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Alignment for radish unigene UN16295

               1      -     51
UN16295        --> CTGGTTGCTAAATTTGTACATTCAAAGAAGATTATGTTTCAGATAAACGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW734026       <-- ..................................................
FD559813       <-- ..................................................
FD565225       --> CTGGTTGCTAAATTTGTACATTCAAAGAAGACTATGTTTCAAATAAACGC
EV544292       --> ..GGTTGCTAAATTTGTACATTCAAAGAAGATTATGCTTCAGATAAACGC
FD574829       --> ..GGTTGCTAAATTTGTACATTCAAAGAAGATTATGTTTCAGATAAACGC
FD952488       --> ......................gcAAGAAGATTATGTTTCAGATAAACGC
FD545431       --> ...............................TTATGTTTCAGATAAACGC
EY934726       --> .......................................cgGATAAACGC
FD573244       --> ...............................................CGC
FD555455       --> ..................................................
EW739227       --> ..................................................

               51     -    101
UN16295        --> TTTAGATACCAAACTGTGGTTTCTTGCATGGAAAAGTGATATACTCTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW734026       <-- ..................................................
FD559813       <-- ..................................................
FD565225       --> TTTAGATACCAAACTGTGGTTTCTTGCATGGAAAAGTGATATACTCTACA
EV544292       --> TTTAGATACCAAACTGTGGTTTCTTGCATGGAAAAGTGATATACTCTACA
FD574829       --> TTTAGATACCAAACTGTGGTTTCTTGCATGGAAAAGTGATATACTCTACA
FD952488       --> TTTAGATACCAAACTGTGGTTTCTTGCATGGAAAAGTGATATACTCTACA
FD545431       --> TTTAGATACCAAACTGTGGTTTCTTGCATGGAAAAGTGATATACTCTACA
EY934726       --> TTTAGATACCAAACTGTGGTTTCTTGCATGGAAAAGTGATATACTCTACA
FD573244       --> TTTAAATACCAAACTGTGGTTTCTTGCATGGAAAAGTGATATACTCTACA
FD555455       --> .......ACCAAACTGTGGTTTCTTGCATGGAAAAGTGATATACTATACA
EW739227       --> ..................................................

