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Alignment for radish unigene UN16344

               1      -     51
UN16344        --> TTTTTATAGTATCGGGTTATTTTTTTGGTTGTTTCATCAGCGCCGCCGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY430534       <-- ..................................................
FD532257       --> TTTTTATAGTATCGGGTTATTTTTTTGGTTGTTTCATCAGCGCCGCCGAG
FD963224       --> TTTTTATAGTATCGGGTTATTTTTTTGGTTGTTTCATCAGCGCCGCCGAG
EV528590       --> ..........................GGTTGTTTCATCAGCGCCGCCGAG
FD980529       --> ..........................................catcagcg
FY442771       --> ..................................................
FD564008       --> .............................................ggagc
FY441476       --> ..................................................
EY945969       --> ..................................................
EY914881       --> ..................................................
FY440153       --> ..................................................

               51     -    101
UN16344        --> AGAAGAGAGCCTTAGAGCTAAGAAGCTATGACGACGATTGTTCCCACTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY430534       <-- ..................................................
FD532257       --> AGAAGAGAGCCTTAGAGCTAAGAAGCTATGACGACGATTGTTCCCACTTC
FD963224       --> AGAAGAGAGCCTTAGAGCTAAGAAGCTATGACGACGATTGTTCCCACTTC
EV528590       --> AGAAGAGAGCCTTAGAGCTAAGAAGCTATGACGACGATTGTTCCCACTTC
FD980529       --> ccgccgagagaagAGAGCTTAG-AGCTATGACGACGATTGTTCCCACTTC
FY442771       --> ............gAGAGCTTAG-AGCTATGACGACGATTGTTCCCACTTC
FD564008       --> gccgccgagagaagagagcttatAGCTATGACGACGATTGTTCCCACTTC
FY441476       --> ...............................CGACGATTGTTCCCACTTC
EY945969       --> ...............................................TTC
EY914881       --> ..................................................
FY440153       --> ..................................................

               101    -    151
UN16344        --> CGAAGAAGATCCGTTCCTCGCCGTTGTCCAGTTTACTTCCCAGCTCGCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY430534       <-- ..................................................
FD532257       --> CGAAGAAGATCCGTTCCTCGCCGTTGTCCAGTTTACTTCCCAGCTCGCCT
FD963224       --> CGAAGAAGATCCGTTCCTCGCCGTTGTCCAGTTTACTTCCCAGCTCGCCT
EV528590       --> CGAAGAAGATCCGTTCCTCGCCGTTGTCCAGTTTACTTCCCAGCTCGCCT
FD980529       --> CGAAGAAGATCCGTTCCTCGCCGTTGTCCAGTTTACTTCCCAGCTCGCCT
FY442771       --> CGAAGAAGATCCGTTCCTCGCCGTTGTCCAGTTTACTTCCCAGCTCGCCT
FD564008       --> CGAAGAAGATCCGTTCCTCGCCGTTGTCCAGTTTACTTCCCAGCTCGCGT
FY441476       --> CGAAGAAGATCCGTTCCTCGCCGTTGTCCAGTTTACTTCCCAGCTCGCCT
EY945969       --> CGAAGAAGATCCGTTCCTCGCCGTTGTCCAGTTTACTTCCCAGCTCGCCT
EY914881       --> ........................gGTCCAGTTTACTTCCCAGCTCGCCT
FY440153       --> ..................................................

               151    -    201
UN16344        --> GGGCTGATGCTGGTCCCGAGGCTGCAGAGCCAGAGATCACCAGGCTGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY430534       <-- ..................................................
FD532257       --> GGGCTGATGCTGGTCCCGAGGCTGCAGAGCCAGAGATCACCAGGCTGTGT
FD963224       --> GGGCTGATGCTGGTCCCGAGGCTGCAGAGCCAGAGATCACCAGGCTGTGT
EV528590       --> GGGCTGATGCTGGTCCCGAGGCTGCAGAGCCAGAGATCACCAGGCTGTGT
FD980529       --> GGGCTGATGCTGGTCCCGAGGCTGCAGAGCCAGAGATCACCAGGCTGCGT
FY442771       --> GGGCTGATGCTGGTCCCGAGGCTGCAGAGCCAGAGATCACCAGGCTGTGT
FD564008       --> GGGCTGATGCTGGTCCCGAGGCTGCATAGCCA..................
FY441476       --> GGGCTGATGCTGGTCCCGAGGCTGCAGAGCCAGAGATCACCAGGCTGTGT
EY945969       --> GGGCTGATGCTGGTCCCGAGGCTGCAGAGCCAGAGATCACCAGGCTGTGT
EY914881       --> GGGCTGATGCTGGTCCCGAGGCTGCAGAGCCAGAGATCACCAGGCTGTGT
FY440153       --> ..................................................

