................................................
EY903362       <-- ..................................................
EX899560       <-- ..................................................
EY905823       --> ..................................................
EY907320       --> ..................................................
FD971860       --> ..................................................
FD544369       --> TGTGAGCAGTCATCCACCATCCATTTGCACCGCACTGTCAATCAAATCAA
HS106967       --> TGTGAGCAGTCATCCACCATCCATTTGCACCGCACTGTCAATCAAATCAA
HS106970       --> TGTGAGCAGTCATCCACCATCCATTTGCACCGCACTGTCAATCAAATCAA
FY452281       --> TGTGAGCAGTCATCCACCATCCATTTGCACCGCACTGTCAATCAAATCAA
FY437001       --> TGTGAGCAGTCATCCACCATCCATTTGCACCGCACTGTCAATCAAATCA.
FD956504       --> TGTGAGCAGTCATCCACCATCCATTTGCACCGCACTGTCAATCAAATCAA
FD958001       --> TGCGAGCAGTCATCCACCATCCATTTGCACCGCACTGTCAATCAAATCAA
FD548782       --> TGTGAGCAGTCATCCACCATCCATTTGCACCGCACTGTCAATCAAATCAA
EW734782       --> TGTGAGCAGTCATCCACCATCCATTTGCACCGCACTGTCAATCAAATCAA
EW735539       --> TGTGAGCAGTCATCCACCATCCATTTGCACCGCACTGTCAATCAAATCAA
EY924259       --> ..................................................
EY925255       --> ..................................................
EX895469       --> ..................................................

               751    -    801
UN16257        --> AAGCTTAGGTGCTAAAGCTGGAGTTGTTCTAAACCCTGGAACCCCATTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540308       <-- AAGCTTAGGTGCTAAAGCTGGAGTTGTTCTAAACCCTGGAACCCCATTGA
EV574351       <-- AAGCTTAGGTGCTAAAGCTGGAGTTGTTCTAAACCCTGGAACCCCATTGA
FY429694       <-- AAGCTTAGGTGCTAAAGCTGGAGTTGTTCTAAACCCTGGAACCCCATTGA
FD952372       <-- AAGCTTAGGTGCTAAAGCTGGAGTTGTTCTAAACCCTGGAACCCCATTGA
FD985447       <-- AAGCTTAGGTGCTAAAGCTGGAGTTGTTCTAAACCCTGGAACCCCATTGA
EX899844       <-- AAGCTTAGGTGCTAAAGCTGGAGTTGTTCTAAACCCTGGAACCCCATTGA
FD944843       <-- AAGCTTAGGTGCTAAAGCTGGAGTTGTTCTAAACCCTGGAACCCCATTGA
FD546102       <-- AAGCTTAGGTGCTAAAGCTGGAGTTGTTCTAAACCCTGGAACCCCATTGA
EX777068       <-- AAGCTTAGGTGCTAAAGCTGGAGTTGTTCTAAACCCTGGAACCCCATTGA
FD583135       <-- AAGCTTAGGTGCTAAAGCTGGAGTTGTTCTAAACCCTGGAACCCCATTGA
FY430036       <-- AAGCTTAGGTGCTAAAGCTGGAGTTGTTCTAAACCCTGGAACCCCATTGA
EX892235       <-- AAGCTTAGGTGCCAAAGCTGGAGTTGTTCTAAACCCTGGAACCCCATTGA
EV539655       <-- AAGCTTAGGTGCTAAAGCTGGAGTTGTTTTAAACCCTGGAACCCCATTGA
FD544925       <-- AAGCTTAGGTGCTAAAGCTGGAGTTGTTCTAAACCCTGGAACCCCATTGA
EY919944       <-- ......................................GAACCCCATTGA
EY920772       <-- ..................................................
EY911909       <-- ..................................................
EY903362       <-- ..................................................
EX899560       <-- ..................................................
EY905823       --> ..................................................
EY907320       --> ..................................................
FD971860       --> ..................................................
FD544369       --> AAGCTTAG-TGCTAAAGCTGGAGTTGTTCTAAACCCTGGAACCCCATTGA
HS106967       --> AAGCTTAGGTGCTAAAGCTGGAGTTGTTCTAAACCCTGGAACCCCATTGA
HS106970       --> AAGCTTAGGTGCTAAAGCTGGAGTTGTTCTAAACCCTGGAACCCCATTGA
FY452281       --> AAGCTTAGGTGCTAAAGCTGGAGTTGTTCTAAACCCTGGAACCCCATTGA
FY437001       --> ..................................................
FD956504       --> AAGCTTAGGTGCTAAAGCTGGAGTTGTTCTAAACCCTGGAACCCCATTGA
FD958001       --> AAGCTTAGGTGCTAAAGCTGGAGTTGTTCTAAGCCCTGGAACCCCATTGA
FD548782       --> AAGCTTAGGTGCTAAAGCTGGAGTTGTTCTAAACCCTGGAACCCCATTGA
EW734782       --> AAGCTTAGGTGCTAAAGCTGGAGTTGTTCTAAACCCTGGAACCCCATTGA
EW735539       --> AAGCTTAGGTGCTAAAGCTGGAGTTGTTCTAAACCCTGGAACCCCATTGA
EY924259       --> ......................................GAACCCCATTGA
EY925255       --> ......................................GAACCCCATTGA
EX895469       --> ..................................................