               101    -    151
UN16295        --> AGATACACATGATTTTTTTT-GTCTTTCTTTGAACAGCCAAGTTCTTCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW734026       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD559813       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD565225       --> AGATACACATGATTTTTTTTTGTCTTTCTTTGAACAGCCAAGTTCTTCAC  Raphanus sativus var. oleiformis
EV544292       --> AGATACACATGATTTTTT---GTCTTTCTTTGAACAGCCAAGTTCTTCAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD574829       --> AGATACACATGATTTTTTTTTGTCTTTCTTTGAACAGCCAAGTTCTTCAC  Raphanus sativus cv Early Scarlet Globe
FD952488       --> AGATACACATGATTTTGTTT-GTCTTT----GAACAACCAAGTTCTTCAT  Raphanus sativus cv Rat-Tail Radish #3870
FD545431       --> AGATACACATGATTTTTT---GTCTTTCTTTGAACAGCCAAGTTCTTCAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY934726       --> AGATACACATGATTTTTTTTTGTCTTTCTTTGAACAGCCAAGTTCTTCAC  Raphanus sativus cv Early Scarlet Globe
FD573244       --> AGATACACATGATTTTTTTTTGTCTTTCTTTGAACAGCCAAGTTCTTCAC  Raphanus sativus cv Early Scarlet Globe
FD555455       --> AGATACACATGATTTTTTTT-GTCTTTCTTTGAACAGCCAAGTTCTTCAC  Raphanus raphanistrum subsp. landra
EW739227       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               151    -    201
UN16295        --> CGACCTGTGAGCTTGACCATCCAAGCACCACCTAAGTAGAGGCCCAGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW734026       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD559813       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD565225       --> CGACCTGTGAGCTTGACCATCCAAGCACCACCTAAGTAGAGGCCCAGAAG  Raphanus sativus var. oleiformis
EV544292       --> CGACCTGTGAGCTTGACCATCCAAGCACCACCTAAGTAGAGCCCCAGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD574829       --> CGACCTGTGAGCTTGACCATCCAAGCACCACCCAAGTAGAGGCCCAGAAG  Raphanus sativus cv Early Scarlet Globe
FD952488       --> CGACCTGTGAGCTTGACCATCCAAGCACCACCCAAGTAGAGGCCCAGAAG  Raphanus sativus cv Rat-Tail Radish #3870
FD545431       --> CGACCTGTGAGCTTGACCATCCAAGCACCACCTAAGTAGAGCCCCAGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY934726       --> CGACCTGTGAGCTTGACCATCCAAGCACCACCCAAGTAGAGGCCCAGAAG  Raphanus sativus cv Early Scarlet Globe
FD573244       --> CGACCTGTGAGCTTGACCATCCAAGCACCACCCAAGTAGAGGCCCAGAAG  Raphanus sativus cv Early Scarlet Globe
FD555455       --> CGACCTGTGAGCTTGACCATCCAAGCACCACCTAAGTAGAGGCCCAGAAG  Raphanus raphanistrum subsp. landra
EW739227       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               201    -    251
UN16295        --> CGGTGTTGCTAGGAGCATCTGAGTGACAGGGTCTGTCGAGGGCGTGACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW734026       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD559813       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD565225       --> CGGTGTTGCTAGGAGCATCTGAGTGACAGGGTCTGTCGAGGGCGTGACCA  Raphanus sativus var. oleiformis
EV544292       --> CGGTGTCGCTAGGAGCATCTGAGTGACAGGGTCTGTCGAAGGCGTGACCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD574829       --> CGGTGTTGCTAGGAGCATCTGAGTGACAGGGTCTGTCGAGGGCGTGACCA  Raphanus sativus cv Early Scarlet Globe
FD952488       --> CGGTGTTGCTAGGAGCATCTGAGTGACAGGGTCTGTCGAAGGCGTGACCA  Raphanus sativus cv Rat-Tail Radish #3870
FD545431       --> CGGTGTCGCTAGGAGCATCTGAGTGACAGGGTCTGTCGAAGGCGTGACCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY934726       --> CGGTGTTGCTAGGAGCATCTGAGTGACAGGGTCTGTCGAGGGCGTGACCA  Raphanus sativus cv Early Scarlet Globe
FD573244       --> CGGTGTTGCTAGGAGCATCTGAGTGACAGGGTCTGTCGAGGGCGTGACCA  Raphanus sativus cv Early Scarlet Globe
FD555455       --> CGGTGTTGCTAGGAGCATCTGAGTGACAGGGTCTGTCGAAGGCGTGACCA  Raphanus raphanistrum subsp. landra
EW739227       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               251    -    301
UN16295        --> CAGCTGCTACAACCACCGCACCCACAACTACATATCTCCATATTGAAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW734026       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD559813       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD565225       --> CAGCTGCTACAACCACCGCACCCACAACTACATATCTCCATATTGAAAGC  Raphanus sativus var. oleiformis
EV544292       --> CAGCTGCTACAACCACCGCACCCACAACTACATATCTCCATATTGAAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD574829       --> CAGCTGCTACAACCACCGCACCCACCACTACATATCTCCATATTGAAAGC  Raphanus sativus cv Early Scarlet Globe
FD952488       --> CAGCTGCTACAACCACCGCACCCACAACTACATATCTCCATATTGAAAGC  Raphanus sativus cv Rat-Tail Radish #3870
FD545431       --> CAGCTGCTACAACCACCGCACCCACAACTACATATCTCCATATTGAAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY934726       --> CAGCTGCTACAACCACCGCACCCACCACTACATATCTCCATATTGAAAGC  Raphanus sativus cv Early Scarlet Globe
FD573244       --> CAGCTGCTACAACCACCGCACCCACCACTACATATCTCCATATTGAAAGC  Raphanus sativus cv Early Scarlet Globe
FD555455       --> CAGCTGCTACAACCACCGCACCCACAACTACATATCTCCATATTGAAAGC  Raphanus raphanistrum subsp. landra
EW739227       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               301    -    351
UN16295        --> ATTTGATCTCCCGACACCACCCCTACTTGTCCCAGGAGTAACTGAATTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW734026       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD559813       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD565225       --> ATTTGATCTCCCGACACCACCCCTACTTGTCCCAAGAGTAACTGAATTAC  Raphanus sativus var. oleiformis
EV544292       --> ATTTGATCTCCTGACACCACCCCTACTTGTCCCAGGAGTAACTGAATTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD574829       --> ATTTGATCTCCCGACACCACCCCTACTTGTCCCAGGAGTAACTGAATTAC  Raphanus sativus cv Early Scarlet Globe
FD952488       --> ATTTGATCTCCCGACACCACCCCTACTTGTCCCAAGAGTAACTGAATTAC  Raphanus sativus cv Rat-Tail Radish #3870
FD545431       --> ATTTGATCTCCTGACACCACCCCTACTTGTCCCAGGAGTAACTGAATTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY934726       --> ATTTGATCTCCCGACACCACCCCTACTTGTCCCAGGAGTAACTGAATTAC  Raphanus sativus cv Early Scarlet Globe
FD573244       --> ATTTGATCTCCCGACACCACCCCTACTTGTCCCAGGAGTAACTGAATTAC  Raphanus sativus cv Early Scarlet Globe
FD555455       --> ATTTGATCTCCTGACACCACCCCTACTTGTCCCAGGAGTAACTGAATTAC  Raphanus raphanistrum subsp. landra
EW739227       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               351    -    401
UN16295        --> TGGAACCTGGAAAGACAGGCCGGTGCTGAACATAAGCACAAGTACAAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW734026       <-- ..................................................
FD559813       <-- ..................................................
FD565225       --> AGGAACCTGGAAAGACAGGCCGGTGCTGAACATAAGCACAAGTACAAACT
EV544292       --> TGGAACCTGGAAAGACAGGCCGGTGCTGAACATAAGCACAAGTACAGACT
FD574829       --> TGGAACCTGGAAAGACAGGCCGGTGCTGAACATAAGCACAAGTACAAACT
FD952488       --> TGGAACCTGGAAAGACAGGCCGGTGCTGAACATAAGCACAAGTACAAACT
FD545431       --> TGGAACCTGGAAAGACAGGCCGGTGCTGAACATAAGCACAAGTACAAACT
EY934726       --> TGGAACCTGGAAAGACAGGCCGGTGCTGAACATAAGCACAAGTACAAACT
FD573244       --> TGGAACCTGGAAAGACAGGCCGGTGCTGAACATAAGCACAAGTACAAACT
FD555455       --> TGGAACCTGGAAAGACAGGCCGGTGCTGAACATAAGCACAAGTACAAACT
EW739227       --> ..................................................

