1      -     51
UN16288        --> GGGCTTTCGTCTACTCAACTAAAAAAAAAA-GAACGCCGCTCGTCTCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547694       <-- GGGCTTTCGTCTACTCAACTAAAAAGAAAA-AAACGCCGCTCGTCTCTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720087       <-- ....ggggtctccCTCGACTAAAAAAAAAAAGAACGCCGCTCGTCTCTTC  Raphanus sativus var. oleiformis
EY920741       <-- ............cCTCGACTAAAAAAAAAA-GAACGCCGCTCGTCTCTTC  Raphanus raphanistrum subsp. landra
EW738324       <-- ..gggtctccctcgactaaaAAAAAAAAAA-GAACGCCGCTCGTCTCTTC  Raphanus sativus cv Rat-Tail Radish #3870
FD961188       <-- ........................................TCGTCTCTTC  Raphanus raphanistrum subsp. maritimus
FD528922       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW738958       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD551855       --> GGGCTTTCGTCTACTCAACTAAAAAGAAAA-AAACGCCGCTCGTCTCTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY933591       --> ........ggCTACTCAACTAAAAAGAAAA-AAACGCCGCTCGTCTCTTC  Raphanus sativus var. oleiformis
FD550080       --> ........ggCTACTCAACTAAAAAGAAAA-AAACGCCGCTCGTCTCTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX904545       --> ..........ggACTCAACTAAAAAGAAAA-AAACGCCGCTCGTCTCTTC  Raphanus sativus cv Rat-Tail Radish #3870
FD580630       --> ..........ggACTCAACTAAAAAGAAAA-AAACGCCGCTCGTCTCTTC  Raphanus sativus cv Rat-Tail Radish #3870
EW715509       --> ....ggggtctccCTCGACTAAAAAAAAAAAGAACGCCGCTCGTCTCTTC  Raphanus sativus var. oleiformis
EY900830       --> .....gggtctccCTCGACTAAAAAAAAAAAGAACGCCGCTCGTCTCTTC  Raphanus raphanistrum subsp. maritimus
EY922790       --> ....ggcgtctccCTCGACTAAAAAAAAAAAGAACGCCGCTCGTCTCTTC  Raphanus raphanistrum subsp. landra
EY925220       --> ............cCTCGACTAAAAAAAAAA-GAACGCCGCTCGTCTCTTC  Raphanus raphanistrum subsp. landra
EW734393       --> ..gggtctccctcgactaaaAAAAAAAAAA-GAACGCCGCTCGTCTCTTC  Raphanus sativus cv Rat-Tail Radish #3870
FD965448       --> ..........cctcgactaaAAAAAAAAAA-GAACGCCGCTCGTCTCTTC  Raphanus raphanistrum subsp. maritimus
FD532456       --> ...............gggactAAAAAAAAA-GAACGCCGCTCGTCTCTTC  Raphanus raphanistrum subsp. maritimus
EW734661       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW714839       --> ..................................................  Raphanus sativus var. oleiformis
EX886874       --> ..................................................  Raphanus sativus var. oleiformis
EX896711       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               51     -    101
UN16288        --> AGAGAGTGTTCCACTTTCCAGGATTTGCTCAAGAGAAAAAAAAA--TGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547694       <-- AGAGAGTGTTCCACTTTCCAGGATTTGCTCAAGAGAAAAAAAAA--TGAG
EW720087       <-- AGAGAGTGTTCCACTTTCCAGGATTTGCTCAAGAGAAAAAAAAA--TGAG
EY920741       <-- AGAGAGTGTTCCACTTTCCAGGATTTGCTCAAGAGAAAAAAAAA--TGAG
EW738324       <-- AGAGAGTGTTCCACTTTCCAGGATTTGCTCAAGAGAAAAAAAAA--TGAG
FD961188       <-- AGAGAGTGTTCCACTTTCCAGGATTTGCTCAAGAGAAAAAAAA---TGAG
FD528922       <-- ..................................................
EW738958       <-- ..................................................
FD551855       --> AGAGAGTGTTCCACTTTCCAGGATTTGCTCAAGAGAAAAAAAAA--TGAG
EY933591       --> AGAGAGTGTTC-ACTTTCCAGGATTTGCTCAAGAGAAAAAAAA---TGAG
FD550080       --> AGAGAGTGTTCCACTTTCCAGGATTTGCTCAAGAGAAAAAAAAA--TGAG
EX904545       --> AGAGAGTGTTC-ACTTTCCGGGATTTGCTCAAGAGAAAAAAA----TGAG
FD580630       --> AGAGAGTGTTC-ACTTTCCAGGATTTGCTCAAGAGAAAAAAAA---TGAG
EW715509       --> AGAGAGTGTTCCACTTTCCAGGATTTGCTCAAGAGAAAAAAAAA--TGAG
EY900830       --> AGAGAGTGTTCCACTTTCCAGGATTTGCCCAAGAGAAAAAAAAA-ATGAG
EY922790       --> AGAGAGTGTTCC-TTTTCCAGGATTTGCTCAAGAGAAAAAAAAA--TGAG
EY925220       --> AGAGAGTGTTCCACTTTCCAGGATTTGCTCAAGAGAAAAAAAAA--TGAG
EW734393       --> AGAGAGTGTTCCACTTTCCAGGATTTGCTCAAGAGAAAAAAAAA--TGAG
FD965448       --> AGAGAGTGTTCCACTTTCCAGGATTTGCTCAAGAGAAAAAAAA---TGAG
FD532456       --> AGAGAGTGTTCCACTTTCCAGGATTTGCTCAAGAGAAAAAAAAAAATGAG
EW734661       --> ..................................................
