RadishBase

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Alignment for radish unigene UN16261

               1      -     51
UN16261        --> CTATGCTTAAGTGAAATCATTATAATCTGATTGTTTCAATATTTTACAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536215       <-- ..................................................
EY937857       <-- ..................................................
EX748615       <-- ..................................................
EX763534       <-- ..................................................
EV536221       <-- ..................................................
EY949317       <-- ..................................................
EX755355       <-- ..................................................
EY933085       <-- ..................................................
FD542179       <-- ..................................................
EY925275       <-- ..................................................
EX762515       <-- ..................................................
FD941059       <-- ..................................................
EY925319       <-- ..................................................
FD570927       <-- ..................................................
EY934103       --> CTATGCTTAAGTGAAATCATTATAATCTGATTGTTTCAATATTTTACAAT
FD936790       --> ....GCTTAAGTGAAATCATTATAATCTGATTGTTCCAATATTTTACAAT
EX752499       --> ..................................................
EV540721       --> ..................................................
FD538312       --> ..................................................
EX759458       --> ..................................................
EY920822       --> ..................................................
EY928652       --> ..................................................
EX767597       --> ..................................................

               51     -    101
UN16261        --> ACTGATTAGACTATTTTACAATACAAAAAAAAAAAATAAAGCAAAACATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536215       <-- ..................................................
EY937857       <-- ..................................................
EX748615       <-- ..................................................
EX763534       <-- ..................................................
EV536221       <-- ..................................................
EY949317       <-- ..................................................
EX755355       <-- ..................................................
EY933085       <-- ..................................................
FD542179       <-- ..................................................
EY925275       <-- ..................................................
EX762515       <-- ..................................................
FD941059       <-- ..................................................
EY925319       <-- ..................................................
FD570927       <-- ..................................................
EY934103       --> ACTGATTAGACTATTTTACAATACAAAAAAAAAAAATAAAGCAAAACATT
FD936790       --> ACTGATTAGACTATTTTACAATACAAAAAAAAAAA-TAAAGCAAAACATT
EX752499       --> ..................................................
EV540721       --> ..................................................
FD538312       --> ..................................................
EX759458       --> ..................................................
EY920822       --> ..................................................
EY928652       --> ..................................................
EX767597       --> ..................................................

               101    -    151
UN16261        --> TTGAGAAGACTTCCGCTGGCCGACCCAAAATCCAAAATAAAACCTGCCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536215       <-- ..................................................
EY937857       <-- ..................................................
EX748615       <-- ..................................................
EX763534       <-- ..................................................
EV536221       <-- ..................................................
EY949317       <-- ..................................................
EX755355       <-- ..................................................
EY933085       <-- ..................................................
FD542179       <-- ..................................................
EY925275       <-- ..................................................
EX762515       <-- ..................................................
FD941059       <-- ..................................................
EY925319       <-- ..................................................
FD570927       <-- ..................................................
EY934103       --> TTGAGAAGACTTCCGCTGGCCGACCCAAAATCCAAAATAAAACCTGCCCA
FD936790       --> TTGAGAAGACTTCCGCTGGCCGACCCAAAATCCAAAATAAAACCTGCCCA
EX752499       --> ..........ttttttTGGCCGACCCAAAATCCAAAATAAAACCTGCCCA
EV540721       --> ..................................................
FD538312       --> ..................................................
EX759458       --> ..................................................
EY920822       --> ..................................................
EY928652       --> ..................................................
EX767597       --> ..................................................

               151    -    201
UN16261        --> CGACCCACATTCTCAATTTTCTCGGTTTATAAACGCTTTATTAGCCAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536215       <-- ...........CTCAATTTTCTCGGTTTATAAACGCTTTATTAGCCAGCA
EY937857       <-- ..................................................
EX748615       <-- ..................................................
EX763534       <-- ..................................................
EV536221       <-- ..................................................
EY949317       <-- ..................................................
EX755355       <-- ..................................................
EY933085       <-- ..................................................
FD542179       <-- ..................................................
EY925275       <-- ..................................................
EX762515       <-- ..................................................
FD941059       <-- ..................................................
EY925319       <-- ..................................................
FD570927       <-- ..................................................
EY934103       --> CGACCCACATTCTCAATTTTCTCGGTTTATAAACGCTTTATTAGCCAGCA
FD936790       --> CGACCCACATTCTCAATTTTCTCGGTTTATAAACGCTTTATTAGCCAGCA
EX752499       --> CGACCCACATTCTCAATTTTCTCGGTTTATAAACGCTTTATTAGCCAGCA
EV540721       --> ....................CTCGGTTTATAAACGCTTTATTAGCCAGCA
FD538312       --> .......................GGTTTATAAACGCTTTATTAGCCAGCA
EX759458       --> ..........................................cGCCAGCA
EY920822       --> ..................................................
EY928652       --> ..................................................
EX767597       --> ..................................................

               201    -    251
UN16261        --> AACTTGGTTTTTGAGATAATGAAACAAAATCATATCACTGAAACTTCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536215       <-- AACTTGGTTTTTGAGATAATGAAACAAAATCATATCACTGAAACTTCCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY937857       <-- ..aacttgTTTTGAGATAATGAAACAAA-TCATATCACTGAAACTTCAAA  Raphanus sativus cv Early Scarlet Globe
EX748615       <-- ...................................CACTGAAACTTCAAA  Raphanus raphanistrum subsp. maritimus
EX763534       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536221       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY949317       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX755355       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933085       <-- ..................................................  Raphanus sativus var. oleiformis
FD542179       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY925275       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX762515       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD941059       <-- ..................................................  Raphanus sativus var. oleiformis
EY925319       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD570927       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY934103       --> AACTTGGTTTTTGAGATAATGAAACAAAATCATATCACTGAAACTTCAAA  Raphanus sativus cv Early Scarlet Globe
FD936790       --> AACTTGGTTTTTGAGATAATGAAACAAAATCATATCACTGAAACTTCAAA  Raphanus sativus var. oleiformis
EX752499       --> AACTTGGTTTTTGAGATAATGAAACAAAATCATATCACTGAAACTTCAAA  Raphanus raphanistrum subsp. maritimus
EV540721       --> AACTTGGTTTTTGAGATAATGAAACAAAATCATATCACTGAAACTTCCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538312       --> AACTTGGTTTTTGAGATAATGAAACAAAATCATATCACTGAAACTTCCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759458       --> AACTTGGTTTTTGAGATAATGAAACAAAATCATATCACTGAAACTTCCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY920822       --> .......TTTTTGAGATAATGAAACAAAATCATATCACTGAAACTTCAAA  Raphanus raphanistrum subsp. landra
EY928652       --> .................AATGAAACAAAATCATATCACTGAAACTTCAAA  Raphanus sativus var. oleiformis
EX767597       --> ..................gTGAAACAAAATCATATCACTGAAACTTCAAA  Raphanus raphanistrum subsp. raphanistrum (NY)

