1      -     51
UN16301        --> TTTTTTTTTCCGAAACCTTAGTGATAATTTCACTAGCAAAAAAGAGCGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973546       <-- .............aaaCTTAGTGATAATTTCACTAGCAAAAA-GAGCGAG
EX748239       <-- ..................................................
EX746956       <-- ..................................................
EX773423       <-- ..................................................
FD963573       <-- ..................................................
FD578373       <-- ..................................................
FD941584       <-- ..................................................
EX751255       --> TTTTTTTTTCCGAAACCTTAGTGATAATTTCACTAGCAAAAAAGAGCGAG
FD969217       --> ......ctatcaAAACCTTAGTGATAATTTCACTAGCAAAAAAGAGCGAG
EX777209       --> .............................................GCGAG
EV532247       --> ..................................................
EX752237       --> ..................................................

               51     -    101
UN16301        --> GAGAGTACTGGATACATTGTTGTACTACTAAAGAGAGAGACAAAACAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973546       <-- GAGAGTACTGGATACATTGTTGTACTACTAAAGAG-GAGACAAAACAGCA
EX748239       <-- ......................TACTACTAA-GAGAGAGACAAA-CAGCA
EX746956       <-- ........................CTACTAAAGAGAGAGACAAAACAGCA
EX773423       <-- ........................................acAAACAGCA
FD963573       <-- ..................................................
FD578373       <-- ..................................................
FD941584       <-- ..................................................
EX751255       --> GAGAGTACTGGATACATTGTTGTACTACTAAAGAGAGAGACAAAACAGCA
FD969217       --> GAGAGTACTGGATACATTGTTGTACTACTAAAGAG-GAGACAAAACAGCA
EX777209       --> GAGAGTACTGGATACATTGTTGTACTACTAAAGAGAGAGACAAAACAGCA
EV532247       --> ..................................................
EX752237       --> ..................................................

               101    -    151
UN16301        --> GATGTTATTGAATTGATTGTTTGCTGTTCTAAGGTACAAGTATCACAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973546       <-- GATGTTATTGAATTGGTTGTTTGCTGTTCTAAGGTACAAGTATCACAATC
EX748239       <-- GATGTTATTGAATTGATTGTTTGCTGTTCTAAGGTACAAGTATCACAATC
EX746956       <-- GATGTTATTGAATTGATTGTTTGCTGTTCTAAGGTACAAGTATCACAATC
EX773423       <-- GATGTTAT-GAATTGATTGTTTGCTGTTCTAAGGTACAAGTATCACAATC
FD963573       <-- .............................TAAGATACCAGTATCACAATC
FD578373       <-- ..................................................
FD941584       <-- ..................................................
EX751255       --> GATGTTATTGAATTGATTGTTTGCTGTTCTAAGGTACAAGTATCACAATC
FD969217       --> GATGTTATTGAATTGGTTGTTTGCTGTTCTAAGGTACAAGTATCACAATC
EX777209       --> GATGTTATTGAATTGATTGTTTGCTGTTCTAAGGTACAAGTATCACAATC
EV532247       --> GATGTTATTGAATCGAGTGTTTGCTGTTCTAAGATACCAGTATCACAATC
EX752237       --> ..................................................

               151    -    201
UN16301        --> TTCTAGTCAACAGAAGATGTTATCTGACAAAA----GACACCTTTAGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973546       <-- TTCTAGTCAACAGAAGATGTTATCTGACAAAA----GACACCTTTAGATT
EX748239       <-- TTCTAGTCAACAGAAGATGTTATCTGACAAAA----GACACCTTTAGATT
EX746956       <-- TTCTAGTCAACAGAAGATGTTATCTGGCAAAA----GACACCTTTAGATT
EX773423       <-- TTCTAGTCAACAGAAGATGTTATCTGACAAAA----GACACCTTTAGATT
FD963573       <-- TTCTAGTCAACAGAAGATGTTATCTAACAAAACAAAGACACCTTTAGATT
FD578373       <-- ...............................................ATT
FD941584       <-- ..................................................
EX751255       --> TTCTAGTCAACAGAAGATGTTATCTGGCAAAA----GACACCTTTAGATT
FD969217       --> TTCTAGTCAACAGAAGATGTTATCTGACAAAA----GACACCTTTAGATT
EX777209       --> TTCTAGTCAACAGAAGATGTTATCTGACAAAA----GACACCTTTAGATT
EV532247       --> TTCTAGTCAACAGAAGATGTTATCTAACAAAACAAAGACACCTTTAGATT
EX752237       --> ......................TCTGACAAAA----GACACCTTTAGATT