EW714839       --> ..................................................
EX886874       --> ..................................................
EX896711       --> ..................................................

               101    -    151
UN16288        --> TAGAGGAAGTGCAGCCGTTGCAAAGGGAAAGAAGAAGGGAGTTTCCTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547694       <-- TAGAGGAAGTGCAGCTGTTGCCAAGGGAAAGAAGAAGGGAGTGTCCTTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720087       <-- TAGAGGAAGTGCAGCCGTTGCCAAGGGAAAGAAGAAGGGAGTTTCCTTCT  Raphanus sativus var. oleiformis
EY920741       <-- TAGAGGAAGTGCAGCCGTTGCAAAGGGAAAGAAGAAGGGAGTTTCCTTCT  Raphanus raphanistrum subsp. landra
EW738324       <-- TAGAGGAAGTGCAGCCGTTGCCAAGGGAAAGAAGAAGGGAGTTTCCTTCT  Raphanus sativus cv Rat-Tail Radish #3870
FD961188       <-- TAGAGGAAGTGCAGCCGTTGCAAAGGGAAAGAAGAAGGGAGTTTCCTTCT  Raphanus raphanistrum subsp. maritimus
FD528922       <-- ................................AGAAGGGAGTTTCCTTCT  Raphanus raphanistrum subsp. maritimus
EW738958       <-- ....................................GGGAGTTTCCTTCT  Raphanus sativus cv Rat-Tail Radish #3870
FD551855       --> TAGAGGAAGTGCAGCTGTTGCCAAGGGAAAGAAGAAGGGAGTGTCCTTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY933591       --> TAGAGGAAGTGCAGCCGTTGCAAAGGGAAAGAAGAAGGGAGTTTCCTTCT  Raphanus sativus var. oleiformis
FD550080       --> TAGAGGAAGTGCAGCTGTTGCCAAGGGAAAGAAGAAGGGAGTGTCCTTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX904545       --> TAGAGGAAGTGCAGCCGTTGCAAAGGGAAAGAAGAAGGGAGTTTCCTTCT  Raphanus sativus cv Rat-Tail Radish #3870
FD580630       --> TAGAGGAAGTGCAGCCGTTGCAAAGGGAAAGAAGAAGGGAGTTTCCTTCT  Raphanus sativus cv Rat-Tail Radish #3870
EW715509       --> TAGAGGAAGTGCAGCCGTTGCCAAGGGAAAGAAGAAGGGAGTTTCCTTCT  Raphanus sativus var. oleiformis
EY900830       --> TAGAGGAAGTGCAGCCGTTGCAAAGGGAAAGAAGAAGGGAGTTTCCTTCT  Raphanus raphanistrum subsp. maritimus
EY922790       --> TAGAGGAAGTGCAGCCGTTGCCAAGGGAAAGAAGAAGGGAGTTTCCTTCT  Raphanus raphanistrum subsp. landra
EY925220       --> TAGAGGAAGTGCAGCCGTTGCAAAGGGAAAGAAGAAGGGAGTTTCCTTCT  Raphanus raphanistrum subsp. landra
EW734393       --> TAGAGGAAGTGCAGCCGTTGCCAAGGGAAAGAAGAAGGGAGTTTCCTTCT  Raphanus sativus cv Rat-Tail Radish #3870
FD965448       --> TAGAGGAAGTGCAGCCGTTGCAAAGGGAAAGAAGAAGGGAGTTTCCTTCT  Raphanus raphanistrum subsp. maritimus
FD532456       --> TAGAGGAAGTGCAGCCGTTGCAAAGGGAAAGAAGAAGGGAGTTTCCTTCT  Raphanus raphanistrum subsp. maritimus
EW734661       --> ....................................GGGAGTTTCCTTCT  Raphanus sativus cv Rat-Tail Radish #3870
EW714839       --> ..................................................  Raphanus sativus var. oleiformis
EX886874       --> ..................................................  Raphanus sativus var. oleiformis
EX896711       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               151    -    201
UN16288        --> CCATTGATTGCTCCAAGCCTGTCGATGACAAGATCATGGAGATTGCTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547694       <-- CCATTGACTGCTCCAAGCCTGTCGATGACAAGATCATGGAGATTGCTTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720087       <-- CCATTGATTGCTCCAAGCCTGTCGATGACAAGATCATGGAGATTGCTTCC  Raphanus sativus var. oleiformis
EY920741       <-- CCATTGATTGCTCCAAGCCTGTCGATGACAAGATCATGGAGATTGCTTCC  Raphanus raphanistrum subsp. landra
EW738324       <-- CCATTGATTGCTCCAAGCCTGTCGATGACAAGATCATGGAGATTGCTTCC  Raphanus sativus cv Rat-Tail Radish #3870
FD961188       <-- CCATTGATTGCTCCAAGCCTGTCGATGACAAGATCATGGAGATTGCTTCC  Raphanus raphanistrum subsp. maritimus
FD528922       <-- CCATTGATTGCTCCAAGCCTGTCGATGACAAGATCATGGAGATTGCTTCC  Raphanus raphanistrum subsp. maritimus