               201    -    251
UN16344        --> AGAGAAGCTGAGGAATCTATAGTAGCAGGAAAGTGGTTGGAGTTGGCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY430534       <-- ..................................................  Raphanus sativus cv GSK3-1
FD532257       --> AGGGAGGCTGAGGAGTCCATTGTAGCAGGAAAGTGGTTGGAGTTGGCTTC  Raphanus raphanistrum subsp. maritimus
FD963224       --> AGGGAGGCTGAGGAGTCTATTGTAGCAGGAAAGTGGTTGGAGTTGGCTTC  Raphanus raphanistrum subsp. maritimus
EV528590       --> AGGGAGGCTGAGGAGTCTATTGTAGCAGGAAAGTGGTTGGAGTTGGCTTC  Raphanus raphanistrum subsp. maritimus
FD980529       --> AGAGAAGCTGAGGAATCTATAGTAGCAGGAAAGTGGTTGGAGTTGGCTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY442771       --> AGAGAAGCTGAGGAATCTATAGTAGCAGGAAAGTGGTTGGAGTTGGCTTC  Raphanus sativus cv GSK3-1
FD564008       --> ..................................................  Raphanus sativus var. oleiformis
FY441476       --> AGAGAAGCTGAGGAATCTATAGTAGCAGGAAAGTGGTTGGAGTTGGCTTC  Raphanus sativus cv GSK3-1
EY945969       --> AGAGAAGCTGAGGAATCTATAGTAGCAGGAAAGTGGTTGGAGTTGGCTTC  Raphanus sativus cv Rat-Tail Radish #3870
EY914881       --> AGAGAAGCTGAGGAATCTATAGTAGCAGGAAAGTGGTTGGAGTTGGCTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY440153       --> ..................................................  Raphanus sativus cv GSK3-1

               251    -    301
UN16344        --> TTTAATGGTTACTTCTGCTGAATTGGTATCTTCCAAGATGTCTGACAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY430534       <-- ..................................................  Raphanus sativus cv GSK3-1
FD532257       --> TTTAATGGTTACTTCTGCTGAATTGGTTTCTTCCAAGATGTCTGACAAAG  Raphanus raphanistrum subsp. maritimus
FD963224       --> TTTAATGGTTACTTCTGCTGAATTGGTTTCTTCCAAGATGTCTGACAAAG  Raphanus raphanistrum subsp. maritimus
EV528590       --> TTTAATGGTTACTTCTGCTGAATTGGTTTCTTCCAAGATGTCTGACAAAG  Raphanus raphanistrum subsp. maritimus
FD980529       --> TTTAATGGTTACTTCTGCTGAATTGGTATCTTCCAAGATGTCTGACAAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY442771       --> TTTAATGGTTACTTCTGCTGAATTGGTATCTTCCAAGATGTCTGACAAAG  Raphanus sativus cv GSK3-1
FD564008       --> ..................................................  Raphanus sativus var. oleiformis
FY441476       --> TTTAATGGTTACTTCTGCTGAATTGGTATCTTCCAAGATGTCTGACAAAG  Raphanus sativus cv GSK3-1
EY945969       --> TTTAATGGTTACTTCTGCTGAATTGGTATCTTCCAAGATGTCTGACAAAG  Raphanus sativus cv Rat-Tail Radish #3870
EY914881       --> TTTAATGGTTACTTCTGCTGAATTGGTATCTTCCAGGATGTCTGACAAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY440153       --> ..................................................  Raphanus sativus cv GSK3-1