               201    -    251
UN16301        --> GTTGAACCAA-TCTCTTTTCAGGACGACGAAGCTGTCTCCACCGTAGTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973546       <-- GTTGAACCAA-TCTCTTTTCAGGACGACGAAGCTGTCTCCACCGTAGTGG
EX748239       <-- GTTGAACCAA-TCTCTTTTCAGGACGACGAAGCTGTCTCCACTGTAGTGG
EX746956       <-- GTTGAACCAA-TCTCTTTTCAGGACGACGAAGCTGTCTCCACTGTAGTGG
EX773423       <-- GTTGAACCAA-TCTCTTTTCAGGACGACGAAGCTGTCTCCACCGTAGTGG
FD963573       <-- GTTGAATCAAATCTCTTTTCAGGACGACGAAGCTGTCTCCACCGTAGTCG
FD578373       <-- GTTGAACCAA-TCTCTTT-CAGGACGACGAAGCTGTCTCCACCGTAGTGG
FD941584       <-- ..................................................
EX751255       --> GTTGAACCAA-TCTCTTTTCAGGACGACGAAGCTGTCTCCACTGTAGTGG
FD969217       --> GTTGAACCAA-TCTCTTTTCAGGACGACAAAGCTGTCTCCACCGTAGTGG
EX777209       --> GTTGAACCAA-TCTCTTTTCAGGACGACGAAGCTGTCTCCACCGTAGTGG
EV532247       --> GTTGAATCAAATCTCTTTTCAGGACGACGAAGCTGTCTCCACCGTAGTCG
EX752237       --> GTTGAACCAA-TCTCTTTTCAGGACGACGAAGCTGTCTCCACTGTAGTGG

               251    -    301
UN16301        --> ACTTGGCCATTGCCGCTTTAGTGTAGATAGGGTGAAGAACATGACCTCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973546       <-- ACTTGGCCATTGCAGCTTTAGTGTAGATAGGGTGAAGAACATGACCTCCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX748239       <-- ACTTGGCCATTGCCGCTTTAGTGTAGATAGGGTGAAGAACATGACCTCCC  Raphanus raphanistrum subsp. maritimus
EX746956       <-- ACTTGGCCATTGCCGCTTTAGTGTAGATAGGGTGAAGAACATGACCTCCC  Raphanus raphanistrum subsp. maritimus
EX773423       <-- ACTTGGCCATTGCCGCTTTAGTGTAGATAGGGTGAAGAACATGACCTCCC  Raphanus raphanistrum subsp. landra
FD963573       <-- ACTTGGCCATTGCAGCTTTAGTGTAGATAGGGTGAAGAACATGACCTCCC  Raphanus raphanistrum subsp. maritimus
FD578373       <-- ACTTGGCCATTGCCGCTTTAGTGTAGATAGGGTGAAGAACATGACCTCCC  Raphanus sativus cv Rat-Tail Radish #3870
FD941584       <-- ..................................................  Raphanus sativus var. oleiformis
EX751255       --> ACTTGGCCATTGCCGCTTTAGTGTAGATAGGGTGAAGAACATGACCTCCC  Raphanus raphanistrum subsp. maritimus
FD969217       --> ACTTGGCCATTGCAGCTTTAGTGTAGATAGGGTGAAAAACATGACCTCCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX777209       --> ACTTGGCCATTGCCGCTTTAGTGTAGATAGGGTGAAGAACATGACCTCCC  Raphanus raphanistrum subsp. landra
EV532247       --> ACTTGGCCATTGCAGCTTTAGTGTAGATAGGGTGAAGAACATGACCTCCC  Raphanus raphanistrum subsp. maritimus
EX752237       --> ACTTGGCCATTGCCGCTTTAGTGTAAATAGGGTGAAGAACATGACCTCCC  Raphanus raphanistrum subsp. maritimus