               251    -    301
UN16261        --> AACATCAGAGATTCTACATTGAGACTTCCCCTGGTCTCTATGAAAAAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536215       <-- AACACCAGAGATTCTACATTGAGACTTCCCCTGGTCTCTATGAAAAAATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY937857       <-- A-CATCAGAGATTCTACAT-GAGACTTCCCCTGGTCTCTATGAAAAA-TC  Raphanus sativus cv Early Scarlet Globe
EX748615       <-- A-CATCAGAGATTCTACATTGAGACTTCCCCTGGTCTCTATGAAAAAATC  Raphanus raphanistrum subsp. maritimus
EX763534       <-- .....CAGAGAT-CTACAT-GAGAC--TCCCTGGTCTCTATGAAAAA-TC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536221       <-- ........AGATTCTACATTGAGACTTCCCCTGGTCTCTATGAAAAAATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY949317       <-- ................CATTGAGACTTCCGCTGGTCTCTATGAAAAA-TC  Raphanus sativus cv Rat-Tail Radish #3870
EX755355       <-- ....................GAGACTTCCC-TGGTCTCTATGAAAAA-TC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933085       <-- ..................................................  Raphanus sativus var. oleiformis
FD542179       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY925275       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX762515       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD941059       <-- ..................................................  Raphanus sativus var. oleiformis
EY925319       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD570927       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY934103       --> AACATCAGAGATTCTACATTGAGACTTCCCCTGGTCTCTATGAAAAAATC  Raphanus sativus cv Early Scarlet Globe
FD936790       --> AACATCAAAAATTCTACATTGAGACTTCCCCTGGTCTCTATGAAAAAATC  Raphanus sativus var. oleiformis
EX752499       --> AACATCAGAGATTCTACATTGAGACTTCCCCTGGTCTCTATGAAAAAATC  Raphanus raphanistrum subsp. maritimus
EV540721       --> AACACCAGAGATTCTACATTGAGACTTCCCCTGGTCTCTATGAAAAAATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538312       --> AACACCAGAGATTCTACATTGAGACTTCCCCTGGTCTCTATGAAAAAATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759458       --> AACACCAGAGATTCTACATTGAGACTTCCCCTGGTCTCTATGAAAAAATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY920822       --> AACATCAGAAATTCTACATTGAGACTTCCCCTGGTCTCTATGAAAAAATC  Raphanus raphanistrum subsp. landra
EY928652       --> AACATCAGAGATTCTACATTGAGACTTCCCCTGGTCTCTATGAAAAAATC  Raphanus sativus var. oleiformis
EX767597       --> AACATCAGAGATTCTACATTGAGACTTCCCCTGGTCTCTATGAAAAAATC  Raphanus raphanistrum subsp. raphanistrum (NY)

               301    -    351
UN16261        --> ACTGAAAAGGAATCTACTCGTTCTTCACATCACGCTCAGTAGGAGGCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536215       <-- ACTGAAAAGGAATCTACTCGTTCTTCACATCACGCTCAGTAGGc......  Raphanus raphanistrum subsp. raphanistrum (MS)
EY937857       <-- ACTGAAACGGAATTCACTCGTTCTTCACATCACACTCAGTAGGAGGCTCA  Raphanus sativus cv Early Scarlet Globe
EX748615       <-- ACTGAAAAGGAATCTACTCGTTCTTCACATCACGCTCAGTAGGAGGCTCA  Raphanus raphanistrum subsp. maritimus
EX763534       <-- ACTGAAAAGGAATCTACTCGT-CTTCACATCACGCTCAGTAGGAGGCTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536221       <-- ACTGAAAAGGAATCTACTCGTTCTTCACATCACGCTCAGTAGGAGGCTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY949317       <-- ACTGAAACGGAATTCACTC-TTCTTCACATCACGCTCAGTAGGAGGCTCA  Raphanus sativus cv Rat-Tail Radish #3870
EX755355       <-- ACTGAAAAGGAATCTACTCGTTCTTCACATCACGCTCAGTAGGAGGCTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933085       <-- ..........aattcACTCGT-CTTCACATCACACTCAGTAGGAG-CTCA  Raphanus sativus var. oleiformis
FD542179       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY925275       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX762515       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD941059       <-- ..................................................  Raphanus sativus var. oleiformis
EY925319       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD570927       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY934103       --> ACTGAAACGGAATTCACTCGTTCTTCACATCACACTCAGTAGGAGGCTCA  Raphanus sativus cv Early Scarlet Globe
FD936790       --> ACTGAAACGGAATTCACTCGTTCTTCACATCACACTCAGTAGGAGGCTCA  Raphanus sativus var. oleiformis
EX752499       --> ACTGAAAAGGAATCTACTCGTTCTTCACATCACGCTCAGTAGGAGGCTCA  Raphanus raphanistrum subsp. maritimus
EV540721       --> ACTGAAAAGGAATCTACTCGTTCTTCACATCACGCTCAGTAGGAGGCTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538312       --> ACTGAAAAGGAATCTACTCGTTCTTCACATCACGCTCAGTAGGAGGCTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759458       --> ACTGAAAAGGAATCTACTCGTTCTTCACATCACGCTCAGTAGGAGGCTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY920822       --> ACTGAAAAGGAATCTACTCGTTCTTCACATCACGCTCAGTAGGAGGCTCA  Raphanus raphanistrum subsp. landra
EY928652       --> ACTGAAACGGAATTCACTCGTTCTTCACATCACACTCAGTAGGAGGCTCA  Raphanus sativus var. oleiformis
EX767597       --> ACTGAAAAGGAATCTACTCGTTCTTCACATCACGCTCAGTAGGAGGCTCA  Raphanus raphanistrum subsp. raphanistrum (NY)

               351    -    401
UN16261        --> TCATTCTTAGACACAACGGCCGATTCTTGCTTGGTTACATGAGCGTCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536215       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY937857       <-- TCATTCTTAGACACAACGGCCGATTCTTGCTTGGTTACATGAGCGTCTTT  Raphanus sativus cv Early Scarlet Globe
EX748615       <-- TCATTCTTAGACACAACGGCCGATTCTTGCTTGGTTACATGAGCGTCTTT  Raphanus raphanistrum subsp. maritimus
EX763534       <-- TCAT-CTTAGACACAACGGCCGATTCTTGCTTGGTTACATGAGCGTCTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536221       <-- TCATTCTTATCCACAACGGCCGATTCTTGCTTGGTTACATGAGCGTCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY949317       <-- TCA---TTATCCACAACGGCCGATTCTTGCTTGGTTACATGAGCGTCTTT  Raphanus sativus cv Rat-Tail Radish #3870
EX755355       <-- TCATTCTTATCCACAACGGCCGATTCTTGCTTGGTTACATGAGCGTCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933085       <-- TCAT-CTTAGACACAACGGCCGATTCTTGCTTGGTTACATGAGCGTCTTT  Raphanus sativus var. oleiformis
FD542179       <-- ...........CACAACGGCCGATTCTTGCTTGGTTACATAAGCGTCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY925275       <-- ...................................TACATGAGCGTCTTT  Raphanus raphanistrum subsp. landra
EX762515       <-- ...............................................TTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD941059       <-- ..................................................  Raphanus sativus var. oleiformis
EY925319       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD570927       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY934103       --> TCATTCTTAGACACAACGGCCGATTCTTGCTTGGTTACATGAGCGTCTTT  Raphanus sativus cv Early Scarlet Globe
FD936790       --> TCATTCTTAGACACAACGGCCGATTCTTGCTTGGTTACATGAGCGTCTTT  Raphanus sativus var. oleiformis
EX752499       --> TCATTCTTAGACACAACGGCCGATTCTTGCTTGGTTACATGAGCGTCTTT  Raphanus raphanistrum subsp. maritimus
EV540721       --> TCATTCTTATCCACAACGGCCGATTCTTGCTTGGTTACATGAGCGTCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538312       --> TCATTCTTGTCCACAACGGCCGATTCTTGCTTGGTTACATAAGCGTCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759458       --> TCATTCTTATCCACAACGGCCGATTCTTGCTTGGTTACATGAGCGTCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY920822       --> TCATTCTTAGACACTACGGCCGATTCTTGCTTGGTTACATGAGCGTCTTT  Raphanus raphanistrum subsp. landra
EY928652       --> TCATTCTTAGACACAACGGCCGATTCTTGCTTGGTTACATGAGCGTCTTT  Raphanus sativus var. oleiformis
EX767597       --> TCATTCTTAGACACAACGGCCGATTCTTGCTTGGTTACATGAGCGTCTTT  Raphanus raphanistrum subsp. raphanistrum (NY)