               301    -    351
UN16344        --> ATCTTGAGTGTACCTACACCATCATTTGCAGCCTTGTTAAGAACGCGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY430534       <-- ..................................................  Raphanus sativus cv GSK3-1
FD532257       --> ATCTTGAGTGTACCTACACCATCATTTGCAGCCTTGTCAAGAATGCCAAT  Raphanus raphanistrum subsp. maritimus
FD963224       --> ATCTTGAGTGTACCTACACCATCATTTGCAGCCTTGTCAAGAATGCCAAT  Raphanus raphanistrum subsp. maritimus
EV528590       --> ATCTTGAGTGTACCTACACCATCATTTGCAGCCTTGTCAAGAATGCCAAT  Raphanus raphanistrum subsp. maritimus
FD980529       --> ATCTTGAGTGTACCTACACCATCATTTGCAGCCTTGTTAAGAACGCGAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FY442771       --> ATCTTGAGTGTACCTACACCATCATTTGCAGCCTTGTTAAGAACGCGAAT  Raphanus sativus cv GSK3-1
FD564008       --> ..................................................  Raphanus sativus var. oleiformis
FY441476       --> ATCTTGAGTGTACCTACACCATCATTTGCAGCCTTGTTAAGAACGCGAAT  Raphanus sativus cv GSK3-1
EY945969       --> ATCTTGAGTGTACCTACACCATCATTTGCAGCCTTGTTAAGAACGCGAAT  Raphanus sativus cv Rat-Tail Radish #3870
EY914881       --> ATCTTGAGTGTACCTACACCATCATTTGCAGCCTTGTTAAGAACGCGAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FY440153       --> ..................................................  Raphanus sativus cv GSK3-1

               351    -    401
UN16344        --> AGCGCTGATGATGTTCTTGAAATGGTGAAAGCTATCTCTTCTAAGGTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY430534       <-- ..................................................  Raphanus sativus cv GSK3-1
FD532257       --> AGCCCTGATGATGTCCTTGAAATGGTGAAAGTTATCTCTTCTAAGGTTGT  Raphanus raphanistrum subsp. maritimus
FD963224       --> AGCCCTGATGATGTCCTTGAAATGGTGAAAGTTATCTCTTCTAAGGTTGT  Raphanus raphanistrum subsp. maritimus
EV528590       --> AGCCCTGATGATGTCCTTGAAATGGTGAAAGTTATCTCTTCTAAGGTTGT  Raphanus raphanistrum subsp. maritimus
FD980529       --> AGCGCTGATGATGTTCTTGAAATGGTGAAAGCTATCTCTTCTAAGGTTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FY442771       --> AGCGCTGATGATGTTCTTGAAATGGTGAAAGCTATCTCTTCTAAGGTTGT  Raphanus sativus cv GSK3-1
FD564008       --> ..................................................  Raphanus sativus var. oleiformis
FY441476       --> AGCGCTGATGATGTTCTTGAAATGGTGAAAGCTATCTCTTCTAAGGTTGT  Raphanus sativus cv GSK3-1
EY945969       --> AGCGCTGATGATGTTCTTGAAATGGTGAAAGCTATCTCTTCTAAGGTTGT  Raphanus sativus cv Rat-Tail Radish #3870
EY914881       --> AGCGCTGATGATGTTCTTGAAATGGTGAAAGCTATCTCTTCTAAGGTTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FY440153       --> ..................................................  Raphanus sativus cv GSK3-1

               401    -    451
UN16344        --> TCAACAGCCCAATGACAAAGCTTCTCTTCGTTTGAAGATCCTCTTCAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY430534       <-- ..................................................
FD532257       --> TCAACAGCCCAATGACAAAGCTTCTCTTCGTTTGAAGATCCTCTTCAATC
FD963224       --> TCAACAGCCCAATGACAAAGCTTCTCTTCGTTTGAAGATCCTCTTCAATC
EV528590       --> TCAACAGCCCAATGACAAAGCTTCTCTTCGTTTGAAGATCCTCTTCAATC
FD980529       --> TCAACAGCCCAATGACAAAGCTTCTCTTCGTTTGAAGATCCTCTTCAATC
FY442771       --> TCAACAGCCCAATGACAAAGCTTCTCTTCGTTTGAAGATCCTCTTCAATC
FD564008       --> ..................................................
FY441476       --> TCAACAGCCCAATGACAAAGCTTCTCTTCGTTTGAAGATCCTCTTCAATC
EY945969       --> TCAACAGCCCAATGACAAAGCTTCTCTTCGTTTGAAGATCCTCTTCAATC
EY914881       --> TCAACAGCCCAATGACAAAGCTTCTCTTCGTTTGAAGATCCTCTTCAATC
FY440153       --> ..................................................