               301    -    351
UN16301        --> TTAGGATCAACATGAATCCATTTGCGTCCAGTGATCTTGTTTTTCTCGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973546       <-- TTAGGATCAACATGAATCCATTTGCGTCCAGTGATCTTGTTTTTCTCGAA
EX748239       <-- TTAGGATCAACATGAATCCATTTGCGTCCAGTGATCTTGTTTTTCTCGAA
EX746956       <-- TTAGGATCAACATGAATCCATTTGCGTCCAGTGATCTTGTTTTTCTCGAA
EX773423       <-- TTAGGATCAACATGAATCCATTTGCGTCCAGTGATCTTGTTTT-CTCGAA
FD963573       <-- TTAGGATCAACATGAATCCATTTGCGTCCAGTGATCTTGTTTTTCTCGAA
FD578373       <-- TTAGGATCAACATGAATCCATTTGCGTCCAGTGATCTTGTTTTTCTCGAA
FD941584       <-- ..................................................
EX751255       --> TTAGGATCAACATGAATCCATTTGCGTCCAGTGATCTTGTTTTTCTCGAA
FD969217       --> TTAGGATCAACATGAATCCATTTGCGTCCAGTGATCTTGTTTTTCTCGAA
EX777209       --> TTAGGATCAACATGAATCCATTTGCGTCCAGTGATCTTGTTTT-CTCGAA
EV532247       --> TTAGGATCAACATGAATCCATTTGCGTCCAGTGATCTTGTTTTTCTCGAA
EX752237       --> TTAGGATCAACATGAATCCATTTGCGTCCAGTGATCTTGTTTTTCTCGAA

               351    -    401
UN16301        --> CCTGACTCGTCCTTCCTTCAATGCAAACAGAGTATGGTCCTTCCCAATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973546       <-- CCTGACTCGTCCTTCCTTCAATGCAAACAGAGTATGGTCCTTCCCAATCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX748239       <-- CCTGACTCGTCCTTCCTTCAATGCAAACAGAGTATGGTCCTTCCCAATCC  Raphanus raphanistrum subsp. maritimus
EX746956       <-- CCTGACTCGTCCTTCCTTCAATGCAAACAGAGTATGGTCCTTCCCAATCC  Raphanus raphanistrum subsp. maritimus
EX773423       <-- CCTGACTCGTCCTTCCTTCAATGCAAACAGAGTATGGTCCTTTCCGATCC  Raphanus raphanistrum subsp. landra
FD963573       <-- CCTGACTCGTCCTTCCTTCAATGCGAACAGAGTATGGTCCTTCCCGATCC  Raphanus raphanistrum subsp. maritimus
FD578373       <-- CCTGACTCGTCCTTCCTTCAATGCAAACAGAGTATGGTCCTTCCCAATCC  Raphanus sativus cv Rat-Tail Radish #3870
FD941584       <-- ..................................................  Raphanus sativus var. oleiformis
EX751255       --> CCTGACTCGTCCTTCCTTCAATGCAAACAGAGTATGGTCCTTCCCAATCC  Raphanus raphanistrum subsp. maritimus
FD969217       --> CCTGACTCGTCCTTCCTTCAATGCAAACAGAGTATGGTCCTTCCCAATCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX777209       --> CCTGACTCGTCCTTCCTTCAATGCAAACAGAGTATGGTCCTTTCCGATCC  Raphanus raphanistrum subsp. landra
EV532247       --> CCTGACTCGTCCTTCCTTCAATGCGAACAGAGTATGGTCCTTCCCGATCC  Raphanus raphanistrum subsp. maritimus
EX752237       --> CCTGACTCGTCCTTCCTTCAATGCAAACAGAGTATGGTCCTTCCCAATCC  Raphanus raphanistrum subsp. maritimus

               401    -    451
UN16301        --> CGACATAGTCTCCCGGATGAAAACGAGTTCCACGTTGACGGACTATTATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973546       <-- CGACATAGTCTCCCGGATGAAAACGAGTTCCACGTTGACGGACTATTATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX748239       <-- CGACATAGTCTCCCGGATGAAAACGAGTTCCACGTTGACGGACTATTATG  Raphanus raphanistrum subsp. maritimus
EX746956       <-- CGACATAGTCTCCCGGATGAAAACGAGTTCCACGTTGACGGACTATTATG  Raphanus raphanistrum subsp. maritimus
EX773423       <-- CGACATAGTCTCCCGGATGAAACCGAGTTCCACGTTGACGGACGATTATG  Raphanus raphanistrum subsp. landra
FD963573       <-- CAACATAGTCTCCGGGATGAAACCGAGTTCCACGTTGACGGACTATTATG  Raphanus raphanistrum subsp. maritimus
FD578373       <-- CGACATAGTCTCCCGGATGGAAACGAGTTCCACGTTGACGGACTATTATG  Raphanus sativus cv Rat-Tail Radish #3870
FD941584       <-- ..................................................  Raphanus sativus var. oleiformis
EX751255       --> CGACATAGTCTCCCGGATGAAAACGAGTTCCACGTTGACGGACTATTATG  Raphanus raphanistrum subsp. maritimus
FD969217       --> CGACATAGTCTCCCGGATGAAAACGAGTTCCACGTTGACGGACTATTATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX777209       --> CGACATAGTCTCCCGGATGAAACCGAGTTCCACGTTGACGGACGATTATG  Raphanus raphanistrum subsp. landra
EV532247       --> CAACATAGTCTCCGGGATGAAACCGAGTTCCACGTTGACGGACTATTATG  Raphanus raphanistrum subsp. maritimus
EX752237       --> CGACATAGTCTCCCGGATGAAAACGAGTTCCACGTTGACGGACTATTATG  Raphanus raphanistrum subsp. maritimus

