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Alignment for radish unigene UN16328

               1      -     51
UN16328        --> GGGTTTCAGTTTCTGTGTGAAAACAAAATATTGACAGGAGGAGCTTAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898866       <-- ..................................................
EV571692       <-- ..................................................
FD983927       <-- ..................................................
EY918162       <-- ..................................................
FD987973       --> GGGTTTCAGTTTCTGTGTGAAAACAAAATATTGACAGGAGGAGCTTAAAG
EY899542       --> ..................................CAGGAGGAGCTTAAAG
FD963515       --> ..................................CAGGAGGAGCTTAAAG
EY922144       --> ..................................................
EX894552       --> ..................................................
FD939092       --> ..................................................
EV566595       --> ..................................................

               51     -    101
UN16328        --> AACCAAAGCCGTCTACTTTGGTTGCTCTCTCACTTTTTTTTTCACTTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898866       <-- ....................................TTTTTTCACTTCAT
EV571692       <-- ..................................................
FD983927       <-- ..................................................
EY918162       <-- ..................................................
FD987973       --> AACCAAAGCCGTCTACTTTGGTTGCTCTCTCACTTTTTTTTTCACTTCAT
EY899542       --> AACCAAAGCCGTCTACTTTGGTTGCTCTCTCACTTTTTTTT-CACTTCAT
FD963515       --> AACCAAAGCCGTCTACTTTGGTTGCTCTCTCACTTTTTTTTTCACTTCAT
EY922144       --> .................................TTTTTTTTTCACTTCAT
EX894552       --> ...................................TTTTTTTCACTTCAT
FD939092       --> ...................................TTTTTTTCACTTCAT
EV566595       --> ..................................................

               101    -    151
UN16328        --> CAGTCTGAGACATGCCTAAATCAAAGAGAGACAGACCAGTTACTTTATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898866       <-- CAGTCTGAGACATGC-TAAATCAAAGCGAGACAGACCAGTTACTTTATCA  Raphanus sativus cv Early Scarlet Globe
EV571692       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD983927       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY918162       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD987973       --> CAGTCTGAGACATGCCTAAATCAAAGAGAGACAGACCAGTTACTTTATCA  Raphanus raphanistrum subsp. landra
EY899542       --> CAGTCTGAGACATGCCTAAATCAAAGAGAGACAGACCAGTTACTTTATCA  Raphanus raphanistrum subsp. maritimus
FD963515       --> CAGTCTGAGACATCCCTAAATCAAAGAGAGACAGACCAGTTACTTTATCA  Raphanus raphanistrum subsp. maritimus
EY922144       --> CAGTCTGAGACATGCCTAAATCAAAGAGAGACAGACCAGTTACTTTATCA  Raphanus raphanistrum subsp. landra
EX894552       --> CAGTCTGAGACATGCCTAAATCAAAGCGAGACAGACCAGTTACTTTATCA  Raphanus sativus cv Early Scarlet Globe
FD939092       --> CAGTCTGAGACATGCCTAAATCAAAGCGAGACAGACCAGTTACTTTATCA  Raphanus sativus var. oleiformis
EV566595       --> ..................................................  Raphanus raphanistrum subsp. landra

               151    -    201
UN16328        --> AAGACAAAGAAGAAAGGAAGAGAGCACAAGGAGGGTATTGTAAATGGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898866       <-- AAGACAAAGAAGAAAGGAAGAGAGCACAAGGAGGGTATTGTAAATGGAAT
EV571692       <-- .gGACAAAGAAGAAAGGAAGAGAGCACAAGGAGGGTATTGTAAATGGAAT
FD983927       <-- ....................AGAGCACAAGGAGGGTAT-GTAAGTGGA-T
EY918162       <-- ..................................................
FD987973       --> AAGACAAAGAAGAAAGGAAGAGAGCACAAGGAGGGTATTGTAAGTGGAAT
EY899542       --> AAGACAAAGAAGAAAGGAAGAGAGCACAAGGAGGGTATTGTAAATGGAAT
FD963515       --> AAGACAAAGAAGAAAGGAAGAGAGCACAAGGAGGGTATTGTAAATGGAAT
EY922144       --> AAGACAAAGAAGAAAGGAAGAGAGCACAAGGAGGGTATTGTAAATGGAAT
EX894552       --> AAGACAAAGAAGAAAGGAAGAGAGCACAAGGAGGGTATTGTAAATGGAAT
FD939092       --> AAGACAAAGAAGAAAGGAAGAGAGCACAAGGAGACTATTGTGAATGGAAT
EV566595       --> .gGACAAAGAAGAAAGGAAGAGAGCACAAGGAGGGTATTGTAAATGGAAT

