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Alignment for radish unigene UN16303

               1      -     51
UN16303        --> GGACTCCATTATTAATCAATTAGCTCATTACAGAGAAACGACCAAACAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959530       <-- GGACTCCATTATTAATCAATTAGCTCATTACAGAGAAACGACCAAACAGA
EV574759       <-- .....................................ggGACCAAACAGA
FD983380       <-- .....................................ggGACCAAACAGA
EY919476       <-- ..................................................
FD552368       <-- ..................................................
EY920699       <-- ..................................................
FD936280       <-- ..................................................
FD963141       --> GGACTCCATTATTAATCAATTAGCTCATTACAGAGAAACGACCAAACAGA
FD555987       --> ..............................ggggaAAACGACCAAACAGA
EV570487       --> .....................................ggGACCAAACAGA
EY923717       --> .....................................ggGACCAAACAGA
EY925162       --> .....................................ggGACCAAACAGA
FD963528       --> .....................................ggGACCAAACAGA
EX887990       --> ..................................................

               51     -    101
UN16303        --> AAGAAAAAAAA-A-CATGGCAACTCAAGCGTCCGGACTCTTTAGCTCCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959530       <-- A-GAAAAAAAAGA-CATGGCAACTCAAGCGTCCGGACTCTTTAGCTCCGC
EV574759       <-- AAGAAAAAAAA-AACATGGCAACTCAAGCGTCCGGACTCTTTAGCTCCGC
FD983380       <-- AAGAAAAAAAA-AACATGACAACTCAAGCGTCCGGACTCTTTAGCTCCGC
EY919476       <-- ....................................CTCTTTAGCTCCGC
FD552368       <-- ..................................................
EY920699       <-- ..................................................
FD936280       <-- ..................................................
FD963141       --> A-GAAAAAAAAGA-CATGGCAACTCAAGCGTCCGGACTCTTTAGCTCCGC
FD555987       --> AAGAAAAAAAA-A-CATGGCAACTCAAGCGTCCGGACTCTTTGGCTCCGC
EV570487       --> AAGAAAAAAAA-AACATGGCAACTCAAGCGTCCGGACTCTTTAGCTCCGC
EY923717       --> AAGAAAAAAAA-A-CATGGCAACTCAAGCGTCCGGACTCTTTAGCTCCGC
EY925162       --> AAGAAAAAAAA-A-CATGGCAACTCAAGCGTCCGGACTCTTTAGCTCCGC
FD963528       --> AGAAAAAAAAAGA-CATGGCAACTCAAGCGTCCGGACTCTTTAGCTCCGC
EX887990       --> ..................................................

               101    -    151
UN16303        --> CATAACAACCACAGCAACCTCCGGTGTGAAAAAA-CTCCACTTTTTCACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959530       <-- CATAACAACCACAGCAACCTCCGGTGTGAAAAAA-CTCCACTTTTTCACA
EV574759       <-- CATAACAACCACAGCAACCTCCGGTGTGAAAAAA-CTCCACTTTTCCACA
FD983380       <-- CATAACAACCACAGCAACCTCCGGTGTGAAAAAA-CTCCACTTTTTCACA
EY919476       <-- CATAACAACCACAGCAACCTCCGGTGTGAAAAAA-CTCCACTTTTTCACA
FD552368       <-- ..................................................
EY920699       <-- ..................................................
FD936280       <-- ..................................................
FD963141       --> CATAACAACCACAGCAACCTCCGGTGTGAAAAAA-CTCCACTTTTTCACA
FD555987       --> CATAACAACCACAGCAACCTCCGGTGTGAAAAAA-CTCCACTTTTTCACA
EV570487       --> CATAACAACCACAGCAACCTCCGGTGTGAAAAAA-CTCCACTTTTTCACA
EY923717       --> CATAACAACCACAGCAACCTCCGGTGTGAAAAAA-CTCCACTTTTTCACA
EY925162       --> CATAACAACCACAGCAACCTCCGGTGTGAAAAAA-CTCCACTTTTTCACA
FD963528       --> CATAACAACCACAGCAACCTCCGGTGTGAAAAAAACTCCACTTTTTCACA
EX887990       --> ..................................................