               801    -    851
UN16257        --> GTGCTATAGAATATGTATTGGAGGTGGTGGATCTGGTCTTGATAATGTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540308       <-- GTGCTATAGAATATGTATTGGAGGTGGTGGATCTGGTCTTGATAATGTCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV574351       <-- GTGCTATAGAATATGTATTGGAGGTGGTGGATCTGGTCTTGATAAT-TCG  Raphanus raphanistrum subsp. landra
FY429694       <-- GTGCTATAGAATATGTATTGGAGGTGGTGGATTTGGTCTTGATAATGTCG  Raphanus sativus cv GSK3-1
FD952372       <-- GTGCTATAGAATATGTATTGGAGGTGGTGGATTTGGTCTTGATAATGTCG  Raphanus sativus cv Rat-Tail Radish #3870
FD985447       <-- GTGCTATAGAATATGTATTGGAGGTGGTGGATCTGGTCTTGATAATGTCG  Raphanus raphanistrum subsp. landra
EX899844       <-- GTGCTATAGAATATGTATTGGAGGTGGTGGATCTGGTCTTGATAATGTCG  Raphanus sativus cv Early Scarlet Globe
FD944843       <-- GTGCTATAGAATATGTATTGGAGGTGGTGGATCTGGTCTTGATAATGTCG  Raphanus sativus cv Early Scarlet Globe
FD546102       <-- GTGCTATAGAATATGTATTGGAGGTGGTGGATCTGGTCTTGATAATGTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777068       <-- GTGCTATAGAATATGTATTGGAGGTGGTGGATCTGGTCTTGATAATGTCG  Raphanus raphanistrum subsp. landra
FD583135       <-- GTGCTATAGAATATGTATTGGAGGTGGTGGATCTGGTCTTGACAATGTCG  Raphanus sativus cv Rat-Tail Radish #3870
FY430036       <-- GTGCTATAGAATATGTATTGGAGGTGGTGGATTTGGTCTTGATAATGTCG  Raphanus sativus cv GSK3-1
EX892235       <-- GTGCTATAGAATATGTATTGGAGGTGGTGGATCTGGTCTTGATAATGTCG  Raphanus sativus var. oleiformis
EV539655       <-- GTGCTATAGAATATGTATTGGAGGTGGTGGATTTGGTCTTGATAATGTCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544925       <-- GTGCTATAGAATATGTATTGGAGGTGGTGGATCTGGTCTTGATAATGTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY919944       <-- GTGCTATAGAATATGTATTGGAGGTGGTGGATCTGGTCTTGATAATGTCG  Raphanus raphanistrum subsp. landra
EY920772       <-- ....................GAGGTGGTGGATCTGGTCTTGATAATGTCG  Raphanus raphanistrum subsp. landra
EY911909       <-- ...............................TCTGGTCTTGATAATGTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY903362       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX899560       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY905823       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907320       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD971860       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544369       --> GTGCTATAGAATATGTATTGGAGGTGGTGGATCTGGTCTTGATAAT....  Raphanus raphanistrum subsp. raphanistrum (MS)
HS106967       --> GTGCTATAGAATATGTATTGGAGGTGGTGGATCTGGTCTTGATAATGTCG  Raphanus sativus var. niger
HS106970       --> GTGCTATAGAATATGTATTGGAGGTGGTGGATCTGGTCTTGATAATGTCG  Raphanus sativus var. niger
FY452281       --> GTGCTATAGAATATGTATTGGAGGTGGTGGATTTGGTCTTGATAATGTCG  Raphanus sativus cv GSK3-1
FY437001       --> ..................................................  Raphanus sativus cv GSK3-1
FD956504       --> GTGCTATAGAATATGTATTGGAGGTGGTGGATTTGGTCTTGATAATGTCG  Raphanus sativus cv Rat-Tail Radish #3870
FD958001       --> GTGCTATAGAATATGTATTGGAGGTGGTGGATTTGGTCTTGATAATGTCG  Raphanus sativus cv Rat-Tail Radish #3870
FD548782       --> GTGCTATAGAATATGTATTGGAGGTGGTGGATCTGGTCTTGATAATGTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734782       --> GTGCTATAGAATATGTATTGGAGGTGGTGGATCTGGTCTTGATAATGTCG  Raphanus sativus cv Rat-Tail Radish #3870
EW735539       --> GTGCTATAGAATATGTATTGGAGGTGGTGGATCTGGTCTTGATAATGTCG  Raphanus sativus cv Rat-Tail Radish #3870
EY924259       --> GTGCTATAGAATATGTATTGGAGGTGGTGGATCTGGTCTTGATAATGTCG  Raphanus raphanistrum subsp. landra
EY925255       --> GTGCTATAGAATATGTATTGGAGGTGGTGGATCTGGTCTTGATAATGTCG  Raphanus raphanistrum subsp. landra
EX895469       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               851    -    901
UN16257        --> GTCAACCCCGGGTTTGGTGGACAGAGCTTTATCGAAAGCCAAGTTAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540308       <-- GTCAACCCCGGTTTTGGTGGACAGAGCTTTATCGAAAGCCAAGTTAAGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV574351       <-- GCCAACCCCGGGTTTGGTGGACAGAGCTTTATCGAAAGCCAAGTTAAGAA  Raphanus raphanistrum subsp. landra
FY429694       <-- GTCAATCCCGGGTTTGGTGGACAGAGCTTTATCGAAAGCCAAGTTAAGAA  Raphanus sativus cv GSK3-1
FD952372       <-- GTCAATCCCGGGTTTGGTGGACAGAGCTTTATCGAAAGCCAAGTTAAGAA  Raphanus sativus cv Rat-Tail Radish #3870
FD985447       <-- GTCAACCCTGGGTTTGGTGGACAGAGCTTTATCGAAAGCCAAGTTAAGAA  Raphanus raphanistrum subsp. landra
EX899844       <-- GTCAACCCCGGGTTTGGTGGACAGAGCTTTATCGAAAGCCAAGTTAAGAA  Raphanus sativus cv Early Scarlet Globe
FD944843       <-- GTCAACCCCGGGTTTGGTGGACAGAGCTTTATCGAAAGCCAAGTTAAGAA  Raphanus sativus cv Early Scarlet Globe
FD546102       <-- GTCAACCCCGGGTTTGGTGGACAGAGCTTTATCGAAAGCCAAGTTAAGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777068       <-- GTCAACCCTGGGTTTGGTGGACAGAGCTTTATCGAAAGCCAAGTTAAGAA  Raphanus raphanistrum subsp. landra