               401    -    451
UN16261        --> CTCACCAGTCTCTGCGGGTTCAGACGCAGATGGGGTTTCTTCGGCTTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536215       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY937857       <-- CTCACCAGTCTCTGCGGGTTCAGACGCAGATGGGGTTTCTTCGGCTTCTG  Raphanus sativus cv Early Scarlet Globe
EX748615       <-- CTCACCAGTCTCTGCGGGTTCAGACGCAGATGGGGTTTCTTCGGCTTCTG  Raphanus raphanistrum subsp. maritimus
EX763534       <-- CTCACCAGTCTCTGCGGGTTCAGACGCAGATGGGGTTTCTTCGGCTTCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536221       <-- CTCACCAGTCTCTGCGGGTTCAGACGCAGATGGGGTTTTTTCGGCTTCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY949317       <-- CTCACCAGTCTCTGCGGGTTCAGACGCAGATGGGGTT---TCGGCTTCTG  Raphanus sativus cv Rat-Tail Radish #3870
EX755355       <-- CTCACCAGTCTCTGCGGGTTCAGACGCAGATGGGGTTTTTTCGGCTTCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933085       <-- CTCACCAGTCTCTGCGGGTTCAGACGCAGATGGGGTTTCTTCGGCTTCTG  Raphanus sativus var. oleiformis
FD542179       <-- CTCACCAGTCTCTGCGGGTTCAGACGCAGATGGGGTTTTTTCGGCTTCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY925275       <-- CTCACCAGTCTCTGCGGGTTCAGACGCAGATGGGGTTTCTTCGGCTTCTG  Raphanus raphanistrum subsp. landra
EX762515       <-- TTCACCAGTCTCTGCGGGTTCAGACGCAGATGGGGTTTCTTCGGCTTCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD941059       <-- .....................AGACGCAGATGGGGTTTCTTCGGCTTCTG  Raphanus sativus var. oleiformis
EY925319       <-- ......................................CTTCGGCTTCTG  Raphanus raphanistrum subsp. landra
FD570927       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY934103       --> CTCACCAGTCTCTGCGGGTTCAGACGCAAATGGGGTTTCTTCGGCTTCTG  Raphanus sativus cv Early Scarlet Globe
FD936790       --> CTCACCAGTCTCTGCGGGTTCAGACGCAGATGGGGTTTCTTCGGCTTCTG  Raphanus sativus var. oleiformis
EX752499       --> CTCACCAGTCTCTGCGGGTTCAGACGCAGATGGGGTTTCTTCGGCTTCTG  Raphanus raphanistrum subsp. maritimus
EV540721       --> CTCACCAGTCTCTGCGGGTTCAGACGCAGATGGGGTTTTTTCGGCTTCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538312       --> CTCACCAGTCTCTGCGGGTTCAGACGCAGATGGGGTTTTTTCGGCTTCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759458       --> CTCACCAGTCTCTGCGGGTTCAGACGCAGATGGGGTTTTTTCGGCTTCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY920822       --> CTCACCAGTCTCTGCGGGTTCAGACGCAGATGGGGTTTCTTCGGCTTCTG  Raphanus raphanistrum subsp. landra
EY928652       --> CTCACCAGTCTCTGCGGGTTCAGACGCAGATGGGGTTTCTTCGGCTTCTG  Raphanus sativus var. oleiformis
EX767597       --> CTCACCAGTCTCTGCGGGTTCAGACGCAGATGGGGTTTCTTCGGCTTCTG  Raphanus raphanistrum subsp. raphanistrum (NY)

               451    -    501
UN16261        --> AACCGGTCACTTTGACGGTGCCAACGGTAGCATACTTGCTCTTGAACTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536215       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY937857       <-- AACCGGTCACTTTGACGGTGCCAACGGTAGCATACTTGCTCTTGAACTTG  Raphanus sativus cv Early Scarlet Globe
EX748615       <-- AACCGGTCACTTTGACGGTGCCAACGGTAGCATACTTGCTCTTGAACTTG  Raphanus raphanistrum subsp. maritimus
EX763534       <-- AACCGGTCACTTTGACGGTGCCAACGGTAGCATACTTGCTCTTGAACTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536221       <-- AACCGGTCACTTTGACGGTGCCAACAGTAGCATACTTGCTCTTGAACTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY949317       <-- AACCGGTCACTTTGACGGTGCCAACGGTAGCATACTTGCTCTTGAACTTG  Raphanus sativus cv Rat-Tail Radish #3870
EX755355       <-- AACCGGTCACTTTGACGGTGCCAACAGTAGCATACTTGCTCTTGAACTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933085       <-- AACCGGTCACTTTGACGGTGCCAACGGTAGCATACTTGCTCTTGAACTTG  Raphanus sativus var. oleiformis
FD542179       <-- AACCGGTCACTTTGACGGTGCCAACAGTAGCATACTTGCTCTTGAACTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY925275       <-- AACCGGTCACTTTGACGGTGCCAACGGTAGCATACTTGCTCTTGAACTTG  Raphanus raphanistrum subsp. landra
EX762515       <-- AACCGGTCACTTTGACGGTGCCAACGGTAGCATACTTGCTCTTGAACTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD941059       <-- AACCGGTCACTTTGACGGTGCCAACGGTAGCATACTTGCTCTTGAACTTG  Raphanus sativus var. oleiformis
EY925319       <-- AACCGGTCACTTTGACGGTGCCAACGGTAGCATACTTGCTCTTGAACTTG  Raphanus raphanistrum subsp. landra
FD570927       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY934103       --> AACCGGTCACTTTGACGGTGCCAACGGTAGCATACTTGCTCTTGAACTTG  Raphanus sativus cv Early Scarlet Globe
FD936790       --> AACCGGTCACTTTGACGGTGCCAACGGTAGCATACTTGCTCTTGAACTTG  Raphanus sativus var. oleiformis
EX752499       --> AACCGGTCACTTTGACGGTGCCAACGGTAGCATACTTGCTCTTGAACTTG  Raphanus raphanistrum subsp. maritimus
EV540721       --> AACCGGTCACTTTGACGGTGCCAACAGTAGCATACTTGCTCTTGAACTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538312       --> AACCGGTCACTTTGACGGTGCCAACAGTAGCATACTTGCTCTTGAACTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759458       --> AACCGGTCACTTTGACGGTGCCAACAGTAGCATACTTGCTCTTGAACTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY920822       --> AACCGGTCACTTTGACGGTGCCAACGGTAGCATACTTGCTCTTGAACTTG  Raphanus raphanistrum subsp. landra
EY928652       --> AACCGGTCACTTTGACGGTGCCAACGGTAGCATACTTGCTCTTGAACTTG  Raphanus sativus var. oleiformis
EX767597       --> AACCGGTCACTTTGACGGTGCCAACGGTAGCATACTTGCTCTTGAACTTG  Raphanus raphanistrum subsp. raphanistrum (NY)

