1      -     51
UN16349        --> GGAACAAAAGAGAGACACAAGTTAAAGTACTGTGCAAGTAAAAGATTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546444       <-- GGAACAAAAGAGAGACACAAGTTAAAGTACTGTGCAAGTAAAAGATTGTT
EW727941       <-- GGAACAAAAGAGAGACACAAGTTAAAGTACTGTGCAAGTAAAAGATTGTT
EX899143       <-- GGAACAAAAGAGAGACACAAGTTAAAGTACTGTGCAAGTAAAAGATTGTT
FD565290       <-- GGAACAAAAGAGAGACACAAGTTAAAGTACTGTGCAAGTAAAAGATTGTT
EV551330       --> GGAACAAAAGAGAGACACAAGTTAAAGTACTGTGCAAGTAAAAGATTGTT
EX894889       --> GGAACAAAAGAGAGACACAAGTTAAAGTACTGTGCAAGTAAAAGATTGTT
FD561008       --> GGAACAAAAGAGAGACACAAGTTAAAGTACTGTGCAAGTAAAAGATTGTT
FD562445       --> GGAACAAAAGAGAGACACAAGTTAAAGTACTGTGCAAGTAAAAGATTGTT
EW714318       --> ..................................................
EW723066       --> ..................................................

               51     -    101
UN16349        --> TATCACCATTTCTATCTTTATTCTTTAACCATGAGATCTTCTACCTGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546444       <-- TATCACCATTTCTATCTTTATTCTTTAACCATGAGATCTTGTACCTGGTG
EW727941       <-- TATCACCATTTCTACCTGTATTCTTTAACCATGAGATCTTCTACCTGGTG
EX899143       <-- TATCACCATTTCTACCTGTATTCTTTAACCATGAGATCTTCTACCTGGTG
FD565290       <-- TATCACCATTTCTATCTTTATTCTTTAACCATGAGATCTTCTACCTGGTG
EV551330       --> TATCACCATTTCTATCTTTATTCTTTAACCATGAGATCTTGTACCTGGTG
EX894889       --> TATCACCATTTCTACCTGTATTCTTTAACCATGAGATCTTCTACCTGGTG
FD561008       --> TATCACCATTTCTATCTTTATTCTTTAACCATGAGATCTTCTACCTGGTG
FD562445       --> TATCACCATTTCTATCTTTATTCTTTAACCATGAGATCTTCTACCTGGTG
EW714318       --> TATCACCATTTCTATCTTTATTCTTTAACCATGAGATCTTCTACCTGGTG
EW723066       --> ..................................................

               101    -    151
UN16349        --> TATAGTTTTTT-GTGTTCTCATCTTTCTCGTAATTAGTGATGGTAAAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546444       <-- TATAGTTTTTT-GTGTTCTCATCTTTCTCGTAATTAGTGATGGTAAAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW727941       <-- TATAGTTTTTT-GTGTTCTCATCTTTCTCGTAGTTAGTGATGGTAAAAAA  Raphanus sativus cv Early Scarlet Globe
EX899143       <-- TATAGTTTTTT-GTGTTTTCATCTTTCTCGTAGTTAGTGATGGTAAAAAA  Raphanus sativus cv Early Scarlet Globe
FD565290       <-- TATAGTTTTTT-GTGTTCTCATCTTTCTCGTAATTAGTGATGGTAAAAAA  Raphanus sativus var. oleiformis
EV551330       --> TATAGTTTTTT-GTGTTCTCATCTTTCTCGTAATTAGTGATGGTAAAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX894889       --> TATAGTTTTTT-GTGTTCTCATCTTTCTCGTAGTTAGTGATGGTAAAAAA  Raphanus sativus cv Early Scarlet Globe
FD561008       --> TATAGTTTTTT-GTGTTCTCATCTTTCTCGTAATTAGTGATGGTAAAAAA  Raphanus sativus var. oleiformis
FD562445       --> TATAGTTTTTT-GTGTTCTCATCTTTCTCGTAATTAGTGATGGTAAAAAA  Raphanus sativus var. oleiformis
EW714318       --> TATAGTTTTTTTGTGTTCTCATCTTTCTCGTAATTAGTGATGGTAAAAAA  Raphanus sativus var. oleiformis
EW723066       --> .................CTCATCTTTCTCGTAGTTAGTGATGGTAAAAAA  Raphanus sativus cv Early Scarlet Globe