FD583135       <-- GTCAACCCCGGGTTTGGTGGACAGAGCTTTATCGAAAGCCAAGTTAAGAA  Raphanus sativus cv Rat-Tail Radish #3870
FY430036       <-- GTCAATCCCGGGTTTGGTGGACAGAGCTTTATCGAAAGCCAAGTTAAGAA  Raphanus sativus cv GSK3-1
EX892235       <-- GTCAACCCCGGGTTTGGTGGACAGAGCTTTATCGAAAGCCAAGTTAAGAA  Raphanus sativus var. oleiformis
EV539655       <-- GTCAACCCCGGTTTTGGTGGACAGAGCTTTATCGAAAGCCAAGTTAAGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544925       <-- GTCAACCCCGGGTTTGGTGGACAGAGCTTTATCGAAAGCCAAGTTAAGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY919944       <-- GTCAACCCCGGGTTTGGTGGACAGAGCTTTATCGAAAGCCAAGTTAAGAA  Raphanus raphanistrum subsp. landra
EY920772       <-- GTCAACCCCGGGTTTGGTGGACAGAGCTTTATCGAAAGCCAAGTTAAGAA  Raphanus raphanistrum subsp. landra
EY911909       <-- GTCAACCCCGGGTTTGGTGGACAGAGCTTTATCGAAAGCCAAGTTAAGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY903362       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX899560       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY905823       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907320       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD971860       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544369       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
HS106967       --> GTCAACCCCGGGTTTGGTGGACAGAGCTTTATCGAAAGCC..........  Raphanus sativus var. niger
HS106970       --> GTCAACCCCGGGTTTGGTGGACAGAGCTTTATCGAAAGCCAAGTTAAGAA  Raphanus sativus var. niger
FY452281       --> GTCAATCCCGGGTTTGGTGGACAGAGCTTTATCGAAAGCCAAGTTAAGAA  Raphanus sativus cv GSK3-1
FY437001       --> ..................................................  Raphanus sativus cv GSK3-1
FD956504       --> GTCAATCCCGGGTTTGGTGGACAGAGCTTTATCGAAAGCCAAGTTAAGAA  Raphanus sativus cv Rat-Tail Radish #3870
FD958001       --> GTCAATCCCGGGTTTGGTGGACAGAGCTTTATCGAAAGCCAAGTTAAGAA  Raphanus sativus cv Rat-Tail Radish #3870
FD548782       --> GTCAACCCCGGGTTTGGTGGACAGAGCTTTATCGAAAGCCAAGTTAAGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734782       --> GTCAACCCCGGGTTTGGTGGACAGAGCTTTATCGAAAGCCAAGTTAAGAA  Raphanus sativus cv Rat-Tail Radish #3870
EW735539       --> GTCAACCCCGGGTTTGGTGGACAGAGCTTTATCGAAAGCCAAGTTAAGAA  Raphanus sativus cv Rat-Tail Radish #3870
EY924259       --> GTCAACCCCGGGTTTGGTGGACAGAGCTTTATCGAAAGCCAAGTTAAGAA  Raphanus raphanistrum subsp. landra
EY925255       --> GTCAACCCCGGGTTTGGTGGACAGAGCTTTATCGAAAGCCAAGTTAAGAA  Raphanus raphanistrum subsp. landra
EX895469       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               901    -    951
UN16257        --> AATCTCGGATTTGAGAAGAATGTGTGTCGAAAAGGGAGTAAACCCATGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540308       <-- AATCTCGGATTTGAGAAGAATGTGTGTCGAAAAGGGAGTAAACCCATGGA
EV574351       <-- AATCTCGGATTTGAGAAGAATGTGTGTCGAAAAGGGAGTAAACCCATGGA
FY429694       <-- AATCTCGGATTTGAGAAGAATGTGTGTCGAAAAGGGAGTAAACCCATGGA
FD952372       <-- AATTTCGGATTTGAGAAGAATGTGTGCCGAAAAGGGAGTAAACCCATGGA
FD985447       <-- AATCTCGGATTTGAGAAGAATGTGTGTCGAAAAGGGAGTAAACCCATGGA
EX899844       <-- AATCTCGGATTTGAGAAGAATGCGTGTCGAAAAGGGAGTAAACCCATGGA
FD944843       <-- AATCTCGGATTTGAGAAGAATGTGTGTCGAAAAGGGAGTAAACCCATGGA
FD546102       <-- AATCTCGGATTTGAGAAGAATGTGTGTCGAAAAGGGAGTAAACCCATGGA
EX777068       <-- AATCTCGGATTTGAGAAGAATGTGTGTCGGAAAGGGAGTAAACCCATGGA
FD583135       <-- AATCTCGGATTTGAGAAGAATGTGTGTCGAAAAGGGAGTAAACCCATGGA
FY430036       <-- AATCTCGGATTTGAGAAGAATGTGTGTCGAAAAGGGAGTAAACCCATGGA
EX892235       <-- AATCTCGGATTTGAGAAGAATGTGTGTCGAAAAGGGAGTAAACCCATGGA
EV539655       <-- AATTTTGGATTTGAGAAGAATGTGTGTCGAAAAGGGAGTAAACCCATGGA
FD544925       <-- AATTTCGGATTTGAGAAGAATGTGTGTCGAAAAGGGAGTAAACCCATGGA
EY919944       <-- AATCTCGGATTTGAGAAGAATGTGTGTCGAAAAGGGAGTAAACCCATGGA
EY920772       <-- AATCTCGGATTTGAGAAGAATGTGTGTCGAAAAGGGAGTAAACCCATGGA
EY911909       <-- AATTTCGGATTTGAGAAGAATGTGTGTCGAAAAGGGAGTAAACCCATGGA
EY903362       <-- ....TCGGATTTGAGAAGAATGTGTGTCGAAAAGGGAGTAAACCCATGGA
EX899560       <-- ...........................................gCATGGA
EY905823       --> ..................................................
EY907320       --> ..................................................
FD971860       --> ..................................................
FD544369       --> ..................................................
HS106967       --> ..................................................
HS106970       --> AATCTCGGATTTGAGAAGAATGTGTGTC......................
FY452281       --> AATCTCGGATTTGAGAAGAATGTGTGTCGAA...................
FY437001       --> ..................................................
FD956504       --> AATCTCGGATT-GAGAAGAATGTGTGCCGAAAAGGGA.............
