RadishBase

| | | |
Alignment for radish unigene UN16289

               1      -     51
UN16289        --> GTGGATGACGTTGCTCAGGCCGTGAACTCGGCTCTTAAAATGAGTGAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919501       <-- ..................................................
FY445968       <-- ..................................................
FY442914       <-- ..................................................
EV531182       <-- ..................................................
EY945307       <-- ..................................................
EY928934       <-- ..................................................
EW720280       <-- ..................................................
FD566262       <-- ..................................................
EX758669       <-- ..................................................
EY911916       <-- ..................................................
EX901754       <-- ..................................................
EY949870       --> GTGGATGACGTTGCTCAGGCCGTGAACTCGGCTCTTAAAATGAGTGAAGC
EY923746       --> ..................................................
EY916194       --> ..................................................
FD578941       --> ..................................................
EV536568       --> ..................................................
EV526787       --> ..................................................
FD986449       --> ..................................................
EX754315       --> ..................................................
EX898128       --> ..................................................

               51     -    101
UN16289        --> TGAGAAGCAGCTGAGGCATGAGAAGCATTATGACTATATCAGCACTCATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919501       <-- ..................................................
FY445968       <-- ..................................................
FY442914       <-- ..................................................
EV531182       <-- ..................................................
EY945307       <-- ..................................................
EY928934       <-- ..................................................
EW720280       <-- ..................................................
FD566262       <-- ..................................................
EX758669       <-- ..................................................
EY911916       <-- ..................................................
EX901754       <-- ..................................................
EY949870       --> TGAGAAGCAGCTGAGGCATGAGAAGCATTATGACTATATCAGCACTCATG
EY923746       --> ..................................................
EY916194       --> ..................................................
FD578941       --> ..................................................
EV536568       --> ..................................................
EV526787       --> ..................................................
FD986449       --> ..................................................
EX754315       --> ..................................................
EX898128       --> ..................................................

               101    -    151
UN16289        --> ATGTTGGTTACTGGGCGAAGAGCTTTATGCAGGATCTTGAGAGGGCTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919501       <-- ..................................................
FY445968       <-- ..................................................
FY442914       <-- ..................................................
EV531182       <-- ..................................................
EY945307       <-- ..................................................
EY928934       <-- ..................................................
EW720280       <-- ..................................................
FD566262       <-- ..................................................
EX758669       <-- ..................................................
EY911916       <-- ..................................................
EX901754       <-- ..................................................
EY949870       --> ATGTTGGTTACTGGGCGAAGAGCTTTATGCAGGATCTTGAGAGGGCTTGC
EY923746       --> ..................................................
EY916194       --> ..................................................
FD578941       --> ..................................................
EV536568       --> ..................................................
EV526787       --> ..................................................
FD986449       --> ..................................................
EX754315       --> ..................................................
EX898128       --> ..................................................

               151    -    201
UN16289        --> AAGGATCATTACAGTAAACGTTGCTGGGGGATTGGGTTTGGATTAGGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919501       <-- ..................................................
FY445968       <-- ..................................................
FY442914       <-- ..................................................
EV531182       <-- ..................................................
EY945307       <-- ..................................................
EY928934       <-- ..................................................
EW720280       <-- ..................................................
FD566262       <-- ..................................................
EX758669       <-- ..................................................
EY911916       <-- ..................................................
EX901754       <-- ..................................................
EY949870       --> AAGGATCATTACAGTAAACGTTGCTGGGGGATTGGGTTTGGATTAGGGTT
EY923746       --> ..................................................
EY916194       --> ..................................................
FD578941       --> ..................................................
EV536568       --> ..................................................
EV526787       --> ..................................................
FD986449       --> ..................................................
EX754315       --> ..................................................
EX898128       --> ..................................................

               201    -    251
UN16289        --> TAGGGTTTTGTCGCTTTCCCCTAGCTTTAGGAAGCTCTCTGTGGAACACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919501       <-- ..................................................
FY445968       <-- ..................................................
FY442914       <-- ..................................................
EV531182       <-- ..................................................
EY945307       <-- ..................................................
EY928934       <-- ..................................................
EW720280       <-- ..................................................
FD566262       <-- ..................................................
EX758669       <-- ..................................................
EY911916       <-- ..................................................
EX901754       <-- ..................................................
EY949870       --> TAGGGTTTTGTCGCTTTCCCCTAGCTTTAGGAAGCTCTCTGTGGAACACA
EY923746       --> ..................................................
EY916194       --> ..................................................
FD578941       --> ..................................................
EV536568       --> ..................................................
EV526787       --> ..................................................
FD986449       --> ..................................................
EX754315       --> ..................................................
EX898128       --> ..................................................

               251    -    301
UN16289        --> TTGTTCCTGTTTATAGAAAAGCGCAGAGGAGAGCTATCTTTCTTGATTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919501       <-- ...........................................ctgaTAT
FY445968       <-- ..................................................
FY442914       <-- ..................................................
EV531182       <-- ..................................................
EY945307       <-- ..................................................
EY928934       <-- ..................................................
EW720280       <-- ..................................................
FD566262       <-- ..................................................
EX758669       <-- ..................................................
EY911916       <-- ..................................................
EX901754       <-- ..................................................
EY949870       --> TTGTTCCTGTTTATAGAAAAGCGCAGAGGAGAGCTATCTTTCTTGATTAT
EY923746       --> .........................ggGGAGAGCTATCTTTCTTGATTAT
EY916194       --> ..................................................
FD578941       --> ..................................................
EV536568       --> ..................................................
EV526787       --> ..................................................
FD986449       --> ..................................................
EX754315       --> ..................................................
EX898128       --> ..................................................

               301    -    351
UN16289        --> GATGGCACTCTTGTCCCTGAAAGCTCCATTACTCAAGATCCAAGCGCTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919501       <-- GATG-CACTCT-GT-CCTG-AAGCTCCAT-ACTCAAGATCCA-GCGCTGA
FY445968       <-- ...................................gGATCCAAGCGCTGA
FY442914       <-- ..................................................
EV531182       <-- ..................................................
EY945307       <-- ..................................................
EY928934       <-- ..................................................
EW720280       <-- ..................................................
FD566262       <-- ..................................................
EX758669       <-- ..................................................
EY911916       <-- ..................................................
EX901754       <-- ..................................................
EY949870       --> GATGGTACTCTTGTCCCTGAAAGCTCCATTACTCAGGATCCAAGCGCTGA
EY923746       --> GATGGCACTCTTGTCCCTGAAAGCTCCATTACTCAAGATCCAAGCGCTGA
EY916194       --> ......................GCTCCATTACTCAAGATCCAAGCGCTGA
FD578941       --> ..................................................
EV536568       --> ..................................................
EV526787       --> ..................................................
FD986449       --> ..................................................
EX754315       --> ..................................................
EX898128       --> ..................................................