EW738958       <-- CCATTGATTGCTCCAAGCCTGTCGATGACAAGATCATGGAGATTGCTTCC  Raphanus sativus cv Rat-Tail Radish #3870
FD551855       --> CCATTGACTGCTCCAAGCCTGTCGATGACAAGATCATGGAGATTGCTTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY933591       --> CCATTGACTGCTCCAAGCCCGTCGATGACAAGATCATGGAGATTGCTTCC  Raphanus sativus var. oleiformis
FD550080       --> CCATTGACTGCTCCAAGCCTGTCGATGACAAGATCATGGAGATTGCTTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX904545       --> CCATTGACTGCTCCAAGCCTGTCGATGACAAGATCATGGAGATTGCTTCC  Raphanus sativus cv Rat-Tail Radish #3870
FD580630       --> CCATTGACTGCTCCAAGCCTGTCGATGACAAGATCATGGAGATTGCTTCC  Raphanus sativus cv Rat-Tail Radish #3870
EW715509       --> CCATTGATTGCTCCAAGCCTGTCGATGACAAGATCATGGAGATTGCTTCC  Raphanus sativus var. oleiformis
EY900830       --> CCATTGATTGCTCCAAGCCTGTCGATGACAAGATCATGGAGATTGCTTCC  Raphanus raphanistrum subsp. maritimus
EY922790       --> CTATCGATTGCTCCAAGCCTGTCGATGACAAGATCATGGAGATTGCTTCC  Raphanus raphanistrum subsp. landra
EY925220       --> CCATTGATTGCTCCAAGCCTGTCGATGACAAGATCATGGAGATTGCTTCC  Raphanus raphanistrum subsp. landra
EW734393       --> CCATTGATTGCTCCAAGCCTGTCGATGACAAGATCATGGAGATTGCTTCC  Raphanus sativus cv Rat-Tail Radish #3870
FD965448       --> CCATTGATTGCTCCAAGCCTGTCGATGACAAGATCATGGAGATTGCTTCC  Raphanus raphanistrum subsp. maritimus
FD532456       --> CCATTGATTGCTCCAAGCCTGTCGATGACAAGATCATGGAGATTGCTTCC  Raphanus raphanistrum subsp. maritimus
EW734661       --> CCATTGATTGCTCCAAGCCTGTCGATGACAAGATCATGGAGATTGCTTCC  Raphanus sativus cv Rat-Tail Radish #3870
EW714839       --> ..................................................  Raphanus sativus var. oleiformis
EX886874       --> ..................................................  Raphanus sativus var. oleiformis
EX896711       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               201    -    251
UN16288        --> CTCGAGAAGTTCCTTCAGGAGAGGATCAAAGTCGGTGGCAAAGCCGGTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547694       <-- CTCGAGAAGTTCCTTCAGGAGAGGATCAAAGTCGGTGGCAAAGTCGGTGC
EW720087       <-- CTCGAGAAGTTCCTTCAGGAGAGGATCAAAGTCGGTGGCAAAGCCGGTGC
EY920741       <-- CTCGAGAAGTTCCTTCAGGAGAGGATCAAAGTCGGTGGCAAAGCTGGTGC
EW738324       <-- CTCGAGAAGTTCCTTCAGGAGAGGATCAAAGTCGGTGGCAAAGCCGGTGC
FD961188       <-- CTCGAGAAGTTCCTTCAGGAGAGGATCAAAGTCGGTGGCAAAGCCGGTGC
FD528922       <-- CTCGAGAAGTTCCTTCAGGAGAGGATCAAAGTCGGTGGCAAAGCCGGTGC
EW738958       <-- CTCGAGAAGTTCCTTCAGGAGAGGATCAAAGTCGGTGGCAAAGCCGGTGC
FD551855       --> CTCGAGAAGTTCCTTCAGGAGAGGATCAAAGTCGGTGGCAAAGTCGGTGC
EY933591       --> CTCGAGAAGTTCCTTCAGGAGAGGATCAAAGTCGGTGGCAAAGCCGGTGC
FD550080       --> CTCGAGAAGTTCCTTCAGGAGAGGATCAAAGTCGGTGGCAAAGCCGGTGC
EX904545       --> CTCGAGAAGTTTCTTCAGGAGAGGATCAAAGTCGGTGGCAAAGCCGGTGC
FD580630       --> CTCGAGAAGTTTCTTCAGGAGAGGATCAAAGTCGGTGGCAAAGCCGGTGC
EW715509       --> CTCGAGAAGTTCCTTCAGGAGAGGATCAAAGTCGGTGGCAAAGCCGGTGC
EY900830       --> CTCGAGAAGTTCCTTCAGGAGAGGATCAAAGTCGGTGGCAAAGCCGGTGC
EY922790       --> CTCGAGAAGTTCCTTCAGGAGAGGATCAAAGTCGGTGGCAAAGCCGGTGC
EY925220       --> CTCGAGAAGTTCCTTCAGGAGAGGATCAAAGTCGGTGGCAAAGCTGGTGC
EW734393       --> CTCGAGAAGTTCCTTCAGGAGAGGATCAAAGTCGGTGGCAAAGCCGGTGC
FD965448       --> CTCGAGAAGTTCCTTCAGGAGAGGATCAAAGTCGGTGGCAAAGCCGGTGC
FD532456       --> CTCGAGAAGTTCCTTCAGGAGAGGATCAAAGTCGGTGGCAAAGCCGGTGC
EW734661       --> CTCGAGAAGTTCCTTCAGGAGAGGATCAAAGTCGGTGGCAAAGCCGGTGC
EW714839       --> ..........................CAAAGTCGGTGGCAAAGCCGGTGC
EX886874       --> ..................................................
EX896711       --> ..................................................