               501    -    551
UN16261        --> TACTCCCAGTCCTGAAGAGCTTCTAGCTCAAA-GGGACCAAGACCAGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536215       <-- ..................................................
EY937857       <-- TACTCCCAGTCCTGAAGAGCTTCTAGCTCAAA-GGGACCAAGACCAGAGA
EX748615       <-- TACTCCCAGTCCTGAAGAGCTTCTAGCTCAAA-GGGACCAAGACTAGAGA
EX763534       <-- TACTCCCAGTCCTGAAGAGCTTCTAGCTCAAAAGGGACCAAGACCAGAGA
EV536221       <-- TACTCCCAGTCCTGAAGAGCTTCTAGCTCAAA-GGGACCAAGACCAGAGA
EY949317       <-- TACTTCCAGTCCTGAAGAGCTTCTAGCTCAAA-GGGACCAAGACCAGAGA
EX755355       <-- TACTCCCAGTCCTGAAGAGCTTCTAGCTCAAA-GGGACCAAGACCAGAGA
EY933085       <-- TACTCCCAGTCCTGAAGAGCTTCTAGCTCAAA-GGGACCAAGACCAGAGA
FD542179       <-- TACTCCCAGTCCTGAAGAGCTTCTAGCTCAAA-GGGACCAAGACCAGAGA
EY925275       <-- TACTCCCAGTCCTGAAGAGCTTCTAGCTCAAA-GGGACCAAGACCAGAGA
EX762515       <-- TACTCCCAGTCCTGAAGAGCTTCTAGCTCAAA-GGGACCAAGACCAGAGA
FD941059       <-- TACTCCCAGTCCTGAAGAGCTTCTAGCTCAAA-GGGACCAAGACCAGAGA
EY925319       <-- TACTCCCAGTCCTGAAGAGCTTCTAGCTCAAA-GGGACCAAGACCAGAGA
FD570927       <-- ..................................................
EY934103       --> TACTCCCAGTCCTGAAGAGCTTCTAGCTCAAA-GGGACCAAGACCAGAGA
FD936790       --> TACTCCCAGTCCTGAAGAGCTTCTAGCTCAAA-GGGACCAAGA.......
EX752499       --> TACTCCCAGTCCTGAAGAGCTTCTAGCTCAAA-GGGACCAAGACTAGAGA
EV540721       --> TACTCCCAGTCCTGAAGAGCTTCTAGCTCAAA-GGGACCAAGACCAGAGA
FD538312       --> TACTCCCAGTCCTGAAGAGCTTCTAGCTCAAA-GGGACCAAGACCAGAGA
EX759458       --> TACTCCCAGTCCTGAAGAGCTTCTAGCTCAAA-GGGACCAAGACCAGAGA
EY920822       --> TACTCCCAGTCCTGAAGAGCTTCTAGCTCAAA-GGGACCAAGACCAGAGA
EY928652       --> TACTCCCAGTCCTGAAGAGCTTCTAGCTCAAA-GGGACCAAGACCAGAGA
EX767597       --> TACTCCCAGTCCTGAAGAGCTTCTAGCTCAAA-GGGACCAAGACCAGAGA

               551    -    601
UN16261        --> TATCCCAA-GTCAAA-TCTTTCTCCTCAAAAGACATCTTTGCAAGAGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536215       <-- ..................................................
EY937857       <-- TATCCCAA-GTCAAA-TCTTTCTCCTCAAAAGACATCTTTGCAAGAGCTC
EX748615       <-- TATACCAA-GTCAAA-TCTTTCTCCTCAAAAGACATCTTTGCAAGAGCTC
EX763534       <-- TATCCCAAAGTCAAAATCTTTCTCCTCAAAAGACATCTTTGCAAGAGCTC
EV536221       <-- TATCCCAA-GTCAAA-TCTTTCTCCTCAAAAGACATCTTTGCAAGAGCTC
EY949317       <-- TATCCCAA-GTCGAA-TCTTTCTCCTCAAAAGACATCTTTGCAAGAGCTC
EX755355       <-- TATCCCAA-GTCAAA-TCTTTCTCCTCAAAAGACATCTTTGCAAGAGCTC
EY933085       <-- TATCCCAA-GTCAAA-TCTTTCTCCTCAAAAGACATCTTTGCAAGAGCTC
FD542179       <-- TATCCCAA-GTCAAA-TCTTTCTCCTCAAAAGACATCTTTGCAAGAGCTC
EY925275       <-- TATCCCAA-GTCAAA-TCTTTCTCCTCAAAAGACATCTTTGCAAGAGCTC
EX762515       <-- TATCCCAA-GTCAAA-TCTTTCTCCTCAAAAGACATCTTTGCAAGAGCTC
FD941059       <-- TATCCCAA-GTCAAA-TCTTTCTCCTCAAAAGACATCTTTGCAAGAGCTC
EY925319       <-- TATCCCAA-GTCAAA-TCTTTCTCCTCAAAAGACATCTTTGCAAGAGCTC
FD570927       <-- ..................................................
EY934103       --> TATCCCAA-GTCAAA-TCTTTCTCCTCAAAAGACATCTTTGCAAGAGCTC
FD936790       --> ..................................................
EX752499       --> TATACCAA-GTCAAA-TCTTTCTCCTCAAAAGACATCTTTGCAAGAGCTC
EV540721       --> TATCCCAA-GTCAAA-TCTTTCTCCTCAAAAGACATCTTTGCAAGAGCTC
FD538312       --> TATCCCAA-GTCAAA-TCTTTCTCCTCAAAAGACATCTTTGCAAGAGCTC
EX759458       --> TATCCCAA-GTCAAA-TCTTTCTCCTCAAAAGACATCTTTGCAAGAGCTC
EY920822       --> TATCCCAA-GTCAAA-TCTTTCTCCTCAAAAGACATCTTTGCAAGAGCTC
EY928652       --> TATCCCAA-GTCAAA-TCTTTCTCCTCAAAAGACATCTTTGCAAGAGCTC
EX767597       --> TATCCCAA-GTCAAA-TCTTTCTCCTCAAAAGACATCTTTGCAAGAGCTC