               201    -    251
UN16328        --> CAGAGAGGCTGTTGAGAAATATAATTCTGTCTACGTTTTCTCTTTTGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898866       <-- CAGAGAGGCTGTTGAGAAATATAATTCTGTCTACGTTTTCTCTTTTGAGA
EV571692       <-- CAGAGAGGCTGTTGAGAAATATAATTCTGTCTACGTTTTCTCTTTTGAGA
FD983927       <-- CAGAGAGGCTGTTGAGAAATATAATTCTGTCTACGTTTTCTCTTTTGAGA
EY918162       <-- ..................................................
FD987973       --> CAGAGAGGCTGTTGAGAAATATAATTCTGTCTACGTTTTCTCTTTTGAGA
EY899542       --> CAGAGAGGCTGTTGAGAAATATAATTCTGTCTACGTTTTCTCTTTTGAGA
FD963515       --> CAGAGAGGCTGTTGAGAAATATAATTCTGTCTACGTTTTCTCTTTTGAGA
EY922144       --> CAGAGAGGCTGTTGAGAAATATAATTCTGTCTACGTTTTCTCTTTTGAGA
EX894552       --> CAGAGAGGCTGTTGAGAAATATAATTCTGTCTACGTTTTCTCTTTTGAGA
FD939092       --> CAGAGAGGCTGTTGAAAAATATAATTCTGTCTACGTTTTCTCTTTTGAGA
EV566595       --> CAGAGAGGCTGTTGAGAAATATAATTCTGTCTACGTTTTCTCTTTTGAGA

               251    -    301
UN16328        --> ACATGAGAAACATCAAGTTCAAGGAGTTTAGACAGAAGTTTAGACACAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898866       <-- ACATGAGAAACATCAAGTTCAAGGAGTTTAGACAGCAGTTTAGACACAAT
EV571692       <-- ACATGAGAAACATCAAGTTCAAGGAGTTTAGACAGAAGTTTAGACACAAT
FD983927       <-- ACATGAGAAACATCAAGTTCAAGGAGTTTAGACAGAAGTTTAGACACAAT
EY918162       <-- ..................TCAAGGAGTTTAGACAGAAGTTTAGACACAAT
FD987973       --> ACATGAGAAACATCAAGTTCAAGGAGTTTAGACAGAAGTTTAGACACAAT
EY899542       --> ACATGAGAAACATCAAGTTCAAGGAGTTTAGACAGAAGTTTAGACACAAT
FD963515       --> ACATGAGAAACATCAAGTTCAAGGAGTTTAGACAGAAGTTTAGACACAAT
EY922144       --> ACATGAGAAACATCAAGTTCAAGGAGTTTAGACAGAAGTTTAGACACAAT
EX894552       --> ACATGAGAAACATCAAGTTCAAGGAGTTTAGACAGCAGTTTAGACACAAT
FD939092       --> ACATGAGAAACATCAAGTTCAAGGAGTTTAGACAGCAGTTTAGACACAAT
EV566595       --> ACATGAGAAACATCAAGTTCAAGGAGTTTAGACAGAAGTTTAGACACAAT

               301    -    351
UN16328        --> GGAAAGTTCTTCCTTGGTTCGAACAAAGTGATGCAGGTTGCTCTTGGTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898866       <-- GGAAGGTTCTTCCTGGGTTCGAACAAAGTAATGCAGGTTGCTCTTGGTCG
EV571692       <-- GGAAAGTTCTTCCTTGGTTCGAACAAAGTGATGCAGGTTGCTCTTGGTCG
FD983927       <-- GGAAAGTTCTTCCTTGGTTCGAACAAAGTGATGCAGGTTGCTCTTGGTCG
EY918162       <-- GGAAAGTTCTTCCTTGGTTCGAACAAAGTGATGCAGGTTGCTCTTGGTCG
FD987973       --> GGAAAGTTCTTCCTTGGTTCGAACAAAGTGATGCAGGTTGCTCTTGGTCG
EY899542       --> GGAAAGTTCTTCCTTGGTTCGAACAAAGTGGTGCAGGTTGCTCTTGGTCG
FD963515       --> GGAAAGTTCTTCCTTGGTTCGAACAAAGTGATGCAGGTTGCTCTTGGTCG
EY922144       --> GGAAAGTTCTTCCTTGGTTCGAACAAAGTGATGCAGGTTGCTCTTGGTCG
EX894552       --> GGAAGGTTCTTCCTGGGTTCGAACAAAGTAATGCAGGTTGCTCTTGGTCG
FD939092       --> GGAAAGTTCTTCCTGGGTTCGAACAAAGTGATGCAGGTTGCTCTTGGTCG
EV566595       --> GGAAAGTTCTTCCTTGGTTCGAACAAAGTGATGCAGGTTGCTCTTGGTCG