               151    -    201
UN16303        --> ACATCCGCCCGTCCAAGATCCCTCTCCCTCACCAAAACCGCAATCCGCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959530       <-- ACATCCGCCCGTCCAAGATCCCTCTCCCTCACCAAAACCGCAATCCGCGC
EV574759       <-- ACATCCGCCCGTCCAAGATCCCTCTCCCTCACCAAAACCGCAATCCGCGC
FD983380       <-- ACATCCGCCCGTCCAAGATCCCTCTCCCTCACCAAAACCGCAATCCGCGC
EY919476       <-- ---ACCGCCCGTCCAAGATCCCTCTCCCTCACCAAAACCGCAATCCGCGC
FD552368       <-- ....CCGCCCGTCCAAGATCCCTCTCC-TCACCAAAACCGCAATCCGCGC
EY920699       <-- ................GATCCCTCTCCCTCACCAAAACCGCAATCCGCGC
FD936280       <-- ..................................................
FD963141       --> ACATCCGCCCGTCCAAGATCCCTCTCCCTCACCAAAACCGCAATCCGCGC
FD555987       --> ACATCCGCCCGTCCAAGATCCCTCTCC-TCACCAAAACCGCAATCCGCGC
EV570487       --> ACATCCGCCCGTCCAAGATCCCTCTCCCTCACCAAAACCGCAATCCGCGC
EY923717       --> AC---CGCCCGTCCAAGATCCCTCTCCCTCACCAAAACCGCAATCCGCGC
EY925162       --> AC---CGCCCGTCCAAGATCCCTCTCCCTCACCAAAACCGCAATCCGCGC
FD963528       --> ACATCCGCCCGTCCAAGATCCCTCTCCCTCACCAAAACCGCAATCCGCGC
EX887990       --> ..................................................

               201    -    251
UN16303        --> CGAGAAAACAGATTCCGCCGCCGCCGCCCCAGCCCCCGCCGTGAAAGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959530       <-- CGAGAAAACAGATTCCGCCGCCG---CCCCAGCCCCCGCCGTGAAAGAAG
EV574759       <-- CGAGAAAACAGATTCCGCCGCCGCCGCCCCAGCCCCCGCCGTGAAAGAAG
FD983380       <-- CGAGAAAACAGATTCCGCCGCCGCCGCCCCAGCCCCCGCCGTGAAAGAAG
EY919476       <-- CGAGAAAACATATTCCGCCGCCGCCGCCCCAGCCCCCGCCGTGAAAGAAG
FD552368       <-- CGAGAAAACAGATTCCGCCGCCGCCGCCCCAGCCCCCGCCGTGAAAGAAG
EY920699       <-- CGAGAAAACATATTCCGCCGCCGCCGCCCCAGCCCCCGCCGTGAAAGAAG
FD936280       <-- ..................................................
FD963141       --> CGAGAAAACAGATTCCGCCGCCGCC---CCAGCCCCCGCCGTGAAAGAAG
FD555987       --> CGAGAAAACAGATTCCGCCGCCGCCGCCCCAGCCCCCGCCGTGAAAGAAG
EV570487       --> CGAGAAAACAGATTCCGCCGCCGCCGCCCCAGCCCCCGCCGTGAAAGAAG
EY923717       --> CGAGAAAACATATTCCGCCGCCGCCGCCCCAGCCCCCGCCGTGAAAGAAG
EY925162       --> CGAGAAAACATATTCCGCCGCCGCCGCCCCAGCCCCCGCCGTGAAAGAAG
FD963528       --> CGAGAAAACAGATTCCGCCGCCGCCGCCCCAGCCCCCGCCGTGAAAGAAG
EX887990       --> ..................................................