               401    -    451
UN16295        --> CAAAGTACTGGTCGATAGACCAGAGAGATTCAACCACCCCTTCAGCGTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW734026       <-- ................AGACCAGAGAGATTCAACCACCCATTCAGCGTAG
FD559813       <-- ..................................................
FD565225       --> CAAAGTACTGGTCGATAGACCAGAGAGATTCAACCACCCCTTCAGCGTAG
EV544292       --> CAAAGTACTGGTCGATAGACCAGAGAGATTCAACCACCCCTTCAGCGTAG
FD574829       --> CAAAGTACTGGTCGATAGACCAGAAAGATTCAAGCACCCCTTCAGCGTAG
FD952488       --> CAAAGTACTGGTCGATAGACCAGAGAGATTCAACCACACCTTCAGCGTAG
FD545431       --> CAAAGTACTGGTCGATAGACCAGAGAGATTCAACCACCCCTTCAGCGTAG
EY934726       --> CAAAGTACTGGTCGATAGACCAGAGAGATTCAACCACCCCTTCAGCGTAG
FD573244       --> CAAAGTACTGGTCGATAGACCAAAAAGATTCAACCACCCCTTCAGCGTAG
FD555455       --> CAAAGTACTGGTCGATAGACCAGAGAGATTCAACCACCCCTTCAGCGTAG
EW739227       --> ..................................................