               451    -    501
UN16344        --> TCTATAACCTTCTGGACCACCCGTATGCTCGTTTCCAAGTCTACATGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY430534       <-- ..................................................  Raphanus sativus cv GSK3-1
FD532257       --> TCTATAACCTTCTGGACCACCCCTATGCTCGTTTCCAAGTCTACATGAAA  Raphanus raphanistrum subsp. maritimus
FD963224       --> TCTATAACCTTCTGGACCACCCCTATGCTCGTTTCCAAGTCTACATGAAA  Raphanus raphanistrum subsp. maritimus
EV528590       --> TCTATAACCTTCTGGACCACCCCTATGCTCGTTTCCAAGTCTACATGAAA  Raphanus raphanistrum subsp. maritimus
FD980529       --> TCTATAACCTTCTGGACCACCCGTATGCTCGTTTCCAAGTCTACATGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY442771       --> TCTATAACCTTCTGGACCACCCGTATGCTCGTTTCCAAGTCTACATGAAA  Raphanus sativus cv GSK3-1
FD564008       --> ..................................................  Raphanus sativus var. oleiformis
FY441476       --> TCTATAACCTTCTGGACCACCCGTATGCTCGTTTCCAAGTCTACATGAAA  Raphanus sativus cv GSK3-1
EY945969       --> TCTATAACCTTCTGGACCACCCGTATGCTCGTTTCCAAGTCTACATGAAA  Raphanus sativus cv Rat-Tail Radish #3870
EY914881       --> TCTATAACCTTCTGGACCACCCGTATGCTCGTTTCCAAGTCTACATGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY440153       --> ..................................................  Raphanus sativus cv GSK3-1

               501    -    551
UN16344        --> GCGCTTACGCTGGCTGTTGAAGGGAAGGTTACTGAGTACGTAGTTCCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY430534       <-- ..................................................  Raphanus sativus cv GSK3-1
FD532257       --> GTGCTTACGCTGGCTGTTGAAGGGAAGGTTACTGAGTACGTAGTTCCTTC  Raphanus raphanistrum subsp. maritimus
FD963224       --> GTGCTTACGCTGGCTGTTGAAGGGAAGGTTACTGAGTGTGTAGTTCCTTC  Raphanus raphanistrum subsp. maritimus
EV528590       --> GTGCTTACGCTGGCTGTTGAAGGGAAGGTTACTGAGTACGTAGTTCCTTC  Raphanus raphanistrum subsp. maritimus
FD980529       --> GCGCTTACGCTGGCTGTTGAAGGGAAGGTTACTGAGTACGTAGTTCCTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY442771       --> GCGCTTACGCTGGCTGTTGAAGGGAAGGTTACTGAGTACGTAGTTCCTTC  Raphanus sativus cv GSK3-1
FD564008       --> ..................................................  Raphanus sativus var. oleiformis
FY441476       --> GCGCTTACGCTGGCTGTTGAAGGGAAGGTTACTGAGTACGTAGTTCCTTC  Raphanus sativus cv GSK3-1
EY945969       --> GCGCTTACGCTGGCTGTTGAAGGGAAGGTTACTGAGTACGTAGTTCCTTC  Raphanus sativus cv Rat-Tail Radish #3870
EY914881       --> GCGCTTACGCTGGCTGTTGAAGGGAAGGTTACTGAGTACGTAGTTCCTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY440153       --> ..................................................  Raphanus sativus cv GSK3-1