               251    -    301
UN16303        --> CTCCGGTGGGATTCACGCCGCCTCAGCTAGACCCAAACACACCGTCACCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959530       <-- CTCCGGTGGGATTCACGCCGCCTCAGCTAGACCCAAACACACCGTCACCG
EV574759       <-- CTCCGGTGGGATTCACGCCGCCTCAGCTAGACCCAAACACACCGTCACCG
FD983380       <-- CTCCGGTGGGATTCACGCCGCCTCAGCTAGACCCAAACACACCGTCACCG
EY919476       <-- CTCCGGTGGGATTCACGCCGCCTCAGCTAGACCCAAACACACCGTCACCG
FD552368       <-- CTCCGGTGGGATTCACGCCGCCTC-TCTAGACCCAAACACACCGTCACCG
EY920699       <-- CTCCGGTGGGATTCACGCCGCCTCAGCTAGACCCAAACACACCGTCACCG
FD936280       <-- ..................................................
FD963141       --> CTCCGGTGGGATTCACGCCGCCTCAGCTAGACCCAAACACACCGTCACCG
FD555987       --> CTCCGGTGGGATTCACGCCGCCTC-TCTAGACCCAAACACACCGTCACCG
EV570487       --> CTCCGGTGGGATTCACGCCGCCTCAGCTAGACCCAAACACACCGTCACCG
EY923717       --> CTCCGGTGGGATTCACGCCGCCTCAGCTAGACCCAAACACACCGTCACCG
EY925162       --> CTCCGGTGGGATTCACGCCGCCTCAGCTAGACCCAAACACACCGTCACCG
FD963528       --> CTCCGGTGGGATTCACGCCGCCTCAGCTAGACCCAAACACACCGTCACCG
EX887990       --> ............................................gCACCG

               301    -    351
UN16303        --> ATCTTCGCGGGAAGCACCGGTG-GGCTTCTCCGCAAAGCCCAGGTGGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959530       <-- ATCTTCGCGGGGAGCACCGGTG-GGCTTCTCCGCAAAGCCCAGGTGGAAG
EV574759       <-- ATCTTCGCGGGAAGCACCGGTG-GGCTTCTCCGCAAAGCCCAGGTGGAAG
FD983380       <-- ATCTTCGCGGGAAGCACCGGTG-GGCTTCTCCGCAAAGCCCAGGTGGAAG
EY919476       <-- ATCTTCGCGGGAAGCACCGGTG-GGCTTCTCCGCAAAGCCCAGGTGGAAG
FD552368       <-- ATCTTCGCGGGAAGCACCGGTG-GGCTTCTCCGCAAAGCCCAGGTGGAAG
EY920699       <-- ATCTTCGCGGGAAGCACCGGTG-GGCTTCTCCGCAAAGCCCAGGTGGAAG
FD936280       <-- ..................................................
FD963141       --> ATCTTCGCGGGGAGCACCGGTGAGGCTTCTCCGCAAAGCCCAGGTGGAAG
FD555987       --> ATCTTCGCGGGAAGCACCGGTG-GGCTTCTCCGCAAAGCCCAGGTGGAAG
EV570487       --> ATCTTCGCGGGAAGCACCGGTG-GGCTTCTCCGCAAAGCCCAGGTGGAAG
EY923717       --> ATCTTCGCGGGAAGCACCGGTG-GGCTTCTCCGCAAAGCCCAGGTGGAAG
EY925162       --> ATCTTCGCGGGAAGCACCGGTG-GGCTTCTCCGCAAAGCCCAGGTGGAAG
FD963528       --> ATCTTCGCGGGGAGCACCGGTG-GGCTTCTCCGCAAAGCCCAGGTGGAAG
EX887990       --> ATCTTCGCGGGAAGCACCGGTG-GGCTTCTCCGCAAAGCCCAGGTGGAAG

               351    -    401
UN16303        --> AGTTCTACGTTATTACATGGAACTCGCCGAAAGAGCAGATCTTTGAGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959530       <-- AGTTCTACGTTATTACATGGAACTCGCCGAAAGAGCAGATCTTTGAGATG
EV574759       <-- AGTTCTACGTTATTACATGGAACTCGCCGAAAGAGCAGATCTTTGAGATG
FD983380       <-- AGTTTTACGTTATTACATGGAACTCGCCGAAAGAGCAGATCTTTGAGATG
EY919476       <-- AGTTTTACGTTATTACATGGAACTCGCCGAAAGAGCAGATCTTTGAGATG
FD552368       <-- AGTTCTACGTTATTACATGGAACTCGCCGAAAGAGCAGATCTTTGAGATG
EY920699       <-- AGTTCTACGTTATTACATGGAACTCGCCGAAAGAGCAGATCTTTGAGATG
FD936280       <-- ..................................................
FD963141       --> AGTTCTACGTTATTACATGGAACTCGCCGAAAGAGCAGATCTTTGAGATG
FD555987       --> AGTTCTACGTTATTACATGGAACTCGCCGAAAGAGCAGATCTTTGAGATG
EV570487       --> AGTTCTACGTTATTACATGGAACTCGCCGAAAGAGCAGATCTTTGAGATG
EY923717       --> AGTTCTACGTTATTACATGGAACTCGCCGAAAGAGCAGATCTTTGAGATG
EY925162       --> AGTTCTACGTTATTACATGGAACTCGCCGAAAGAGCAGATCTTTGAGATG
FD963528       --> AGTTCTACGTTATTACATGGAACTCGCCGAAATAGCAGATCTTTGAGATG
EX887990       --> AGTTCTACGTTATTACATGGAACTCGCCGAAAGAACAGATCTTTGAGATG