               251    -    301
UN16288        --> ACTCGGTGATTCCGTCACAATCACCCGTGAGAAGAACAAGATCACCGTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547694       <-- ACTCGGTGATTCCGCCACAATCACCCGTGAGAAGAACAAGATCACCGTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720087       <-- ACTCGGTGATTCCGTCACTATCACCCGTGAGAAGAACAAGATCACCGTCA  Raphanus sativus var. oleiformis
EY920741       <-- ACTCGGTGATTCCGTCACAATCACCCGTGAGAAGAACAAGATCACCGTCA  Raphanus raphanistrum subsp. landra
EW738324       <-- ACTCGGTGATTCCGTCACGATCACCCGTGAGAAGAACAAGATCACCGTCA  Raphanus sativus cv Rat-Tail Radish #3870
FD961188       <-- ACTCGGTGATTCCGTCACAATCACCCGTGAGAAGAACAAGATCACCGTCA  Raphanus raphanistrum subsp. maritimus
FD528922       <-- ACTCGGTGATTCCGTCAAAATCACCCGTGAGAAGAACAAGATCACCGTCA  Raphanus raphanistrum subsp. maritimus
EW738958       <-- ACTCGGTGATTCCGTCACGATCACCCGTGAGAAGAACAAGATCACCGTCA  Raphanus sativus cv Rat-Tail Radish #3870
FD551855       --> ACTCGGTGATTCCGCCACAATCACCCGTGAGAAGAACAAGATCACCGTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY933591       --> ACTCGGTGATTCCGTCACGATCACCCGTGAGAAGAACAAGATCACCGTCA  Raphanus sativus var. oleiformis
FD550080       --> ACTCGGTGATTCCGTCACAATCACCCGTGAGAAGAACAAGATCACCGTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX904545       --> ACTCGGTGATTCCGTCACGATCACCCGTGAGAAGAACAAGATCACCGTCA  Raphanus sativus cv Rat-Tail Radish #3870
FD580630       --> ACTCGGTGATTCCGTCACGATCACCCGTGAGAAGAACAAGATCACCGTCA  Raphanus sativus cv Rat-Tail Radish #3870
EW715509       --> ACTCGGTGATTCCGTCACTATCACCCGTGAGAAGAACAAGATCACCGTCA  Raphanus sativus var. oleiformis
EY900830       --> ACTCGGTGATTCCGTCACAATCACCCGTGAGAAGAACAAGATCACCGTCA  Raphanus raphanistrum subsp. maritimus
EY922790       --> ACTCGGTGATTCCGTCACGATCACCCGTGAGAAGAACAAGATCACCGTCA  Raphanus raphanistrum subsp. landra
EY925220       --> ACTCGGTGATTCCGTCACAATCACCCGTGAGAAGAACAAGATCACCGTCA  Raphanus raphanistrum subsp. landra
EW734393       --> ACTCGGTGATTCCGTCACGATCACCCGTGAGAAGAACAAGATCACCGTCA  Raphanus sativus cv Rat-Tail Radish #3870
FD965448       --> ACTCGGTGATTCCGTCACAATCACCCGTGAGAAGAACAAGATCACCGTCA  Raphanus raphanistrum subsp. maritimus
FD532456       --> ACTCGGTGATTCCGTCACAATCACCCGTGAGAAGAACAAGATCACCGTCA  Raphanus raphanistrum subsp. maritimus
EW734661       --> ACTCGGTGATTCCGTCACGATCACCCGTGAGAAGAACAAGATCACCGTCA  Raphanus sativus cv Rat-Tail Radish #3870
EW714839       --> ACTCGGTGATTCCGTCACGATCACCCGTGAGAAGAACAAGACCGCCGTCA  Raphanus sativus var. oleiformis
EX886874       --> ............................................CCGTCA  Raphanus sativus var. oleiformis
EX896711       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               301    -    351
UN16288        --> CTTCCGATGGTCAATTCTCCAAGAGGTATCTCAAGTACTTGACGAAGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547694       <-- CTCCCGATGGTCAATTCTCCAAGAGGTATCTCAAGTACTTGACGAAGAAG
EW720087       <-- CTTCCGATGGTCAATTCTCCAAGAGGTATCTCAAGTACTTGACGAAGAAG
EY920741       <-- CTTCCGATGGTCAATTCTCCAAGAGGTATCTCAAGTACTTGACGAAGAAG
EW738324       <-- CTTCCGATGGTCAATTCTCCAAGAGGTATCTCAAGTACTTGACGAAGAAG
FD961188       <-- CTTCCGATGGTCAATTCTCCAAGAGGTATCTCAAGTACTTGACGAAGAAG
FD528922       <-- CTTCCGATGGTCAATTCTCCAAGAGGTATCTCAAGTACTTGACGAAGAAG
EW738958       <-- CTTCCGATGGTCAATTCTCCAAGAGGTATCTCAAGTACTTGACGAAGAAG
FD551855       --> CTCCCGATGGTCAATTCTCCAAGAGGTATCTCAAGTACTTGACGAAGAAG
EY933591       --> CTTCCGATGGTCAATTCTCCAAGAGGTATCTCAAGTACTTGACGAAGAAG
FD550080       --> CTTCCGATGGTCAATTCTCCAAGAGGTATCTCAAGTACTTGACGAAGAAG
EX904545       --> CTTCCGATGGTCAATTCTCCAAGAGGTATCTCAAGTACTTGGCGAAGAAG
FD580630       --> CTTCCTATGGTCAATTCTCCAAGAGGTATCTCAAGTACTTGACGAAGGAG
EW715509       --> CTTCCGATGGTCAATTCTCCAAGAGGTATCTCAAGTACTTGACGAAGAAG
EY900830       --> CTTCCGATGGTCAATTCTCCAAGAGGTATCTCAAGTACTTGACGAAGAAG
EY922790       --> CTTCCGATGGTCAATTCTCCAAGAGGTATCTCAAGTACTTGACGAAGAAG
EY925220       --> CTTCCGATGGTCAATTCTCCAAGAGGTATCTCAAGTACTTGACGAAGAAG
EW734393       --> CTTCCGATGGTCAATTCTCCAAGAGGTATCTCAAGTACTTGACGAAGAAG
FD965448       --> CTTCCGATGGTCAATTCTCCAAGAGGTATCTCAAGTACTTGACGAAGAAG
FD532456       --> CTTCCGATGGTCAATTCTCCAAGAGGTATCTCAAGTACTTGACGAAGAAG
EW734661       --> CTTCCGATGGTCAATTCTCCAAGAGGTATCTCAAGTACTTGACGAAGAAG
EW714839       --> CTTCCGATGGTCAATTCTCCAAGAGGTATCTCAAGTACTTGACGAAGAAG
EX886874       --> CTTCCGATGGTCAATTCTCCAAGAGGTATCTCAAGTACTTGACGAAGAAG
EX896711       --> ..................................................

