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Alignment for radish unigene UN16258

               1      -     51
UN16258        --> GGGAGTCCCCACTGAAACACAACAAGAATCAATCTTTTAGGGTTTTCGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544866       <-- ..................................................
EV545195       <-- ..................................................
EX907988       <-- ..................................................
FD985092       <-- ..................................................
EX899435       <-- ..................................................
EY928707       <-- ..................................................
FD566986       <-- ..................................................
FD553076       <-- ..................................................
EY944164       <-- ..................................................
FD934393       <-- ..................................................
FD580942       <-- ..................................................
FD549915       --> GGGAGTCCCCACTGAAACACAACAAGAATCAATCTTTTAGGGTTTTCGTC
EX895273       --> .GGAGTCCCCACTGAAACACAACAAGAATCAATCTTTTAGGGTTTTCGTC
FD576448       --> ....ggaCCCACTGAAACCCACAAAGAATCAATCTTTTAGGGTTTTCGTC
EV549799       --> ..................................................
FD556844       --> ..................................................
FD563321       --> ..................................................
FD937866       --> ..................................................
EY933159       --> ..................................................
EY948458       --> ..................................................
FD989291       --> ..................................................
EV549381       --> ..................................................

               51     -    101
UN16258        --> TCCTAGCGGTGACCGACCTCAAAGAGAAGACGAGAGATCCTCCTCCTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544866       <-- ..................................................
EV545195       <-- ..................................................
EX907988       <-- ..................................................
FD985092       <-- ..................................................
EX899435       <-- ..................................................
EY928707       <-- ..................................................
FD566986       <-- ..................................................
FD553076       <-- ..................................................
EY944164       <-- ..................................................
FD934393       <-- ..................................................
FD580942       <-- ..................................................
FD549915       --> TCCTAGCGGTGACCGACCTCAAAGAGAAGACGAGAGATCCTCCTCCTCCT
EX895273       --> TCCTAGCGGTGACCGACCTCAAAGAGAAGACGAGAGATCCTCCTCCTCCT
FD576448       --> TCCTAGCGGTGACCGACCTCAAAGAGAAGACGAGAGATCCTCCTCCTCCT
EV549799       --> ..ggAGCGGTGACCGACCTCAAAGAGAAGACGAGAGATCCTCCTCCTCCT
FD556844       --> gggagcCGGTGACCGACCTCAACGAGAAGACGAGAGATCCTCCTCCTCCT
FD563321       --> .........gGACCGACCTCAAAGAGAAGACGAGAGATCCTCCTCCTCCT
FD937866       --> ...............ggCTCAAAGAGAAGACGAGAGATCCTCCTCCTCCT
EY933159       --> ..................ggAAAGAGAAGACGAGAGATCCTCCTCCTCCT
EY948458       --> .................ggaAAAGAGAAGACGAGAGATCCTCCTCCTCCT
FD989291       --> ...................gAAAGAGAAGACGAGAGATCCTCCTCCTCCT
EV549381       --> .......................ggGAAGACGAGAGATCCTCCTCCTC--

               101    -    151
UN16258        --> CTTTCGAATCGATTCGTTATTCTCTGCGTTCAGGAATCGAACTCCAGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544866       <-- .TTTCGAATCGATTCGTTATTCTCTGCGTTCAGGAATCGAACTCCATTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV545195       <-- ......AATCGATTCGTTATTCTCTGCGTTCAGGAATCGAACTCCATTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX907988       <-- .........................tattctctgcgttcAACTCCAGTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD985092       <-- ..............................................tTTT  Raphanus raphanistrum subsp. landra
EX899435       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY928707       <-- ..................................................  Raphanus sativus var. oleiformis
FD566986       <-- ..................................................  Raphanus sativus var. oleiformis
FD553076       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY944164       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD934393       <-- ..................................................  Raphanus sativus var. oleiformis
FD580942       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD549915       --> CTTTCGAATCGATTCGTTATTCTCTGCGTTCGGGAATCGAACTCCATTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX895273       --> CTTTCGAATCGATTCGTTATTCTCTGCGTTCAGGAATCGAACTCCAGTTT  Raphanus sativus cv Early Scarlet Globe
FD576448       --> CTTTCGAATCGATTCGTTATTCTCTGCGTTCA--------ACTCCAGTTT  Raphanus sativus cv Rat-Tail Radish #3870
EV549799       --> CTTTCGAATCGATTCGTTATTCTCTGCGTTCAGGAATCGAACTCCATTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556844       --> CTTTCGAACCGATTCGTTATTCTCTGCGT-CAGGAATCGAACTCCAGTTT  Raphanus raphanistrum subsp. landra
FD563321       --> CTTTCGAACCGATTC-ATATTCTCTGCGT-CAGGAATCGAACTCCAGTTT  Raphanus sativus var. oleiformis
FD937866       --> CTTTCGAATCGATTCGTTATTCTCTGCGTTCAGGAATCGAACTCCAGTTT  Raphanus sativus var. oleiformis
EY933159       --> CTTTCGAATCGATTCGTTATTCTCTGCGTTCAGGAATCGAACTCCAGTTT  Raphanus sativus var. oleiformis
EY948458       --> CTTTCGAATCGATTCGTTATTCTCTGCGTTCA--------ACTCCAGTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD989291       --> CTTTCGAATCGATTCGTTATTCTCTGCGTTCAGGAATCGAACTCCATTTT  Raphanus raphanistrum subsp. landra
EV549381       --> -TTTCGAATCGATTCGTTATTCTCTGCGTTCAGGAATCGAACTCCATTTT  Raphanus raphanistrum subsp. raphanistrum (NY)