               401    -    451
UN16303        --> CCGACGGGAGGTGCGGCGATCATGAGGGAAGG-TCCGAACTTGCTGAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959530       <-- CCGACGGGAGGTGCGGCGATCATGAGGGAAGG-TCCGAACTTGCTGAAGC
EV574759       <-- CCGACGGGAGGTGCGGCGATCATGAGGGAAGG-TCCGAACTTGCTGAGGC
FD983380       <-- CCGACGGGAGGTGCGGCGATCATGAGGGAAGG-TCCGAACTTGCTGAAGC
EY919476       <-- CCGACGGGAGGTGCGGCGATCATGAGGGAAGG-TCCGAACTTGCTGAAGC
FD552368       <-- CCGACGGGAGGTGCGGCGATCATGAGGGAAGG-TCCGAACTTGCTGAAGC
EY920699       <-- CCGACGGGAGGTGCGGCGATCATGAGGGAAGG-TCCGAACTTGCTGAAGC
FD936280       <-- ..................................................
FD963141       --> CCGACGGGAGGTGCGGCGATCATGAGGGAAGGGTCCGAACTTGCTGAAGC
FD555987       --> CCGACGGGAGGTGCGGCGATCATGAGGGAAGG-TCCGAACTTGCTGAAGC
EV570487       --> CCGACGGGAGGTGCGGCGATCATGAGGGAAGG-TCCGAACTTGCTGAGGC
EY923717       --> CCGACGGGAGGTGCGGCGATCATGAGGGAAGG-TCCGAACTTGCTGAAGC
EY925162       --> CCGACGGGAGGTGCGGCGATCATGAGGGAAGG-TCCGAACTTGCTGAAGC
FD963528       --> CCGACGGGAGGTGCGGCGATCATGAGGGAAGG-TCCGAACTTGCTGAAGC
EX887990       --> CCGACGGGAGGTGCGGCGATCATGAGGGAAGG-TCCGAACTTGCTGAAGC

               451    -    501
UN16303        --> TGGCGAGGAAAGAACAGTGCTTGGCTTTGGGGACAAG-GCTTAGGTCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959530       <-- TGGCGAGGAAAGAACAGTGTTTGGCTTTGGGGACAAG-GCTTAGGTCCAA  Raphanus raphanistrum subsp. maritimus
EV574759       <-- TGGCGAGGAAAGAACAGTGCTTGGCTTTGGGGACAAG-GCTTAGGTCCAA  Raphanus raphanistrum subsp. landra
FD983380       <-- TGGCGAGGAAAGAACAGTGCTTGGCTTTGGGGACAAG-GCTTAGGTCCAA  Raphanus raphanistrum subsp. landra
EY919476       <-- TGGCGAGGAAAGAACAGTGCTTGGCGTTGGGGACAAG-GCTTAGGTCCAA  Raphanus raphanistrum subsp. landra
FD552368       <-- TGGCGAGGAAAGAACAGTGCTTGGCTTTGGGGACAAG-GCTTAGGTCCAA  Raphanus raphanistrum subsp. landra
EY920699       <-- TGGCGAGGAAAGAACAGTGCTTGGCGTTGGGGACAAG-GCTTAGGTCCAA  Raphanus raphanistrum subsp. landra
FD936280       <-- .......GAAAGAACAGTGCTTGGCGTTGGGGACAAG-GCTTAGGTCCAA  Raphanus sativus var. oleiformis
FD963141       --> TGGCGAGGAAAGAACAGTGTTTGGCTTTGGGGACAAGAGCTTAGGTCCAA  Raphanus raphanistrum subsp. maritimus
FD555987       --> TGGCGAGGAAAGAACAGTGCTTGGCTTTGGGGACAAG-GCTTAGGTCCAA  Raphanus raphanistrum subsp. landra
EV570487       --> TGGCGAGGAAAGAACAGTGCTTGGCTTTGGGGACAAG-GCTTAGGTCCAA  Raphanus raphanistrum subsp. landra
EY923717       --> TGGCGAGGAAAGAACAGTGCTTGGCGTTGGGGACAAG-GCTTAGGTCCAA  Raphanus raphanistrum subsp. landra
EY925162       --> TGGCGAGGAAAGAACAGTGCTTGGCGTTGGGGACAAG-GCTTAGGTCCAA  Raphanus raphanistrum subsp. landra
FD963528       --> TGGCGAGGAAAGAACAGTGTTTGGCTTTGGGGACAAG-GCTTAGGTCCAA  Raphanus raphanistrum subsp. maritimus
EX887990       --> TGGCGAGGAAAGAACAGTGCTTGGCGTTGGGGACAAG-ACTTAGGTCCAA  Raphanus sativus var. oleiformis