               451    -    501
UN16301        --> TTTCCCGGTATCACATTCTCTCCTCCGAACTTCTTGACGCCGAGATTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973546       <-- TTTCCCGGTATCACATTCTCTCCTCCGAATTTCTTGACGCCGAGATTCTT
EX748239       <-- TTTCCCGGTATCACATTCTCTCCTCCGAACTTCTTGACGCCGAGATTCTT
EX746956       <-- TTTCCCGGTATCACATTCTCTCCTCCGAACTTCTTGACGCCGAGATTCTT
EX773423       <-- TTTCCCGGTATCACATTCTCTCCTCCGAACTTCTTGACGCCGAGATTCTT
FD963573       <-- TTTCCCGGTATCACATTCTCTCCTCCGAACTTCTTGACGCCGAGATTCTT
FD578373       <-- TTTCCCGGTATCACATTCTCTCCTCCGAACTTCTTGACGCCGAGATTCTT
FD941584       <-- ..................................................
EX751255       --> TTTCCCGGTATCACATTCTCTCCTCCGAACTTCTTGACGCCGAGATTCTT
FD969217       --> TTTCCCGGTATCACATTCTCTCCTCCGAATTTCTTGACGCCGAGATTCTT
EX777209       --> TTTCCCGGTATCACATTCTCTCCTCCGAACTTCTTGACGCCGAAATTCTT
EV532247       --> TTTCCCGGTATCACATTCTCTCCTCCGAACTTCTTGACGCCGAGATTCTT
EX752237       --> TTTCCCGGTATCACATTCTCTCCTCCGAACTTCTTGACGCCGAGATTCTT

               501    -    551
UN16301        --> GGGCTTAGAGTCACGTCCGTTCTTGGTGGAACCGGCGGTTTTCTTAGTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973546       <-- GGGCTTAGAGTCACGTCCGTTCTTGGTGGAACCGGCGGTTTTCTTAGTAG
EX748239       <-- GGGCTTAGAGTCACGTCCGTTCTTGGTGGAACCGGCGGTTTTCTTAGTAG
EX746956       <-- GGGCTTAGAGTCACGTCCGTTCTTGGTGGAACCGGCGGTTTTCTTAGTAG
EX773423       <-- GGGCTTAGAGTCACGTCCGTTCTTGGTGGAACCGGCGGTTTTCTTAGTAG
FD963573       <-- GGGCTTAGAGTCACGTCCGTTCTTGGTGGAACCGGCGGTTTTCTTAGTAG
FD578373       <-- GGGCTTAGAGTCACGTCCGTTCTTGGTGGAACCGGCGGTTTTCTTAGTAG
FD941584       <-- ..................................................
EX751255       --> GGGCTTAGAGTCACGTCCGTTCTTGGTGGAACCGGCGGTTTTCTTAGTAG
FD969217       --> GGGCTTAGAGTCACGTCCGTTCTTGGTGGAACCGGCGGTTTTCTTAGTAG
EX777209       --> GGGCTTAAAGTCACGTCCGTTCTTGGTGGAACCGGCGGTTTTCTTAGTAG
EV532247       --> GGGCTTAGAGTCACGTCCGTTCTTGGTGGAACCGGCGGTTTTCTTAGTAG
EX752237       --> GGGCTTAAAGTCACGTCCGTTCTTGGTGGAACCGGCGGTTTTCTTAGTAG