FD958001       --> AATCTCGGATTTGAGAAGAATGTGTGTCGAAAAGGGAGTAAACCCATGGA
FD548782       --> AATCTCGGATTTGAGAAGAATGTGTGTCGAAAAGGGAGTAAACCCATGGA
EW734782       --> AATCTCGGATTTGAGAAGAATGTGTGTCGAAAAGGGAGTAAACCCATGGA
EW735539       --> AATCTCGGATTTGAGAAGAATGTGTGTCGAAAAGGGAGTAAACCCATGGA
EY924259       --> AATCTCGGATTTGAGAAGAATGTGTGTCGAAAAGGGAGTAAACCCATGGA
EY925255       --> AATCTCGGATTTGAGAAGAATGTGTGTCGAAAAGGGAGTAAACCCATGGA
EX895469       --> ...........................................gCATGGA

               951    -   1001
UN16257        --> TTGAAGTTGATGGTGGTGTCACTCCAAAGAATGCATACAAGGTTATTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540308       <-- TTGAAGTTGATGGTGGTGTCACTCCAAAGAATGCATACAAGGTTATTGAG
EV574351       <-- TTGAAGTTGATGGTGGTGTCACTCCAAAGAATGCATACAAGGTTATTGAG
FY429694       <-- TTGAAGTTGATGGTGGTGTCACTCCAAAGAATGCATACAAGGTTATTGAG
FD952372       <-- TTGAAGTTGATGGTGGTGTCACTCCAAAGAATGCATACAAGGTTATTGAG
FD985447       <-- TTGAAGTTGATGGTGGTGTCACTCCAAAGAATGCATACAAGGTTATTGAG
EX899844       <-- TTGAAGTTGATGGTGGTGTCACTCCAAAGAATGCATACAAGGTTATTGAG
FD944843       <-- TTGAAGTTGATGGTGGTGTCACTCCAAAGAATGCATACAAGGTTATTGAG
FD546102       <-- TTGAAGTTGATGGTGGTGTCACTCCAAAGAATGCATACAAGGTTATTGAG
EX777068       <-- TTGAAGTTGATGGTGGTGTCACTCCAAAGAATGCATACAAGGTTATTGAG
FD583135       <-- TTGAAGTTGATGGTGGTGTCACTCCAAAGAATGCATACAAGGTTATTGAG
FY430036       <-- TTGAAGTTGATGGTGGTGTCACTCCAAAGAATGCATACAAGGTTATTGAG
EX892235       <-- TTGAAGTTGATGGTGGTGTCACTCCAAAGAATGCATACAAGGTTATTGAG
EV539655       <-- TTGAAGTTGATGGTGGTGTCACTCCAAAGAATGCATACAAGGTTATTGAG
FD544925       <-- TTGAAGTTGATGGTGGTGTCACTCCAAAGAATGCATACAAGGTTATTGAG
EY919944       <-- TTGAAGTTGATGGTGGTGTCACTCCAAAGAATGCATACAAGGTTATTGAG
EY920772       <-- TTGAAGTTGATGGTGGTGTCACTCCAAAGAATGCATACAAGGTTATTGAG
EY911909       <-- TTGAAGTTGATGGTGGTGTCACTCCAAAGAATGCATACAAGGTTATTGAG
EY903362       <-- TTGAAGTTGATGGTGGTGTCACTCCAAAGAATGCATACAAGGTTATTGAG
EX899560       <-- TTGAAGTTGATGGTGGTATCACTCCAAAGAATGCATACAAGGTTATTGAG
EY905823       --> ..................................................
EY907320       --> ..................................................
FD971860       --> ..................................................
FD544369       --> ..................................................
HS106967       --> ..................................................
HS106970       --> ..................................................
FY452281       --> ..................................................
FY437001       --> ..................................................
FD956504       --> ..................................................
FD958001       --> TTGAAGTTGATGGTGGTGTCACTCCAAAGAATGCATACAAG-TTATTGAG
FD548782       --> TTGAAGTTGATGGTGGTGTCACTCCAAAGAATGCATACAAGGTTATTGAG
EW734782       --> TTGAAGTTGATGGTGGTGTCACTCCAAAGAATGCATACAAGGTTATTTAG
EW735539       --> TTGAAGTTGATGGTGGTGTCACTCCAAAGAATGCATACAAGGTTGTTGAG
EY924259       --> TTGAAGTTGATGGTGGTGTCACTCCAAAGAATGCATACAAGGTTATTGAG
EY925255       --> TTGAAGTTGATGGTGGTGTCACTCCAAAGAATGCATACAAGGTTATTGAG
EX895469       --> TTGAAGTTGATGGTGGTATCACTCCAAAGAATGCATACAAGGTTATTGAG

               1001   -   1051
UN16257        --> GCTGGAGCAAATGCTCTAGTAGCTGGATCAGCTGTATTTGGAGCTAAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540308       <-- GCTGGAGCAAATGCTCTAGTAGCTGGATCAGCTGTGTTTGGAGCTAAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV574351       <-- GCTGGAGCAAATGCTCTAGTAGCTGGATCAGCTGTATTTGGAGCTAAAGA  Raphanus raphanistrum subsp. landra
FY429694       <-- GCTGGAGCAAATGCTCTAGTAGCCGGATCAGCTGTATTTGGAGCTAAAGA  Raphanus sativus cv GSK3-1
FD952372       <-- GCTGGAGCAAATGCTCTAGTAGCCGGATCAGCTGTATTTGGAGCTAAAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD985447       <-- GCTGGAGCAAATGCTCTAGTAGCTGGATCAGCTGTATTTGGAGCTAAAGA  Raphanus raphanistrum subsp. landra
EX899844       <-- GCTGGAGCAAATGCTCTAGTAGCTGGATCAGCTGTATTTGGAGCTAAAGA  Raphanus sativus cv Early Scarlet Globe
FD944843       <-- GCTGGAGCAAATGCTCTAGTAGCTGGATCAGCTGTATTTGGAGCTAAAGA  Raphanus sativus cv Early Scarlet Globe
FD546102       <-- GCTGGAGCAAATGCTCTAGTAGCTGGATCAGCTGTATTTGGTGCTAAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777068       <-- GCTGGAGCAAATGCTCTAGTAGCTGGATCAGCTGTATTTGGAGCTAAAGA  Raphanus raphanistrum subsp. landra
FD583135       <-- GCTGGAGCAAATGCTCTAGTAGCTGGATCAGCTGTATTTGGAGCTAAAGA  Raphanus sativus cv Rat-Tail Radish #3870
FY430036       <-- GCTGGAGCAAATGCTCTAGTAGCCGGATCAGCTGTATTTGGAGCTAAAGA  Raphanus sativus cv GSK3-1
EX892235       <-- -CTGGAGCAAATGCTCTAGTAGCTGGATCAGCTGTATTTGGAGCTAAAGA  Raphanus sativus var. oleiformis