               351    -    401
UN16288        --> TACTTGAAGAAGCACAACGTGAGGGATTGGCTCAGAGTGATTGCAGCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547694       <-- TACTTGAAGAAGCACAACGTGAGGGATGGGCTCAGAGTGATTGCAGCCAA
EW720087       <-- TACTTGAAGAAGCACAACGTGAGGGATTGGCTCAGAGTGATTGCTGCCAA
EY920741       <-- TACTTGAAGAAGCACAACGTGAGGGATTGGCTCAGAGTGATTGCAGCCAA
EW738324       <-- TACTTGAAGAAGCACAACGTGAGGGATTGGCTCAGAGTGATTGCTGCCAA
FD961188       <-- TACTTGAAGAAGCACAACGTGAGGGATTGGCTCAGAGTGATTGCAGCCAA
FD528922       <-- TACTTGAAGAAGCACAACGTGAGGGATTGGCTCAGAGTGATTGCAGCCAA
EW738958       <-- TACTTGAAGAAGCACAACGTGAGGGATTGGCTCAGAGTGATTGCTGTCAA
FD551855       --> TACTTGAAGAAGCACAACGTGAGGGATGGGCTCAGAGTGATTGCAGCCAA
EY933591       --> TACTTGAAGAAGCACAACGTGAGGGATTGGCTCAGAGTGATTGCAGCCAA
FD550080       --> TACTTGAAGAAGCACAACGTGAGGGATTGGCTCAGAGTGATTGCAGCCAA
EX904545       --> TACTTGAAGAAGCACAACGTGAGGGATTGGCTCAGAGTGATTGCAGCCAA
FD580630       --> TACTTGAAGAAGCACAACGTGAGGGATTGGCTCAGAGTGATTGCAGCCAA
EW715509       --> TACTTGAAGAAGCACAACGTGAGGGATTGGCTCAGAGTGATTGCTGCCAA
EY900830       --> TACTTGAAGAAGCACAACGTGAGGGATTGGCTCAGAGTGATTGCAGCCAA
EY922790       --> TACTTGAAGAAGCACAACGTGAGGGATTGGCTCAGAGTGATTGCTGCCAA
EY925220       --> TACTTGAAGAAGCACAACGTGAGGGATTGGCTCAGAGTGATTGCAGCCAA
EW734393       --> TACTTGAAGAAGCACAACGTGAGGGATTGGCTCAGAGTGATTGCTGCCAA
FD965448       --> TACTTGAAGAAGCACAACGTGAGGGATTGGCTCAGAGTGATTGCAGCCAA
FD532456       --> TACTTGAAGAAGCACAACGTGAGGGATTGGCTCAGAGTGATTGCAGCCAA
EW734661       --> TACTTGAAGAAGCACAACGTGAGGGATTGGCTCAGAGTGATTGCTGTCAA
EW714839       --> TACTTGAAGAAGCACAACGTGAGGGATTGGCTCAGAGTGATTGCAGCTAA
EX886874       --> TACTTGAAGAAGCACAACGTGAGGGATTGGCTCAGAGTGATTGCAGCCAA
EX896711       --> ..................................................