               451    -    501
UN16295        --> TTGACAAAGAAATTCAAGGCAGCAGGGGTTAAAACCCAGTAGGAGAAGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW734026       <-- TTGACAAAGAAATTCAAGGCAGCAGGGGTTAAAACCCAGTAGGAGAAGGC
FD559813       <-- ..................................................
FD565225       --> TTGACAAAGAAATTCAAGGCAGCAGGGGTTAAAACCCAGTAGGAGAAGGC
EV544292       --> TTGACAAAGAAATTCATGGCAGCAGGGGTTAAAACCCAGTAGGAGAAGGC
FD574829       --> TTGACAAAGAAATTCAAGGGAGCAGGGGTTAAAACCCAGTAGGAGAAGGC
FD952488       --> TTGACAAAGAAATTCAAGGCAGCAGGGGTTAAAACCCAGTAGGAGAAGGC
FD545431       --> TTGACAAAGAAATTCAAGGCAGCAGGGGTTAAAACCCAGTAGGAGAAGGC
EY934726       --> TTGACAAAGAAATTCAAGGCAGCAGGGGTTAAAACCCAGTAGGAGAAGGC
FD573244       --> TTGACAAAAAAATTCAAGGAAGCAGGGGTTAAAACCCAGTAGGAAAAGGC
FD555455       --> TTGACAAAGAAATTCAAGGCAGCAGGGGCTAAAACCCAGTAGGAGAAGGC
EW739227       --> ..........AATTCAAGGCAGCAGGGGTTAAAACCCAGTAGGAAAAGGC

               501    -    551
UN16295        --> AAGTCCAGCATAGAACAACAAGGAGGAACCAAACACAATTGGCCCCAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW734026       <-- AAGTCCAGCATAGAACAACAAGGAGGAACCAAACACAATTGGCCCCAGAA
FD559813       <-- ..................................................
FD565225       --> AAGTCCAGCATAGAACAACAAGGAGGAACCAAACACAATTGGCCCCAGAA
EV544292       --> AAGTCCAGCATAGAACAACAAGGAGGAACCAAACACAATTGGCCCCAGAA
FD574829       --> AAGTCCAGCATAAAACAACAAGGAGGAACCAAACACAATTGGCCCCAGAA
FD952488       --> AAGTCCAGCATAGAATAACAAGGAGGAACCAAACACAATTGGCCCCAGAA
FD545431       --> AAGTCCAGCATAGAACAACAAGGAGGAACCAAACACAATTGGCCCCAGAA
EY934726       --> AAGTCCAGCATAGAACAACAAGGAGGAACCAAACACAATTGGCCCCAGAA
FD573244       --> AAGTCCAGCATAAAACAACAAGGAGGAACCAAACACAATTGGCCCCAGAA
FD555455       --> AAGTCCAGCATAGAACAACAAGGAGGAACCAAACACAATTGGCCCCAGAA
EW739227       --> AAGTCCAGCATAGAACAACAAGGAGGAACCAAACACAATTGGCCCCAGAA

               551    -    601
UN16295        --> ACCTTCTCTCAGCTCGTGTCAAACCAGGAAGTACAAAA-GCTATAATCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW734026       <-- ACCTTCTCTCAG......................................
FD559813       <-- ......TCTCAGCTCGTGTCAAACCAGGAAGTACAAAAAGCTATA-TCTC
FD565225       --> ACCTTCTCTCAGCTCGTATCAAACCAGGAAGTACAAAA-GCTATAATCTC
EV544292       --> ACCTTCTCTCAGCTCGTGTCAAACCAGGAAGTACAAAA-GCTATAATCTC
FD574829       --> ACCTTCTCTCAGCTCGTGTCAAACCAGGAAGTACAAAA-GCTATAATCTC
FD952488       --> ACCTTCTCTCAGCTCGTGTCAAACCAGGAAGTACAAAA-GCTATGATCTC
FD545431       --> ACCTTCTCTCAGCTCGTGTCAAACCAGGAAGTACAAAA-GCTATAATCTC
EY934726       --> ACCTTCTCTCAGCTCGTGTCAAACCAGGAAGTACAAAA-GCTATAATCTC
FD573244       --> ACCTTCTCTCAGCTCGTGTCAAACCAGGAAGTACAAAA-GCTATAATCTC
FD555455       --> ACCTTCTCTCAGCTCGTGTCAAACCAGGAAGTACAAAA-GCTATAATCTC
EW739227       --> ACCTTCTCTCAGCTCGTGTCAAACCAGGAAGTACAAAA-GCTATAATCTC