               151    -    201
UN16258        --> TTCCGATTTCAAAATCTCTTTCGAGAAAACGATGGGAAGAGGCAAGTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544866       <-- TTCCGATTTCAAAATCTCTTTCGAGAAAACGATGGGAAGAGGCAAGTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV545195       <-- TTCCGATTTCAAAATCTCTTTCGAGAAAACGATGGGAGGAGGCAAGTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX907988       <-- TTCCGATTTCAAAATCTCTTTCGAGAAAACGATGGGAAGAGGCAAGTTCA  Raphanus sativus cv Rat-Tail Radish #3870
FD985092       <-- TTCCGATTTTAAA-TCTCTTTCGAGAAAACGATGGGAAGAGGCAAGTTCA  Raphanus raphanistrum subsp. landra
EX899435       <-- ..........AAAATCTCTTTCGAGAAAAGGATGGGAAGAGGCAAGTTCA  Raphanus sativus cv Early Scarlet Globe
EY928707       <-- .................CTTTCGAGAAAAGGATGGGAAGAGGCAAGTTCA  Raphanus sativus var. oleiformis
FD566986       <-- ..................................................  Raphanus sativus var. oleiformis
FD553076       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY944164       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD934393       <-- ..................................................  Raphanus sativus var. oleiformis
FD580942       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD549915       --> TTCCGATTTCAAAATCTCTTTCGAGAAAACGATGGGAAGAGGCAAGTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX895273       --> TTCCGATTTCAAAATCTCTTTCGAGAAAAGGATGGGAAGAGGCAAGTTCA  Raphanus sativus cv Early Scarlet Globe
FD576448       --> TTCCGATTTCAAAATCTCTTTCGAGAAAACGATGGGAAGAGGCAAGTTCA  Raphanus sativus cv Rat-Tail Radish #3870
EV549799       --> TTCCGATTTCAAAATCTCTTTCGAGAAAACGATGGGAGGAGGCAAGTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556844       --> ATCCGATTTCAAAATCTCTTTCGAGAAAACGATGGGAAGAGGCAAGTTCA  Raphanus raphanistrum subsp. landra
FD563321       --> ATCCGATTTCAAAATCTCTTTCGAGAAAACGATGGGAAGAGGCAAGTTCA  Raphanus sativus var. oleiformis
FD937866       --> TTCCGATTTCAAAATCTCTTTCGAGAAAAGGATGGGAAGAGGCAAGTTCA  Raphanus sativus var. oleiformis
EY933159       --> TTCCGATTTCAAAATCTCTTTCGAGAAAAGGATGGGAAGAGGCAAGTTCA  Raphanus sativus var. oleiformis
EY948458       --> TTCCGATTTCAAAATCTCTTTCGAGAAAACGATGGGAAGAGGCAAGTTCA  Raphanus sativus cv Rat-Tail Radish #3870
FD989291       --> TTCCGATTTTAAA-TCTCTTTCGAGAAAACGATGGGAAGAGGCAAGTTCA  Raphanus raphanistrum subsp. landra
EV549381       --> TTCCGATTTCAAAATCTCTTTCGAGAAAACGATGGGAAGAGGCAAGTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)

               201    -    251
UN16258        --> AAGGGAAACCTACAGGCCAGCGACGATTCTCAAGCGCAGCTGAGATACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544866       <-- AAGGGAAACCTACAGGCCAGCGACGATTCTCAAGCGCAGCTGAGATACTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV545195       <-- AAGGGAAACCTACAGGCCAGCGACGATTCTCAAGCGCAGCTGAGATACTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX907988       <-- AAGGGAAACCTACAGGCCAGCGACGATTCTCAAGCGCAGCTGAGATACTT  Raphanus sativus cv Rat-Tail Radish #3870
FD985092       <-- AAGGGAAACCTACAGGCCAGCGACGATTCTCAAGCGCAGCTGAGATACTT  Raphanus raphanistrum subsp. landra
EX899435       <-- AAGGGAAACCCACAGGCCAGCGACGATTCTCAAGCGCAGCTGAGATTCTT  Raphanus sativus cv Early Scarlet Globe
EY928707       <-- AAGGGAAACCCACAGGCCAGCGACGATTCTCAAGCGCAGCTGAGATTCTT  Raphanus sativus var. oleiformis
FD566986       <-- .........................ATTCTCAAGCGCAGCTGAGATACTT  Raphanus sativus var. oleiformis
FD553076       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY944164       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD934393       <-- ..................................................  Raphanus sativus var. oleiformis
FD580942       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD549915       --> AAGGGAAACCTACAGGCCAGCGACGATTCTCAAGCGCAGCTGAGATACTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX895273       --> AAGGGAAACCCACAGGCCAGCGACGATTCTCAAGCGCAGCTGAGATTCTT  Raphanus sativus cv Early Scarlet Globe
FD576448       --> AAGGGAAACCTACAGGCCAGCGACGATTCTCAAGCGCAGCTGAGATACTT  Raphanus sativus cv Rat-Tail Radish #3870
EV549799       --> AAGGGAAACCTACAGGCCAGCGACGATTCTCAAGCGCAGCTGAGATACTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556844       --> AAGGGAAACCCACAGGCCAGCGACGATTCTCAAGCGCAGCTGAGATTCTT  Raphanus raphanistrum subsp. landra
FD563321       --> AAGGGAAACCCACAGGCCAGCGACGATTCTCAAGCGCAGCTGAGATACTT  Raphanus sativus var. oleiformis
FD937866       --> AAGGGAAACCCACAGGCCAGCGACGATTCTCAAGC-CAGCTGAGATTCTT  Raphanus sativus var. oleiformis
EY933159       --> AAGGGAAACCCACAGGCCAGCGACGATTCTCAAGCGCAGCTGAGATTCTT  Raphanus sativus var. oleiformis
EY948458       --> AAGGGAAACCTACAGGCCAGCGACGATTCTCAAGCGCATCTGAGATACTT  Raphanus sativus cv Rat-Tail Radish #3870
FD989291       --> AAGGGAAACCTACAGGCCAGCGACGATTCTCAAGCGCAGCTGAGATACTT  Raphanus raphanistrum subsp. landra
EV549381       --> AAGGGAAACCTACAGGCCAGCGACGATTCTCAAGCGCAGCTGAGATACTT  Raphanus raphanistrum subsp. raphanistrum (NY)