               351    -    401
UN16289        --> GGTTTTGTCTGTTCTGAAGGCTCTTTGTGATGATGCTAAGAACACTGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919501       <-- GGTTT-GTCT-TTCTAAAGGCTCTTTGTGAGGATGCTAAGAACACTGTGT  Raphanus raphanistrum subsp. landra
FY445968       <-- GGTTTTGTCTGTTCTGAAGGCTCTTTGTGATGATGCTAAGAACACTGTGT  Raphanus sativus cv GSK3-1
FY442914       <-- .........................TGTGATGATGCTAAGAACACTGTGT  Raphanus sativus cv GSK3-1
EV531182       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY945307       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY928934       <-- ..................................................  Raphanus sativus var. oleiformis
EW720280       <-- ..................................................  Raphanus sativus var. oleiformis
FD566262       <-- ..................................................  Raphanus sativus var. oleiformis
EX758669       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY911916       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901754       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY949870       --> GGTTTTGTCTGTTCTGAAGGCTCTTTGTGATGATGCTAAGAACACTGTGT  Raphanus sativus cv Rat-Tail Radish #3870
EY923746       --> GGTTTTGTCTGTTCTAAAGGCTCTTTGTGAGGATGCTAAGAACACTGTGT  Raphanus raphanistrum subsp. landra
EY916194       --> GGTTTTGTCTGTTCTAAAGGCTCTTTGTGAGGATGCTAAGAACACTGTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD578941       --> .............CTGAAGGCTCTTTGTGATGATGCTAAGAACACTGTGT  Raphanus sativus cv Rat-Tail Radish #3870
EV536568       --> .........................TGTGAAGATACTAAGAACACTGTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV526787       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD986449       --> ..................................................  Raphanus raphanistrum subsp. landra
EX754315       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX898128       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               401    -    451
UN16289        --> TTATTGTTAGTGGGAGAGGACCGGAGTCTTTGAGCGAGTGGTTGTCTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919501       <-- TTATTGTTAGTGGGAGAGGACCGGAGTCTTTGAGCGAGTGGTTGTCTCCT  Raphanus raphanistrum subsp. landra
FY445968       <-- TTATTGTTAGTGGGAGAGGACCAGAGTCTTTGAGCGAGTGGTTGTCTCCT  Raphanus sativus cv GSK3-1
FY442914       <-- TTATTGTTAGTGGGAGAGGACCAGAGTCTTTGAGCGAGTGGTTGTCTCCT  Raphanus sativus cv GSK3-1
EV531182       <-- ...............GAGGACCGGAGTCTTTGAGCGAGTGGTTGTCTCCT  Raphanus raphanistrum subsp. maritimus
EY945307       <-- ................AGGACCAGAGTCTTTGAGCGAGTGGTTGTCTCCT  Raphanus sativus cv Rat-Tail Radish #3870
EY928934       <-- ..................................................  Raphanus sativus var. oleiformis
EW720280       <-- ..................................................  Raphanus sativus var. oleiformis
FD566262       <-- ..................................................  Raphanus sativus var. oleiformis
EX758669       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY911916       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901754       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY949870       --> TTATTGTTAGTGGGAGAGGACCAGAGTCTTTGAGCGAGTGGTTGTCTCCT  Raphanus sativus cv Rat-Tail Radish #3870
EY923746       --> TTATTGTTAGTGGGAGAGGACCGGAGTCTTTGAGCGAGTGGTTGTCTCCT  Raphanus raphanistrum subsp. landra
EY916194       --> TTATTGTTAGTGGGAGAGGACCGGAGTCTTTGAGCGAGTGGTTGTCTCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD578941       --> TTATTGTTAGTGGGAGAGGACCAGAGTCTTTGAGCGAGTGGTTGTCTCCT  Raphanus sativus cv Rat-Tail Radish #3870
EV536568       --> TTATTGTTAGTGGGAGAGGACCGGAGTCTTTGAGCGAGTGGTTGTCTCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV526787       --> ...............GAGGACCGGAGTCTTTGAGCGAGTGGTTGTCTCCT  Raphanus raphanistrum subsp. maritimus
FD986449       --> ..................................................  Raphanus raphanistrum subsp. landra
EX754315       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX898128       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               451    -    501
UN16289        --> TGTGAGAATCTTGGAATAGCTGCTGAACATGGATACTTCATAAGGTGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919501       <-- TGTGAGAATCTTGGTATAGCTGCTGAACATGGATACTTCATAAGGTGTAA  Raphanus raphanistrum subsp. landra
FY445968       <-- TGTGAGAATCTTGGAATAGCTGCTGAACATGGATACTTCATAAGGTGGAA  Raphanus sativus cv GSK3-1
FY442914       <-- TGTGAGAATCTTGGAATAGCTGCTGAACATGGATACTTCATAAGGTGGAA  Raphanus sativus cv GSK3-1
EV531182       <-- TGTGAGAATCTTGGAATAGCTGCTGAACATGGATACTTCATAAGGTGGAA  Raphanus raphanistrum subsp. maritimus
EY945307       <-- TGTGAGAATCTTGGAATAGCTGCTGAACATGGATACTTCATAAGGTGGAA  Raphanus sativus cv Rat-Tail Radish #3870
EY928934       <-- ..TGAGAATCTTGGTATAGCTGCTGAACATGTATACTTCATAAGGTGGAA  Raphanus sativus var. oleiformis
EW720280       <-- ..................................................  Raphanus sativus var. oleiformis
FD566262       <-- ..................................................  Raphanus sativus var. oleiformis
EX758669       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY911916       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901754       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY949870       --> TGTGAGAATCTTGGAATAGCTGCTGAACATGGATACTTCATAAGGTGGAA  Raphanus sativus cv Rat-Tail Radish #3870
EY923746       --> TGTGAGAATCTTGGTATAGCTGCTGAACATGGATACTTCATAAGGTGTAA  Raphanus raphanistrum subsp. landra
EY916194       --> TGTGAGAATCTTGGAATAGCTGCTGAACATGGATACTTCATAAGGTGGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD578941       --> TGTGAGAATCTTGGAATAGCTGCTGAACATGGATACTTCATAAGGTGGAA  Raphanus sativus cv Rat-Tail Radish #3870
EV536568       --> TGTGAGAATCTTGGTATAGCTGCTGAACATGGATACTTCATAAGGTGGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV526787       --> TGTGAGAATCTTGGAATAGCTGCTGAACATGGATACTTCATAAGGTGGAA  Raphanus raphanistrum subsp. maritimus
FD986449       --> ..................................................  Raphanus raphanistrum subsp. landra
EX754315       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX898128       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               501    -    551
UN16289        --> TAGCAAGAAAGAGTGGGAGACTTGTTACTCGTCTACGGGTACAGAGTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919501       <-- TAGCAAGAAAGAGTGGGAGACTTGTTACTCGTCTACGGGTACAGAGTGGA
FY445968       <-- TAGCAAGAAAGAGTGGGAGACTTGTTATTCGTCTACGGGTACAGAGTGGA
FY442914       <-- TAGCAAGAAAGAGTGGGAGACTTGTTATTCGTCTACGGGTACAGAGTGGA
EV531182       <-- TAGCAAGAAAGAGTGGGAGACTTGTTACTCGTCTACGGGTACAGAGTGGA
EY945307       <-- TAGCAAGAAAGAGTGGGAGACTTGTTACTCGTCTACGGGTACAGAGTGGA
EY928934       <-- TAGCAAGAAAGAGTGGGAGACTTGTTACTCGTCTACGGGTACAGAGTGGA
EW720280       <-- ..................................ACGGGTACAGAGTGGA
FD566262       <-- ..................................ACGGGTACAGAGTGGA
EX758669       <-- ..................................................
EY911916       <-- ..................................................
EX901754       <-- ..................................................
EY949870       --> TAGCAAGAAAGAGTGGGAGACTTGTTACTCGTCTACGGGTACAGAGTGGA
EY923746       --> TAGCAAGAAAGAGTGGGAGACTTGTTACTCGTCTACGGGTACAGAGTGGA
EY916194       --> TAGCAAGAAAGAGTGGGAGACTTGTTACTCGTCTACGGGTACAGAGTGGA
FD578941       --> TAGCAAGAAGGAGTGGGAGACTTGTTACTCGTCTACGGGTACAGAGTGGA
EV536568       --> TAGCAAGAAAGAGTGGGAGACTTGTTACTCGTCAACGGGTACAGAGTGGA
EV526787       --> TAGCAAGAAAGAGTGGGAGACTTGTTACTCGTCTACGGGTACAGAGTGGA
FD986449       --> ...............GGAGACTTGTTACTCGTCTACGGGTACAGAGTGGA
EX754315       --> ..................................................
EX898128       --> ..................................................