               601    -    651
UN16261        --> GGCTTGCGTCTTTCCCTGCAAACAAAGCATACGGTCCTCCTGGTCCATAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536215       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY937857       <-- GGCTTGCGTCTTTCCCTGCAAACAAAGCATACAGTCCTCCGGGTCCATAG  Raphanus sativus cv Early Scarlet Globe
EX748615       <-- GGCTTGCGTCTTTCCCTGCAAACAAAGCATACGGTCCTCCTGGTCCATAG  Raphanus raphanistrum subsp. maritimus
EX763534       <-- GGCTTGCGTCTTTCCCTGCAAACAAAGCATACGGTCCTCCTGGTCCATAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536221       <-- GGCTTGCGTCTTTCCCTGCAAACAAAGCATACGGTCCTCCTGGTCCATAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY949317       <-- GGCTTGCGTCTTTCCCTGCAAACAAAGCATACGGTCCTCCGGGTCCATAG  Raphanus sativus cv Rat-Tail Radish #3870
EX755355       <-- GGCTTGCGTCTTTCCCTGCAAACAAAGCATACGGTCCTCCTGGTCCATAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933085       <-- GGCTTGCGTCTTTCCCTGCAAACAAAGCATACGGTCCTCCGGGTCCATAG  Raphanus sativus var. oleiformis
FD542179       <-- GGCTTGCGTCTTTCCCTGCAAACAAAGCATACGGTCCTCCTGGTCCATAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY925275       <-- GGCTTGCGTCTTTCCCTGCAAACAAAGCATACGGTCCTCCTGGTCCATAG  Raphanus raphanistrum subsp. landra
EX762515       <-- GGCTTGCGTCTTTCCCTGCAAACAAAGCATACGGTCCTCCGGGTCCATAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD941059       <-- GGCTTGCGTCTTTCCCTGCAAACAAAGCATACGGTCCTCCGGGTCCATAG  Raphanus sativus var. oleiformis
EY925319       <-- GGCTTGCGTCTTTCCCTGCAAACAAAGCATACGGTCCTCCTGGTCCATAG  Raphanus raphanistrum subsp. landra
FD570927       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY934103       --> GGCTTGCGTCTTTCCCTGCAAACAAAGCATACAGTCCTCCGGGTCCATAG  Raphanus sativus cv Early Scarlet Globe
FD936790       --> ..................................................  Raphanus sativus var. oleiformis
EX752499       --> GGCTTGCGTCTTTCCCTGCAAACAAAGCATACGGTCCTCCTGGTCCATAA  Raphanus raphanistrum subsp. maritimus
EV540721       --> GGCTTGCGTCTTTCCCTGCAAACAAAGCATACGGTCCTCCTGGTCCATAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538312       --> GGCTTGCGTCTTTCCCTGCAAACAAAGCATACGGTCCTCCTGGTCCATAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759458       --> GGCTTGCGTCTTTCCCTGCAAACAAAGCATACGGTCCTCCTGGTCCATAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY920822       --> GGCTTGCGTCTTTCCCTGCAAACAAAGCATACGGTCCTCCTGGTCCATAG  Raphanus raphanistrum subsp. landra
EY928652       --> GGCTTGCGTCTTTCCCTGCAAACAAAGCATACGGTCCTCCGGGTCCATAG  Raphanus sativus var. oleiformis
EX767597       --> GGCTTGCGTCTTTCCCTGCAAACAAAGCATACGGTCCTCCTGGTCCATAG  Raphanus raphanistrum subsp. raphanistrum (NY)

               651    -    701
UN16261        --> AACATCCTGCTTTGAGTTACATCATAGATCTGATGTTTGATGGCCATAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536215       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY937857       <-- AACATCCTGCTTTGAGTTACATCATAGATCTGATGTTTGATGGCCATAAG  Raphanus sativus cv Early Scarlet Globe
EX748615       <-- AACATCCTGCTTTGAGTAACATCATAGATCTGATGTTTGATGGCCATAAG  Raphanus raphanistrum subsp. maritimus
EX763534       <-- AACATCCTGCTTTGAGTAACATCATAGATCTGATGTTTGATGGCCATAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536221       <-- AACATCCTGCTTTGAGTTACATCATAGATCTGATGTTTGATGGCCATAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY949317       <-- AACATCCTGCTTTGAGTTACATCATAGATCTGATATTTGATGGCCATAAG  Raphanus sativus cv Rat-Tail Radish #3870
EX755355       <-- AACATCCTGCTTTGAGTTACATCATAGATCTGATGTTTGATGGCTATAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933085       <-- AACATCCTGCTTTGAGTTACATCATAGATCTGATGTTTGATGGCCATAAG  Raphanus sativus var. oleiformis
FD542179       <-- AACATCCTGCTTTGAGTTACATCATAGATCTGATGTTTGATGGCCATAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY925275       <-- AACATCCTGCTTTGAGTAACATCATAGATCTGATGTTTGATGGCCATAAG  Raphanus raphanistrum subsp. landra
EX762515       <-- AACATCCTGCTTTGAGTTACATCATAGATCTGATGTTTGATGGCCATAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD941059       <-- AACATCCTGCTTTGAGTTACATCATAGATCTGATGTTTGATGGCCATAAG  Raphanus sativus var. oleiformis
EY925319       <-- AACATCCTGCTTTGAGTAACATCATAGATCTGATGTTTGATGGCCATAAG  Raphanus raphanistrum subsp. landra
FD570927       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY934103       --> AACATCCTGCTTTGAGTTACATCATAGATCTGATGTTTGATGGCCATAAG  Raphanus sativus cv Early Scarlet Globe
FD936790       --> ..................................................  Raphanus sativus var. oleiformis
EX752499       --> AACATCCTGCTTTGAGTAACATCATAGATCTGATGTTTGATGGCCATAAG  Raphanus raphanistrum subsp. maritimus
EV540721       --> AACATCCTGCTTTGAGTTACATCATAGATCTGATGTTTGATGGCCATAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538312       --> AACATCCTGCTTTGAGTTACATCATAAATCTGATGTTTGATGGCCATAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759458       --> AACATCCTGCTTTGAGTTACATCATAGATCTGATGTTTGATGGCTATAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY920822       --> AACATCCTGCTTTGAGTAACATCATAGATCTGATGTTTGATGGCCATAAG  Raphanus raphanistrum subsp. landra
EY928652       --> AACATCCTGCTTTGAGTTACATCATAGATCTGATGTTTGATGGCCATAAG  Raphanus sativus var. oleiformis
EX767597       --> AACATCCTGCTTTGAGTAACATCATAGATCTGATGTTTGATGGCCATAAG  Raphanus raphanistrum subsp. raphanistrum (NY)