               151    -    201
UN16349        --> GATAAAGAGGATCTTCCGGATAAATATTGTCCAAGAATAGAAGATATCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546444       <-- GATAAAGAGGATCTTCCGGATAAATATTGTCCAAGAATAGAAGATATCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW727941       <-- GATAAAGAGGATCTTCCGGATAAATATTGTCCAGCAATAGAAGATATCGA  Raphanus sativus cv Early Scarlet Globe
EX899143       <-- GATAAAGAGGATCTTCCGGATAAATATTGTCCAGCAATAGAAGATATCGA  Raphanus sativus cv Early Scarlet Globe
FD565290       <-- GATAAAGAGGATCTTCCGGATAAATATTGTCCAAGAATAGAAGATATCGA  Raphanus sativus var. oleiformis
EV551330       --> GATAAAGAGGATCTTCCGGATAAATATTGTCCAAGAATAGAAGATATCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX894889       --> GATAAAGAGGATCTTCCGGATAAATATTGTCCAGCAATAGAAGATATCGA  Raphanus sativus cv Early Scarlet Globe
FD561008       --> GATAAAGAGGATCTTCCGGATAAATATTGTCCAAGAATAGAAGATATCGA  Raphanus sativus var. oleiformis
FD562445       --> GATAAAGAGGATCTTCCGGATAAATATTGTTCAAGAATAGAAGATATCGA  Raphanus sativus var. oleiformis
EW714318       --> GATAAAGAGGATCTTCCGGATAAATATTGTCCAAGAATAGAAGATATCGA  Raphanus sativus var. oleiformis
EW723066       --> GATAAAGAGGATCTTCCGGATAAATATTGTCCAGCAATAGAAGATATCGA  Raphanus sativus cv Early Scarlet Globe

               201    -    251
UN16349        --> AGGAAACTGCAAAGATAATGGCCGGAAAGTGTGTGCGAAGTATATGACGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546444       <-- AGGAAACTGCGAAGATAATGGCCGGAAAGTGTGTGCGAAGTATATGACGT
EW727941       <-- AGGAAACTGCAAAGATAATGGCCGGAAAGTGTGTGCGAAGTATATGACGT
EX899143       <-- AGGAAACTGCAAAGATAATGGCCGGAAAGTGTGTGCGAAGTATATGACGT
FD565290       <-- AGGAAACTGCAAAGATAATGGCCGGAAAGTGTGTGCGAAGTATATGACGT
EV551330       --> AGGAAACTGCGAAGATAATGGCCGGAAAGTGTGTGCGAAGTATATGACGT
EX894889       --> AGGAAACTGCAAAGATAATGGCCGGAAAGTGTGTGCGAAGTATATGACGT
FD561008       --> AGGAAACTGCAAAGATAATGGCCGGAAAGTGTGTGCGAAGTATATGACGT
FD562445       --> AGGAAACTGCAAAGATAATGGCCGGAAAGTGTGTGCGAAGTATATGACGT
EW714318       --> AGGAAACTGCAAAGATAATGGCCGGAAAGTGTGTGCGAAGTATATGACGT
EW723066       --> AGGAAACTGCAAAGATAATGGCCGGAAAGTGTGTGCGAAGTATATGACGT

               251    -    301
UN16349        --> CAACTTATAAGTTGAATTATTTTAATTGCACATGTGACAACATCAACATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546444       <-- CAACTTATAAGTTGAATTATTTTAATTGCACATGTGACAACATCAACATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW727941       <-- CAACTTATAAGCTGAATTATTTTAATTGCACATGTGACAACATCAACATG  Raphanus sativus cv Early Scarlet Globe
EX899143       <-- CAACTTATAAGCTGAATTATTTTAATTGCACATGTGACAACATCAACATG  Raphanus sativus cv Early Scarlet Globe
FD565290       <-- CAACTTATAAGTTGAATTATTTTAATTGCACATGTGACAACATCAACATG  Raphanus sativus var. oleiformis
EV551330       --> CAACTTATAAGTTGAATTATTTTAATTGCACATGTGACAACATCAACATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX894889       --> CAACTTATAAGCTGAATTATTTTAATTGCACATGTGACAACATCAACATG  Raphanus sativus cv Early Scarlet Globe
FD561008       --> CAACTTATAAGTTGAATTATTTTAATTGCACATGTGACAACATCAACATG  Raphanus sativus var. oleiformis
FD562445       --> CAACTTATAAGTTGAATTATTTTAATTGCACATGTGACAACATCAACATG  Raphanus sativus var. oleiformis
EW714318       --> CAACTTATAAGTTGAATTATTTTAATTGCACATGTGACAACATCAACATG  Raphanus sativus var. oleiformis
EW723066       --> CAACTTATAAGCTGAATTATTTTAATTGCACATGTGACAACATCAACATG  Raphanus sativus cv Early Scarlet Globe