               401    -    451
UN16288        --> CAAGGACCGTAACCTCTACGAGTT-GAGGTACTTCAACATCGCTGAGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547694       <-- CAAGGACCGTAACCTTTACGAGTT-GAGGTACTTCAACATCGCTGAGAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720087       <-- CAAGGACCGTAACCTCTACGAGTT-GAGGTACTTCAACATCGCTGAGAAC  Raphanus sativus var. oleiformis
EY920741       <-- CAAGGACCGTAACCTCTACGAGTT-GAGGTACTTCAACATTGCCGAGAAC  Raphanus raphanistrum subsp. landra
EW738324       <-- CAAGGACCGTAACCTCTACGAGTT-GAGGTACTTCAACATCGCTGAGAAC  Raphanus sativus cv Rat-Tail Radish #3870
FD961188       <-- CAAGGACCGTAACCTCTACGAGTT-GAGGTACTTCAACATTGCTGAGAAC  Raphanus raphanistrum subsp. maritimus
FD528922       <-- CAAGGACCGTAACCTCTACGAGTT-GAGGTACTTCAACATTGCTGAGAAC  Raphanus raphanistrum subsp. maritimus
EW738958       <-- CAAGGACCGTAACCTCTACGAGTT-GAGGTACTTCAACATCGCTGAGAAC  Raphanus sativus cv Rat-Tail Radish #3870
FD551855       --> CAAGGACCGTAACCTCTACGAGTT-GAGGTACTTCAACATCGCTGAGAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY933591       --> CAAGGACCGTAACCTCTACGAGTT-GAGGTACTTCAACATCGCTGAGAAC  Raphanus sativus var. oleiformis
FD550080       --> CAAGGACCGTAACCTCTACGAGTT-GAGGTACTTCAACATCGCTGAGAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX904545       --> CAAGGACCCTAACCTCTACGAGTT-GAGGTACTTCAACATCGCTGAGAAC  Raphanus sativus cv Rat-Tail Radish #3870
FD580630       --> CAAGGACCCTAACCTCTACGAGTT-GAGGTACTTCAACATCGCTGAGAAC  Raphanus sativus cv Rat-Tail Radish #3870
EW715509       --> CAAGGACCGTAACCTCTACGAGTT-GAGGTACTTCAACATCGCTGAGAAC  Raphanus sativus var. oleiformis
EY900830       --> CAAGGACCGTAACCTCTACGAGTT-GAGGTACTTCAACATTGCTGAGAAC  Raphanus raphanistrum subsp. maritimus
EY922790       --> CAAGGACCGTAACCTCTACGAGTT-GAGGTACTTCAACATCGCTGAGAAC  Raphanus raphanistrum subsp. landra
EY925220       --> CAAGGACCGTAACCTCTACGAGTT-GAGGTACTTCAACATTGCCGAGAAC  Raphanus raphanistrum subsp. landra
EW734393       --> CAAGGACCGTAACCTCTACGAGTT-GAGGTACTTCAACATCGCTGAGAAC  Raphanus sativus cv Rat-Tail Radish #3870
FD965448       --> CAAGGACCGTAACCTCTACGAGTT-GAGGTACTTCAACATTGCTGAGAAC  Raphanus raphanistrum subsp. maritimus
FD532456       --> CAAGGACCGTAACCTCTACGAGTT-GAGGTACTTCAACATTGCTGAGAAC  Raphanus raphanistrum subsp. maritimus
EW734661       --> CAAGGACCGTAACCTCTACGAGTT-GAGGTACTTCAACATCGCTGAGAAC  Raphanus sativus cv Rat-Tail Radish #3870
EW714839       --> CAAGGACCCTAACCTCTACGAGTTTGAGGTACTTCAACATCGCTGAGAAC  Raphanus sativus var. oleiformis
EX886874       --> CAAGGACCCTAACCTCTACGAGTT-GAGGTACTTCAACATCGCTGAGAAC  Raphanus sativus var. oleiformis
EX896711       --> ..............gCTACGAGTT-GAGGTACTTCAACATCGCTGAGAAC  Raphanus sativus cv Early Scarlet Globe

               451    -    501
UN16288        --> GAGGGAGAGGAAGAAGACTAGAAGAGTTATTACATCTGTTTCCGGTTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547694       <-- GAGGGAGAGGAAGAAGACTAGAAGAGTTATTACATCTGTTTCCGGTTTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720087       <-- GAGGGAGAGGAAGAAGACTAGAAGAGTTATTACATCTGTTTCCGGTTTTT  Raphanus sativus var. oleiformis
EY920741       <-- GAGGGAGAGGAAGAAGACTAGAAGAGCTATTACATCTGTTTCCGTTTTTT  Raphanus raphanistrum subsp. landra
EW738324       <-- GAGGGAGAGGAAGAAGACTAGAAGAGTTATTACATCTGTTTCCAGTTTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD961188       <-- GAGGGAGAGGAAGAAGACTAGAAGAGTTATTACATCTGTTTCCGTTTTTT  Raphanus raphanistrum subsp. maritimus
FD528922       <-- GAGGGAGAGGAAGAAGACTAGAAGAGCTATTACATCTGTTTCCGTTTTTT  Raphanus raphanistrum subsp. maritimus
EW738958       <-- GAGGGAGAGGAAGAAGACTAGAAGAGTTATTACATCTGTTTCCGGTTTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD551855       --> GAGGGAGAGGAAGAAGACTAGAAGAGTTATTACATCTGTTTCCGGTTTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY933591       --> GAGGGAGAGGAAGAAGACTAGAAGAGTTATTACATCTGTTTCCGGTTTTT  Raphanus sativus var. oleiformis
FD550080       --> GAGGGAGAGGAAGAAGACTAGAAGAGTTATTACATCTGTTTCCGGTTTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX904545       --> GAGGGAGAGGAAGAAGACTAGAAGAGCTATTACTTCTGTTTCCGGTTTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD580630       --> GAGGGAGAGGAAGAAGACTAGAAGAGCTATTACTTCTGTTTCCGGTTTTT  Raphanus sativus cv Rat-Tail Radish #3870