               551    -    601
UN16344        --> TTTTAAGAAAATTGATAACTTCTTGAAAGAGTGGAACGTTGACACTAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY430534       <-- ..................................................
FD532257       --> TTTTAAGAAAATTGATAACTTCTTGAAAGAGTGGAACGTTGACACTAAAG
FD963224       --> TTTTAAGAAAATTGATAACTTCTTGAAAGAGTGGAACGTTGACACTAAAG
EV528590       --> TTTTAAGAAAATTGATAACTTCTTGAAAGAGTGGAACGTTGACACTAAAG
FD980529       --> TTTTAAGAAAATTGATAACTTCTTGAAAGAGTGGAACGTTGACACTAAAG
FY442771       --> TTTTAAGAAAATTGATAACTTCTTGAAAGAGTGGAACGTTGACACTAAAG
FD564008       --> ..................................................
FY441476       --> TTTTAAGAAAATTGATAACTTCTTGAAAGAGTGGAACGTTGACACTAAAG
EY945969       --> TTTTAAGAAAATTGATAACTTCTTGAAAGAGTGGAACGTTGACACTAAAG
EY914881       --> TTTTAAGAAAATTGATAACTTCTTGAAAGAGTGGAACGTTGACACTAAAG
FY440153       --> ..................................................

               601    -    651
UN16344        --> ATCAGAGGCAACTCTTCCTTGCCATTGCTAATGTTCTGAGAGAGAACAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY430534       <-- ..................................................
FD532257       --> ATCAGAGGCAACTCTTCCTTGCCATTGCTAATGTTCTGAGAGAGAACAAA
FD963224       --> ATCAGAGGCAACTCTTCCTTGCCATTGCTAATGTTCTGAGAGAGAACAAA
EV528590       --> ATCAGAGGCAACTCTTCCTTGCCATTGCTAATGTTCTGAGAGAGAACAAA
FD980529       --> ATCAGAGGCAACTCTTCCTTGCCATTGCTAATGTTCTGAGAGAGAACAAA
FY442771       --> ATCAGAGGCAACTCTTCCTTGCCATTGCTAATGTTCTGAGAGAGAACAAA
FD564008       --> ..................................................
FY441476       --> ATCAGAGGCAACTCTTCCTTGCCATTGCTAATGTTCTGAGAGAGAACAAA
EY945969       --> ATCAGAGGCAACTCTTCCTTGCCATTGCTAATGTTCTGAGAGAGAACAAA
EY914881       --> ATCAGAGGCAACTCTTCCTTGCCATTGCTAATGTTCTGAGAGAGAACAAA
FY440153       --> ..................................................

               651    -    701
UN16344        --> AGCTTGGTGAACGAATCCCTTAAGTTCCTGACGAAGTATCTAGCGACTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY430534       <-- ...................................GTATCTAGCGACTTT
FD532257       --> AGCTTGGTGAACGAATCCCTTAAGTTCCTGACGAAGTATCTAGCTACTTT
FD963224       --> AGCTTGGTGA........................................
EV528590       --> AGCTTGGTGAACGAATCCCTTAAGTTCCTGACGAAGTATCTAGCTACTTT
FD980529       --> AGCTTGGTGAACGAATCCCTTAAGTTCCTGACGAAGTATCTAGCGACTTT
FY442771       --> AGCTTGGTGAACGAATCCCTTAAGTTCCTGACGAAGTATCTAGCGACTTT
FD564008       --> ..................................................
FY441476       --> AGCTTGGTGAACGAATCCCTTAAGTTCCTGACGAAGTATCTAGCGACTTT
EY945969       --> AGCTTGGTGAACGAATCCCTTAAGTCCCTGACGAAGTATCTAGCGACTTT
EY914881       --> AGCTTGGTGAACGAATCCCTTAAGTTCCTGACGAAGTATCTAGCGACTTT
FY440153       --> ..................................................