               501    -    551
UN16303        --> GTACAAGATTAACTACCAGTTTT-ACAGGGTGTTCCCTAATGGTGAGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959530       <-- GTACAAGATTAACTACCAGTTTT-ACAGGGTGTTCCCGAATGGTGAGGTT
EV574759       <-- GTACGAGATTAACTACCAGTTTT-ACAGGGTGTTCCCTAATGGTGAGGTT
FD983380       <-- GTACAAGATTAACTACCAGTTTT-ACAGGGTGTTCCCTAATGGTGAGGTT
EY919476       <-- GTACAAGATTAACTACCAGTTTT-ACAGGGTGTTCCCTAATGGTGAGGTT
FD552368       <-- GTACAAGATTAACTACCAGTTTT-ACAGGGTGTTCCCTAATGGTGAGGTT
EY920699       <-- GTACAAGATTAACTACCAGTTTT-ACAGGGTGTTCCCTAATGGTGAGGTT
FD936280       <-- GTACAAGATTAACTACCAGTTTT-ACAGGGTGTTCCCTAATGGTGAGGTT
FD963141       --> GTACAAGATTAACTACCAGTTTTTACAGGGTGTTCCCGAATGGTGAGGTT
FD555987       --> GTACAAGATTAACTACCAGTTTT-ACAGGGTGTTCCCTAATGGTGAGGTT
EV570487       --> GTACGAGATTAACTACCAGTTTT-ACAGGGTGTTCCCTAATGGTGAGGTT
EY923717       --> GTACAAGATTAACTACCAGTTTT-ACAGGGTGTTCCCTAATGGTGAGGTT
EY925162       --> GTACAAGATTAACTACCAGTTTT-ACAGGGTGTTCCCTAATGGTGAGGTT
FD963528       --> GTACAAGATTAACTACCAGTTTT-ACAGGGTGTTCCCGAATGGTGAGGTT
EX887990       --> GTACAAGATTAACTACCAGTTTT-ACAGGGTGTTCCCTAATGGTGAGGTT

               551    -    601
UN16303        --> CAGTATCTTCATCCTAAAGATGGAGTTTACCCGGAGAAGGCGAATCCGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959530       <-- CAGTATCTTCATCCTAAAGATGGAGTTTACCCGGAGAAGGCGAATCCGGG
EV574759       <-- CAGTATCTTCATCCTAAAGATGGAGTTTACCCGGAGAAGGCGAATCCGGG
FD983380       <-- CAGTATCTTCATCCTAAAGATGGAGTTTACCCGGAGAAGGCGAATCCGGG
EY919476       <-- CAGTATCTTCATCCTAAAGATGGAGTTTACCCGGAGAAGGCGAATCCGGG
FD552368       <-- CAGTATCTTCATCCTAAAGATGGAGTTTACCCGGAGAAGGCGAATCCGGG
EY920699       <-- CAGTATCTTCATCCTAAAGATGGAGTTTACCCGGAGAAGGCGAATCCGGG
FD936280       <-- CAGTATTTTCATCCTAAAGATGGAGTTTATCCGGAGAAGGGGAATCCGGG
FD963141       --> CAGTATCTTCATCCTAAAGATGGAGTTTACCCGGAGAAGGCGAATCCGGG
FD555987       --> CAGTATCTTCATCCTAAAGATGGAGTTTACCCGGAGAAGGCGAATCCGGG
EV570487       --> CAGTATCTTCATCCTAAAGATGGAGTTTACCCGGAGAAGGCGAATCCGGG
EY923717       --> CAGTATCTTCATCCTAAAGATGGAGTTTACCCGGAGAAGGCGAATCCGGG
EY925162       --> CAGTATCTTCATCCTAAAGATGGAGTTTACCCGGAGAAGGCGAATCCGGG
FD963528       --> CAGTATCTTCATCCTAAAGATGGAGTTTACCCGGAGAAGGCGAATCCGGG
EX887990       --> CAGTATCTTCATCCTAAAGATGGAGTTTATCCGGAGAAGGCGAATCCGGG