EW715509       --> GAGGGAGAGGAAGAAGACTAGAAGAGTTATTACATCTGTTTCCGGTTTTT  Raphanus sativus var. oleiformis
EY900830       --> GAGGGAGAGGAAGAAGACTAGAAGAGCTATTACATCTGTTTCCGTTTTTT  Raphanus raphanistrum subsp. maritimus
EY922790       --> GAGGGAGAGGAAGAAGACTAGAAGAGTTATTACATCTGTTTCCGGTTTTT  Raphanus raphanistrum subsp. landra
EY925220       --> GAGGGAGAGGAAGAAGACTAGAAGAGCTATTACATCTGTTTCCGTTTTTT  Raphanus raphanistrum subsp. landra
EW734393       --> GAGGGAGAGGAAGAAGACTAGAAGAGTTATTACATCTGTTTCCAGTTTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD965448       --> GAGGGAGAGGAAGAAGACTAGAAGAGTTATTACATCTGTTTCCGTTTTTT  Raphanus raphanistrum subsp. maritimus
FD532456       --> GAGGGAGAGGAAGAAGACTAGAAGAGCTATTACATCTGTTTCCGTTTTTT  Raphanus raphanistrum subsp. maritimus
EW734661       --> GAGGGAGAGGAAGAAGACTAGAAGAGTTATTACATCTGTTTCCGGTTTTT  Raphanus sativus cv Rat-Tail Radish #3870
EW714839       --> GAGGGAGAGGAAGAAGACTAGAAGAGCTATTACTTCTGTTTCCGGTTTTT  Raphanus sativus var. oleiformis
EX886874       --> GAGGGAGAGGAAGAAGACTAGAAGAGCTATTACTTCTGTTTCCGGTTTTT  Raphanus sativus var. oleiformis
EX896711       --> GAGGGAGAGGAAGAAGACTAGAAGAGTTATTACATCTGTTTCCGGTTTTT  Raphanus sativus cv Early Scarlet Globe

               501    -    551
UN16288        --> -GTTTTGTGTTCGTTGTTGCTCAATACTATTTATCATCGACCTTGTGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547694       <-- -GTTTTGTGTTCGTTGTTGCTCAATACTATTTATCATCGACCTTGTGTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720087       <-- -GTTTTGTGTTCGTTGTTGCTCAATAC------------TATTTATCATC  Raphanus sativus var. oleiformis
EY920741       <-- TGTTTTGTGTTCGTTGTTGCTCAATACAATTTATCATCGACCTTGTGTTC  Raphanus raphanistrum subsp. landra
EW738324       <-- -GTTTTGTGTTCGTTGTTGCTCAATACTATTTATCATCGACCTTGTGTTC  Raphanus sativus cv Rat-Tail Radish #3870
FD961188       <-- TGTTTTGTGTTCGTTGTTGCTCAATACTATTTATCATCGACCTTGTGTTC  Raphanus raphanistrum subsp. maritimus
FD528922       <-- TGTTTTGTGTTCGTTGTTGCTCAATACAATTTATCATCGACCTTGTGTTC  Raphanus raphanistrum subsp. maritimus
EW738958       <-- -GTTTTGTGTTCGTTGTTGCTCAATACTATTTATCATCGACCTTGTGTTC  Raphanus sativus cv Rat-Tail Radish #3870
FD551855       --> -GTTTTGTGTTCGTTGTTGCTCAATACTATTTATCATCGACCTTGTGTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY933591       --> -GTTTTGTGTTCGTTG---CTCAATACTATTTATCATCGACCTTGTGTTC  Raphanus sativus var. oleiformis
FD550080       --> -GTTTTGTGTTCGTTGTTGCTCAATACTATTTATCATCGACCTTGTGTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX904545       --> -GTTTTATGTTCGTTGTTGCTCAATACAATTTATCATCGCCCTTGTGTTC  Raphanus sativus cv Rat-Tail Radish #3870
FD580630       --> -GTTT-ATGTTCGTTGTTGCTCAATACAATTTATCATCGCCCTTGTGTTC  Raphanus sativus cv Rat-Tail Radish #3870
EW715509       --> -GTTTTGTGTTCGTTGTTGCTCAATACTATTTATCATC------------  Raphanus sativus var. oleiformis
EY900830       --> TGTTTTGTGTTCGTTGTTGCTCAATACAATTTATCATCGACCTTGTGTTC  Raphanus raphanistrum subsp. maritimus
EY922790       --> -GTTTTGTGTTCGTTGTTGCTCAATACTATTTATCATCGACCTTGTGTTC  Raphanus raphanistrum subsp. landra
EY925220       --> TGTTTTGTGTTCGTTGTTGCTCAATACAATTTATCATCGACCTTGTGTTC  Raphanus raphanistrum subsp. landra
EW734393       --> -GTTTTGTGTTCGTTGTTGCTCAATACTATTTATCATCGACCTTGTGTTC  Raphanus sativus cv Rat-Tail Radish #3870
FD965448       --> TGTTTTGTGTTCGTTGTTGCTCAATACTATTTATCATCGACCTTGTGTTC  Raphanus raphanistrum subsp. maritimus
FD532456       --> TGTTTTGTGTTCGTTGTTGCTCAATACAATTTATCATCGACCTTGTGTTC  Raphanus raphanistrum subsp. maritimus
EW734661       --> -GTTTTGTGTTCGTTGTTGCTCAATACTATTTATCATCGACCTTGTGTTC  Raphanus sativus cv Rat-Tail Radish #3870
EW714839       --> -GTTTTATGTTCGTTGTTGCTCAATACAATTTATCATCGCCCTTGTGTTC  Raphanus sativus var. oleiformis
EX886874       --> -GTTTTATGTTCGTTGTTGCTCAATACAATTTATCATCGCCCTTGTGTTC  Raphanus sativus var. oleiformis
EX896711       --> -GTTTTGTGTTCGTTGTTGCTCAATACTATTTATCATCGACCTTGTGTTC  Raphanus sativus cv Early Scarlet Globe

               551    -    601
UN16288        --> TTCTTTATCGACACCTTATTTTAGTTTTGTTGAAGTTACCTCTTGGTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547694       <-- TTCTTTATCGACACCTTATTTTAGTTTTGTTCAAGTTACCTCTTGGTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720087       <-- TTCTTTATCGACACCTTATTTTAGTTTTGTTGAATTTACCTCTTGGTTCA  Raphanus sativus var. oleiformis