               251    -    301
UN16258        --> GCTGGCACTTCTGCTGCACGTCCTCGTTCATTCAAGCAGAAAGAAGCGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544866       <-- GCTGGCACTTCTGCTGCGCGTCCTCGTTCGTTCAAGCAGAAAGAAGCGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV545195       <-- GCTGGCACTTTTGCTGCGCGTCCTCGTTCGTTCAAGCAGAAAGAAGCGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX907988       <-- GCTGGCACTTCTGCTGCACGTCCTCGTTCATTTAAGCAGAAAGAAGCGGA  Raphanus sativus cv Rat-Tail Radish #3870
FD985092       <-- GCTGGCACTTTTGCTGCACGTCCTCGTTCATTCAAGCAGAAAGAAGCGGA  Raphanus raphanistrum subsp. landra
EX899435       <-- GCTGGCACTTCTGCTGCACGTCCTCGTTCATTCAAGCAGAAAGAAGCGGA  Raphanus sativus cv Early Scarlet Globe
EY928707       <-- GCTGGCACTTCTGCTGCGCGTCCTCGTTCATTCAAGCAGAAAGAAGCGGA  Raphanus sativus var. oleiformis
FD566986       <-- GCTGGCACTTTTGCTGCACGTCCTCGTTCATTCAAGCA-AAAGAATCGGA  Raphanus sativus var. oleiformis
FD553076       <-- ...............gcgCGTCCTCGTTCATTCAAGCAGAAAGAAGCGGA  Raphanus raphanistrum subsp. landra
EY944164       <-- .......................TCGTTCATTTAAGCAGAAAGAAGCGGA  Raphanus sativus cv Rat-Tail Radish #3870
FD934393       <-- ..........................TTCATTCAAGCAGAAAGAAGCGGA  Raphanus sativus var. oleiformis
FD580942       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD549915       --> GCTGGCACTTCTGCTGCGCGTCCTCGTTCGTTCAAGCAGAAAGAAGCGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX895273       --> GCTGGCACTTCTGCTGCACGTCCTCGTTCATTCAAGCAGAAAGAAGCGGA  Raphanus sativus cv Early Scarlet Globe
FD576448       --> GCTGGCACTTCTGCTGCACGTCCTCGTTCATTTAAGCAGAAAGAAGCGGA  Raphanus sativus cv Rat-Tail Radish #3870
EV549799       --> GCTGGCACTTCTGCTGCGCGTCCTCGTTCGTTCAAGCAGAAAGAAGCGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556844       --> GCTGGCACTTCTGCTGCGCGTCCTCGTTCATTCAAGCAGAAAGAAGCGGA  Raphanus raphanistrum subsp. landra
FD563321       --> GCTGGCACTTCTGCTGCACGTCCTCGTTCATTCAAGCA-AAAGAATCGGA  Raphanus sativus var. oleiformis
FD937866       --> GCTGGCACTTCTGCTGCACGTCCTCGTTCATTCAAGCAGAAAGAAGCGGA  Raphanus sativus var. oleiformis
EY933159       --> GCTGGCACTTCTGCTGCGCGTCCTCGTTCATTCAAGCAGAAAGAAGCGGA  Raphanus sativus var. oleiformis
EY948458       --> GCTGGCACTTCTGCTGCACGTCCTCGTTCATTTAAGCAGAAAGAAGCGGA  Raphanus sativus cv Rat-Tail Radish #3870
FD989291       --> GCTGGCACTTCTGCTGCACGTCCTCGTTCATTCAAGCAGAAAGAAGCGGA  Raphanus raphanistrum subsp. landra
EV549381       --> GCTGGCACTTCTGCTGCGCGTCCTCGTTCGTTCAAGCAGAAAGAAGCGGA  Raphanus raphanistrum subsp. raphanistrum (NY)

               301    -    351
UN16258        --> GTACGAAGAAGATGTGGAAGAGGAGGAGTCTGAGGAGGAATCTGAAGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544866       <-- GTACGAAGAAGATGTGGAAGAGGAGGAGTCTGAGGAGGAATCTGAAGAAG
EV545195       <-- GTACGAAGAAGATGTGGAAGAGGAGGAGTCTGAGGAGGAATCTGAAGAAG
EX907988       <-- GTACGAAGAAGATGTGGAAGAGGAGGAGTCTGAGGAGGAATCTGAAGAAG
FD985092       <-- GTATGAAGAAGATGTGGAAGAGGAGGAGTCTGAGGAGGAATCTGAAGAAG
EX899435       <-- GTACGAAGAAGATGTGGAAGAGGAGGAGTCTGAGGAGGAATCTGAAGAAG
EY928707       <-- GTACGAAGAAGATGTGGAAGAGGAGGAGTCTGAGGAGGAATCTGAAGAAG
FD566986       <-- GTACGAAGAAGATGTGGAAGAGGAGGAGTCTGAGGAGGAATCTGAAGAAG
FD553076       <-- GTACGAAGAAGATGTGGAAGAGGAGGAGTCTGAGGAGGAATCTGAAGAAG
EY944164       <-- GTACGAAGAAGATGTGGAAGAGGAGGAGTCTGAGGAGGAATCTGAAGAAG
FD934393       <-- GTACGAAGAAGATGTGGAAGAGGAGGAGTCTGAGGAGGAATCTGAAGAAG
FD580942       <-- ..................................................
FD549915       --> GTACGAAGAAGATGTGGAAGAGGAGGAGTCTGAGGAGGAATCTGAAGAAG
EX895273       --> GTACGAAGAAGATGTGGAAGAGGAGGAGTCTGAGGAGGAATCTGAAGAAG
FD576448       --> GTACGAAGAAGATGTGGAAGAGGAGGAGTCTGAGGAGGAATCTGAAGAAG
EV549799       --> GTACGAAGAAGATGTGGAAGAGGAGGAGTCTGAGGAGGAATCTGAAGAAG
FD556844       --> GTACGAAGAAGATGTGGAAGAGGAGGAGTCTGAGGAGGAATCTGAAGAAG
FD563321       --> GTACGAAGAAGATGTGGAAGAGGAGGAGTCTGAGGAGGAATCTGAAGAAG
FD937866       --> GTACGAAGAAGATGTGGAAGAGGAGGAGTCTGAGGAGGAATCTGAAGAAG
EY933159       --> GTACGAAGAAGATGTGGAAGAGGAGGAGTCTGAGGAGGAATCTGAAGAAG
EY948458       --> GTACGAAGAAGATGTGGAAGAGGAGGAGTCTGAGGAGGAATCTGAAGAAG
FD989291       --> GTATGAAGAAGATGTGGAAGAGGAGGAGTCTGAGGAGGAATCTGAAGAAG
EV549381       --> GTACGAAGAAGATGTGGAAGAGGAGGAGTCTGAGGAGGAATCTGAAGAAG