               551    -    601
UN16289        --> AGGCAATGGTGGAGCCTGTGATGAGATCATACATGGAGGCAACAGATGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919501       <-- AGGCAATGGTGGAGCCTGTGATGAGATCATACATGGAGGCAACAGATGGG  Raphanus raphanistrum subsp. landra
FY445968       <-- AGGCAATGGTGGAGCCTGTGATGAGATCATACATGGAGGCAACAGATGGG  Raphanus sativus cv GSK3-1
FY442914       <-- AGGCAATGGTGGAGCCTGTGATGAGATCATACATGGAGGCAACAGATGGG  Raphanus sativus cv GSK3-1
EV531182       <-- AGGCAACGGTGGAGCCTGTTATGAGATCATACATGGAGGCAACAGATGGG  Raphanus raphanistrum subsp. maritimus
EY945307       <-- AGGCAATGGTGGAGCCTGTTATGAGATCATACATGGAGGCAACAGATGGG  Raphanus sativus cv Rat-Tail Radish #3870
EY928934       <-- AGGCAATGGTGGAGCCTGTGATGAGATCATACATGGAGGCAACAGATGGG  Raphanus sativus var. oleiformis
EW720280       <-- AGGCAATGGTGGAGCCTGTTATGAGATCATACATGGAGTCAACAGATGGG  Raphanus sativus var. oleiformis
FD566262       <-- AGGCAATGGTGGAGCCTGTGATGAGATCATACATGGAGGCAACAGATGGG  Raphanus sativus var. oleiformis
EX758669       <-- ..........................................gAGATGGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY911916       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901754       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY949870       --> AGGCAATGGTGGAGCCTGTTATGAGATCATACATGGAGGCAACAGATGGG  Raphanus sativus cv Rat-Tail Radish #3870
EY923746       --> AGGCAATGGTGGAGCCTGTGATGAGATCATACATGGAGGCAACAGATGGG  Raphanus raphanistrum subsp. landra
EY916194       --> AGACAATGGTGGAGCCTGTTATGAGATCATACATGGAGGCAACAGATGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD578941       --> AGGCAATGGTGGAGCCTGTTATGAGATCATACATGGAGGCAACAGATGGG  Raphanus sativus cv Rat-Tail Radish #3870
EV536568       --> AGGCAATGGTGGAGCCTGTGATGAGATCATACATGGAGGCAACAGATGGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV526787       --> AGGCAACGGTGGAGCCTGTTATGAGATCATACATGGAGGCAACAGATGGG  Raphanus raphanistrum subsp. maritimus
FD986449       --> AGGCAATGGTGGAGCCTGTGATGAGATCATACATGGAGGCAACAGATGGG  Raphanus raphanistrum subsp. landra
EX754315       --> ..........................................gAGATGGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX898128       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               601    -    651
UN16289        --> TCTAGTATAGAGTTTAAAGAGAGTGCTCTTGTGTGGCATCATCAAGATGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919501       <-- TCTAGTATAGAGTTTAAAGAGAATGCTCTTGTGTGGCATCATCATGATGC  Raphanus raphanistrum subsp. landra
FY445968       <-- TCTAGTATAGAGTTTAAAGAGAGTGCTCTTGTGTGGCATCATCAAGATGC  Raphanus sativus cv GSK3-1
FY442914       <-- TCTAGTATAGAGTTTAAAGAGAGTGCTCTTGTGTGGCATCATCAAGATGC  Raphanus sativus cv GSK3-1
EV531182       <-- TCTAGTATAGAGTTTAAAGAGAGTGCTCTTGTGTGGCATCATCAAGATGC  Raphanus raphanistrum subsp. maritimus
EY945307       <-- TCGAGTATAGAGTTTAAAGAGAGTGCTCTTGTGTGGCATCATCAGGATGC  Raphanus sativus cv Rat-Tail Radish #3870
EY928934       <-- TCTAGTATAGAGTTTAAAGAGAGTGCTCTTGTGTGGCATCATCAAGATGC  Raphanus sativus var. oleiformis
EW720280       <-- TTTAGTATAGAGTTTAAAGAGAGTGCTCTTGTGTGGCATCATCAAGATGC  Raphanus sativus var. oleiformis
FD566262       <-- TCTAGTATAGAGTTTAAAGAGAGTGCTCTTGTGTGGCATCATCAAGATGC  Raphanus sativus var. oleiformis
EX758669       <-- TCGAGTATAGAGTTTAAAGAGAGTGCTCTTGTGTGGCATCATCAGGATGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY911916       <-- ..........................TCTTGTGTGGCATCATCAAGATGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901754       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY949870       --> TCGAGTATAGAGTTTAAAGAGAGTGCTCTTGTGTGGCATCA.........  Raphanus sativus cv Rat-Tail Radish #3870
EY923746       --> TCTAGTATAGAGTTTAAAGAGAATGCTCTTGTGTGGCATCATCATGATGC  Raphanus raphanistrum subsp. landra
EY916194       --> TCTAGTATAGAGTTTAAAGAGAGTGCTCTTGTGTGGCATCATCAAGATGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD578941       --> TCGAGTATAGAGTTTAAAGAGAGTGCTCTTGTGTGGCATCATCAGGATGC  Raphanus sativus cv Rat-Tail Radish #3870
EV536568       --> TCGGGTATAGAGTTTAAAGAGAGTGCTCTTGTGTGGCATCATCAGGATGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV526787       --> TCTAGTATAGAGTTTAAAGAGAGTGCTCTTGTGTGGCATCATCAAGATGC  Raphanus raphanistrum subsp. maritimus
FD986449       --> TCTAGTATAGAGTTTAAAGAGAGTGCTCTTGTGTGGCATCATCAAGATGC  Raphanus raphanistrum subsp. landra
EX754315       --> TCGAGTATAGAGTTTAAAGAGAGTGCTCTTGTGTGGCATCATCAGGATGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX898128       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               651    -    701
UN16289        --> TGATCCGGACTTTGGATCTTGTCAAGCTAAGGAGCTTCTTGATCATCTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919501       <-- TGATCCGGACTTTGGATCTTGTCAAGCTAAGGAGCTTCTTGATCATCTAG
FY445968       <-- TGATCCGGACTTTGGATCTTGTCAAGCTAAGGAGCTTCTTGATCATCTAG
FY442914       <-- TGATCCGGACTTTGGATCTTGTCAAGCTAAGGAGCTTCTTGATCATCTAG
EV531182       <-- TGATCCGGACTTTGGATCTTGTCAAGCTAAGGAGCTTCTTGATCATCTAG
EY945307       <-- TGATCCGGACTTTGGATCTTGTCAAGCTAAGGAGCTTCTTGATCATCTAG
EY928934       <-- TGATCCGGACTTTGGATCTTGTCAAGCTAAGGAGCTTCTTGATCATCTAG
EW720280       <-- TGATCCGGACTTTGGATCTTGTCAAGCTAAGGAGCTTCTTGATCATCTAG
FD566262       <-- TGATCCGGACTTTGGATCTTGTCAAGCTAAGGAGCTTTTTGATCATTTAG
EX758669       <-- TGATCCGGACTTTGGATCTTGTCAAGCTAAGGAGCTTCTTGATCATCTAG
EY911916       <-- TGATCCGGACTTTGGATCTTGTCAAGCTAAGGAGCTTCTTGATCATCTAG
EX901754       <-- ..................................................
EY949870       --> ..................................................
EY923746       --> TGATCCGGACTTTGGATCTTGTCAAGCTAAGGAGCTTCTTGATCATCTAG
EY916194       --> TGATCCGGACTTTGGATCTTGTCAAGCTAAGGAGCTTCTTGATCATCTAG
FD578941       --> TGATCCGGACTTTGGATCTTGTCAAGCTAAGGGGCTTCTTGATCATCTAG
EV536568       --> TGATCCGGACTTTGGATCTTGTCAAGCT......................
EV526787       --> TGATCCGGACTTTGGATCTTGTCAAGCTAAGGAGCTTCTTGATCATCTAG
FD986449       --> TGATCCGGACTTTGGATCTTGTCAAGCTAAGGAGCTTCTTGATCATCTAG
EX754315       --> TGATCCGGACTTTGGATCTTGTCAAGCTAAGGAGCTTCTTGATCATCTAG
EX898128       --> ..................................................