               351    -    401
UN16328        --> TTCCGCTTCTGATGAATTCCGTCC-TGGCATCTTTAAAGCCTCCAAGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898866       <-- TTCGGCTTCTGATGAAATCTGTCC-TGGCATCTTTAAAGCCTCCAAGATG
EV571692       <-- TTCCGCTTCTGATGAATTCCGTCC-TGGCATCTTTAAAGCCTCCAAGATG
FD983927       <-- CTCCGCTTCTGATGAATTCCGTCC-TGGCATCTTTAAAGCCTCCAAGATG
EY918162       <-- TTCCGCTTCTGATGAATTCCGTCC-TGGCATCTTTAAAGCCTCCAAGATG
FD987973       --> CTCCGCTTCTGATGAATTCCGTCC-TGGCATCTTTAAAGCCTCCAAGATG
EY899542       --> TTCCGCTTCTGATGAATTCCGTCC-TGGCATCTTTAAAGCCTCCAAGGTG
FD963515       --> TTCCGCTTCTGATGAATTCCGTCC-TGGCATCTTTAAAGCCTCCAAGATG
EY922144       --> TTCCGCTTCTGATGAATTCCGTCC-TGGCATCTTTAAAGCCTCCAAGATG
EX894552       --> TTCGGCTTCTGATGAAATCTGTCCCTGGCATCTTTAAAGCCctcccaa..
FD939092       --> TTCGGCTTCTGATGAAATCTGTCC-TGGCATCTTTAAAGCCTCCAAGATG
EV566595       --> TTCCGCTTCTGATGAATTCCGTCC-TGGCATCTTTAAAGCCTCCAAGATG

               401    -    451
UN16328        --> CTTCATGGTGATGCTGGACTTCTTGTAACAGATATGCCAAAGGAAGAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898866       <-- CTTCATGGTGATGCTGGACTTCTTGTAACAGATATGCCAAAAGAAGAGGT
EV571692       <-- CTTCATGGTGATGCTGGACTTCTTGTAACAGATATGCCAAAGGAAGAGGT
FD983927       <-- CTTCATGGTGATACTGGACTTCTTGTAACAGATATGCCAAAGGAAGAGGT
EY918162       <-- CTTCATGGTGATGCTGGACTTCTTGTAACAGATATGCCAAAGGAAGAGGT
FD987973       --> CTTCATGGTGATACTGGACTTCTTGTAACAGATATGCCAAAGGAAGAGGT
EY899542       --> CTTCATGGTGATGCTGGACTTCTTGTAACAGATATGCCAAAGGAAGAGGT
FD963515       --> CTTCATGGTGATGCTGGACTTCTTGTAACAGATATGCCAAAGGAAGAGGT
EY922144       --> CTTCATGGTGATGCTGGACTTCTTGTAACAGATATGCCAAAGGAAGAGGT
EX894552       --> ..................................................
FD939092       --> CTTCATGGTGATGCTGGACTTCTTGTAACAGATATGCCAAAAGAAGAGGT
EV566595       --> CTTCATGGTGATGCTGGACTTCTTGTAACAGATATGCCAAAGGAAGAGGT