               301    -    351
UN16349        --> TTACATAAGATCAAGCGTTATTGCGAATGTCAGTCACTATGTAGCGACCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546444       <-- TTACATAAGATCAAGCGTTATTGCGAATGTCAGTCACTATGTAGCGACCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW727941       <-- TTACATAAGATCAAGCGTTATTGCGAATGTCAGTCACTATGTAGCGACCA  Raphanus sativus cv Early Scarlet Globe
EX899143       <-- TTACATAAGATCAAGCGTTATTGCGAATGTCAGTCACTATGTAGCGACCA  Raphanus sativus cv Early Scarlet Globe
FD565290       <-- TTACATAAGATCAAGCGTTATTGCGAATGTCAGTCACTATGTAGCGACCT  Raphanus sativus var. oleiformis
EV551330       --> TTACATAAGATCAAGCGTTATTGCGAATGTCAGTCACTATGTAGCGACCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX894889       --> TTACATAAGATCAAGCGTTATTGCGAATGTCAGTCACTATGTAGCGACCA  Raphanus sativus cv Early Scarlet Globe
FD561008       --> TTACATAAGATCAAGCGTTATTGCGAATGTCAGTCACTATGTAGCGACCT  Raphanus sativus var. oleiformis
FD562445       --> TTACATAAGATCAAGCGTTATTGCGAATGTCAGTCACTATGTAGCGACCT  Raphanus sativus var. oleiformis
EW714318       --> TTACATAAGATCAAGCGTTATTGCGAATGTCAGTCACTATGTAGCGACCT  Raphanus sativus var. oleiformis
EW723066       --> TTACATAAGATCAAGCGTTATTGCGAATGTCAGTCACTATGTAGCGACCA  Raphanus sativus cv Early Scarlet Globe

               351    -    401
UN16349        --> CCCTCCACCTTCACCGATCCATCCCCCACCTGCACCGATCCATTCTCGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546444       <-- CCCCCCACCTTCACCGATCCATCCCCCACCTGCACCGATCCATTCTCGTT
EW727941       <-- CCCTCCACCTTCACCGATCCATCCCCCACCTGCACCGATCCATTCTCGTT
EX899143       <-- CCCTCCCCCTTCACCGATCCATCCCCCACCTGCACCGATCCATTCTCGTT
FD565290       <-- CCCTCCACCTTCACCGATCCATCCCCCCCCTG--CTGATCCATTCTCGTT
EV551330       --> CCCCCCACCTTCACCGATCCATCCCCCACCTGCACCGATCCATTCTCGTT
EX894889       --> CCCTCCACCTTCACCGATCCATCCCCCACCTGCACCGATCCATTCTCGTT
FD561008       --> CCCTCCACCTTCACCGATCCATCCCCCACCTGC--TGATCCATTCTCGTT
FD562445       --> CCCTCCACCTTCACCGATCCATCCCCCACCTGCACCGATCCATTCTCGTT
EW714318       --> CCCTCCACCTTCACCGATCCATCCCCCACCTGCACCGATCCATTCTCGTT
EW723066       --> CCCTCCACCTTCACCGATCCATCCCCCACCTGCACCGATCCATTCTCGTT

               401    -    451
UN16349        --> AAATAACATCTCATTAGTCCTTCCTAATAACAAATTAAAGTGAAGTTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546444       <-- AAATAACATCTCATTAGTCCTTCCTAATAACAAATTAAAGTGAAGTTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW727941       <-- AAATAACATCTCACTAGTCCTTCCTAATAACAAACTAAAGTGAAGTTCTG  Raphanus sativus cv Early Scarlet Globe
EX899143       <-- AAATAACATCTCACTAGTCCTTCCTAATAACAAACTAAAGTGAAGTTCTG  Raphanus sativus cv Early Scarlet Globe
FD565290       <-- AATTAACATCTCATTAGTCCTTCCTAATAACAAATTAAAGTGAAGTTTTG  Raphanus sativus var. oleiformis
EV551330       --> AAATAACATCTCATTAGTCCTTCCTAATAACAAATTAAAGTGAAGTTCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX894889       --> AAATAACATCTCACTAGTCCTTCCTAATAACAAACTAAAGTGAAGTTCTG  Raphanus sativus cv Early Scarlet Globe
FD561008       --> AATTAACATCTCATTAGTCCTTCCTAATAACAAATTAAAGTGAAGTTCTG  Raphanus sativus var. oleiformis
FD562445       --> AAATAACATCTCATTAGTCCTTCCTAATAACAAATTAAAGTGAAGTTCTG  Raphanus sativus var. oleiformis
EW714318       --> AAATAACATCTCATTAGTCCTTCCTAATAACAAATTAAAGTGAAGTTCTG  Raphanus sativus var. oleiformis
EW723066       --> AAATAACATCTCACTAGTCCTTCCTAATAACAAACTAAAGTGAAGTTCTG  Raphanus sativus cv Early Scarlet Globe