               701    -    751
UN16261        --> AAGGGGCTTTTGAGGATCGGAGCCATCGTACTGCTTAAGCTCCTCCTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536215       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY937857       <-- AAGGGACTTTTGAGGGTCGGAGCCATCGTACTGCTTAAGCTCCTCCTCTG  Raphanus sativus cv Early Scarlet Globe
EX748615       <-- AAGGGGCTTTTGAGGATCGGAGCCATCGTACTGCTTAAGCTCATCCTCTG  Raphanus raphanistrum subsp. maritimus
EX763534       <-- AAGGGGCTTTTGAGGATCGGAGCCATCGTACTGCTTAAGCTCATCCTCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536221       <-- AAGGGGCTTTTGAGGATCGGAGCCATCGTACTGCTTAAGCTCCGCCTCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY949317       <-- AAGGGGCTTTTGAGGGTCGGAGCCGTCGTACTGCTTAAGCTCCTCCTCTG  Raphanus sativus cv Rat-Tail Radish #3870
EX755355       <-- AAGGGGCTTTTGAGGATCGGAGCCATCGTACTGCTTAAGCTCCGCCTCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933085       <-- AAGGGGCTTTTGAGGGTCGGAGCCATCGTACTGCTTAAGCTCCTCCTCTG  Raphanus sativus var. oleiformis
FD542179       <-- AAGGGGCTTTTGAGGATCGGAGCCATCGTACTGCTTAAGCTCCGCCTCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY925275       <-- AAGGAGCTTTTGAGGATCGGAGCCATCGTACTGCTTAAGCTCATCCTCTG  Raphanus raphanistrum subsp. landra
EX762515       <-- AAGGGGCTTTTGAGGGTCGGAGCCATCGTACTGCTTAAGCTCCTCCTCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD941059       <-- AAGGGGCTTTTGAGGGTCGGAGCCATCGTACTGCTTAAGCTCCTCCTCTG  Raphanus sativus var. oleiformis
EY925319       <-- AAGGGGCTTTTGAGGATCGGAGCCATCGTACTGCTTAAGCTCATCCTCTG  Raphanus raphanistrum subsp. landra
FD570927       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY934103       --> AAGGGACTTTTGAGGGTCGGAGCCATCGTACTGCTTAAGCTCCTCCTCTG  Raphanus sativus cv Early Scarlet Globe
FD936790       --> ..................................................  Raphanus sativus var. oleiformis
EX752499       --> AAGGGGCTTTTGAGGATCGGAGCCATCGTACTGCTTAAGCTCATCCTCTG  Raphanus raphanistrum subsp. maritimus
EV540721       --> AAGGGGCTTTTGAGGATCGGAGCCATCGTACTGCTTAAGCTCCGCCTCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538312       --> AAGGGGCTTTTGAGGATCGGAGCCATCGTACTGCTTAAGCTCCGCCTCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759458       --> AAGGGGCTTTTGAGGATCGGAGCCATCGTACTGCTTAAGCTCCGCCTCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY920822       --> AAGGGGCTTTTGAGGATCGGAGCCATCGTACTGCTTAAGCTCATCC....  Raphanus raphanistrum subsp. landra
EY928652       --> AAGGGGCTTTTGAGGGTCGGAGCCATCGTACTGCTTAAGCTCCTCCTCTG  Raphanus sativus var. oleiformis
EX767597       --> AAGGGGCTTTTGAGGATCGGAGCCATCGTACTGCTTAAGCTCATCCTCTG  Raphanus raphanistrum subsp. raphanistrum (NY)

               751    -    801
UN16261        --> TGATCTCGCCGACCTGAACAGGCTGAGGAATCGGTGGTTCTTCCTCTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536215       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY937857       <-- TGATCTCGCCGACCTGAACAAGCTGAGGAATCGGTGGTTCTTCCTCTG-A  Raphanus sativus cv Early Scarlet Globe
EX748615       <-- TGATCTCGCCGACCTGAACAGGCTGAGGAATCGGTGGTTCTTCCTCTGCA  Raphanus raphanistrum subsp. maritimus
EX763534       <-- TGATCTCGCCGACCTGAACAGGCTGAGGAATCGGTGGTTCTTCCTCTGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536221       <-- TGATCTCGCCGACCTGAACAGGCTGAGGGATCGGTGGTTCTTCCTCTGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY949317       <-- TGATCTCGCCGACCTGAACAGGCTGAGGAATCGGTGGTTCCTCCTCTGCA  Raphanus sativus cv Rat-Tail Radish #3870
EX755355       <-- TGATCTCGCCGACCTGAACAGGCTGAGGGATCGGTGGTTCTTCCTCTGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933085       <-- TGATCTCGCCGACCTGAACAGGCTGAGGAATCGGTGGTTCTTCCTCTGCA  Raphanus sativus var. oleiformis
FD542179       <-- TGATCTCGCCGACCTGAACAGGCTGAGGGATCGGTGGTTCTTCCTCTGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY925275       <-- TGATCTCGCCGACCTGAACAGGCTGAGGAATCGGTGGTTCTTCCTCTGCA  Raphanus raphanistrum subsp. landra
EX762515       <-- TGATCTCGCCGACCTGAACAGGCTGAGGAATCGGTGGTTCTTCCTCTGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD941059       <-- TGATCTCGCCGACCTGAACAGGCTGAGGAATCGGTGGTTCTTCCTCTGCA  Raphanus sativus var. oleiformis
EY925319       <-- TGATCTCGCCGACCTGAACAGGCTGAGGAATCGGTGGTTCTTCCTCTGCA  Raphanus raphanistrum subsp. landra
FD570927       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY934103       --> TGATCTCGCCGACCTGAACAagc...........................  Raphanus sativus cv Early Scarlet Globe
FD936790       --> ..................................................  Raphanus sativus var. oleiformis
EX752499       --> TGATCTCGCCGACCTGAACAGGCTGAGGAATCGGTGGTTCTTCCTCTGCA  Raphanus raphanistrum subsp. maritimus
EV540721       --> TGATCTCGCCGACCTGAACAGGCTGAGGGATCGGTGGTTCTTCCTCTGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538312       --> TGATCTCGCCGACCTGAACAGGCTGAGGGATCGGTGGTTCTTCCTCTGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759458       --> TGATCTCGCCGACCTGAACAGGCTGAGGGATCGGTGGTTCTTCCTCTGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY920822       --> ..................................................  Raphanus raphanistrum subsp. landra
EY928652       --> TGATCTCGCCGACCTGAACAGGCTGAGGAATCGGTGGTTCTTCCTCTGCA  Raphanus sativus var. oleiformis
EX767597       --> TGATCTCGCCGACCTGAACAGGCTGAGGAATCGGTGGTTCTTCCTCTGCA  Raphanus raphanistrum subsp. raphanistrum (NY)