               701    -    751
UN16289        --> AGAGCGTGCTTGCGAATGAGCCTGTTGTTGTCAAGAGAGGTCAACACATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919501       <-- AGAGCGTGCTTGCGAATGAGCCTGTTGTTGTCAAGAGAGGTCAACACATC  Raphanus raphanistrum subsp. landra
FY445968       <-- AGAGTGTGCTTGCGAATGAGCCCGTTGTTGTCAAGAGAGGTCAACACATT  Raphanus sativus cv GSK3-1
FY442914       <-- AGAGTGTGCTTGCGAATGAGCCCGTTGTTGTCAAGAGAGGTCAACACATT  Raphanus sativus cv GSK3-1
EV531182       <-- AGAGCGTGCTTGCGAATGAGCCTGTTGTTGTCAAGAGAGGTCAACACATC  Raphanus raphanistrum subsp. maritimus
EY945307       <-- AGAGCGTGCTTGCGAATGAGCCTGTTGTTGTCAAGAGAGGTCAACACATC  Raphanus sativus cv Rat-Tail Radish #3870
EY928934       <-- AGAGTGTGCTTGCGAATGAGCCTGTTGTTGTCAAGAGAGGTCAACACATT  Raphanus sativus var. oleiformis
EW720280       <-- AGAGCGTGCTTGCGAATGAGCCTGTTGTTGTCAAGAGAGGTCAACACATC  Raphanus sativus var. oleiformis
FD566262       <-- AGAGTGTGCTTGCGAATGAGCCTGTTGTTGTCAAGAGAGGTCAACACATT  Raphanus sativus var. oleiformis
EX758669       <-- AGAGTGTGCTTGCGAATGAGCCTGTTGTTGTCAAGAGAGGTCAACACATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY911916       <-- AGAGCGTGCTTGCGAATGAGCCTGTTGTTGTCAAGAGAGGTCAACACATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901754       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY949870       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY923746       --> AGAGCGTGCTTGCGAATGAGCCTGTTGTTGTCAAGAGAGGTCAACACATC  Raphanus raphanistrum subsp. landra
EY916194       --> AGAGCGTGCTTGCGAATGAGCCTGTTGTTGTCAAGAGAGGTCAACACATT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD578941       --> AGAGCGTGCTTGCGAATGAGCCTGTTGTTGTCAAGAGAGGTCAACACATC  Raphanus sativus cv Rat-Tail Radish #3870
EV536568       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV526787       --> AGAGCGTGCTTGCGAATGAGCCTGTTGTTGTCAAGAGAGGTCAACACATC  Raphanus raphanistrum subsp. maritimus
FD986449       --> AGAGCGTGCTTGCGAATGAGCCTGTTGTTGTCAAGAGAGGTCAACACATC  Raphanus raphanistrum subsp. landra
EX754315       --> AGAGTGTGCTTGCGAATGAGCCTGTTGTTGTCAAGAGAGGTCAACACATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX898128       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               751    -    801
UN16289        --> GTTGAAGTAAAACCACAGGGTGTAAGCAAAGGTCTAGCTTGTGAGAAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919501       <-- GTTGAAGTAAAACCACAGGGTGTAAGCAAAGGTCTAGCTTGTGAGAAAGT
FY445968       <-- GTTGAAGTAAAACCACAGGGTGTAAGCAAAGGTCTAGCTTGTGAGAAAGT
FY442914       <-- GTTGAAGTAAAACCACAGGGTGTAAGCAAAGGTCTAGCTTGTGAGAAAGT
EV531182       <-- GTTGAAGTAAAACCACAGGGTGTAAGCAAAGGTCTAGCTTGTGAGAAAGT
EY945307       <-- GTTGAAGTAAAACCACAGGGTGTAAGCAAAGGTCTAGCTTGTGAGAAAGT
EY928934       <-- GTTGAAGTAAAACCACAGGGTGTAAGCAAAGGTCTAGCTTGTGAGAAAGT
EW720280       <-- GTTGAAGTAAAACCACAGGGTGTAAGCAAAGGTCTAGCTTGTGAGAAAGT
FD566262       <-- GTTGAAGTAAAACCACAGGGTGTAAGCAAAGGTCTAGCTTGTGAGAAAGT
EX758669       <-- GTTGAAGTAAAACCACAGGGTGTAAGCAAAGGTCTAGCTTGTGAGAAAGT
EY911916       <-- GTTGAAGTAAAACCACAGGGTGTAAGCAAAGGTCTAGCTTGTGAGAAAGT
EX901754       <-- .................................gTAGCTTGTGAGAAAGT
EY949870       --> ..................................................
EY923746       --> GTTGAAGTAAAACCACAGGGTGTAAGCAAAGGTCTAGCTTGTGAGAAAGT
EY916194       --> GTTGAAGTAAAACCACAGGGTGTAAGCAAAGGTCTAGCTTGTGAGAAAGT
FD578941       --> GTTGAAGTAAAACCACAGGGTGTAAGCAAAGGTCTAGCTTGTGAGAAAGT
EV536568       --> ..................................................
EV526787       --> GTTGAAGTAAAACCACAGGGTGTAAGCAAAGGTCTAGCTTGTGAGAAAGT
FD986449       --> GTTGAAGTAAAACCACAGGGTGTAAGCAAAGGTCTAGCTTGTGAGAAAGT
EX754315       --> GTTGAAGTAAAACCACAGGGTGTAAGCAAAGGTCTAGCTTGTGAGAAAGT
EX898128       --> .................................gTAGCTTGTGAGAAAGT