EV539655       <-- GCTGGAGCAAATGCTTTAGTAGCTGGATCAGCTGTATTTGGAGCTAAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544925       <-- GCTGGAGCAAATGCTCTAGTAGCTGGATCAGCTGTATTTGGTGCTAAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY919944       <-- GCTGGAGCAAATGCTCTAGTAGCTGGATCAGCTGTATTTGGAGCTAAAGA  Raphanus raphanistrum subsp. landra
EY920772       <-- GCTGGAGCAAATGCTCTAGTAGCTGGATCAGCTGTATTTGGAGCTAAAGA  Raphanus raphanistrum subsp. landra
EY911909       <-- GCTGGAGCAAATGCTTTAGTAGCTGGATCAGCTGTATTTGGTGCTAAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY903362       <-- GCTGGAGCAAATGCTCTAGTAGCTGGATCAGCTGTGTTTGGAGCTAAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX899560       <-- GCTGGAGCAAATGCTCTAGTAGCTGGATCAGCTGTATTTGGAGCTAAAGA  Raphanus sativus cv Early Scarlet Globe
EY905823       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907320       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD971860       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544369       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
HS106967       --> ..................................................  Raphanus sativus var. niger
HS106970       --> ..................................................  Raphanus sativus var. niger
FY452281       --> ..................................................  Raphanus sativus cv GSK3-1
FY437001       --> ..................................................  Raphanus sativus cv GSK3-1
FD956504       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD958001       --> -CTGGAGCAAATGCTCTAGTAGCCGGATCAGCTGTATTTGGAGCTAAAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD548782       --> GCTGGAGCAAATGCTCTAGTAGCTGGATCAGCTGTATTTGGTGCTAAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734782       --> GCTGGAGCAAATGCTCTAGTAGCTGGATCAGCTGTATTTGGTGCTAAAGA  Raphanus sativus cv Rat-Tail Radish #3870
EW735539       --> GCTGGAGCAAATGCTCTAGTAGCTGGATCAGCTGTATTTGGTGCTAAAGA  Raphanus sativus cv Rat-Tail Radish #3870
EY924259       --> GCTGGAGCAAATGCTCTAGTAGCTGGATCAGCTGTATTTGGAGCTAAAGA  Raphanus raphanistrum subsp. landra
EY925255       --> GCTGGAGCAAATGCTCTAGTAGCTGGATCAGCTGTATTTGGAGCTAAAGA  Raphanus raphanistrum subsp. landra
EX895469       --> GCTGGAGCAAATGCTCTAGTAGCTGGATCAGCTGTATTTGGAGCTAAAGA  Raphanus sativus cv Early Scarlet Globe

               1051   -   1101
UN16257        --> CTATGAAGAAGCTATAAAAGGAATCAAGACCAGCAAGAAGCCAGAAGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540308       <-- CTATGAAGAAGCTATAAAAGGAATCAAGACCAGCAAGAAGCCAGAAGCTG
EV574351       <-- CTATGAAGAAGCTATAAAAGGAATCAAGACCAGCAAGAAGCCAGAAGCTG
FY429694       <-- CTATGAAGAAGCTATTAAAGGAATCAAGACCAGCAAGAAGCCAGAAGCTG
FD952372       <-- CTATGAAGAAGCTATTAAAGGAATCAAGACCAGCAAGAAGCCAGAAGCTG
FD985447       <-- CTATGAAGAAGCTATAAAAGGAATCAAGACCAGCAAGAAGCCAGAAGCTG
EX899844       <-- CTATGAAGAAGCTATAAAAGGAATCAAGACCAGCAAGAAGCCAGAAGCTG
FD944843       <-- CTATGAAGAAGCTATAAAAGGAATCAAGACCAGCAAGAAGCCAGAAGCTG
FD546102       <-- CTATGAAGAAGCTATAAAAGGAATCAAGACCAGCAAGAAGCCAGAAGCTG
EX777068       <-- CTATGAAGAAGCTATAAAAGGAATCAAGACCAGCAAGAAGCCAGAAGCTG
FD583135       <-- CTATGAAGAAGCTATAAAAGGAATCAAGACCAGCAAGAAGCCAGAAGCTG
FY430036       <-- CTATGAAGAAGCTATTAAAGGAATCAAGACCAGCAAGAAGCCAGAAGCTG
EX892235       <-- CTATGAAGAAGCTATAAAAGGAATCAAGACCAGCAAGAAGCCAGAAGCTG
EV539655       <-- CTATGAAGAAGCTATAAAAGGAATCAAGACCAGCAAGAAGCCAGAAGCTG
FD544925       <-- CTATGAAGAAGCTATAAAAGGAATCGAGACCAGCAAGAAGCCAGAAGCTG
EY919944       <-- CTATGAAGAAGCTATAAAAGGAATCAAGACCAGCAAGAAGCCAGAAGCTG
EY920772       <-- CTATGAAGAAGCTATAAAAGGAATCAAGACCAGCAAGAAGCCAGAAGCTG
EY911909       <-- CTATGAAGAAGCTATAAAAGGAATCAAGACCAGCAAGAAGCCAGAAGCTG
EY903362       <-- CTATGAAGAAGCTATAAAAGGAATCAAGACCAGCAAGAAGCCAGAAGCTG
EX899560       <-- CTAAGAAGAAGCTATAAAAGGAATCAAGACCAGCAAGAAGCCAGAAGCTG
EY905823       --> ..................................................
EY907320       --> ..................................................
FD971860       --> ..................................................
FD544369       --> ..................................................
HS106967       --> ..................................................
HS106970       --> ..................................................
FY452281       --> ..................................................
FY437001       --> ..................................................
FD956504       --> ..................................................
FD958001       --> CTATGAga..........................................