               601    -    651
UN16303        --> AAGAGAAGGTGTTGGTCAGAATATGAGATCTATTGGGAAAAATGTTAGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959530       <-- AAGAGAAGGTGTTGGTCAGAATATGAGATCTATTGGGAAAAATGTTAGTC
EV574759       <-- AAGAGAAGGTGTTGGTCAGAATATGAGATCTATTGGGAAAAATGTCAGTC
FD983380       <-- AAGAGAAGGTGTTGGTCAGAATATGAGATCTATTGGGAAAAATGTCAGTC
EY919476       <-- AAGAGAAGGTGTTGGTCAGAATATGAGATCTATTGGGAAAAATGTTAGTC
FD552368       <-- AAGAGAAGGTGTTGGTCAGAATATGAGATCTATTGGGAAAAATGTCAGTC
EY920699       <-- AAGAGAAGGTGTTGGTCAGAATATGAGATTTATTGGGAAAAATGTTAGTC
FD936280       <-- AAGAGAAGGTGTTGGTCAGAATATGAGATTTATTGGGAAAAATGTTAGTC
FD963141       --> AAGAGAAGGTGTTGGTCAGAATATGAGATCTATTGGGAAAAATGTTAGTC
FD555987       --> AAGAGAAGGTGTTGGTCAGAATATGAGATCTATTGGGAAAAATGTCAGTC
EV570487       --> AAGAGAAGGTGTTGGTCAGAATATGAGATCTA..................
EY923717       --> AAGAGAAGGTGTTGGTCAGAATATGAGATCTATTGGGAAAAATGTTAGTC
EY925162       --> AAGAGAAGGTGTTGGTCAGAATATGAGATCTATTGGGAAAAATGTTAGTC
FD963528       --> AAGAGAAGGTGTTGGTCAGAATATGAGATCTATTGGGAAAAA........
EX887990       --> AAGAGAAGGTGTTGGTCAGAATATGAGATCTATTGGGAAAAATGTTAGTC

               651    -    701
UN16303        --> CCATTGAAGTTAAGTTTACTGGGAAACAAAGTTATGATTTGTAAGTTG-T
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959530       <-- CCATTGAAGTTAAGTTTACTGGGAAACAAAGTTATGATTTGTAAGTTG-T
EV574759       <-- CCATTGAAGTTAAGTTTACTGGGAAACAAAGTTATGATTTGTAAGTTG-T
FD983380       <-- CCATTGAAGTTAAGTTTACTGGGAAACAAAGTTATGATTTGTAAGTTG-T
EY919476       <-- CCATTGAAGTTAAGTTTACTGGGAAACAAAGTTATGATTTGTAAGTTG-T
FD552368       <-- CCATTGAAGTTAAGTTTACTGGGAAACAAAGTTATGATTTGTAAGTTG-T
EY920699       <-- CCATTGAAGTTAAGTTTACTGGGAAACAAAGTTATGATTTGTAAGTTG-T
FD936280       <-- CCATTGAAGTTAAGTTTACTGGGAAACAAAGTTATGATTTGTAAGTTGGT
FD963141       --> CCATTGAAGTTAAGTTTACTGGGAAACAAAGTTATGATTTGTAAGTTG-T
FD555987       --> CCATTGAAGTTAAGTTTACTGGGAAACAAAGTTATGATTTGTAAGTTG-T
EV570487       --> ..................................................
EY923717       --> CCATTGAAGTTAAGTTTACTGGGAAACAAAGTTATGATTTGTAAGTTG-T
EY925162       --> TCATTGAAGTTAAGTTTACTGGGAAACAAAGTTATGATTTGTAAGTTG-T
FD963528       --> ..................................................
EX887990       --> CCATTGAAGTTAAGTTTACTGGGAAACAAAGTTATGATTTGTAAGTTGGT