EY920741       <-- TTCTTTATCGACACCTTATTTTAGGTTTGTTGAAGTTACCCCTTGGTTCA  Raphanus raphanistrum subsp. landra
EW738324       <-- TTCTTTATCGACCCCTTATTTTAGTTTTGTTGAATTTACCTCTTGGTTCA  Raphanus sativus cv Rat-Tail Radish #3870
FD961188       <-- TTCTTTATCGACACCTTATTTTAGTTTTGTTGAATTTACCTCTTGGTTC.  Raphanus raphanistrum subsp. maritimus
FD528922       <-- TTCTTTATCGACACCTTATTTTAGTTTTGTTGAAGTTACCc.........  Raphanus raphanistrum subsp. maritimus
EW738958       <-- TTCTTTATCGACACCTTATTTTAGTTTTGTTGAATTTACCTCTTGGTTCA  Raphanus sativus cv Rat-Tail Radish #3870
FD551855       --> TTCTTTATCGACACCTTATTTTAGTTTTGTTCAAGTTACCTCTTGGTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY933591       --> TTCTTTATCGACACCTTATTTTAGTTTTGTTCAAGTTACCTCTTGGTTCA  Raphanus sativus var. oleiformis
FD550080       --> TTCTTTATCGACACCTTATTTTAGTTTTGTTCAAGTTACCTCTTGGTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX904545       --> TTCTTTATCGACACCTTATTTTAGTTTTGTTGAAGTTACCTCTTGGTTCA  Raphanus sativus cv Rat-Tail Radish #3870
FD580630       --> TTCTTTATCGACACCTTATTTTAGTTTTGTTGAAGTTACCTCTTGGTTCA  Raphanus sativus cv Rat-Tail Radish #3870
EW715509       --> TTCTTTATCGACACCTTATTTTAGTTTTGTTGAATTTACCTCTTGGTTCA  Raphanus sativus var. oleiformis
EY900830       --> TTCTTTATCGACACCTTATTTTAGTTTTGTTGAAGTTACCCCTTGGTTCA  Raphanus raphanistrum subsp. maritimus
EY922790       --> TTCTTTATCGACACCTTATTTTAGTTTTGTTCAAGTTACCTCTTGGTTCA  Raphanus raphanistrum subsp. landra
EY925220       --> TTCTTTATCGACACCTTATTTTAGGTTTGTTGAAGTTACCCCTTGGTTCA  Raphanus raphanistrum subsp. landra
EW734393       --> TTCTTTATCGACACCTTATTTTAGTTTTGTTGAATTTACCTCTTGGTTCA  Raphanus sativus cv Rat-Tail Radish #3870
FD965448       --> TTCTTTATCGACACCTTATTTTAGTTTTGTTGAATTTACCTCTTGGTTC.  Raphanus raphanistrum subsp. maritimus
FD532456       --> TTCTTTATCGACACCTTATTTTAGTTTTGTTGAAGTTACCCCTTGGTTCA  Raphanus raphanistrum subsp. maritimus
EW734661       --> TTCTTTATCGACACCTTATTTTAGTTTTGTTGAATTTACCTCTTGGTTCA  Raphanus sativus cv Rat-Tail Radish #3870
EW714839       --> TTCTTTATCGACACCTTATTTTAGTTTTGTTGAAGTTACCTCTTGGTTCA  Raphanus sativus var. oleiformis
EX886874       --> TTCTTTATCGACACCTTATTTTAGTTTTGTGGAAGTTACCTCTTGGTTCA  Raphanus sativus var. oleiformis
EX896711       --> TTCTTTATCGACACCTTATTTTAGTTTT......................  Raphanus sativus cv Early Scarlet Globe

               601    -    651
UN16288        --> GACTATTGTTTAAGAAAAATATTTTGGTAATGATTCAAGAATCTTTTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547694       <-- GACTATTGTTTAAGAAAAATATTTTGTTAATGATTC.............
EW720087       <-- GACTATTGTTTAAGAAAAATATTTTGGTAATGATTCAAGAATCTTTc..
EY920741       <-- GACTATTGTTTAAGA..................................
EW738324       <-- GACTATTGTTTAAGAAAAATATTTTGGTAAcg.................
FD961188       <-- .................................................
FD528922       <-- .................................................
EW738958       <-- GACTATTGTTTAAGAAAAATATTTTGGTAATG.................
FD551855       --> GACTATTGTTTAAGAAAAATATTTTGTTAATGATTC.............
EY933591       --> GACTATTGTTTAAGAAAA-TATTTTGGTAATGATTCAAGAATCTTTTAA
FD550080       --> GACTATTGTTTAAGAAAAA..............................
EX904545       --> GACTATTGTTTAAGAAAAA..............................
FD580630       --> GACTATTGTTTAAGAAAAATATTTTGGTAATGg................
EW715509       --> GACTATTGTTTAAGAAAAATATTTTGGTAATGATTCAAGAATCTTTc..
EY900830       --> GACTATTGTTTAAGAAAAA..............................
EY922790       --> GACTATTGTTTAAGAAAA-TATTTTGGTAATGATTCAAGAATCTTT...
EY925220       --> GACTATTGTTTAAGA..................................
EW734393       --> GACTATTGTTTAAGAAAAATATTTTGGTAAcg.................
FD965448       --> .................................................
FD532456       --> GACTATTGTTTAAGAAAAAT.............................
EW734661       --> GACTATTGTTTAAGAAAAATATTTTGGTAATG.................
EW714839       --> GACTATTGTTTAAGAAtattttggt........................
EX886874       --> GACTATTGTTTAAGAAAAA..............................
EX896711       --> .................................................