               801    -    851
UN16289        --> AATCAGAGGAATGGTTGAACGTGGGGAACCGCCAGAGATGGTGATATGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919501       <-- AATCAGAGGAATGGTTGAACGTGGGGAACCGCCAGAGATGGTGATATGCA
FY445968       <-- AATCAGAGGAATGGTTGAACGTGGGGAACCGCCAGAGATGGTGATATGCA
FY442914       <-- AATCAGAGGAATGGTTGAACGTGGGGAACCGCCAGAGATGGTGATATGCA
EV531182       <-- AATCAGAGGAATGGTTGAACGTGGGGAACCGCCAGAGATGGTGATATGCA
EY945307       <-- AATCAGAGGAATGGTTAAACGTGGGGAACCGCCAGAGATGGTGATATGCA
EY928934       <-- AATCAGAGGAATGGTTGAACGTGGGGAACCGCCAGAGATGGTGATATGCA
EW720280       <-- AATCAGAGGAATGGTTGAACGTGGGGAACCGCCAGAGATGGTGATATGCA
FD566262       <-- AATCAGAGGAATGGTTGAACGTGGGGAACCCCCAGAGATGGTGATATGCA
EX758669       <-- GATCAGAGGAATGGTTGAACGTGGGGAACCGCCAGAGATGGTGATATGCA
EY911916       <-- AATCAGAGGAATGGTTGAACGTGGGGAACCGCCAGAGATGGTGATATGCA
EX901754       <-- AATCAGAGTAATGGTTGAACGTGGGGAACCCCCAGAAATGGTGATATGCA
EY949870       --> ..................................................
EY923746       --> AATCAGAGGAATGGTTGAACGTGGGGAACCGCCAGAGATGGTGATATGCA
EY916194       --> AATCAGAGGAATGGTTGAACGTGGGGAACCGCCAGAGATGGTGATATGCA
FD578941       --> AATCAGAGGAATGGTTGAACGTGGTGAACCGCCAGAGATGGTGATATGCA
EV536568       --> ..................................................
EV526787       --> AATCAGAGGAATGGTTGAACGTGGGGAACCGCCAGAGATGGTGATATGCA
FD986449       --> AATCAGAGGAATGGTTGAACGTGGTGAACCGCCAGAGATGGTGATATGCA
EX754315       --> GATCAGAGGAATGGTTGAACGTGGGGAACCGCCAGAGATGGTGATATGCA
EX898128       --> AATCAGAGTAATGGTTGAACGTGGGGAACCGCCAGAAATGGTGATATGCA