               551    -    601
UN16301        --> CCCAACGCTTTAACACCAAACTCAACCCACTTGAAGAACAATCGGAGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973546       <-- CCCAACGCTTCAACACTAAACTCAACCCACTCGAGGAACAATCGGAGATG
EX748239       <-- CCCAAAGCTTTAACACCAAACTCAACCCACTTGAAGAACAATCGGAGATG
EX746956       <-- CCCAACGCTTTAACACCAAACTCAACCCACTTGAAGAACAATCGGAGATG
EX773423       <-- CCCAACGCTTTAACACCAAACTCAACCCACTTGAAGAACAATCGGAGATG
FD963573       <-- CCCAACGCTTTAACACCAAACTCAACCCAGTTGAAGAACAATCGGAGATG
FD578373       <-- CCCAACGCTTTAACACCAAACTCAACCCACTTGAAGAACAATCGGAGATG
FD941584       <-- ..................................................
EX751255       --> CCCAACGCTTTAACACCAAACTCAACCCACTTGAAGAACAATCGGAGATG
FD969217       --> CCCAACGCTTCAACACTAAACTCAACCCACTCGAGGAACAATCGGAGATG
EX777209       --> CCCAACGCTTTAACACCAAACTCAACCCACTTGAAGAACAATCGGAGATG
EV532247       --> CCCAACGCTTTAACACCAAACTCAACCCACTTGAAGAACAATCGGAGATG
EX752237       --> CCCAAAGCTTTAACACCAAACTCAACCCACTTGAAGAACAATCGGAGATG

               601    -    651
UN16301        --> CCACTGCCACCGTAAGCAGGAACCTCGGTGATAAGTTCCCTCAAACTAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973546       <-- CCACTGCCACCGTAAGCAGGAACCTCGGTGATGAGCTCCCTCAAACTAAC
EX748239       <-- CCACTGCCACCGTAAGCAGGAACCTCGGTGATAAGTTCCCTCAAACTAAC
EX746956       <-- CCACTGCCACCGTAAGCAGGAACCTCGGTGATAAGTTCCCTCAAACTAAC
EX773423       <-- CCACTGCCACCGTAAGCAGGAACCTCGGTGATAAGTTCCCTCAAACTAAC
FD963573       <-- CCACTGCCACCGTAAGCAGGAACCTCGGTGATAAGTTCCCTCAAACTAAC
FD578373       <-- CCACTGCCACCGTAAGCAGGAACCTCGGTGATAAGTTCCCTCAAACTAAC
FD941584       <-- ..............................ATAAGTTCCCTCAAACTAAC
EX751255       --> CCACTGCCACCGTAAGCAGGAACCTCGGTGATAAGTTCCCTCAAACTAAC
FD969217       --> CCACTGCCACCGTAAGCAGGAACCTCGGTGATGAGCTCC...........
EX777209       --> CCACTGCCACCGTAAGCAGGAACCTCGGTGATAAGTTCCCTCAAACTAAC
EV532247       --> CCACTGCCACCGTAAGCAGGAACCTCGGTGATAAGTTCCCTCAAACTAAC
EX752237       --> CCACTGCCACCGTAAGCAGGAACCTCGGTGATAAGTTCCCTCAAACTAAC

               651    -    701
UN16301        --> TCTTCTGCATAAGGATGCTGCTGAGTTTAAGAAATTCATTTT-GTGCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973546       <-- TCTTCTGCATAAGGATGCTGCTGAGTTTAAGAAATTCATTTC-TTGCACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX748239       <-- TCTTCTGCATAAGGATGCTGCTGAGTTTAAGAAATTCATTTT-GTGCAGA  Raphanus raphanistrum subsp. maritimus
EX746956       <-- TCTTCTGCATAAGGATGCTGCTGAGTTTAAGAAATTCATTTT-GTGCAGA  Raphanus raphanistrum subsp. maritimus
EX773423       <-- TCTTCTGCATAAGGATGCTGCTGAGTTTAAGAAATTCATTTTTGTGCAGA  Raphanus raphanistrum subsp. landra
FD963573       <-- TCTTCTGCATAAGGATGCTGCTGAGTTTAAGAAATTCATTTT-GTGCAGA  Raphanus raphanistrum subsp. maritimus
FD578373       <-- TCTTCTGCATAAGGATGCTGCTGAGTTTAAGAAATTCATTTTTGTGCAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD941584       <-- TCTTCTGCATAAGGATGCTGCTGAGTTTAAGAAATTCATTTTTGTGCAGA  Raphanus sativus var. oleiformis
EX751255       --> TCTTCTGCATAAGGATGCTGCTGAGTTTAAGAAATTCATTTT-GTGCAGA  Raphanus raphanistrum subsp. maritimus
FD969217       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX777209       --> TCTTCTGCATAAGGATGCTGCTGAGTTTAAGAAATTCATTTTTGTGCAGA  Raphanus raphanistrum subsp. landra
EV532247       --> TCTTCTGCATAAGGATGCTGCTGAGTTTAAGAAATTCATTTT-GTGCAGA  Raphanus raphanistrum subsp. maritimus
EX752237       --> TCTTCTGCATAAGGATGCTGCTGAGTTTAAGAAATTCATTTT-GTGCAGA  Raphanus raphanistrum subsp. maritimus