               351    -    401
UN16258        --> AATCCGAAGATGATTCTGATGTGAAGAAGAAAGGACATGAGGCTCTGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544866       <-- AATCCGAAGATGATTCTGATGTGAAGAAGAAAGGACATGAGGCTTTGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV545195       <-- AAT--------CCGAAGAATGTGAAGAAGAAAGGACATGAGGCTTTGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX907988       <-- AATCCGAAGATGATTCTGATGTGAAGAAGAAAGGACATGAGGCTCTGATC  Raphanus sativus cv Rat-Tail Radish #3870
FD985092       <-- AATCCGAAGATGATTTTGATGTGAAGAAGAAAGGACATGAGGCTCTGATC  Raphanus raphanistrum subsp. landra
EX899435       <-- AATCCGAAGATGATTCTGATGTGAAGAAGAAAGGACATGAGGCTCTGATC  Raphanus sativus cv Early Scarlet Globe
EY928707       <-- AATCCGAAGATGATTCTGATGTGAAGAAGAAAGGACATGAGGCTCTGATC  Raphanus sativus var. oleiformis
FD566986       <-- AATCCGAAGATGATTTTGATGTGAAGAAGAAAGGACATGAGGCTTTGATC  Raphanus sativus var. oleiformis
FD553076       <-- AATCCGAAGATGATTCTGATGTTAAGAAGAAAGGACATGAGGCTTTGATC  Raphanus raphanistrum subsp. landra
EY944164       <-- AATCCGAAGATGATTCTGATGTGAAGAAGGAAGGACATGAGGCTCTGATC  Raphanus sativus cv Rat-Tail Radish #3870
FD934393       <-- AATCCGAAGATGATTCTGATGTGAAGAAGAAAGGACATGAGGCTCTGATC  Raphanus sativus var. oleiformis
FD580942       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD549915       --> AATCCGAAGATGATTCTGATGTGAAGAAGAAAGGACATGAGGCTTTGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX895273       --> AATCCGAAGATGATTCTGATGTGAAGAAGAAAGGACATGAGGCTCTGATC  Raphanus sativus cv Early Scarlet Globe
FD576448       --> AATCCGAAGATGATTCTGATGTGAAGAAGAAAGGACATGAGGCTCTGATC  Raphanus sativus cv Rat-Tail Radish #3870
EV549799       --> AATCCGAAGA--------ATGTGAAGAAGAAAGGACATGAGGCTTTGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556844       --> AATCCGAAGATGATTCTGATGTTAAGAAGAAAGGACATGAGGCTTTGATC  Raphanus raphanistrum subsp. landra
FD563321       --> AATCCGAAGATGATTCTGATGTGAAGAAGAAAGGACATGAGGCTCTGATC  Raphanus sativus var. oleiformis
FD937866       --> AATCCGAAGATGATTCTGATGTGAAGAAGAAAGGACATGAGGCTCTGATC  Raphanus sativus var. oleiformis
EY933159       --> AATCCGAAGATGATTCTGATGTGAAGAAGAAAGGACATGAGGCTCTGATC  Raphanus sativus var. oleiformis
EY948458       --> AATCCGAAGATGATTCTGATGTGAAGAAGGAAGGACATGAGGCTCTGATC  Raphanus sativus cv Rat-Tail Radish #3870
FD989291       --> AATCCGAAGATGATTCTGATGTGAAGAAGAAAGGACATGAGGCTCTGATC  Raphanus raphanistrum subsp. landra
EV549381       --> AATCCGAAGATGATTCTGATGTGAAGAAGAAAGGACATGAGGCTTTGATC  Raphanus raphanistrum subsp. raphanistrum (NY)

               401    -    451
UN16258        --> CAAGTTGATAACCCTAACAGAGCAAAACCAAAGACTTTGAAAGCAAGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544866       <-- CAAGTTGATAACCCTAACAGAGCAAAACCAAAGACTTTGAAAGCAAGAGA
EV545195       <-- CAAGTTGATAACCCTAACAGAGCAAAACCAAAGACTTTGAAAGCAAGAGA
EX907988       <-- CAAGTTGATAACCCTAACAGAGCAAAACCAAAGACTTTGAAAGCAAGAGA
FD985092       <-- CAAGTTGATAACCCTAACAGAGCAAAACCAAAGACTTTGAAAGCAAGAGA
EX899435       <-- CAAGTTGATAACCCTAACAGAGCAAAACCAAAGACTTTGAAAGCGAGAGA
EY928707       <-- CAAGTTGATAACCCTAACAGAGCAAAACCAAAGACTTTGAAAGCAAGAGA
FD566986       <-- CAAGTTGATAACCCTAACAGAGCAAAACCAAAGACTTTGAAAGCAAGAGA
FD553076       <-- CAAGTTGATAACCCTAACAGAGCAAAACCAAAGACTTTGAAGGCAAGAGA
EY944164       <-- CAAGTTGATAACCCTAACAGAGCAAAACCAAAGACTTTGAAAGCAAGAGA
FD934393       <-- CAAGTTGATAACCCTAACAGAGCAAAACCAAAGACTTTGAAAGCAAGAGA
FD580942       <-- ..................................................
FD549915       --> CAAGTTGATTACCCTAACAGAGCAAAACCAAAGACTTTGAAAGCAAGAGA
EX895273       --> CAAGTTGATAACCCTAACAGAGCAAAACCAAAGACTTTGAAAGCGAGAGA
FD576448       --> CAAGTTGATAACCCTAACAGAGCAAAACCAAAGACTTTGAAAGCAAGAGA
EV549799       --> CAAGTTGATAACCCTAACAGAGCAAAACCAAAGACTTTGAAAGCAAGAGA
FD556844       --> CAAGTTGATAACCCTAACAGAGCAAAACCAAAGACTTTGAAGGCAAGAGA
FD563321       --> CAAGTTGATAACCCTAACAGAGCAAAACCAAAGACTTTGAAAGCAAGAGA
FD937866       --> CAAGTTGATAACCCTAACAGAGCAAAACCAAAGACTTTGAAAGCAAGAGA
EY933159       --> CAAGTTGATAACCCTAACAGAGCAAAACCAAAGACTTTGAAAGCAAGAGA
EY948458       --> CAAGTTGATAACCCTAACAGAGCAAAACCAAAGACTTTGAAAGCAAGAGA
FD989291       --> CAAGTTGATAACCCTAACAGAGCAAAACCAAAGACTTTGAAAGCAAGAGA
EV549381       --> CAAGTTGATAACCCTAACAGAGCAAAACCAAAGACTTTGAAAGCAAGAGA