               601    -    651
UN16295        --> ATACAGTATCACTGGACTCCCTAGTAGAAGCCCACAATAACCCGAGACCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW734026       <-- ..................................................
FD559813       <-- ATACAGTATCACTGGACTCCCTAGTAGAAGCCCACAATAACCCGAGACCT
FD565225       --> ATACAGTATCACTGGACTCCCTAGTAGAAGCCCACAATAACCCGAGACCT
EV544292       --> ATACAGTATCACTGGACTCCCTAGTAGAAGCCCACAATAACCCGAGACCT
FD574829       --> ATATAGTATCACTGGACTCCCTAGTAGAAGCCCACAATAACCCGAGACCT
FD952488       --> ATACAGTATCACTGGAC.................................
FD545431       --> ATACAGTATCACTGGACTCCCTAGTAGAAGCCCACAATAACCCGAGACCT
EY934726       --> ATACAGTATCACTGGACTCCCTAGTAGAAGCCCACAATAACCCGAGACCT
FD573244       --> ATACAGTATCACTGGACTCCCTAGTAGAAGCCCACAATAACCCGAGACCT
FD555455       --> ATACAGTATCACTGGACTCCCTAGTAGAAGCCCACAATAACCCGAGACCT
EW739227       --> ATACAGTATCACTGGACTCCCTAGTAGAAGCCCACAATAACCCGAGACCT

               651    -    701
UN16295        --> TTAAAGTTGTGAAGAAAAACTCGCCTGGAGCTAGCTGCAGAAACCGTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW734026       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD559813       <-- TTAAAGTTGTGAAGAAAA-CTCGCCTGGAGCTAGCTGCAGAAACCGTACG  Raphanus raphanistrum subsp. landra
FD565225       --> TTAAAGTTGTGAAGAAAAACTCGCCCGGAGCTAGCTGCAGAAACCGTACG  Raphanus sativus var. oleiformis
EV544292       --> TTAAAGTTGTGAAGAAAAACTCGCCTGGAGCTAGCTGCAGAAACCGTACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD574829       --> TTAAA.............................................  Raphanus sativus cv Early Scarlet Globe
FD952488       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD545431       --> TTAAAGTTGTGAAGAAAAACTCGCCTGGAGCTAGCTGCAGAAACCGTACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY934726       --> TTAAAGTTGTGAAGAAAAACTCGCCTGGAGCTAGCTGCAGAAACCGTACA  Raphanus sativus cv Early Scarlet Globe
FD573244       --> TTAAAGTTGTGAAGAAAAACTCGCCTGGAGCTAGCTGCAGAAACCGTACA  Raphanus sativus cv Early Scarlet Globe
FD555455       --> TTAAAGTTGTGAAGAAAAACTCGCCTGGAGCTAGCTGCAGAAACCGTACG  Raphanus raphanistrum subsp. landra
EW739227       --> TTAAAGTTcc........................................  Raphanus sativus cv Rat-Tail Radish #3870

               701    -    751
UN16295        --> CCTTGTGTTTTGACGGGAGCTTCGAGAAACACGATTAGATCTTTGGAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW734026       <-- ..................................................
FD559813       <-- CCTTGTGTTTTGACGGGAGCTTCGAGAAACACGATTAGATCTTTGGAGTA
FD565225       --> CCCTGTGTTTTGACGGGAGCTTCGAGAAACACGATTAGATCTTTGGAGTA
EV544292       --> CCTTGTGTTTTGACGGGAGCTTCGAGAAACACGATTAGATCTTTGGAGTA
FD574829       --> ..................................................
FD952488       --> ..................................................
FD545431       --> CCTTGTGT..........................................
EY934726       --> CCTTGTGTTTTGACGGGAGCTTCGAGAAACACGATTAGATCTTTGGA...
FD573244       --> CCTTGTGTTTTGACGGGAGCTT............................
FD555455       --> CCTTGTGTTTTGACGGGAGCTTCGAGAAACACGATTAGATCTTTGGAGTA
EW739227       --> ..................................................