               451    -    501
UN16328        --> CGAAAGCTTGTTTAATGCTTATGAGGATTCAGACTTTTCAAGGACTGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898866       <-- CGAAAGCTTGTTTAACGCTTATGAGGATTCAGACTTTTCAAGGACCGGAA
EV571692       <-- CGAAAGCTTGTTTAATGCTTATGAGGATTCAGACTTTTCAAGGACTGGAA
FD983927       <-- CGAAAGCTTGTTTAATGCTTATGAGGATTCA--GTTTTCAAGGACTGGAA
EY918162       <-- CGAAAGCTTGTTTAATGCTTATGAGGATTCAGACTTTTCAAGGACTGGAA
FD987973       --> CGAAAGCTTGTTTAATGCTTATGAGGATTCAG--TTTTCAAGGACTGGAA
EY899542       --> CGAAAGCTTGTTTAATGCTTATGAGGATTCAGACTTTTCAAGGACTGGAA
FD963515       --> CGAAAGCTTGTTTAATGCTTATGAGGATTCAGACTTTTCAAGGACTGGAA
EY922144       --> CGAAAGCTTGTTTAATGCTTATGAGGATTCAGACTTTTCAAGGACTGGAA
EX894552       --> ..................................................
FD939092       --> CGAAGGCTTGTTTAACGCTTATGAGGATTCAGACTTTTCAAGGACCGGAA
EV566595       --> CGAAAGCTTGTTTAATGCTTATGAGGATTCAGACTTTTCAAGGACTGGAA

               501    -    551
UN16328        --> GCACTACAGTTGAAACGGTTGAGCTGAAGGAAGGTCCTCTAGAACAGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898866       <-- GCACTGCAGTAGAAACGGTTGAGCTGAAGGAAGGTCCTCTAGAACAGTTC
EV571692       <-- GCACTACAGTTGAAACGGTTGAGCTGAAGGAAGGTCCTCTAGAACAGTTC
FD983927       <-- GCACTACAGTTGAAACAGTTGAGCTGAAGGAAGGTCCTCTAGAACAGTTC
EY918162       <-- GCACTACAGTTGAAACGGTTGAGCTGAAGGAAGGTCCTCTAGAACAGTTC
FD987973       --> GCACTACAGTTGAAACAGTTGAGCTGAAGGAAGGTCCTCTAGAACAGTTC
EY899542       --> GCACTACAGTTGAAACGGTTGAGCTGA.......................
FD963515       --> GCACTACAGTTGAAACGGTTGAGCTGAAGGAAGGTCCTCTAGAACAGTTC
EY922144       --> GCACTACAGTTGAAACGGTTGAGCTGAAGGAAGGTCCTCTAGAACAGTTC
EX894552       --> ..................................................
FD939092       --> GCACTGCAGTAGAAACGGTTGAGCTGAAGGAAGGTCCTCTAGAACAGTTC
EV566595       --> GCACTACAGTTGAAACGGTTGAGCTGAAGGAAGGTCCTCTAGAACAGTTC

               551    -    601
UN16328        --> ACTCATGAGATGGAACCGTTTCTAAGGAAGCAGGGTATGCCTGTTCGGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898866       <-- ACTCATGAGATGGAACCGTTTCTAAGGAAGCAGGGTATGCCTGTTCGGCT
EV571692       <-- ACTCATGAGATGGAACCGTTTCTAAGGAAGCAGGGTATGCCTGTTCGGCT
FD983927       <-- ACTCATGAGATGGAACCGTTTCTAAGGAAGCAGGGTATGCCTGTTCGGCT
EY918162       <-- ACTCATGAGATGGAACCGTTTCTAAGGAAGCAGGGTATGCCTGTTCGGCT
FD987973       --> ACTCATGAGATGGAACCGTTTCTAAGGAAGCAGGGTATGCCTGTTCGGCT
EY899542       --> ..................................................
FD963515       --> ACTCATGAGATGGAACCGTTTCTAAGGAAGCAGGGTATGCCTGTTCGGCT
EY922144       --> ACTCATGAGATGGAACCGTTTCTAAGGAAGCAGGGTATGCCTGTTCGGCT
EX894552       --> ..................................................
FD939092       --> ACTCATGAGATGGAACCGTTTCTAAGGAAGCAGGGTATGCCTGTTCGGCT
EV566595       --> ACTCATGAGATGGAACCGTTTCTAAGGAAGCAGGGTATGCCTGTTCGGCT