               451    -    501
UN16349        --> AGACTTTGTAGTGTGGAGATCACACACA--GATAAATTCTGTTAGTTGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546444       <-- AGACTTTGTAGTGTGGAGATCACACACA--GATAAATTC--TTAGTTGTC
EW727941       <-- AGACTTTGTAGTGTGGAGATCACACACACAAAGAAATTCTGTTAGTCGTC
EX899143       <-- AGACTTTGTAGTGTGGAGAT..............................
FD565290       <-- AGACTTTGTAGTGTGGAGATCACACACA--GATAAATTCTGTTAGTTGTC
EV551330       --> AGACTTTGTAGTGTGGAGATCACACACA--GATAAATTCT--TAGTTGTC
EX894889       --> AGACTTTGTAGTGTGGAGATCACACACACAAAGAAATTCTGTTAGTCGTC
FD561008       --> AGACTTTGTAGTGTGGAGATCACACACA--GATAAATTCTGTTAGTTGTC
FD562445       --> AGACTTTGTAGTGTGGAGATCACACACA--GATAAATTCTGTTAGTTGTC
EW714318       --> AGACTTTGTAGTGTGGAGATCACACACA--GATAAATTCTGTTAGTTGTC
EW723066       --> AGACTTTGTAGTGTGGAGATCACACACACAAAGAAATTCTGTTAGTCGTC

               501    -    551
UN16349        --> AATCTTTCTTTTGTAATAAAGTCATGAGGATATTTTATAACTAGTATGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546444       <-- AATCTTTCTTTTGTAATAAAGTCATGAGGATATTTTATAACTAGTATGAG
EW727941       <-- AATCTTTCTTTTGTAATAAAGTCATTAGGATATTTTATAACTAGTATGAG
EX899143       <-- ..................................................
FD565290       <-- AATCTTTCTTTTGTAATAAAGTCATGAGGATATTTTATAACTAGTATGAG
EV551330       --> AATCTTTCTTTTGTAATAAAGTCATGAGGATATTTTATAACTAGTATGAG
EX894889       --> AATCTTTCTTTTGTAATAAAGTCATTAGGATATTTTATAACTAGTATGAG
FD561008       --> AATCTTTCTTTTGTAATAAAGTCATGAGGATATTTTATAACTAGTATGAG
FD562445       --> AACCTTTCTTTTGTAATAAAGTCATGAGGATATTTTATAACTAGTATGAG
EW714318       --> AATCTTTCTTTTGTAATAAAGTCATGAGGATAATTTATAACTAGTATGAG
EW723066       --> AATCTTTCTTTTGTAATAAAGTCATTAGGATATTTTATAACTAGTATGAG

               551    -    601
UN16349        --> TTTCTCAATCAATCTGTTTTCCAGATTTTGTAGAATTCAGATTATAAATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546444       <-- TTTCTCGATCAATCTGTTTTCCAGATTTTGTAGAATTCAGATTATAAATT
EW727941       <-- TTTCTCA...........................................
EX899143       <-- ..................................................
FD565290       <-- TTTCTCAATCAATCTGTTTTCCAGATTTTGTAGAATACAGATTATAAATT
EV551330       --> TTTCTCGATCAATCTGTTTTCCAGATTTTGTAGAATTCAGATTATAAATT
EX894889       --> T.................................................
FD561008       --> TTTCTCAATCAATCTGTTTTCCAGATTTTGTAGAA...............
FD562445       --> TTTCTC............................................
EW714318       --> TTTCTCAATCAATCTGTTTTCCAGATTTTGTAGAATACAGATTATAAATT
EW723066       --> TTTCTCAAcc........................................

               601    -    651
UN16349        --> TTGCGACAATTAATGTATGTTTAAACTGTTAATATATTCTATAAATGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546444       <-- TTGCGACAATTAATGc..................................
EW727941       <-- ..................................................
EX899143       <-- ..................................................
FD565290       <-- TTGCGACAATTAATGTATGTTTAAACTGTTAATATATTCTATAAATGAAT
EV551330       --> TTGCGACAATTAATGc..................................
EX894889       --> ..................................................
FD561008       --> ..................................................
FD562445       --> ..................................................
EW714318       --> TTGCGACAATTAATGTATGTTTAAACTGTT....................
EW723066       --> ..................................................

               651    -    701
UN16349        --> AACTTTTAGAACTT
                   ~~~~~~~~~~~~~~
EV546444       <-- ..............
EW727941       <-- ..............
EX899143       <-- ..............
FD565290       <-- AACTTTTAGAACTT
EV551330       --> ..............
EX894889       --> ..............
FD561008       --> ..............
FD562445       --> ..............
EW714318       --> ..............
EW723066       --> ..............