FD548782       --> CTATGAAGAAGCTATAAAAGGAATCGAGACCAGCAAGAAGCCAGAAGCTG
EW734782       --> CTATGAAGAAGCTATAAAAGGAATCGAGACCAGCGAGAAGCCAGAAGCTG
EW735539       --> CTATGAAGAAGCTATAAAAGGAATCAAGACCAGCAAGAAGCCAGAAGCTG
EY924259       --> CTATGAAGAAGCTATAAAAGGAATCAAGACCAGCAAGAAGCCAGAAGCTG
EY925255       --> CTATGAAGAAGCTATAAAAGGAATCAAGACCAGCAAGAAGCCAGAAGCTG
EX895469       --> CTAAGAAGAAGCTATAAAAGGAATCAAGACCAGCAAGAAGCCAGAAGCTG

               1101   -   1151
UN16257        --> TGGCTGTGTAATGTGAAGCAACAAGCTAAAAAGATCATAAGACAGATCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540308       <-- TGGCTGTGTAATGTGAAGCAACAAGCTAAAAAGATCATAAGACAGATCAC
EV574351       <-- TGTCTGTGTAATGTGAAGCAACAAGCTAAAAAGATCATAAGACAGATCAC
FY429694       <-- TGGCTGTGTAATGTGAAGCAACAAGCTAAAAATATCATAAGACAGATCAC
FD952372       <-- TGGCTGTGTAATGTGAAGCAACAAGCTAAAAATATCATAAGACAGATCAC
FD985447       <-- TGGCTGTGTAATGTGAAGCAACAAGCTAAAAAGATCATAAGGCAGATCAC
EX899844       <-- TGGCTGTGTAATGTGAAGCAACAAGCTAAAAAGATCATAAGACAGATCAC
FD944843       <-- TGGCTGTGTAGTGTGAAGCAACAAGCTAAAAAGATCATAAGACAGATCAC
FD546102       <-- TGGCTGTGTAATGTGAAGCAACAAGCTAAAAAGATCATAAGACAGATCAC
EX777068       <-- TGGTTGTGTAATGTGAAGCAACAAGCTAAAAAGATCATAAGGCAGACCAC
FD583135       <-- TGGCTGTGTAATGTGAAGCAACAAGCTAAAAAGATCATAAGACAGATCAC
FY430036       <-- TGGCTGTGTAATGTGAAGCAACAAGCTAAAAATATCATAAGACAGATCAC
EX892235       <-- TGGCTGTGTAATGTGAAGTAACAAGCTAAAAAGATCATAATACAGATCAC
EV539655       <-- TGGCTGTGTAATGTGAAGCAACAAGCTAAAAAGATCATAAGACAGATCAC
FD544925       <-- TGGCTGTGTAATGTGAAGCAACAAGCTAAAAAGATCATAAGACAGATCAC
EY919944       <-- TGGCTGTGTAATGTGAAGCAACAAGCTAAAAAGATCATAAGACAGATCAC
EY920772       <-- TGGCTGTGTAATGTGAAGCAACAAGCTAAAAAGATCATAAGACAGATCAC
EY911909       <-- TGGCTGTGTAATGTGAAGCAACAAGCTAAAAAGATCATAAGACAGATCAC
EY903362       <-- TGGCTGTGTAATGTGAAGCAACAAGCTAAAAAGATCATAAGACAGATCAC
EX899560       <-- TGGCTGTGTAATGTGAAGCAACAAGCTAAAAAGATCATAAGACAGATCAC
EY905823       --> ..................................................
EY907320       --> ..................................................
FD971860       --> ..................................................
FD544369       --> ..................................................
HS106967       --> ..................................................
HS106970       --> ..................................................
FY452281       --> ..................................................
FY437001       --> ..................................................
FD956504       --> ..................................................
FD958001       --> ..................................................
FD548782       --> TGGCTGTGTAATGTGAAGCAACAAGCTAAAAAGATCATAAGACAGATCAC
EW734782       --> TGGCTGTGTAATGTGAAGCAACAAGCTAAAAAGATCATAAGACAGATCAC
EW735539       --> TGGCTGTGTAATGTGAAGCAACAAGCTAAAAAGATCATAAGACAGATCAC
EY924259       --> TGGCTGTGTAATGTGAAGCAACAAGCTAAAAAGATCATAAGACAGATCAC
EY925255       --> TGGCTGTGTAATGTGAAGCAACAAGCTAAAAAGATCATAAGACAGATCAC
EX895469       --> TGGCTGTGTAATGTGAAGCAACAAGCTAAAAAGATCATAAGACAGATCAC

               1151   -   1201
UN16257        --> CGAGATGTTTATGTTGTTGTTGTTGTCATTCACCAGATTCCATTCGACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540308       <-- CGAGATGTTTATGTTGTTGTTGTTGTCATTCACCAGATTCCATTCGACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV574351       <-- CGAGATGTTTATGTTGTTGTTGTTGTCATTCACCAGATTGCATTCGACAT  Raphanus raphanistrum subsp. landra
FY429694       <-- CGAGATGTTTATGTTGTTGTTGTTGTCATTCACCAGATTGCATTCGACAT  Raphanus sativus cv GSK3-1
FD952372       <-- CGAGATGTTTATGTTGTTGTTGTTGTCATTCACCAGATTGCATTCGACAT  Raphanus sativus cv Rat-Tail Radish #3870
FD985447       <-- CGAGATGTTTATGTTGTTGTTGTTGTCATTCACCAGATTGCATTCGACAT  Raphanus raphanistrum subsp. landra
EX899844       <-- CGAGATGTTTATGTTGTTGTTGTTGTCATTCACCAGATTCCATTCGACAT  Raphanus sativus cv Early Scarlet Globe
FD944843       <-- CGAGATGTTTATGTTGTTGTTGTTGTCATTCACCAGATTCCATTCGACAT  Raphanus sativus cv Early Scarlet Globe
FD546102       <-- CGAGATGTTTATGTTGTTGTTGTTGTCATTCACCAGATTCCATTCGACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777068       <-- CGAGATGTTTATGTTGTTGTTGTTGTCATTCACCAGATTGCATTCGACAT  Raphanus raphanistrum subsp. landra
FD583135       <-- CGAGATGTTTATGTTGTTGTTGTTGTCATTCACCAGATTCCATTCGACAT  Raphanus sativus cv Rat-Tail Radish #3870
FY430036       <-- CGAGATGTTTATGTTGTTGTTGTTGTCATTCACCAGATTGCATTCGACAT  Raphanus sativus cv GSK3-1
EX892235       <-- CGAGATGTTTATGTTGTTGTTGTTGTCATTCACCAGATTGCATTCGACAT  Raphanus sativus var. oleiformis
EV539655       <-- CGAGATGTTTATGTTGTTGTTGTTGTCATTCACCAGATTCCATTCGACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544925       <-- CGAGATGTTTATGTTGTTGTTGTTGTCATTCACCAGATTCCATTCGACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY919944       <-- CGAGATGTTTATGTTGTTGTTGTTGTCATTCACCAGATTGCATTCGACAT  Raphanus raphanistrum subsp. landra
EY920772       <-- CGAGATGTTTATGTTGTTGTTGTTGTCATTCACCAGATTGCATTCGACAT  Raphanus raphanistrum subsp. landra
EY911909       <-- CGAGATGTTTATGTTGTTGTTGTTGTCATTCACCAGATTCCATTCGACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY903362       <-- CGAGATGCTTATGTTGTTGTTGTTGTCATTCACCAGATTCCATTCGACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX899560       <-- CGAGATGTTTATGTTGTTGTTGTTGTCATTCACCAGATTCCATTCGACAT  Raphanus sativus cv Early Scarlet Globe
EY905823       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907320       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD971860       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544369       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