               701    -    751
UN16344        --> CTCAAGTGAGGATGCTAAGGTCCTAGATGAAGCTAAGGAGGAGGCTGTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY430534       <-- CTCAAGTGAGGATGCTAAGGTCCTAGATGAAGCTAAGGAGGAGGCTGTGC
FD532257       --> CTCAAGTG..........................................
FD963224       --> ..................................................
EV528590       --> CTCAAGTGAGGATGCTAAAGTCCTggag......................
FD980529       --> CT................................................
FY442771       --> CTCAAGTGAGGATGCTAAGGTCCTAGATGAAGCTAAGGAGGAGGCTGTGC
FD564008       --> ..................................................
FY441476       --> CTCAAGTGAGGATGCTAAGGTCCTAGATGAAGCTAAGGAGGAGGCTGTGC
EY945969       --> CTCAAGTGAGGATGCTAAG-TCCTAGAT......................
EY914881       --> CTCAAGTGAGGATGCTAAGGTCCTAGATGAAGCTAAGGAGGAGGCTGTGC
FY440153       --> ..................................................

               751    -    801
UN16344        --> GTGCAGTTATTGAATTTGTCAAGGCTTCCAGCATCTTCCAGTGTGATTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY430534       <-- GTGCAGTTATTGAATTTGTCAAGGCTTCCAGCATCTTCCAGTGTGATTTA
FD532257       --> ..................................................
FD963224       --> ..................................................
EV528590       --> ..................................................
FD980529       --> ..................................................
FY442771       --> GTGCAGTTATTGAATTTGTCAAGGCTTCCAGCATCTTCCAGTGTGATTTA
FD564008       --> ..................................................
FY441476       --> GTGCAGTTATTGAATTTGTCAAGGCTTCCAGCATCTTCCAGTGTGATTTA
EY945969       --> ..................................................
EY914881       --> GTGCAGTTATTGAATTTG................................
FY440153       --> ..................................................

               801    -    851
UN16344        --> TTGGAATTGCCAACCGTAGCACAACTAGAGAAGGATACGAAGTATGCCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY430534       <-- TTGGAATTGCCAACCGTAGCACAACTAGAGAAGGATACGAAGTATGCCCC
FD532257       --> ..................................................
FD963224       --> ..................................................
EV528590       --> ..................................................
FD980529       --> ..................................................
FY442771       --> TTGGAATTGCCAACCGTAGCACAACTAGAGAAGGATACGAAGTATGCCCC
FD564008       --> ..................................................
FY441476       --> TTGGAATTGCCAACCGTAGCACAACTAGAGAAGGATACGAAGTATGCCCC
EY945969       --> ..................................................
EY914881       --> ..................................................
FY440153       --> ..................................................

               851    -    901
UN16344        --> GGTTTACCAGCTACTAAAGATCTTTCTTACTCAGAGGCTTAATGCTTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY430534       <-- GGTTTACCAGCTACTAAAGATCTTTCTTACTCAGAGGCTTAATGCTTACA
FD532257       --> ..................................................
FD963224       --> ..................................................
EV528590       --> ..................................................
FD980529       --> ..................................................
FY442771       --> GGTTTACCAGCTACTAAAGATCTTTCTTACTCAGAGGCTTAATGCTTACA
FD564008       --> ..................................................
FY441476       --> GGTTTACCAGCTACTAAAGATCTTTCTTACTCAGAGGCTTAATGCTTACA
EY945969       --> ..................................................
EY914881       --> ..................................................
FY440153       --> ..................................................

               901    -    951
UN16344        --> CTGAATTCCGAGCTGCAAATTCGGAATGTCTGCAAAGCTATGGACTTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY430534       <-- CTGAATTCCGAGCTGCAAATTCGGAATGTCTGCAAAGCTATGGACTTGTT
FD532257       --> ..................................................
FD963224       --> ..................................................
EV528590       --> ..................................................
FD980529       --> ..................................................
FY442771       --> CTGAATTCCGAGCTGCAAATTCGGAATGTCTG..................
FD564008       --> ..................................................
FY441476       --> CTGAATTCCGAGCTGCAAATTCGGAATGTCTGCAAAGCTATGGACTTGTT
EY945969       --> ..................................................
EY914881       --> ..................................................
FY440153       --> .................AATTCGGAATG-CTGCAA-GCTATGGACTTGTT