               451    -    501
UN16258        --> CCTTGATGCAAGTAAAACCACTGAACTCTCGAGGCGTGAAAGGGAGGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544866       <-- CCTTGATGCAAGTAAAACCACTGAACTCTCGAGGCGTGAAAGGGAGGAGC
EV545195       <-- CCTTGATGCAAGTAAAACCACTGAACTCTCGAGGCGTGAAAGGGAGGAGC
EX907988       <-- CCTTGATGCAAGTAAAACCACTGAACTCTCGAGGCGTGAAAGGGAGGAGC
FD985092       <-- CCTTGATGCAAGTAAAACCACTGAACTCTCGAGGCGTGAAAGGGAGGAGC
EX899435       <-- CCTTGATGCAAGTAAAGCCACTGAACTCTCGAGGCGTGAAAGGGTGGAGC
EY928707       <-- CCTTGATGCAAGTAAAACCACTGAACTCTCGAGGCGTGAAAGGGAGGAGC
FD566986       <-- CCTTGATGCAAGTAAAACCACTGAACTCTCGAGGCGTGAAAGGGAGGAGC
FD553076       <-- CCTTGATGCAAGTAAAACCACTGAACTCTCGATGCGTGAAAGGGAGGAGC
EY944164       <-- CCTTGATGCAAGTAAAACCACTGAACTCTCGAGGCGTGAAAGGGAGGAGC
FD934393       <-- CCTTGATGCAAGTAAAACCACTGAACTCTCGAGGCGTGAAAGGGAGGAGC
FD580942       <-- ..................................................
FD549915       --> CCTTGATGCAAGTAAAACCACTGAACTCTCGAGGCGTGAAAGGGAGGAGC
EX895273       --> CCTTGATGCAAGTAAAGCCACTGAACTCTCGAGGCGTGAAAGGGTGGAGC
FD576448       --> CCTTGATGCAAGTAAAACCACTGAACTCTCGAGGCGTGAAAGGGAGGAGC
EV549799       --> CCTTGATGCAAGTAAAACCACTGAACTCTCGAGGCGTGAAAGGGAGGAGC
FD556844       --> CCTTGATGCAAGTAAAACCACTGAACTCTCGATGCGTGAAAGGGAGGAGC
FD563321       --> CCTTGATGCAAGTAAAACCACTGAACTCTCGAGGCGTGAAAGGGAGGAGC
FD937866       --> CCTTGATGCAAGTAAAACCACTGAACTCTCGAGGCGTGAAAGGGAGGAGC
EY933159       --> CCTTGATGCAAGTAAAACCACTGAACTCTCGAGGCGTGAAAGGGAGGAGC
EY948458       --> CCTTGATGCAAGTAAAACCACTGAACTCTCGAGGCGTGAAAGGGAGGAGC
FD989291       --> CCTTGATGCAAGTAAAACCACTGAACTCTCGAGGCGTGAAAGGGAGGAGC
EV549381       --> CCTTGATGCAAGTAAAACCACTGAACTCTCGAGGCGTGAAAGGGAGGAGC

               501    -    551
UN16258        --> TAGAGAAGCAGCGAGCTCATGAGCGATACATGAGATTACAGGAGCAAGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544866       <-- TAGAGAAGCAGCGAGCTCATGAGCGATACATGAGATTACAGGAGCAAGGC
EV545195       <-- TAGAGAAGCAGCGAGCTCATGAGCGATACATGAGATTACAGGAGCAAGGC
EX907988       <-- TAGAGAAGCAGCGAGCTCATGAGCGATACATGAGATTGCAGGAGCAAGGC
FD985092       <-- TAGAGAAGCAGCGAGCTCATGAGCGATACATGAGATTACAGGAGCAAGGC
EX899435       <-- TAGAGAAGCAGCGAGCTCATGAGCGATACATGAGATTACAGGAGCAAGGC
EY928707       <-- TAGAGAAGCAGCGAGCTCATGAGCGATACATGAGATTACAGGAGCAAGGC
FD566986       <-- TATAGAAGCGGCGAGCTCATGAGCGATACATGAGATTACAGGAGCAAGGC
FD553076       <-- TAGAGAAGCAGCGAGCTCATGAGCGATACATGAGATTACAGGAGCAAGGC
EY944164       <-- TAGAGAAGCAGCGAGCTCATGAGCGATACATGAGATTGCAGGAGCAAGGC
FD934393       <-- TAGAGAAGCAGCGAGCTCATGAGCGATACATGAGATTACAGGAGCAAGGC
FD580942       <-- ..................................................
FD549915       --> TAGAGAAGCAGCGAGCTCATGAGCGATACATGAGATTACAGGAGCAAGGC
EX895273       --> TAGAGAAGCAGCGAGCTCATGAGCGATACATGAGATTACAGGAGCAAGGC
FD576448       --> TAGAGAAGCAGCGAGCTCATGAGCGATACATGAGATTGCAGGAGCAAGGC
EV549799       --> TAGAGAAGCAGCGAGCTCATGAGCGATACATGAGATTACAGGAGCAAGGC
FD556844       --> TAGAGAAGCAGCGAGCTCATGAGCGATACATGAGATTACAGGAGCAAGGC
FD563321       --> TATAGAAGCGGCGAGCTCATGAGCGATACATGAGATTACAGGAGCAAGGC
FD937866       --> TAGAGAAGCAGCGAGCTCATGAGCGATACATGAGATTACAGGAGCAAGGC
EY933159       --> TAGAGAAGCAGCGAGCTCATGAGCGATACATGAGATTACAGGAGCAAGGC
EY948458       --> TAGAGAAGCAGCGAGCTCATGAGCGATACATGAGATTGCAGGAGCAAGGC
FD989291       --> TAGAGAAGCAGCGAGCTCATGAGCGATACATGAGATTACAGGAGCAAGGC
EV549381       --> TAGAGAAGCAGCGAGCTCATGAGCGATACATGAGATTACAGGAGCAAGGC