HS106967       --> ..................................................  Raphanus sativus var. niger
HS106970       --> ..................................................  Raphanus sativus var. niger
FY452281       --> ..................................................  Raphanus sativus cv GSK3-1
FY437001       --> ..................................................  Raphanus sativus cv GSK3-1
FD956504       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD958001       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD548782       --> CGAGATGTTTATGTTGTTGTTGTTGTCATT....................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734782       --> CGAGATGTTTATGTTGTTGTTGTTGTCATTCACCAGATTCCATTCGACAT  Raphanus sativus cv Rat-Tail Radish #3870
EW735539       --> CGAGATGTTTATGTTGTTGTTGTTGTCATTCACCAGATTCCATTCGACAT  Raphanus sativus cv Rat-Tail Radish #3870
EY924259       --> CGAGATGTTTATGTTGTTGTTGTTGTCATTCACCAGATTGCATTCGACAT  Raphanus raphanistrum subsp. landra
EY925255       --> CGAGATGTTTATGTTGTTGTTGTTGTCATTCACCAGATTGCATTCGACAT  Raphanus raphanistrum subsp. landra
EX895469       --> CGAGATGTTTATGTTGTTGTTGTTGTCATTCACCAGATTCCATTCGACAT  Raphanus sativus cv Early Scarlet Globe

               1201   -   1251
UN16257        --> AAAAAA-TCCATAAGAATCAAACTCTCAATAGTTTTGAAGTAGCTCGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540308       <-- AAAAAAATCCATAAGAATCAAACTCTCGATGGTTTTGAAGTAGCTCGTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV574351       <-- AAAAAAGTCCATAAGAATCAAACTCTCAATAGTTTTGAAGTAGCTCGTTT  Raphanus raphanistrum subsp. landra
FY429694       <-- AAAAA--TCCATAAGAATCAAACTCTCAATAGTTTTGAAGTAGCTCGTTT  Raphanus sativus cv GSK3-1
FD952372       <-- AAAAA--TCCATAAGAATCAAACTCTCAATAGTTTTGAAGTAGCTCGTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD985447       <-- AAAAAA-TCCATAAGAATCAAACTCTCAATAGTTTTGAAGTAGCTCGTTT  Raphanus raphanistrum subsp. landra
EX899844       <-- AAAAAA-TCCATAAGAATCAAACTCTCGATAGTTTTGAAGTAGCTCGTTT  Raphanus sativus cv Early Scarlet Globe
FD944843       <-- AAAAAA-TCCATAAGAATCAAACTCTCGATAGTTTTGAAGTAGCTCGTTT  Raphanus sativus cv Early Scarlet Globe
FD546102       <-- AAAAAAATCCATAAGAATCAAACTCTCAATAGTTTTGAAGTAGCTCGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777068       <-- AAAAAA-TCCATAAGAATCAAACTCTCAATAGTTTTGAAGTAGCTCGTTT  Raphanus raphanistrum subsp. landra
FD583135       <-- AAAAAA-TCCATAAGAATCAAACTCTCGATAGTTTTGAAGTAGCTCGTTT  Raphanus sativus cv Rat-Tail Radish #3870
FY430036       <-- AAAAA--TCCATAAGAATCAAACTCTCAATAGTTTTGAAGTAGCTCGTTT  Raphanus sativus cv GSK3-1
EX892235       <-- AAAAAAGTCCATAAGAATCAAACTCTCAATAGTTTTGAAGTAGCTCGTTT  Raphanus sativus var. oleiformis
EV539655       <-- AAAAAAATCCATAAGAATCAAACTCTCGATGGTTTTGAAGTAGCTCGTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544925       <-- AAAAAAATCCATAAGAATCAAACTCTCAATAGTTTTGAAGTAGCTCGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY919944       <-- AAAAAAGTCCATAAGAATCAAACTCTCAATAGTTTTGAAGTAGCTCGTTT  Raphanus raphanistrum subsp. landra
EY920772       <-- AAAAAAGTCCATAAGAATCAAACTCTCAATAGTTTTGAAGTAGCTCGTTT  Raphanus raphanistrum subsp. landra
EY911909       <-- AAAAAAATCCATAAGAATCAAACTCTCAATAGTTTTGAATTAGCTCGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY903362       <-- AAAAAAATCCATAAGAATCAAACTCTCGATGGTTTTGAAGTAGCTCGTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX899560       <-- AAAAAA-TCCATAAGAATCAAACTCTCGATAGTTTTGAAGTAGCTCGTTT  Raphanus sativus cv Early Scarlet Globe
EY905823       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907320       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD971860       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544369       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
HS106967       --> ..................................................  Raphanus sativus var. niger
HS106970       --> ..................................................  Raphanus sativus var. niger
FY452281       --> ..................................................  Raphanus sativus cv GSK3-1
FY437001       --> ..................................................  Raphanus sativus cv GSK3-1
FD956504       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD958001       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD548782       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734782       --> AAAAAA-TCCATAAGA-TCAAACTCTCA-TAGTTT-GAAGTAGCTCGTTT  Raphanus sativus cv Rat-Tail Radish #3870
EW735539       --> AAAAAAATCCATAAGAATCAAACTCTCAATAGTTTTGAAGTAGCTCGTTT  Raphanus sativus cv Rat-Tail Radish #3870
EY924259       --> AAAAAAGTCCATAAGAATCAAACTCTCAATAGTTTTGAAGTAGCTCGTTT  Raphanus raphanistrum subsp. landra
EY925255       --> AAAAAAGTCCATAAGAATCAAACTCTCAATAGTTTTGAAGTAGCTCGTTT  Raphanus raphanistrum subsp. landra
EX895469       --> AAAAAA-TCCATAAGAATCAAACTCTCGATAGTTTTGAAGTAGCTCGTTT  Raphanus sativus cv Early Scarlet Globe

               1251   -   1301
UN16257        --> ATACTCCTCCTGTGT-ATCATT-GTCTTGTAGATTTGGGGATATGCAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540308       <-- ATACTCCTCCTGTGT-ATCATT-GTCTTGTAGATTTGGGGATATGCAGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV574351       <-- ATACTCCT-GTGTATCATCATT-GTCTTGTAGATTTGGGGATATGCAGAT  Raphanus raphanistrum subsp. landra
FY429694       <-- ATACTCCGGGTGTATCATCATT-GTCTTGTAGATTTGGGGATATGCAGAT  Raphanus sativus cv GSK3-1
FD952372       <-- ATACTCC-GGTGTATCATCATT-GTCTTGTAGATTTGGGGATATGCAGAT  Raphanus sativus cv Rat-Tail Radish #3870
FD985447       <-- ATACTCCT-GTGTATCATCATT-GTCTTGTAGATTTGGGGATATGCAGAT  Raphanus raphanistrum subsp. landra