               951    -   1001
UN16344        --> GATGACGACTGTGTAACGAAAATGAGATTGTTGTCACTAGTTGACTTAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY430534       <-- GATGACGACTGTGTAACGAAAATGAGATTGTTGTCACTAGTTGACTTAGC
FD532257       --> ..................................................
FD963224       --> ..................................................
EV528590       --> ..................................................
FD980529       --> ..................................................
FY442771       --> ..................................................
FD564008       --> ..................................................
FY441476       --> GATGA.............................................
EY945969       --> ..................................................
EY914881       --> ..................................................
FY440153       --> GATGACGACTGTGTAACGAAAATGAGATTGTTGTCACTAGTTGACTTAGC

               1001   -   1051
UN16344        --> GTCAGATGAGTCTGGCAAAATACCATACGCCTCAATCAAAGACACTCTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY430534       <-- GTCAGATGAGTCTGGCAAAATACCATACGCCTCAATCAAAGACACTCTAC
FD532257       --> ..................................................
FD963224       --> ..................................................
EV528590       --> ..................................................
FD980529       --> ..................................................
FY442771       --> ..................................................
FD564008       --> ..................................................
FY441476       --> ..................................................
EY945969       --> ..................................................
EY914881       --> ..................................................
FY440153       --> GTCAGATGAGTCTGGCAAAATACCATACGCCTCAATCAAAGACACTCTAC

               1051   -   1101
UN16344        --> AGGTAAAGGAAGAAGAGGTTGAACTATGGATCGTGAAGGCAATAACTGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY430534       <-- AGGTAAAGGAAGAAGAGGTTGAACTATGGATCGTGAAGGCAATAACTGCG
FD532257       --> ..................................................
FD963224       --> ..................................................
EV528590       --> ..................................................
FD980529       --> ..................................................
FY442771       --> ..................................................
FD564008       --> ..................................................
FY441476       --> ..................................................
EY945969       --> ..................................................
EY914881       --> ..................................................
FY440153       --> AGGTAAAGGAAGAAGAGGTTGAACTATGGATCGTGAAGGCAATAACTGCG

               1101   -   1151
UN16344        --> AAGCTGATCGATTGTAAGATGGATCAGATGAACCAAGTTGTCATCGTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY430534       <-- AAGCTGATCGATTGTAAGATGGATCAGATGAACCAAGTTGTCATCGTCAG
FD532257       --> ..................................................
FD963224       --> ..................................................
EV528590       --> ..................................................
FD980529       --> ..................................................
FY442771       --> ..................................................
FD564008       --> ..................................................
FY441476       --> ..................................................
EY945969       --> ..................................................
EY914881       --> ..................................................
FY440153       --> AAGCTGATCGATTGTAAGATGGATCAGATGAACCAAGTTGTCATCGTCAG

               1151   -   1201
UN16344        --> CCGCTGTTCCGAGCGTGAATTCGGGTCAAAGCAATGGCAATCACTTCGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY430534       <-- CCGCTGTTCCGAGCGTGAATTCGGGTCAAAGCAATGGCAATCACTTCGAA
FD532257       --> ..................................................
FD963224       --> ..................................................
EV528590       --> ..................................................
FD980529       --> ..................................................
FY442771       --> ..................................................
FD564008       --> ..................................................
FY441476       --> ..................................................
EY945969       --> ..................................................
EY914881       --> ..................................................
FY440153       --> CCGCTGTTCCGAGCGTGAATTCGGGTCAAAGCAATGGCAATCACTTCGAA

               1201   -   1251
UN16344        --> CTAAGCTCGCAACTTGGCGGGAAAACATTGGAAACGTCATAAGTACAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY430534       <-- CTAAGCTCGCAACTTGGCGGGAAAACATTGGAAACGTCATAAGTACAATC
FD532257       --> ..................................................
FD963224       --> ..................................................
EV528590       --> ..................................................
FD980529       --> ..................................................
FY442771       --> ..................................................
FD564008       --> ..................................................
FY441476       --> ..................................................
EY945969       --> ..................................................
EY914881       --> ..................................................
FY440153       --> CTAAGCTCGCAACTTGGCGGGAAAACATTGGAAACGTCATAAGTACAATC