               551    -    601
UN16258        --> AAAACCGAACAAGCAAGAAAGGATTTGGATCGTTTGGCTCTGATTCGCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544866       <-- AAAACCGAACAAGCAAGAAAGGATTTGGATCGTTTGGCTCTGATTCGCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV545195       <-- AAAACCGAACAAGCAAGAAAGGATTTGGATCGTTTGGCTCTGATTCGCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX907988       <-- AAAACCGAACAAGCAAGAAAGGATTTGGATCGTTTGGCTCTGATTCGTCA  Raphanus sativus cv Rat-Tail Radish #3870
FD985092       <-- AAAACCGAACAAGCAAGAAAGGATTTGGATCGTTTGGCTCTGATTCGCCA  Raphanus raphanistrum subsp. landra
EX899435       <-- AAAACCGAACAAGCAAGAAAGGATTTGGATCGTTTGGCTCTGAGTCGCCA  Raphanus sativus cv Early Scarlet Globe
EY928707       <-- AAAACCGAACAAGCAAGAAAGGATTTGGATCGTTTGGCTTTGAGTCGCCA  Raphanus sativus var. oleiformis
FD566986       <-- AAAACCGAACAAGCAAGAAAGGATTTGGATCGTTTGGCTTTGATTCGCCA  Raphanus sativus var. oleiformis
FD553076       <-- AAAACCGAACAAGCAAGAAAGGATTTGGATCGTTTGGCTTTGATTCGCCA  Raphanus raphanistrum subsp. landra
EY944164       <-- AAAACCGAACAAGCAAGAAAGGATTTGGATCGTTTGGCTCTGATTCGTCA  Raphanus sativus cv Rat-Tail Radish #3870
FD934393       <-- AAAACCGAACAAGCAAGAAGGGATTTGGATCGTTTGGCTTTGAGTCGCCA  Raphanus sativus var. oleiformis
FD580942       <-- ..........................................ATTCGTCA  Raphanus sativus cv Rat-Tail Radish #3870
FD549915       --> AAAACCGAACAAGCAAGAAAGGATTTGGATCGTTTGGCTCTGATTCGCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX895273       --> AAAACCGAACAAGCAAGAAAGGATTTGGATCGTTTGGCTCTGAGTCGCCA  Raphanus sativus cv Early Scarlet Globe
FD576448       --> AAAACCGAACAAGCAAGAAAGGATTTGGATCGTTTGGCTCTGATTCGTCA  Raphanus sativus cv Rat-Tail Radish #3870
EV549799       --> AAAACCGAACAAGCAAGAAAGGATTTGGATCGTTTGGCTCTGATTCGCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556844       --> AAAACCGAACAAGCAAGAAAGGATTTGGATCGTTTGGCTCTGATTCGCCA  Raphanus raphanistrum subsp. landra
FD563321       --> AAAACCGAACAAGCAAGAAAGGATTTGGATCGTTTGGCTCTGATTCGCCA  Raphanus sativus var. oleiformis
FD937866       --> AAAACCGAACAAGCAAGAAGGGATTTGGATCGTTTGGCTCTGAGTCGCCA  Raphanus sativus var. oleiformis
EY933159       --> AAAACCGAACAAGCAAGAAAGGATTTGGATCGTTTGGCTCTGAGTCGCCA  Raphanus sativus var. oleiformis
EY948458       --> AAAACCGAACAAGCAAGAAAGGATTTGGATCGTTTGGCTCTGATTCGTCA  Raphanus sativus cv Rat-Tail Radish #3870
FD989291       --> AAAACCGAACAAGCAAGAAAGGATTTGGATCGTTTGGCTCTGATTCGCCA  Raphanus raphanistrum subsp. landra
EV549381       --> AAAACCGAACAAGCAAGAAAGGATTTGGATCGTTTGGCTCTGATTCG...  Raphanus raphanistrum subsp. raphanistrum (NY)