               751    -    801
UN16295        --> GGCGAAGCATCCCAAGATTGCAGCTCCCACAGCTAAAACGGAGACGAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW734026       <-- ..................................................
FD559813       <-- GGCGAAGCATCCCAAGATTGCAGCTCCAACAGCTAAAACGGAGACGAATA
FD565225       --> GGCGAAGCATCCCAAGATTGCAGCTCCCACAGCTAAA-CCGAGACGAATA
EV544292       --> GGCGAAGCATCCCAAGATTGCAGCTCCCACAGCTAAAACCGAGACGAATA
FD574829       --> ..................................................
FD952488       --> ..................................................
FD545431       --> ..................................................
EY934726       --> ..................................................
FD573244       --> ..................................................
FD555455       --> GGCGAAGCATCCCAAGATTGCAGCTCCAACAGCTAAAACGGAGACGAATA
EW739227       --> ..................................................

               801    -    851
UN16295        --> TTCTCTCACGGAGCTCCTCAAGATGATCGAATATAGTCATCTCTTTGTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW734026       <-- ..................................................
FD559813       <-- TTCTCTCACGGAGCTCCTCAAGATGATCGAATATAGTCATCTCTTTGTCA
FD565225       --> T-CTCTCACGGAGCT...................................
EV544292       --> TTCTCTCACGGAGCTCCTCAAGATGATCGAATATAGTCATCTCTTTATCA
FD574829       --> ..................................................
FD952488       --> ..................................................
FD545431       --> ..................................................
EY934726       --> ..................................................
FD573244       --> ..................................................
FD555455       --> TTCTCTCACGGAGCTCCTCAAGATGATCGAATATAGTCATCTCTTT....
EW739227       --> ..................................................

               851    -    901
UN16295        --> TCAGGGAGCTCCTCTTTATCTGGATAAAGAAATCCATAGATGGAACTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW734026       <-- ..................................................
FD559813       <-- TCAGGGAGCTCCTCTTTATCTGGATAAAGAAATCCATAGATGGAACTTGT
FD565225       --> ..................................................
EV544292       --> TCAGG-AGCTCCTCTTTATCTGGATAAAGAAATCCATAGATGGAACTT..
FD574829       --> ..................................................
FD952488       --> ..................................................
FD545431       --> ..................................................
EY934726       --> ..................................................
FD573244       --> ..................................................
FD555455       --> ..................................................
EW739227       --> ..................................................

               901    -    951
UN16295        --> TTTGTCTTCTTGCTCAAAGGACGCATCTTCCACAGCTGGTCTATCTTCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW734026       <-- ..................................................
FD559813       <-- TTTGTCTTCTTGCTCAAAGGACGCATCTTCCACAGCTGGTCTATCTTCTA
FD565225       --> ..................................................
EV544292       --> ..................................................
FD574829       --> ..................................................
FD952488       --> ..................................................
FD545431       --> ..................................................
EY934726       --> ..................................................
FD573244       --> ..................................................
FD555455       --> ..................................................
EW739227       --> ..................................................

               951    -   1001
UN16295        --> CAGCAGAGCCAACGCCTGGAGTGGTTTCCGTTGGTGAGTCTCCGGAATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW734026       <-- ..................................................
FD559813       <-- CAGCAGAGCCAACGCCTGGAGTGGTTTCCGTTGGTGAGTCTCCGGAATTT
FD565225       --> ..................................................
EV544292       --> ..................................................
FD574829       --> ..................................................
FD952488       --> ..................................................
FD545431       --> ..................................................
EY934726       --> ..................................................
FD573244       --> ..................................................
FD555455       --> ..................................................
EW739227       --> ..................................................