               701    -    751
UN16303        --> G-AAAATTTAAAATGTGATAAAAA-AAAACAAAAAATCATGTGGATGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959530       <-- G-AAAATTTAAAAcaaaaaataatgtggatgt..................  Raphanus raphanistrum subsp. maritimus
EV574759       <-- G-AAAACTTAAAATGTGA-AAATT-AAAACAAAAAATCATGTGGATGTGA  Raphanus raphanistrum subsp. landra
FD983380       <-- G-AAAACTTAAAATGTGA-AAATT-AAAACAAAAAATCATGTGG......  Raphanus raphanistrum subsp. landra
EY919476       <-- GGAAAATTTAAAATGTGATAAAAACAAAACAAAAA-TCATGTGGAGATGA  Raphanus raphanistrum subsp. landra
FD552368       <-- G-AAAACTTAAAATGTGA-AAATT-AAAACAAAAAATCATGTGGATGTGA  Raphanus raphanistrum subsp. landra
EY920699       <-- GGAAAATTTAAAATGTGATAAAAACAAAACAAAAA-TCATGTGGAGATGA  Raphanus raphanistrum subsp. landra
FD936280       <-- G-AAAACTTAAACTGTGATAAAAA-AAAACAAAAAATCATGTGGATGTGA  Raphanus sativus var. oleiformis
FD963141       --> G-AAAATTTAAAcaaa..................................  Raphanus raphanistrum subsp. maritimus
FD555987       --> G-A...............................................  Raphanus raphanistrum subsp. landra
EV570487       --> ..................................................  Raphanus raphanistrum subsp. landra
EY923717       --> GGAAAATTTAAAATGTGATAAAAACAAAACAAAAA...............  Raphanus raphanistrum subsp. landra
EY925162       --> GGAAAATTTAAAATGTGATA..............................  Raphanus raphanistrum subsp. landra
FD963528       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX887990       --> G-AAAACTTAAACTGTGATAAAAA-AAAACAAAAAATCATGTGGGTGTGA  Raphanus sativus var. oleiformis

               751    -    801
UN16303        --> CTATGTTTGGTTTTAATTTTTAATGGGGTTCCATTTGAATAATTATTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959530       <-- ..................................................
EV574759       <-- TTATGTTTGGTTTTAATTTTTAATGGGGTTCatcc...............
FD983380       <-- ..................................................
EY919476       <-- CTATGTTTGATGTTAATTTTTAATGGGGTTCCATTTGAATAATTATTCTC
FD552368       <-- CTATGTTTGGTTTTAATTTTTAATGGGGTTCatctgc.............
EY920699       <-- CTATGTTTGATGTTAATTTTTAATGGGGTTCCATTTGAATAATTATTCTC
FD936280       <-- CTATGTTTGGTTTTAATTTTTAATGGGGTTC-ATTTGAATAATTATTCTC
FD963141       --> ..................................................
FD555987       --> ..................................................
EV570487       --> ..................................................
EY923717       --> ..................................................
EY925162       --> ..................................................
FD963528       --> ..................................................
EX887990       --> CT--GTTTGGTTTTAATTTTTAATGGGGTTCatctgaa............

               801    -    851
UN16303        --> GTATTATATTTTGTTGTTGTTGTTATATGAATTTTGTTGTGGTCATTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959530       <-- ..................................................
EV574759       <-- ..................................................
FD983380       <-- ..................................................
EY919476       <-- GTATT.............................................
FD552368       <-- ..................................................
EY920699       <-- GTATT.............................................
FD936280       <-- TTATTATATTTTGTTGTTGTTGTTATATGAATTTTGTTGTGGTCATTTTC
FD963141       --> ..................................................
FD555987       --> ..................................................
EV570487       --> ..................................................
EY923717       --> ..................................................
EY925162       --> ..................................................
FD963528       --> ..................................................
EX887990       --> ..................................................

               851    -    901
UN16303        --> AGTCAGTTAATTT
                   ~~~~~~~~~~~~~
FD959530       <-- .............
EV574759       <-- .............
FD983380       <-- .............
EY919476       <-- .............
FD552368       <-- .............
EY920699       <-- .............
FD936280       <-- AGTCAGTTAATTT
FD963141       --> .............
FD555987       --> .............
EV570487       --> .............
EY923717       --> .............
EY925162       --> .............
FD963528       --> .............
EX887990       --> .............