               601    -    651
UN16258        --> ACAGAGAGAAGAAGCTGCCAAGAAGCGTGAAGAGGAAAAAGCAGCAAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544866       <-- ACAGAGAGAAGAAGCTGCCAAGAAGCGTGAAGAGGAAAAAGCAGTAAGAG
EV545195       <-- ACAGAGAGAAGAAGCTGCCAAGAAGCGTGAAGAGGAAAAAGCAGCAAGAG
EX907988       <-- ACAGAGAGAAGAAGCTGCCAAGAAGCGTGAAGAGGAAAAAGCAGCAAGAG
FD985092       <-- ACAGAGAGAAGAAGCTGCCAAAAAGCGTGAAGAGGAAAAAGCAGCAAGAG
EX899435       <-- ACAGAGAGAAGAAGCTGCCAAGAAGCGTGAAGAGGAAAAAGCAGCAAGAG
EY928707       <-- ACAGAGAGAAGAAGCTGCCAAGAAGCGTGAAGAGGAAAAAGCAGCAAGAG
FD566986       <-- ACAGAGAGAAGAAGCTGCCAAGAAGCGTGAAGAGGAAAAAGCAGCAAGAG
FD553076       <-- ACAGAGAGAAGAAGCTGCCAAGAAGCGTGAAGAGGAAAAAGCAGCAAGAG
EY944164       <-- ACAGAGAGAAGAAGCTGCCAAGAAGCGTGAAGAGGAAAAAGCAGCAAGAG
FD934393       <-- ACAGAGAGAAGAAGCTGCCAAGAAGCGTGAAGAGGAAAAAGCAGCAAGTG
FD580942       <-- ACAGAGAGAAGAAGCTGCCAAGAAGCGTGAAGAGGAAAA-GCAGCAAGAG
FD549915       --> ACAGAGAGAAGAAGCTGCCAAGAAGCGTGAAGAGGAAAA-GCAGCAAGAG
EX895273       --> ACAGAGAGAAGAAGCTGCCAAGAAGCGTGAAGAGGAAAAAGCAGCAAGAG
FD576448       --> ACAGAGAGAAGAAGCTGCCAAGAAGCGTGAAGAGGAAAA-GCAGCAAGAG
EV549799       --> ACAGAGAGAAGAAGCTGCCAAGAAGCGTGAAGAGGAAAAAGCAGCAAGAG
FD556844       --> ACAGAGAGAAGAAGCTGCCAAGAAGCGTGAAGAGGAAAAAGCAGCAAGAG
FD563321       --> ACAGAGAGAAGAAGCTGCCAAGAAGCGTGAAGAGGAAAAAGCAGCAAGAG
FD937866       --> ACAGAGAGAAGAAGCTGCCAAGAAGCGTGAAGAGGAAAAAGCAGCAAGTG
EY933159       --> ACAGAGAGAAGAAGCTGCCAAGAAGCGTGAAGAGGAAAAAGCAGCAAGAG
EY948458       --> ACAGAGAGAAGAAGCTGCCAAGAAGCGTGAAGAGGAAAAAGCAGCAAGAG
FD989291       --> ACAGAGAGAAGAAGCTGCCAAAAAGCGTGAAGAGGAAAAAGCAGCAAGAG
EV549381       --> ..................................................

               651    -    701
UN16258        --> ACGCGAAGAAAGTCGATGCTCGCAAATGAAAGAAAACTCCTCAGATGCG-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544866       <-- ACGCGAAGAAAGTCGATGCTCGCAAATGAAAGAAAACTCCTCAGATGCG-
EV545195       <-- ACGCGAAGAAAGTCGATGCTCGCAAATGAAAGAAAACTCCTCAGATGCG-
EX907988       <-- ACGCGAAGAAAGTCGATGCTCGCAAATGAAAGAAAACTCCTCAGATGCGG
FD985092       <-- ACGCGAAGAAAGTCGATGCTCGCAAATGAAAGAAAACTCCTCAGATGCG-
EX899435       <-- ACGCGAAGAAAGTCGATGCTCGCAAATGAAAGAAAACTCCTCAGATGCG-
EY928707       <-- ACGCGAAGAAAGTCGATGCTCGCAAATGAAAGAAAACTCCTCAGATGCG-
FD566986       <-- ACGCGAAGAAAGTCGATGCTCGCAAATGAAAGAAAACTCCTCAGATGCGG
FD553076       <-- ACGCGAAGAAAGTCGATGCTCGCAAATGAAAGAAAACTCCTCAGATGCG-
EY944164       <-- ACGCGAAGAAAGTCGATGCTCGCAAATGAAAGAAAACTCCTCAGATGCGG
FD934393       <-- ACGCGAAGAAAGTCGATGCTCGCAAATGAAAGAAAACTCCTCAGATGCG-
FD580942       <-- ACGCGAAGAAAGTCGATGCTCGCAAATGAAAGAAAACTCCTCAGATGCGG
FD549915       --> ACGCGAAGAAAGTCGATGCTCGCAA-TG-AAG-AAACT-CTCAGATGCG-
EX895273       --> ACGCGAAGAAAGTCGATGCTCGCAAATGAAAGAAAACTCCTCAGATGCG-
FD576448       --> ACGCGAAGAAAGTCGATGCTCGCAAATGAAAGAAAACTCCTCAGAT....
EV549799       --> ACGCGAAGAAAGTCGATGCTCGCAAATGAAAGAAAACTCCTCAGATGCG-
FD556844       --> ACGCGAAGAAAGTCGATGCTCGCAAATGAAAGAAAACTCCTCAGATGCG-
FD563321       --> ACGCGAAGAAAGTCGATGCTCGCAAATGAAAGAAAACTCCTCAGATGCGG
FD937866       --> ACGCGAAGAAAGTCGATGCTCGCAAATGAAAGAAAACTCCTCAGATGCG-
EY933159       --> ACGCGAAGAAAGTCGATGCTCGCAAATGAAAGAAAACTCCTCAGATGCG-
EY948458       --> ACGCGAAGAAAGTCGATGCTCGCAAATGAAAGAAA-CTCCTCAGATGCGG
FD989291       --> ACGCGAAGAAAGTCGATGCTCGCAAATGAAAGAAAACTCCTCAGATGCG-
EV549381       --> ..................................................