               1251   -   1301
UN16344        --> GAGTCGAACAAGGTAACCGAGGAAGGTTCTCAGGCATCATCAGCATCTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY430534       <-- GAGTCGAACAAGGTAACCGAGGAAGGTTCTCAGGCATCATCAGCATCTGC
FD532257       --> ..................................................
FD963224       --> ..................................................
EV528590       --> ..................................................
FD980529       --> ..................................................
FY442771       --> ..................................................
FD564008       --> ..................................................
FY441476       --> ..................................................
EY945969       --> ..................................................
EY914881       --> ..................................................
FY440153       --> GAGTCGAACAAGGTAACCGAGGAAGGTTCTCAGGCATCATCAGCATCTGC

               1301   -   1351
UN16344        --> TGCAGCAATTCAAGGGTTGACTGTTCGTTGAAAAGCTATCAAGACAGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY430534       <-- TGCAGCAATTCAAGGGTTGACTGTTCGTTGAAAAGCTATCAAGACAGAAA
FD532257       --> ..................................................
FD963224       --> ..................................................
EV528590       --> ..................................................
FD980529       --> ..................................................
FY442771       --> ..................................................
FD564008       --> ..................................................
FY441476       --> ..................................................
EY945969       --> ..................................................
EY914881       --> ..................................................
FY440153       --> TGCAGCAATTCAAGGGTTGACTGTTCGTTGAAAAGCTATCAAGACAGAAA

               1351   -   1401
UN16344        --> GAACTTTTTCATCTCCTGAAAATCTCTCAAAATCTATAACCAACGTTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY430534       <-- GAACTTTTTCATCTCCTGAAAATCTCTCAAAATCTATAACCAACGTTGAA
FD532257       --> ..................................................
FD963224       --> ..................................................
EV528590       --> ..................................................
FD980529       --> ..................................................
FY442771       --> ..................................................
FD564008       --> ..................................................
FY441476       --> ..................................................
EY945969       --> ..................................................
EY914881       --> ..................................................
FY440153       --> GAACTTTTTCATCTCCTGAAAATCTCTCAAAATCTATAACCAACGTTGAA

               1401   -   1451
UN16344        --> TATCTTTTGTTGTCTTAGAAGCTTTCTTTCCTCTCTGTATTTTGTTGCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY430534       <-- TATCTTTTGTTGTCTTAGAAGCTTTCTTTCCTCTCTGTATTTTGTTGCAG
FD532257       --> ..................................................
FD963224       --> ..................................................
EV528590       --> ..................................................
FD980529       --> ..................................................
FY442771       --> ..................................................
FD564008       --> ..................................................
FY441476       --> ..................................................
EY945969       --> ..................................................
EY914881       --> ..................................................
FY440153       --> TATCTTTTGTTGTCTTAGAAGCTTTCTTTCCTCTCTGTATTTTGTTGCAG

               1451   -   1501
UN16344        --> AGTTTCTTAATCTTTGAAATTTTTGTCCCTGAAATAATTTGAAAACTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY430534       <-- AGTTTCTTAATCTTTGAAATTTTTGTCCCTGAAATAATTTGAAAACTTTT
FD532257       --> ..................................................
FD963224       --> ..................................................
EV528590       --> ..................................................
FD980529       --> ..................................................
FY442771       --> ..................................................
FD564008       --> ..................................................
FY441476       --> ..................................................
EY945969       --> ..................................................
EY914881       --> ..................................................
FY440153       --> AGTTTCTTAATCTTTGAAATTTTTGTCCCTGAAATAATTTGAAAACTTTT

               1501   -   1551
UN16344        --> GCTATACATTGACATTTCTTGTTTTGAGAATACTTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY430534       <-- GCTATACATTGACATTTCTTGTTTTGAGAATACTTAT
FD532257       --> .....................................
FD963224       --> .....................................
EV528590       --> .....................................
FD980529       --> .....................................
FY442771       --> .....................................
FD564008       --> .....................................
FY441476       --> .....................................
EY945969       --> .....................................
EY914881       --> .....................................
FY440153       --> GCTATACATTGAC........................