               851    -    901
UN16289        --> TAGGAGATGATAGGTCGGATGAGGATATGTTTGAGGGTATGTTGAGTACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919501       <-- TAGGAGATGATAGGTCGGATGAGGATATGTTTGAGGGTATGTTGAGTACT  Raphanus raphanistrum subsp. landra
FY445968       <-- TAGGAGATGATAGGTCGGATGAGGATATGTTTGAGGGTATGTTGAGTACA  Raphanus sativus cv GSK3-1
FY442914       <-- TAGGAGATGATAGGTCGGATGAGGATATGTTTGAGGGTATGTTGAGTACA  Raphanus sativus cv GSK3-1
EV531182       <-- TAGGAGATGATAGGTCGGATGAGGATATGTTTGAGGGTATGTTGAGTACT  Raphanus raphanistrum subsp. maritimus
EY945307       <-- TAGGAGATGATAGGTCGGATGAGGATATGTTTGAGGGTATGTTGAGTACT  Raphanus sativus cv Rat-Tail Radish #3870
EY928934       <-- TAGGAGATGATAGGTCGGATGAGGATATGTTTGAGGGTATGTTGAGTACA  Raphanus sativus var. oleiformis
EW720280       <-- TAGGAGATGATAGGTCGGATGAGGATATGTTTGAGGGTATGTTGAGTACT  Raphanus sativus var. oleiformis
FD566262       <-- TAGGAGATGATAGGTCGGATGAGGATATGTTTGAGGGTATGTTGAGTACA  Raphanus sativus var. oleiformis
EX758669       <-- TAGGAGATGATAGGTCGGATGAGGATATGTTTGAGGGTATGTTGAGTACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY911916       <-- TAGGAGATGATAGGTCGGATGAGGATATGTTTGAGGGTATGTTGAGTACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901754       <-- TAGGAGATGATAGGTCGGATGAGGATATGTTTGAGGGTCTGTTGAGTACA  Raphanus sativus cv Early Scarlet Globe
EY949870       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY923746       --> TAGGAGATGATAGGTCGGATGAGGATATGTTTGAGGGTATGTTGAGTACT  Raphanus raphanistrum subsp. landra
EY916194       --> TAGGAGATGATAGGTCGGATGAGGATATGTTTGAGGGTATGTTGAGTACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD578941       --> TAGGAGATGATAGGTCGGATGAGGATATGTTTGAGGGTATGTTGAGTACT  Raphanus sativus cv Rat-Tail Radish #3870
EV536568       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV526787       --> TAGGAGATGATAGGTCGGATGAGGATATGTTTGAGGGTATGTTGAGTACT  Raphanus raphanistrum subsp. maritimus
FD986449       --> TAGGAGATGATAGGTCGGATGAGGATATGTTTGAGGGTATGCTGAGTACT  Raphanus raphanistrum subsp. landra
EX754315       --> TAGGAGATGATAGGTCGGATGAGGATATGTTTGAGGGTATGTTGAGTACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX898128       --> TAGGAGATGATAGGTCGGATGAGGATATGTTTGAGGGTCTGTTGAGTACA  Raphanus sativus cv Early Scarlet Globe

               901    -    951
UN16289        --> GTGACGAATCCAGAGCTTCTGATTCAGCCAGAGGTTTTTGCCTGCACTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919501       <-- GTGACGAATCCAGAGCTTCTGATTCAGCCAGAGGCTTTTGCCTGCACTGT  Raphanus raphanistrum subsp. landra
FY445968       <-- GTGACCAATCCAGAGCTTCTGATTCAGCCAGAGGTTTTTGCCTGTACTGT  Raphanus sativus cv GSK3-1
FY442914       <-- GTGACCAATCCAGAGCTTCTGATTCAGCCAGAGGTTTTTGCCTGTACTGT  Raphanus sativus cv GSK3-1
EV531182       <-- GTGACGAATCCAGAGCTTCTGATTCAGCCAGGGGTTTTTGCCTGCACTGT  Raphanus raphanistrum subsp. maritimus
EY945307       <-- GTGACGAATCCAGAGCTTCTGATTCAGCCAGAGGTTTTTGCCTGCACTGT  Raphanus sativus cv Rat-Tail Radish #3870
EY928934       <-- GTGACCAATCCAGAGCTTTTGATTCAGCCAGAGGTTTTTGCCTGTACTGT  Raphanus sativus var. oleiformis
EW720280       <-- GTGACGAATCCAGAGCTTTTGATTCAGCCAGAGGTTTTTGCCTGCACTGT  Raphanus sativus var. oleiformis
FD566262       <-- GTGACCAATCCAGAGCTTTTGATTCAGCCAGAGGTTTTTGCCTGTACTGT  Raphanus sativus var. oleiformis
EX758669       <-- GTGACAAATCCAGAGCTTTTGATTCAGCCAGAGGTTTTTGCCTGCACTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY911916       <-- GTGACCAATCCAGAGTTTTTGATTCAGTCAGAGGTTTTTGCCTGTACTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901754       <-- GTGACCAATCCAGAGTTTTTGATTCAGCCAGAGGTTTTTGCCTGTACTGT  Raphanus sativus cv Early Scarlet Globe
EY949870       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY923746       --> GTGACGAATCCAGAGCTTCTGATTCAGCCAGAGGCTTTTGCCTGCACTGT  Raphanus raphanistrum subsp. landra
EY916194       --> GTGACCAATCCAGAGTTTCTGATTCAGTCAGAGGTTTTTGCCTGTACTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD578941       --> GTGACGAATCCAGAGCTTCTGATTCAGCCAGAGGTTTTTGCCTGCACTGT  Raphanus sativus cv Rat-Tail Radish #3870
EV536568       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV526787       --> GTGACGAATCCAGAGCTTCTGATTCAGCCAGGGGTTTTTGCCTGCACTGT  Raphanus raphanistrum subsp. maritimus
FD986449       --> GTGACGAATCCAGAGCTTCTGATTCAGCCAGAGGTTTTTGCCTGCACTGT  Raphanus raphanistrum subsp. landra
EX754315       --> GTGACAAATCCAGAGCTTCTGATTCAGCCAGAGGTTTTTGCCTGCACTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX898128       --> GTGACCAATCCAGAGTTTCTGATTCAGCCAGAGGTTTTTGCCTGTACTGT  Raphanus sativus cv Early Scarlet Globe