               601    -    651
UN16328        --> CAACAAAGGTACGGTAGAGTTACTCTCGGACTTTGTAGTTTGTGAAGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898866       <-- CAACAAAGGTACGGTAGAGTTACTCTCGGACTTTGTAGTTTGTGAAGAAG
EV571692       <-- CAACAAAGGTACGGTAGAGTTACTCTCGGACTTTGTAGTTTGTGAAGAAG
FD983927       <-- CAACAAAGGTACGGTAGAGTTACTCTCGGACTTTGTAGTTTGTGAAGAAG
EY918162       <-- CAACAAAGGTACGGTAGAGTTACTCTCGGACTTTGTAGTTTGTGAAGAAG
FD987973       --> CAACAAAGGTACGGTAGAGTTACTCTCGGACTTTGTAGTTTGTGAAGAAG
EY899542       --> ..................................................
FD963515       --> CAACAAAGGTACGGTAGAGTTACTCTCGGACTTTGTAGTTTGTGAAGAAG
EY922144       --> CAACAAAGGTACGGTAGAGTTACTCTCGGACTTTGTAGTTTGTGAAGAAG
EX894552       --> ..................................................
FD939092       --> CAACAAAGGTACGGTAGAGTTACTCTCGGACTTTGTAGTTTGTGAAGAAG
EV566595       --> CAACAAAGGTACGGTAGAGTTACTCTCGGACTTTGTAGTTTGTGAAGAAG

               651    -    701
UN16328        --> GCAAACCTCTTTCACCAGAATCTTCTCGCATTTTGCGTCTGTTGGGAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898866       <-- GCAAACCTCTTTCACCAGAATCTTCTCGCATTTTGCGTCTGTTGGGAATA
EV571692       <-- GCAAACCTCTTTCACCAGAATCTTCTCGCATTTTGCGTCTGTTGGGAATA
FD983927       <-- GCAAACCTCTTTCACCAGAATCTTCTCGCATTTTGCGTCTGTTGGGAATA
EY918162       <-- GCAAACCTCTTTCACCAGAATCTTCTCGCATTTTGCGTCTGTTGGGAATA
FD987973       --> -CAAACCTCTTTCACCAGAATCTTCTCGCATTTTGCGTCTGTTGGGAATA
EY899542       --> ..................................................
FD963515       --> GCAAACCTCTTTCACCAGAATCTTCTCGCATTTTGCGACTGTTGGGAATA
EY922144       --> GCAAACCTCTTTCACCAGAATCTTCTCGCATTTTGCGTCTGTTGGGAATA
EX894552       --> ..................................................
FD939092       --> GCAAACCTCTTTCACCAGAATCTTCTCGCATTTTGCGTCTGTTGGGAATA
EV566595       --> GCAAACCTCTTTCACCAGAATCTTCTCGCATTTTGCGTCTGTTGGGAATA

               701    -    751
UN16328        --> AAGTTGGCTACTTTCAAACTCAACTTAGTCTGCAGATGGAGCCCTAATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898866       <-- AAGTTGGCTACTTTCAAACTCAACTTAGTCTGCAGATGGAGCCCTAATGA
EV571692       <-- AAGTTGGCTACTTTCAAACTCAACTTAGTCTGCAGATGGAGCCCTAATGA
FD983927       <-- AAGTTGGCTACTTTCAAACTCAACTTAGTCTGCAGATGGAGCCCTAATGA
EY918162       <-- AAGTTGGCTACTTTCAAACTCAACTTAGTCTGCAGATGGAGCCCTAATGA
FD987973       --> AAGTTGGCTACTTTCAA-CTCAACTTAGTCTGCAGATG............
EY899542       --> ..................................................
FD963515       --> AAGTTGGCTACTTTCAAACTCAACTTAGTCTGCAGATGGAGCCCTAATGA
EY922144       --> AAGTTGGCTACTTTCAAACTCAACTTAGTCTGCAGATGGAGCCCTAATGA
EX894552       --> ..................................................
FD939092       --> AAGTTGGCTACTTTCAAACTCAACTTAGTCTGCAGATGGAGCCCTAATGA
EV566595       --> AAGTTGGCTACTTTCAAACTCAACTTAGTCTGCAGATGGAGCCCTAATGA