               801    -    851
UN16261        --> GCTGACGATCTAGCCCTCTGATGTCGGCGAACATCATCGAAAGGCGAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536215       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY937857       <-- GCTGACGATCTAGCCCTCTGATGTCGGCGAACATCATCGAAAGGCGAAGC  Raphanus sativus cv Early Scarlet Globe
EX748615       <-- GCTGACGATCTAGCCCTCTGATGTCGGCGAACATCATCGAAAGGCGAAGC  Raphanus raphanistrum subsp. maritimus
EX763534       <-- GCTGACGATCTAGCCCTCTGATGTCGGCGAACATCATCGAAAGGCGAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536221       <-- GCTGACGATCTAGCCCTCTGATGTCGGCGAACATCATCGAAAGGCGAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY949317       <-- GCTGACGATCTAGCCCTCTGATGTCGGCGAACATCATCGAAAGGCGAAGC  Raphanus sativus cv Rat-Tail Radish #3870
EX755355       <-- GCTGACGATCTAGCCCTCTGATGTCGGCGAACATCATCGAAAGGCGAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933085       <-- GCTGACGATCTAGCCCTCTGATGTCGGCGAACATCATCGAAAGGCGAAGC  Raphanus sativus var. oleiformis
FD542179       <-- GCTGACGATCTAGCCCTCTGATGTCGGCGAACATCATCGAAAGGCGAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY925275       <-- GCTGACGATCTAGCCCTCTGATGTCGGCGAACATCATCGAAAGGCGAAGC  Raphanus raphanistrum subsp. landra
EX762515       <-- GCTGACGATCTAGCCCTCTGATGTCGGCGAACATCATCGAAAGGCGAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD941059       <-- GCTGACGATCTAGCCCTCTGATGTCGGCGAACATCAACGAAAGGCGAAGC  Raphanus sativus var. oleiformis
EY925319       <-- GCTGACGATCTAGCCCTCTGATGTCGGCGAACATCATCGAAAGGCGAAGC  Raphanus raphanistrum subsp. landra
FD570927       <-- ...............................CATCATCGAAAGGC-AAGC  Raphanus sativus cv Early Scarlet Globe
EY934103       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD936790       --> ..................................................  Raphanus sativus var. oleiformis
EX752499       --> GCTGACGATCTAGCCCTCTGATGTCGGCGAACATCATCGAAAGGCGA...  Raphanus raphanistrum subsp. maritimus
EV540721       --> GCTGACGATCTAGCCCTCTGATGTCGGCGAACATCATCGAAAGGCGAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538312       --> GCTGACGA..........................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759458       --> GCTGACGATCTAGCCCTCTGATGTCGGCGAACATCATCGAAAGGCGAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY920822       --> ..................................................  Raphanus raphanistrum subsp. landra
EY928652       --> GCTGACGATCTAGCCCTCTGATGTCGGCGAACATCATCGAAAGGCGAAGC  Raphanus sativus var. oleiformis
EX767597       --> GCTGACGATCTAGCCCTCTGATGTCGGCGAACATCATCGAAAGGCGAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)

               851    -    901
UN16261        --> AAACCAGCCTGAGACGACTTGGTAAATGGCGAAGGCGAGAGCGAGGGCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536215       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY937857       <-- AAACCAGCCTGAGACGACTTGGTAAATGGCGAAGGCGAGAGCGAGGGCGG  Raphanus sativus cv Early Scarlet Globe
EX748615       <-- AAACCAGCCTGAGACGACTTGGTAAGTGGCGAAGGCGAGAGCGAGGGCGG  Raphanus raphanistrum subsp. maritimus
EX763534       <-- AAACCAGCCTGAGACGACTTGGTAAATGGCGAAGGCGAGAGCGAGGGCGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536221       <-- GAACCAGCCTGAGACGACTTGGTAAATGGCGAAGGCGAGAGCGAGGGCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY949317       <-- AAACCAGCCTGAGACGACTTGGTAAATGGCGAAGGCGAGAGCGAGGGCGG  Raphanus sativus cv Rat-Tail Radish #3870
EX755355       <-- GAACCAGCCTGAGACGACTTGGTAAATGGCGAAGGCGAGAGCGAGGGCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933085       <-- AAACCAGCCTGAGACGACTTGGTAAATGGCGAAGGCGAGAGCGAGGGCGG  Raphanus sativus var. oleiformis
FD542179       <-- GAACCAGCCTGAGACGACTTGGTAAATGGCGAAGGCGAGAGCGAGGGCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY925275       <-- AAACCAGCCTGAGACGACTTGGTAAATGGCGAAGGCGAGAGCGAGGGCGG  Raphanus raphanistrum subsp. landra
EX762515       <-- AAACCAGCCTGAGACGACTTGGTAAATGGCGAAGGCGAGAGCGAGGGCGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD941059       <-- AAACCAGCCTGAGACGACTTGGTAAATGGCGAAGGCGAGAGCGAGGGCGG  Raphanus sativus var. oleiformis
EY925319       <-- AAACCAGCCTGA-ACGACTTGGTAAATGGCGAAGGCGAGAGCGAGGGCGG  Raphanus raphanistrum subsp. landra
FD570927       <-- AAACCAGCTTGAGACGACTTGGTAAATGGCGAAGGCGAGAGCGAGGGCGG  Raphanus sativus cv Early Scarlet Globe
EY934103       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD936790       --> ..................................................  Raphanus sativus var. oleiformis
EX752499       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV540721       --> GAACCAGCCTGAGACGACTTGGTAAATGGCGAAGGCGAGAGCGAGGGCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538312       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759458       --> GAACCAGCCTGAGACGACTTGGTAAATGGCGAAGGCGAGAGCGAGGGCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY920822       --> ..................................................  Raphanus raphanistrum subsp. landra
EY928652       --> AAACCAGCCTGAGACGACTTGGTAAATGGCGAAGGCGAGAGCGAGGGCGG  Raphanus sativus var. oleiformis
EX767597       --> AAACCAGCCTGAGACGACTTGGTAAATGGCGAAGGCGAGAGCGAGGGCGG  Raphanus raphanistrum subsp. raphanistrum (NY)