               951    -   1001
UN16289        --> TGGGAGAAAACCAAGTAAGGCTAAGTACTTTTTGGATGATGTAGCTGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919501       <-- TGGGAGGAAACCAAGTAAGGCCAAGTACTTTTTGGACGATGTAGCTGATG  Raphanus raphanistrum subsp. landra
FY445968       <-- TGGGAGAAAACCAAGTAAGGCTAAGTACTTTTTGGATGATGTAGCTGATG  Raphanus sativus cv GSK3-1
FY442914       <-- TGGGAGAAAACCAAGTAAGGCTAAGTACTTTTTGGATGATGTAGCTGATG  Raphanus sativus cv GSK3-1
EV531182       <-- TGGGAGGAAACCAAGTAAGGCCAAGTACTTTTTGGACGATGTAGCTGATG  Raphanus raphanistrum subsp. maritimus
EY945307       <-- TGGGAGGAAACCAAGTAAGGCCAAGTACTTTTTGGACGATGTAGCTGATG  Raphanus sativus cv Rat-Tail Radish #3870
EY928934       <-- TGGGAGAAAACCAAGTAAGGCTAAGTACTTCTTGGATGATGTAGCTGATG  Raphanus sativus var. oleiformis
EW720280       <-- TGGGAGGAAACCAAGTAAGGCCAAGTACTTTTTGGACGATGTGGCTGATG  Raphanus sativus var. oleiformis
FD566262       <-- TGGGAGAAAACCAAGTAAGGCTAAGTACTTCTTGGATGATGTAGCTGATG  Raphanus sativus var. oleiformis
EX758669       <-- TGGGAGAAAACCAAGTAAGGCTAAGTACTTTTTGGATGATGTAGCTGATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY911916       <-- TGGGAGAAAACCAAGTAAGGCTAAGTACTTTTTGGATGATGTAGCTGATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901754       <-- TGGGAGAAAACCAAGTAAGGCTAAGTACTTTTTGGATGATGTAGCTGATG  Raphanus sativus cv Early Scarlet Globe
EY949870       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY923746       --> TGGGAGGAAACCAAGTAAG-CCAAGTACTTTTTGGACGATGTAGCTGATG  Raphanus raphanistrum subsp. landra
EY916194       --> TGGGAGAAAACCAAGTAAG-CTAAGTACTTTTTGGATGATGTAGCTGATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD578941       --> TGGGAGGAAACCAAGTAAGGCCAAGTACTTTTTGGACGATGTAGCTGATG  Raphanus sativus cv Rat-Tail Radish #3870
EV536568       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV526787       --> TGGGAGGAAACCAAGTAAGGCCAAGTACTTTTTGGACGATGTAGCTGATG  Raphanus raphanistrum subsp. maritimus
FD986449       --> TGGGAGGAAACCAAGTAAGGCCAAGTACTTTTTGGACGATGTAGCTGATG  Raphanus raphanistrum subsp. landra
EX754315       --> TGGGAGAAAACCAAGTAAGGCTAAGTACTTTTTGGATGATGTAGCTGATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX898128       --> TGGGAGAAAACCAAGTAAGGCTAAGTACTTTTTGGATGATGTAGCTGATG  Raphanus sativus cv Early Scarlet Globe

               1001   -   1051
UN16289        --> TGCTTAAGCTACTAAAAGGTTTGGGGGATTCATCGTTGAGCTTGAAGACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919501       <-- TGCTTAAGCTACTAAAAGGTTTGGGGGATTCATCGTTGAGCTTGAAGACT  Raphanus raphanistrum subsp. landra
FY445968       <-- TGCTTAAGCTACTAAAAGGTTTGGGGGATTCATCGTTGAGCTTGAAGACC  Raphanus sativus cv GSK3-1
FY442914       <-- TGCTTAAGCTACTAAAAGGTTTGGGGGATTCATCGTTGAGCTTGAAGACC  Raphanus sativus cv GSK3-1
EV531182       <-- TGCTTAAGCTACTAAAAGGTTTGGGGGATTCATCGTTGAGCTTGAAGACT  Raphanus raphanistrum subsp. maritimus
EY945307       <-- TGCTTAAGCTACTAAAAGGTTTGGGGGATTCATCGTTGAGCTTGAAGACT  Raphanus sativus cv Rat-Tail Radish #3870
EY928934       <-- TGCTTAAGCTACTAAAAGGTTTGGGGGATTCATCGTTGAGCTTGAAGACC  Raphanus sativus var. oleiformis
EW720280       <-- TGCTTAAGCTACTAAAAGGTTTGGGGGATTCATCGTTGAGCTTGAAGACT  Raphanus sativus var. oleiformis
FD566262       <-- TGCTTAAGCTACTAAAAGGTTTGGGGGATTCATCGTTGAGCTTGAAGACC  Raphanus sativus var. oleiformis
EX758669       <-- TGCTTAAGCTACTAAAAGGTTTGGGGGATTCATCGTTGAGCTTGAAGACC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY911916       <-- TGCTTAAGCTACTAAAAGGTTTGGGGGATTCATCGTTGAGCTTGAAGACC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901754       <-- TGCTTAAGCTACTAAAAGGTTTGGGGGATTCATCGTTGAGCTTGAAGACC  Raphanus sativus cv Early Scarlet Globe
EY949870       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY923746       --> TGCTTA-GCTACTAAAAGGTTTGGGGGAT-CATCGTTGAGCTTGA-GACT  Raphanus raphanistrum subsp. landra
EY916194       --> TGCTTAAGCTACTAAAAG-TTTGGGGGATTCATCGTTGAGCT........  Raphanus raphanistrum subsp. raphanistrum (NY)
FD578941       --> TGCTTAAGCTACTAAAAGGTTTGGGGGATTCATCGTTGAGCTTGAAGACT  Raphanus sativus cv Rat-Tail Radish #3870
EV536568       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV526787       --> TGCTTAAGCTACTAAAAGGTTTGGGGGATTCATCGTTGAGCTTGAAGACT  Raphanus raphanistrum subsp. maritimus
FD986449       --> TGCTTAAGCTACTAAAAGGTTTGGGGGATTCATCGTTGAGCTTGAAGACT  Raphanus raphanistrum subsp. landra
EX754315       --> TGCTTAAGCTACTAAAAGGTTTGGGGGATTCATCGTTGAGCTTGAAGACC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX898128       --> TGCTTAAGCTACTAAAAGGTTTGGGGGATTCATCGTTGAGCTTGAAGACC  Raphanus sativus cv Early Scarlet Globe