               751    -    801
UN16328        --> CTTTGAGCTTTATCGAGAAGGTTTGGATCTCTCGGACGTCGAAACCTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898866       <-- CTTTGAGCTTTACCGAGAAGGTTTGGATCTCTCGGACGTCGAAACCTCTT
EV571692       <-- CTTTGAGCTTTATCGAGAAGGTTTGGATCTCTCGGACGTCGAAACCTCTT
FD983927       <-- CTTTGAGCTTTATCGAGAAGGTTTGGATCTCTCGGACGTCGAAACCTCTT
EY918162       <-- CTTTGAGCTTTATCGAGAAGGTTTGGATCTCTCGGACGTCGAAACCTCTT
FD987973       --> ..................................................
EY899542       --> ..................................................
FD963515       --> CTTTGAGCT.........................................
EY922144       --> CTTTGAGCTTTATCGAGAAG-TTTGGATCTCTCGGACGTCGAAACCTCTT
EX894552       --> ..................................................
FD939092       --> CTTTGAGCT.........................................
EV566595       --> CTTTGAGCTTTATCGAGAAGGTTTGGATCTCTCGGACGTCGAAACCTCTT

               801    -    851
UN16328        --> GAAAA-GGCTCAA-CTTTTTTTTT-ATCGAACTCT--AAAGTTTTCGTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898866       <-- AAAAAAGGCCCAAGCTTTTTTTTTTATCAAACTCTTTAAAGTTTTTGTAT
EV571692       <-- GAAAA-GGCTCAA-CTTTTTTTTT-ATCGAACTCT--AAAGTTTTCGTAT
FD983927       <-- GAAAA-GGCTCAA-CTTTTTTTTT-ATCGAACTCT--AAAGTTTTCGTAT
EY918162       <-- GAAAA-GGCTCAA-CTTTTTTTTT-ATCGAACTCT--AAAGTTTTCGTAT
FD987973       --> ..................................................
EY899542       --> ..................................................
FD963515       --> ..................................................
EY922144       --> GAAAA-G-CTC-A-CTTTTTTTT--ATCGAACTCT--AAAGTTTTCGTAT
EX894552       --> ..................................................
FD939092       --> ..................................................
EV566595       --> GAAAA-GGCTCAA-CTTTTTTTTT-ATCGAACTCT--AAAGTTTTCGTAT

               851    -    901
UN16328        --> CGTATCTATCATTCACTTGGATGATGCTTGCTCTTGTGGTTGTATTTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898866       <-- CGTATCTATCATTCACTTGGATGATGCTTGCTCTTGTGGTTGTATTTGCA
EV571692       <-- CGTATCTATCATTCACTTGGATGATGCTTGCTCTTGTGGTTGTATTTGCA
FD983927       <-- CGTATCTATCATTCACTTGGATGATGCTTGCTCTTGTGGTTGTATTTGCA
EY918162       <-- CGTATCTATCATTCACTTGGATGATGCTTGCTCTTGTGGTTGTATTTGCA
FD987973       --> ..................................................
EY899542       --> ..................................................
FD963515       --> ..................................................
EY922144       --> CGTATCTATCAT......................................
EX894552       --> ..................................................
FD939092       --> ..................................................
EV566595       --> CGTATCTATCATTCACTTGGATGATGCTTGCTCTTGTGGTTGTATTTGCA

               901    -    951
UN16328        --> GTTTTATGTCAAAGTTTTGTTGCTTTAGTGTTTGTAGAATACCAGATTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898866       <-- GTTTTATGTCAAAGTTTTGTTGCTTTAGTGTTTGTAc.............
EV571692       <-- GTTTTATGTCAAAGTTTTGTTGCTTTAGTGTTTGTAGAATACCAGATTAT
FD983927       <-- GTTTTATGTCAAAGTTTTGTTGCTTTAGTGTTTGTAGAATACCAGATTAT
EY918162       <-- GTTTTATGTCAAAGTTTTGTTGCTTTAGTGTTTGTAGAATACCAGATTAT
FD987973       --> ..................................................
EY899542       --> ..................................................
FD963515       --> ..................................................
EY922144       --> ..................................................
EX894552       --> ..................................................
FD939092       --> ..................................................
EV566595       --> GTTTTATGTCAAAGTTTTGTTGCTTTAGTGTTTGTAGAATACCAGATTAT

               951    -   1001
UN16328        --> CTTCTTGAGTTCCCTTCTGCTAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~
EX898866       <-- ........................
EV571692       <-- CTTCTTGAGTTCCCTTCTGCTAGc
FD983927       <-- CTTCTTGAGTTCCCTTCTGCTAGT
EY918162       <-- CTTCTTGAGTT.............
FD987973       --> ........................
EY899542       --> ........................
FD963515       --> ........................
EY922144       --> ........................
EX894552       --> ........................
FD939092       --> ........................
EV566595       --> CTTCTTGAGTTCCCTTCTGC....