               701    -    751
UN16258        --> TTTGTCTTTACTTTGGTCGTTTTCGATTGGTAAACAGCTTCACCTTTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544866       <-- TTTGTCTTTACTTTGGTCGTTTTCGATTGGTAAACAGGAAGACCTTTTGT
EV545195       <-- TTTGTCTTTACTTTGGTCGTTTTCGATTGGTAAACAGGAAGACTTTTTGT
EX907988       <-- TTTGTCTTTACTTTGATCATTTTCGATTGGTAAACAGCTTCACCTTTTGT
FD985092       <-- TTTGTCTTTACTTTGATCATTTTCGATTGGTAAACAGCTTCACCTTTTGT
EX899435       <-- TTTGTCTTTACTTTGGTCGTTTTCGATTGG....................
EY928707       <-- TTTGTCTTTACTTTGGTCGTTTTCGATTGGTAAACAGGAAGACCTTTTGT
FD566986       <-- TTTGTCTTTACTTTGATCATTTTCGATTGGTAAACAGCTTCCCCTTTTGT
FD553076       <-- TTTGTCTTTACTTTGGTCGTTTTCGATTGGTAAACAGGAAGACCTTTTGT
EY944164       <-- TTTGTCTTTACTTTGATCATTTTCGATTGGTAAACAGCTTCACCTTTTGT
FD934393       <-- TTTGTCTTTACTTTGGTCGTTTTCGATTGGTAAACAGGAAGACCTTTTGT
FD580942       <-- TTTGTCTTTACTTTGATCATTTTCGATTGGTAAACAGCTTCACCTTTTGT
FD549915       --> TT-GTCTTTACTTTGGTCGTTTTCGAT-GGTAAcag..............
EX895273       --> TTTGTCTTTACTTTGGTCGTTTTCGATggta...................
FD576448       --> ..................................................
EV549799       --> TTTGTCTTTACTTTGGTCGTTTTCGATTGGTAA.................
FD556844       --> TTTGTCTTTACTTTGGTCGTTTTCGAT.......................
FD563321       --> TTTGTCTTTACTTTGATCATTTTCGATTGGTAAACAGCTTCACCTTTTGT
FD937866       --> TTTGTCTTTACT......................................
EY933159       --> TTTGTCTTTACTTTGGTCGTTTTCGATTGGTAAACAG-AAGACCTTTTGT
EY948458       --> TTTGTCTTTACTTTGATCATTTTCG.........................
FD989291       --> TTTGTCTTTACTTTGATCATTTTCGATTGGTAAACAGCTTCACCTTTTGT
EV549381       --> ..................................................

               751    -    801
UN16258        --> CTGTTTACTCAGTATTGTGTGGATCTTTATACATTTGAAAGTTATTAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544866       <-- CTGTTTACTCAGTATTATGTGGATCTTTATACATTTGAAAGTTATTAGCA
EV545195       <-- CTGTTTACTCAGTATTGTGTGGATCTTTATACATTTGAAAGTTATTAGCA
EX907988       <-- CTGTTTACTCAGTATTGTGTGGATCTTTATACATTTGAAAGTTATTAGCA
FD985092       <-- CTGTTTACTCATTATTGTGTGGATCTTTATACATTTGAAAGTTATTAGCA
EX899435       <-- ..................................................
EY928707       <-- CTGTTTACTCAGTATTGTGTGGATCTTTATACATTTGAAAGTTATTAGCA
FD566986       <-- CTGTTTACTCAGTATTGTGTGGATCTTTATACATTTGAAAGTTATTAGCA
FD553076       <-- CTGTTTACTCAGTATTGTGTGGATCTTTATACATTTGAAAGTTATTAGCA
EY944164       <-- CTGTTTACTCAGTATTGTGTGGATCTTTATACATTTGAAAGTTATTAGCA
FD934393       <-- CTGTTTACTCAGTATTGTGTGGATCTTTATACATTTGAAAGTTATTAGCA
FD580942       <-- CTGTTTACTCAGTATTGTGTGGATCTTTATACATTTGAAAGTTATTAGCA
FD549915       --> ..................................................
EX895273       --> ..................................................
FD576448       --> ..................................................
EV549799       --> ..................................................
FD556844       --> ..................................................
FD563321       --> CTGTTTACTCAGTATTGTGTGGATCTTTATACATTTGAAAGTTATTAGCA
FD937866       --> ..................................................
EY933159       --> CTGTTTACTCAGTATTGTGTGGATCTTTATACATTTGAA-GTTATTAGCA
EY948458       --> ..................................................
FD989291       --> CTGTT-ACTCATTATTGTGTGGATCTTTATACATTTGAAAGTTATTAGCA
EV549381       --> ..................................................

               801    -    851
UN16258        --> ATCCGGTTGAGAAAGCCATAAACAACATCAGCTTGACTTTCTTACATTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544866       <-- ATCCGGTTGAGAAAGCCATAAcc...........................
EV545195       <-- ATCCGGTTGAGAAAGCCATAAACAgc........................
EX907988       <-- ATCCGGTTGAGAAAGCCAT...............................
FD985092       <-- ATC...............................................
EX899435       <-- ..................................................
EY928707       <-- ATCCGGTTGAGAAAGCt.................................
FD566986       <-- ATCCGG............................................
FD553076       <-- ATCCGGTTGAGAAAGCCATAAACAACATCAGCTTGACTTGCTTACATTT.
EY944164       <-- ATCCGGTTGAGAAAGCCAT...............................
FD934393       <-- ATCCGGTTGAGAAAGCCATAAACAACATCAGCTTGACTTTCTTACATTTA
FD580942       <-- ATCCGGTTGAGAAAGCC.................................
FD549915       --> ..................................................
EX895273       --> ..................................................
FD576448       --> ..................................................
EV549799       --> ..................................................
FD556844       --> ..................................................
FD563321       --> ATCCGGTTGA........................................
FD937866       --> ..................................................
EY933159       --> ATCCGGTTGAGAAAGCt.................................
EY948458       --> ..................................................
FD989291       --> ATC...............................................
EV549381       --> ..................................................

               851    -    901
UN16258        --> TGTTAGATAACACAAGAGTTTATAAGAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544866       <-- ..............................
EV545195       <-- ..............................
EX907988       <-- ..............................
FD985092       <-- ..............................
EX899435       <-- ..............................
EY928707       <-- ..............................
FD566986       <-- ..............................
FD553076       <-- ..............................
EY944164       <-- ..............................
FD934393       <-- TGTTAGATAACACAAGAGTTTATAAGAAGT
FD580942       <-- ..............................
FD549915       --> ..............................
EX895273       --> ..............................
FD576448       --> ..............................
EV549799       --> ..............................
FD556844       --> ..............................
FD563321       --> ..............................
FD937866       --> ..............................
EY933159       --> ..............................
EY948458       --> ..............................
FD989291       --> ..............................
EV549381       --> ..............................