               1051   -   1101
UN16289        --> ACTTCTCACACAGAAGTTGCATTTGAAAGCATCTTTTAAAAGTGG-AAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919501       <-- ACTTCTCACACAGAAGTTGCATTTGAAAGCATCTTTTAAAAGTGG-AAGT  Raphanus raphanistrum subsp. landra
FY445968       <-- ACTTCTCACACAGAAGTTGCATTTGAAAGCATCTTTTAAAAGTGG-AAGT  Raphanus sativus cv GSK3-1
FY442914       <-- ACTTCTCACACAGAAGTTGCATTTGAAAGCATCTTTTAAAAGTGG-AAGT  Raphanus sativus cv GSK3-1
EV531182       <-- ACTTCTCACACAGAAGTTGCATTTGAAAGCATCTTTTAAAAGTGG-AAGT  Raphanus raphanistrum subsp. maritimus
EY945307       <-- ACTTCTCACACAGAACTTGCATTTGAAAGCATCTTTTAAAAGTGG-AAGT  Raphanus sativus cv Rat-Tail Radish #3870
EY928934       <-- ACATCTCACACAGAAGTTGCATTTGAAAGCATCTTTTAAAAGTGGGAAGT  Raphanus sativus var. oleiformis
EW720280       <-- ACTTCTCACACAGAAGTTGCATTTGAAAGCATCTTTTAAAAGTGG-AAGT  Raphanus sativus var. oleiformis
FD566262       <-- ACATCTCACACAGAAGTTGCATTTGAAAGCATCTTTTAAAAGTGGGAAGT  Raphanus sativus var. oleiformis
EX758669       <-- ACTTCTCACACAGAAGTTGCATTTGAAAGCATCTTTTAAAAGTGGGAAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY911916       <-- ACTTCTCACACAGAAGTTGCATTTGAAAGCATCTTTTAAAAGTGG-AAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901754       <-- ACTTCTCACACAGAAGTTGCATTTGAAAGCATCTTTTAAAAGTGG-AAGT  Raphanus sativus cv Early Scarlet Globe
EY949870       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY923746       --> AC-TCTCACACAG.....................................  Raphanus raphanistrum subsp. landra
EY916194       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD578941       --> ACTTCTCACACAGAACTTGCATTTGAAAGCATCTTT-AAAAGTGG-AAGT  Raphanus sativus cv Rat-Tail Radish #3870
EV536568       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV526787       --> ACTTCTCACAC.......................................  Raphanus raphanistrum subsp. maritimus
FD986449       --> ACTTCTCACACAGAAGTTGCATTTGAAAGCATCTTTTAAAAGTGG-AAGT  Raphanus raphanistrum subsp. landra
EX754315       --> ACTTCTCACACAGAAGTTGCATTTGAAAGCATCTTTTAAAAGTGGGAAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX898128       --> ACTTCTCACACAGAAGTTGCATTTGAAAGCATCTTTTAAAAGTGG-AAGT  Raphanus sativus cv Early Scarlet Globe

               1101   -   1151
UN16289        --> GTCAAAAAATAACCAGAGTTAAATTTACTTAACATCAAAATGTAAAAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919501       <-- GTCAAAAAATAACCGGAGTTAAATTTACTTAACATCAAAATGTAAAAAGA  Raphanus raphanistrum subsp. landra
FY445968       <-- GTCAAAAAATAACCAGAGTTAAATTTACTTAACATCAAAATGTAAAAAAA  Raphanus sativus cv GSK3-1
FY442914       <-- GTCAAAAAATAACCAGAGTTAAATTTACTTAACATCAAAATGTAAAAAAA  Raphanus sativus cv GSK3-1
EV531182       <-- GTCAAAAAATAACCGGAGTTAAATTTACTTAACATCAAAATGTAAAAAAA  Raphanus raphanistrum subsp. maritimus
EY945307       <-- GTCAAAAATTAACCGGAGTTAAATTTACTTAACATCAAAATGTAAAAAAA  Raphanus sativus cv Rat-Tail Radish #3870
EY928934       <-- GTCAAAAAATAACCAGAGTTAAATTTACTTAACATCAAAATGT.......  Raphanus sativus var. oleiformis
EW720280       <-- GTCAAAAAATAACCGGAGTTAATTTTACTTAACATCAAAATGTAAAAAAA  Raphanus sativus var. oleiformis
FD566262       <-- GTCAAAAAATAACCAGAGTTAAATTTACTTAACATCAAAATGT.......  Raphanus sativus var. oleiformis
EX758669       <-- GTCAAAAAATAACCAGAGTTAAATTTACTTAACATCAAAATGTAAAAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY911916       <-- GTCAAAAAATAACCAGAGTTAAATTTACTTAACATCAAAATGTAAAAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901754       <-- GTCAAAAAATAACCAGAGTTAAATTTACTTAACATCAAAATGTAAAAAAA  Raphanus sativus cv Early Scarlet Globe
EY949870       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY923746       --> ..................................................  Raphanus raphanistrum subsp. landra
EY916194       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD578941       --> GTCAAAA-TTAACCGGAGTTAAAT..........................  Raphanus sativus cv Rat-Tail Radish #3870
EV536568       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV526787       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD986449       --> GTCAAAAAATAACCGGAGTTAAATTTACTTAACATCAAAATGTAAAAAA-  Raphanus raphanistrum subsp. landra
EX754315       --> GTCAAAAAATAACCAGAGTTAAATTTACTTAACATCAAAATGTAAAAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX898128       --> GTCAAAAAATAACCAGAGTTAAATTTACTTAACATCAAAATGTAAAAAAA  Raphanus sativus cv Early Scarlet Globe

               1151   -   1201
UN16289        --> GAAAATGAGAAATGGTATTTAATCTGCTTTTGAAGGATTTATTGTTTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919501       <-- GAAAATGAGAAATGGTATTTAATCTGCTTTTGAAGGATTTATTGTTT...
FY445968       <-- GAAAATGAGAAATGGTATTTAATCTGCTTT-GAAGGATT...........
FY442914       <-- GAAAATGAGAAATGGTATTTA-TCTGCTTT-GAAGGATT...........
EV531182       <-- GAAAATGAGAAATGGTATTTAATCTGCc......................
EY945307       <-- GAAAATGAGAAATGG...................................
EY928934       <-- ..................................................
EW720280       <-- GAAAATGAGAAATGGTATTTAATCTGCTTTTGAAGGATTTATTGTTTCTT
FD566262       <-- ..................................................
EX758669       <-- GAAAATGAGAAATGG...................................
EY911916       <-- GAAAATGAGAAATGGTATTTAATCTGCTTTTGAAGGATTTATTGTTTCTT
EX901754       <-- GAAAATGAGAAGTGG...................................
EY949870       --> ..................................................
EY923746       --> ..................................................
EY916194       --> ..................................................
FD578941       --> ..................................................
EV536568       --> ..................................................
EV526787       --> ..................................................
FD986449       --> GAAAATGAGAAATGG...................................
EX754315       --> GAAAATGAGAAATGG...................................
EX898128       --> GAAAATGAGAAGTGG...................................

               1201   -   1251
UN16289        --> GGTTTTAACTATTGTTTTGGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~
EY919501       <-- .......................
FY445968       <-- .......................
FY442914       <-- .......................
EV531182       <-- .......................
EY945307       <-- .......................
EY928934       <-- .......................
EW720280       <-- GGTTTTAACTATTGTTTTGGGTT
FD566262       <-- .......................
EX758669       <-- .......................
EY911916       <-- GGTTTTAACTATTGTTTTGGGg.
EX901754       <-- .......................
EY949870       --> .......................
EY923746       --> .......................
EY916194       --> .......................
FD578941       --> .......................
EV536568       --> .......................
EV526787       --> .......................
FD986449       --> .......................
EX754315       --> .......................
EX898128       --> .......................