EX899844       <-- ATACTCCTCCTGTGT-ATCATTTGTCTTGTAGATTTGGGGATATGCAGAT  Raphanus sativus cv Early Scarlet Globe
FD944843       <-- ATACTCCTCCTGTGT-ATCATTTGTCTTGTAGATTTGGGGATATGCAGAT  Raphanus sativus cv Early Scarlet Globe
FD546102       <-- ATACTCCTCCTGTGT-ATCATTTGTCTTGTAGATTTGGGGATATGCAGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777068       <-- ATACTCCT-GTGTATCATCATT-GTCTTGTAGATTTGGGGATATGCAGAT  Raphanus raphanistrum subsp. landra
FD583135       <-- ATACTCCTCCTGTGT-ATCATTTGTCTTGTAGATTTGGGGATATGCAGAT  Raphanus sativus cv Rat-Tail Radish #3870
FY430036       <-- ATACTCC-GGTGTATCATCATT-GTCTTGTAGATTTGGGGATATGCAGAT  Raphanus sativus cv GSK3-1
EX892235       <-- ATACTCCT-GTGTATCATCATT-GTCTTGTAGATTTGGGGATATGCAGAT  Raphanus sativus var. oleiformis
EV539655       <-- ATACTCCTCCTGTGT-ATCATT-GTCTTGTAGATTTGGGGATATGCAGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544925       <-- ATACTCCTCCTGTGT-ATCATTTGTCTTGTAGATTTGGGGATATGCAGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY919944       <-- ATACTCCT-GTGTATCATCATT-GTCTTGTAGATTTGGGGATATGCAGAT  Raphanus raphanistrum subsp. landra
EY920772       <-- ATACTCCT-GTGTATCATCATT-GTCTTGTAGATTTGGGGATATGCAGAT  Raphanus raphanistrum subsp. landra
EY911909       <-- ATACTCCTCCTGTGT-ATCATTTGTCTTGTAGATTTGGGGATATGCAGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY903362       <-- ATACTCCTCCTGTGT-ATCATT-GTCTTGTAGATTTGGGGATATGCAGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX899560       <-- ATACTCCTCCTGTGT-ATCATTTGTCTTGTAGATTTGGGGATATGCAGAT  Raphanus sativus cv Early Scarlet Globe
EY905823       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907320       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD971860       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544369       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
HS106967       --> ..................................................  Raphanus sativus var. niger
HS106970       --> ..................................................  Raphanus sativus var. niger
FY452281       --> ..................................................  Raphanus sativus cv GSK3-1
FY437001       --> ..................................................  Raphanus sativus cv GSK3-1
FD956504       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD958001       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD548782       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734782       --> ATACTCCTCCTGTGT-ATCATTTGTCTTGTAGATTTGGG-ATATGCAGAT  Raphanus sativus cv Rat-Tail Radish #3870
EW735539       --> ATACTCCTCCTGTGT-ATCATTTGTCTTGTAGATT-GGGGATATGCAGAT  Raphanus sativus cv Rat-Tail Radish #3870
EY924259       --> ATACTCCT-GTGTATCATCATT-GTCTTGTAGATTTGGGGATATGCAGAT  Raphanus raphanistrum subsp. landra
EY925255       --> ATACTCCT-GTGTATCATCATT-GTCTTGTAGATTTGGGGATATGCAGAT  Raphanus raphanistrum subsp. landra
EX895469       --> ATACTCCTCCTGTGT-ATCATTTGTCTTGTAGATTTGGGGATATGCAGAT  Raphanus sativus cv Early Scarlet Globe

               1301   -   1351
UN16257        --> TC-AATACATTATGCAATTAATAAGAAATAAGCTGTGTTACATATGC...
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540308       <-- TC-AATACATTATGCAATTAATAAGAAATAAGCTGTGTTACAT.......
EV574351       <-- TC-AATACATTATGCAATTAATAtg.........................
FY429694       <-- TCCAATACATTAT.....................................
FD952372       <-- TC-AATACATTATGCGATTAATAAGAAATAAGCTGTGTTACATATGC...
FD985447       <-- TC-AATACATTATGCAATTAATAAGAAATAAGCTGTGTTACATATGt...
EX899844       <-- TC-AATACATTATGCAATTAATAAGAAATAAGCTGTGTTACATATGt...
FD944843       <-- TC-AATACATTATGCAATTAATAAGAAATAAGCTGTGTTACATATGtg..
FD546102       <-- TC-AATACATTATGCAATCAATAAGAAATACGCTGTGTTACATATGt...
EX777068       <-- TC-AATACATTATGCAATTAATAAGAAATAAGCTGTGTTACATATGtact
FD583135       <-- TC-AATACATTATGCAATTAATAAGAAATAAGCTGTGTTACATAcg....
FY430036       <-- TC-AATACATTATGCAATTAATAAGAAATAAGCTGTGTTACctttgt...
EX892235       <-- TC-AATACATTATGCAATTAATAAGAAATAAGCTGTGTTACg........
EV539655       <-- TC-AA.............................................
FD544925       <-- TC-AATACATTATGCAATTAATAAGAAATAAGCTGTGTTACATATGg...
EY919944       <-- TC-AATACATTATGCAATTAATAAGAAATAAGCTGTGTTACATATGC...
EY920772       <-- TC-A..............................................
EY911909       <-- TC-AATACATTATGCAATT...............................
EY903362       <-- TC-AATACATTATGCAATTAATAAGAAATAAGCTGTGCTACATATGt...
EX899560       <-- TC-AATACATTATGCAATT...............................
EY905823       --> ..................................................
EY907320       --> ..................................................
FD971860       --> ..................................................
FD544369       --> ..................................................
HS106967       --> ..................................................
HS106970       --> ..................................................
FY452281       --> ..................................................
FY437001       --> ..................................................
FD956504       --> ..................................................
FD958001       --> ..................................................
FD548782       --> ..................................................
EW734782       --> -C--ATACATTA......................................
EW735539       --> TC-A-TACATTATGCA..................................
EY924259       --> TC-AATACATTATGCAATTAATAAGAAATAAGCTGTGTTACATATGC...
EY925255       --> TC-AATACATTATGCAATTAATAAGAAATAAGCTGTGTTACATATGC...
EX895469       --> TC-AATACATTATGCAATT...............................