               901    -    951
UN16261        --> TGAAGAAGACCACCGGGGAGAGACCTGTGTAAGCATGTATCGCTTCTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536215       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY937857       <-- TGAAGAAGACCACCGGGGAGAGACCTGTGTAAGCATGTATCGCTTCTTTC  Raphanus sativus cv Early Scarlet Globe
EX748615       <-- TGAAGAAGACCACCGGGGAGAGACCTGTGTAAGCATGTATCGCTTCTCTC  Raphanus raphanistrum subsp. maritimus
EX763534       <-- TGAAGAAGACCACCGGGGAGAGACCTGTGTAAGCATGTATCGCTTCTCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536221       <-- TGAAGAAGACCACTGGGGAGAGACCTGTGTAAGCATGTATCGCTTCTTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY949317       <-- TGAAGAAGACCACCGGGGAGAGACCTGTGTAAGCTTGTATCGCTTCTTTC  Raphanus sativus cv Rat-Tail Radish #3870
EX755355       <-- TGAAGAAGACCACTGGGGAGAGACCTGTGTAAGCATGTATCGCTTCTTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933085       <-- TGAAGAAGACCACCGGGGAGAGACCTGTGTAAGCATGTATCGCTTCTTTC  Raphanus sativus var. oleiformis
FD542179       <-- TGAAGAAGACCACTGGGGAGAGACCTGTGTAAGCATGTATCGCTTCTTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY925275       <-- TGAAGAAGACCACCGGGGAGAGACCTGTGTAAGCATGTATCGCTTCTCTC  Raphanus raphanistrum subsp. landra
EX762515       <-- TGAAGAAGACCACCGGGGAGAGACCTGTGTAAGCATGTATCGCTTCTTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD941059       <-- TGAAGAAGACCACCGGGGAGAGACCTGTGTAAGCATGTATCGCTTCTTTC  Raphanus sativus var. oleiformis
EY925319       <-- TGAAGAAGACCACCGGGGAGAGACCTGTGTAAGCATGTATCGCTTCTCTC  Raphanus raphanistrum subsp. landra
FD570927       <-- TGAAGAAGACCACCGGGGAGAGACCTGTGTAAGCATGTATCGCTTCTTTC  Raphanus sativus cv Early Scarlet Globe
EY934103       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD936790       --> ..................................................  Raphanus sativus var. oleiformis
EX752499       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV540721       --> TGAAGAAGACCACTGGGGAGAGACCTGTGTAAGCATGTATCGCTTCTTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538312       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759458       --> TGAAGAAGACCACTGGGGAGAGACCTGTGTAAGCATGTATCG........  Raphanus raphanistrum subsp. raphanistrum (MS)
EY920822       --> ..................................................  Raphanus raphanistrum subsp. landra
EY928652       --> TGAAGAAGACCACCGGGGAGAGACCTGTGTAAGCATGTATCGCTTCTTTC  Raphanus sativus var. oleiformis
EX767597       --> TGAAGAAGACCACCGGGGAGAGACCTGTGTAAGCATGTATCGCTTCTCTC  Raphanus raphanistrum subsp. raphanistrum (NY)

               951    -   1001
UN16261        --> AGTGTTTGCCATAGGTGTAGCGCCATGGTTTCGCTTGGAGAGAAGAAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536215       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY937857       <-- AGTGTTTGCCATAGGTGTAGCGCCATGGTTTCGCTTGGAGAGAAGAAGGA  Raphanus sativus cv Early Scarlet Globe
EX748615       <-- AGTGTTTGCCATAGGTGTAGCGCCATGGTTTCGCTTGGAGAGAAGAATGA  Raphanus raphanistrum subsp. maritimus
EX763534       <-- AGTGTTTGCCATAGGTGTAGCGCCATG.......................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536221       <-- AGTGTTTGCCATAGGAGTAGCGCCATGGTTTCGCTTGGAGAGAAGAAGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY949317       <-- AGTGTTTGCCATAGGTGTAGCGCCATGGTTTCGCTTGGAGAGAAGAAGGA  Raphanus sativus cv Rat-Tail Radish #3870
EX755355       <-- AGTGTTTGCCATAGGAGTAGCGCCATGGTTTCGCTTGGAGAGAAGAAGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933085       <-- AGTGTTTGCCATAGGTGTAGCGCCATGGTTTCGCTTGGAGAGAAGAAGGA  Raphanus sativus var. oleiformis
FD542179       <-- AGTGTTTGCCATAGGAGTAGCGCCATGGTTTCGCTTGGAGAGAAGAAGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY925275       <-- AGTGTTTGCCATAGGTGTAGCGCCATGGTTTCGCTTGGAGAGAAGAATGA  Raphanus raphanistrum subsp. landra
EX762515       <-- AGTGTTTGCCATAGGTGTAGCGCCATGGTTTCGCTTGGAGAGAAGAAGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD941059       <-- AGTGTTTGCCATAGGTGTAGCGCCATGGTTTCGCCTGGAGAGAAGAGGGA  Raphanus sativus var. oleiformis
EY925319       <-- AGTGTTTGCCATAGGTGTAGCGCCATGGTTTCGCTTGGAGAGAAGAAtcc  Raphanus raphanistrum subsp. landra
FD570927       <-- AGTGTTTGCCATAGGTGTAGCGCCATGGTTTCGCTTGGAGAGAAGAAGGA  Raphanus sativus cv Early Scarlet Globe
EY934103       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD936790       --> ..................................................  Raphanus sativus var. oleiformis
EX752499       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV540721       --> AGTGTTTGCCATAGGAGTAGCGCCATGGTTT...................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538312       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759458       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY920822       --> ..................................................  Raphanus raphanistrum subsp. landra
EY928652       --> AGTGTTTGCC........................................  Raphanus sativus var. oleiformis
EX767597       --> AGTGTTTGCCATAG-TGTAGCGCCATGGTTTCGCTTcc............  Raphanus raphanistrum subsp. raphanistrum (NY)

               1001   -   1051
UN16261        --> AAGGAAAGCAGATCAGTCTTGAAAAGGTTTTCTCACTTTAGTCTTTCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536215       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY937857       <-- AAGGAAAGCAGATCAGTCTcc.............................  Raphanus sativus cv Early Scarlet Globe
EX748615       <-- Agaaagatcagtcttcc.................................  Raphanus raphanistrum subsp. maritimus
EX763534       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536221       <-- --AGAA---AGATCAGTCTTGAAAAGGTTTTCTCACTTTAG.........  Raphanus raphanistrum subsp. raphanistrum (MS)
EY949317       <-- AAGGAAAGCAGATCAGTCTTcc............................  Raphanus sativus cv Rat-Tail Radish #3870
EX755355       <-- --AGAA---AGATCAGTCTTGAAAAGcc......................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933085       <-- AAGGAAAGCAGATCAGTCTTGAAAAGATTTTCTCACTTTAGTCTTTCTTT  Raphanus sativus var. oleiformis
FD542179       <-- --AGAA---AGATCAGTCTTGAAAAGGTTTTCTCACTTTcc.........  Raphanus raphanistrum subsp. raphanistrum (MS)
EY925275       <-- --AGAA---AGATCAGTCTTGAAAAGGTTTTCTCACTTTcc.........  Raphanus raphanistrum subsp. landra
EX762515       <-- AAGGAAAGCAGATCAGTCTTc.............................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD941059       <-- AAGGAAAGCAGATCAGTCTTcc............................  Raphanus sativus var. oleiformis
EY925319       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD570927       <-- AAGGAAAGCAGATCAGTCTTcc............................  Raphanus sativus cv Early Scarlet Globe
EY934103       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD936790       --> ..................................................  Raphanus sativus var. oleiformis
EX752499       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV540721       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538312       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759458       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY920822       --> ..................................................  Raphanus raphanistrum subsp. landra
EY928652       --> ..................................................  Raphanus sativus var. oleiformis
EX767597       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               1051   -   1101
UN16261        --> CC
                   ~~
EV536215       <-- ..
EY937857       <-- ..
EX748615       <-- ..
EX763534       <-- ..
EV536221       <-- ..
EY949317       <-- ..
EX755355       <-- ..
EY933085       <-- CC
FD542179       <-- ..
EY925275       <-- ..
EX762515       <-- ..
FD941059       <-- ..
EY925319       <-- ..
FD570927       <-- ..
EY934103       --> ..
FD936790       --> ..
EX752499       --> ..
EV540721       --> ..
FD538312       --> ..
EX759458       --> ..
EY920822       --> ..
EY928652       --> ..
EX767597       --> ..