               701    -    751
UN16301        --> AATCAGAAATTTTCGATTCCAGGACACTGCGACCGGTGATAAATGTGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973546       <-- AACCGGAAATTTTCGATTCCAGTACACTGCGACAGGTGATAAATGTGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX748239       <-- AATCAGAAATTTTCGATTCTAGGACACTGCGACCGGTGATAAATGTGATC  Raphanus raphanistrum subsp. maritimus
EX746956       <-- AATCAGAAATTTTCGATTCCAGGACACTGCGACCGGTGATAAATGTGATC  Raphanus raphanistrum subsp. maritimus
EX773423       <-- AATCAGAAATTTTCGACTCCAGTACACTGCGACCGGTGATAAATGTGATC  Raphanus raphanistrum subsp. landra
FD963573       <-- AATCAGAAATTTTCGATTCCAGGACACTGCGACCGGTGATAAATGTGATC  Raphanus raphanistrum subsp. maritimus
FD578373       <-- AATCAGAAATTTTCGACTCCAGTGCACTGCGACCGGTGATAAATGTGATC  Raphanus sativus cv Rat-Tail Radish #3870
FD941584       <-- AATCAGAAATTTTCGACTCCAGTACACTGCGACCGGTGATAAATGTGATC  Raphanus sativus var. oleiformis
EX751255       --> AATCAGAAATTTTCGATTCCAGGACACTGCGACCGGTGATAAATGTGATC  Raphanus raphanistrum subsp. maritimus
FD969217       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX777209       --> AATCAGAAATTTTCGACTCCAGTACACTGCGACCGGTGATAAATGTGATC  Raphanus raphanistrum subsp. landra
EV532247       --> AATCAGAAATTTTCGATTCCAGGACACTGCGACCGGTGATAAATGTGATC  Raphanus raphanistrum subsp. maritimus
EX752237       --> AATCAGAAATTTTCGATTCTAGGACACTGCGACC................  Raphanus raphanistrum subsp. maritimus

               751    -    801
UN16301        --> GGAGGCGACGGCGTGTAGAGGGAAAGGGCTCAACTCCAGAAAGGGAAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973546       <-- GGAGGCGACGGTGAGTAGAGGGAAAGGGCTTAACTCtcc...........
EX748239       <-- GGAGGCGACGGCGTGTAGAGGGGAAGGGCTCAACTCCAGAAAGGGAAAAC
EX746956       <-- GGAGGCGACGGCGTGTcc................................
EX773423       <-- GGAGGCGACTGCGTGTAGAGGGAAAGGGCTCAACTCC.............
FD963573       <-- GGAGGCGACGGCGTGTAGAGGGAAAGGGCTCAACTCCAGAAAGGGAAAAC
FD578373       <-- GGAGGCGACGGCGTGTAGAGGGAAAGGGCTCAACTCCAGAAAGGAAAAAC
FD941584       <-- GGAGGCGACTGCGTcc..................................
EX751255       --> GGAGGCGACGGCGTGTcc................................
FD969217       --> ..................................................
EX777209       --> GGAGGCGACTGCGTGTAGAGGGAAAGGGCTCAACTCC.............
EV532247       --> GGAGGCGACGGCGTGTAGAGGGAAAGGGCTCAACTCCAGAAAGGGAAAAC
EX752237       --> ..................................................

               801    -    851
UN16301        --> CTTATTCGCAAGTGTGAAAACTATACCCACCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973546       <-- .................................
EX748239       <-- CTTATTCGCAAGTGTcc................
EX746956       <-- .................................
EX773423       <-- .................................
FD963573       <-- CTTATTCGCAAGTGTcc................
FD578373       <-- CTTATTCGCAAGTGTGAAAACTATACCCACCCC
FD941584       <-- .................................
EX751255       --> .................................
FD969217       --> .................................
EX777209       --> .................................
EV532247       --> CTTATTCGCAAGTGTcc................
EX752237       --> .................................