               1001   -   1051
UN16295        --> TCACCGAGCTGAAAAGCGGCCCACCGGGTCTAACCTTTGGCTACGGCGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW734026       <-- ..................................................
FD559813       <-- TCACCGAGCTGAAAAGCGGCCCACCGGGTCTAACCTTTGGCTACGGCGTC
FD565225       --> ..................................................
EV544292       --> ..................................................
FD574829       --> ..................................................
FD952488       --> ..................................................
FD545431       --> ..................................................
EY934726       --> ..................................................
FD573244       --> ..................................................
FD555455       --> ..................................................
EW739227       --> ..................................................

               1051   -   1101
UN16295        --> GCGTCACACCGTGTCGGAGGAGTCCACTTTCCTTCCACGAATTGCTGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW734026       <-- ..................................................
FD559813       <-- GCGTCACACCGTGTCGGAGGAGTCCACTTTCCTTCCACGAATTGCTGAAA
FD565225       --> ..................................................
EV544292       --> ..................................................
FD574829       --> ..................................................
FD952488       --> ..................................................
FD545431       --> ..................................................
EY934726       --> ..................................................
FD573244       --> ..................................................
FD555455       --> ..................................................
EW739227       --> ..................................................

               1101   -   1151
UN16295        --> CTCACGGTGTTGTACGGAGGCTTTCTAGGGGAATCAAGGTTGATACTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW734026       <-- ..................................................
FD559813       <-- CTCACGGTGTTGTACGGAGGCTTTCTAGGGGAATCAAGGTTGATACTGGT
FD565225       --> ..................................................
EV544292       --> ..................................................
FD574829       --> ..................................................
FD952488       --> ..................................................
FD545431       --> ..................................................
EY934726       --> ..................................................
FD573244       --> ..................................................
FD555455       --> ..................................................
EW739227       --> ..................................................

               1151   -   1201
UN16295        --> GAGCTGGAAATGGTGAAATAGAGCAGCAGAAGCCGTGCTTGTGCTGCCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW734026       <-- ..................................................
FD559813       <-- GAGCTGGAAATGGTGAAATAGAGCAGCAGAAGCCGTGCTTGTGCTGCCCA
FD565225       --> ..................................................
EV544292       --> ..................................................
FD574829       --> ..................................................
FD952488       --> ..................................................
FD545431       --> ..................................................
EY934726       --> ..................................................
FD573244       --> ..................................................
FD555455       --> ..................................................
EW739227       --> ..................................................

               1201   -   1251
UN16295        --> TCGCTTCTCTCTCTCTCTCTCTGTATGTCTTCTTCTTCAATCCCCAGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW734026       <-- ..................................................
FD559813       <-- TCGCTTCTCTCTCTCTCTCTCTGTATGTCTTCTTCTTCAATCCCCAGAAA
FD565225       --> ..................................................
EV544292       --> ..................................................
FD574829       --> ..................................................
FD952488       --> ..................................................
FD545431       --> ..................................................
EY934726       --> ..................................................
FD573244       --> ..................................................
FD555455       --> ..................................................
EW739227       --> ..................................................

               1251   -   1301
UN16295        --> CAATCCTCTCTTGTTGGCTTTGCTTGCTTGCTTCCAAGAGCCTCAGAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW734026       <-- ..................................................
FD559813       <-- CAATCCTCTCTTGTTGGCTTTGCTTGCTTGCTTCCAAGAGCCTCAGAGAA
FD565225       --> ..................................................
EV544292       --> ..................................................
FD574829       --> ..................................................
FD952488       --> ..................................................
FD545431       --> ..................................................
EY934726       --> ..................................................
FD573244       --> ..................................................
FD555455       --> ..................................................
EW739227       --> ..................................................

               1301   -   1351
UN16295        --> CGATTCC
                   ~~~~~~~
EW734026       <-- .......
FD559813       <-- CGATTCC
FD565225       --> .......
EV544292       --> .......
FD574829       --> .......
FD952488       --> .......
FD545431       --> .......
EY934726       --> .......
FD573244       --> .......
FD555455       --> .......
EW739227       --> .......