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Alignment for radish unigene UN16356

               1      -     51
UN16356        --> ATAGGCAAAGTAGTTATTATAGTCGATAAAATATGAGGTGATTTAGTTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940379       <-- ATAGGCAAAGTAGTTATTATAGTCGATAAAATATGAGGTGATTGAGTTAT
FD938236       <-- ..AGGCAAAGTAGTTATTATAGTCGATAAAATATGAGGTGATTGAGTTAT
EX758128       <-- ................................ATGAGATGATTTAGTTAT
EY899635       <-- ................................ATGAGGTAATTTAGTTAT
FD535865       <-- ...................................ttttttTTTAGTTAT
EV528546       <-- ............................................AGTTAT
EV538923       <-- ............................................AGTTAT
EX763949       <-- ............................................AGTTAT
EX766136       <-- ............................................AGTTAT
EX897371       <-- ............................................AGTTAT
EY900355       <-- ............................................AGTTAT
EY948170       <-- ...........................................cAGTTAT
FD535441       <-- ............................................AGTTAT
FD978308       <-- ............................................AGTTAT
FD981478       <-- ............................................AGTTAT
EY948573       <-- .............................................GTTAT
FD962922       <-- ............................................gGTTAT
EV569889       <-- ................................................AT
EV569895       <-- ................................................AT
EX897872       <-- ................................................AT
EY896793       <-- ................................................AT
EY896857       <-- ................................................AT
FD561834       <-- ................................................AT
FD937884       <-- ................................................AT
FD548945       <-- ................................................cT
EX748261       <-- ..................................................
EW735626       <-- .................................................a
EW723950       <-- ..................................................
EW733855       <-- ..................................................
FD549087       <-- ..................................................
EV538037       <-- ..................................................
FD986331       <-- ..................................................
EY924459       <-- ..................................................
EY924810       <-- ..................................................
EY895361       --> ................................ATGAGGTAATTTAGTTAT
EY943922       --> ...........................................cAGTTAT
FD977232       --> ............................................AGTTAT
FD959369       --> ............................................gGTTAT
EW727746       --> ................................................AT
EX901551       --> ................................................AT
EY893260       --> ................................................AT
EY893307       --> ................................................AT
FD974581       --> ................................................AT
FD545063       --> ................................................cT
EW739691       --> .................................................a
EX769152       --> ...............................................cta
EV542137       --> ..................................................
EY920105       --> ..................................................
EY920416       --> ..................................................
EW728012       --> ..................................................
EX752249       --> ..................................................
EV532503       --> ..................................................

               51     -    101
UN16356        --> GATGCCAAAATTTTATTTAGAAATAAATGAAAC-ATGACCTTTTAATGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940379       <-- GATGCCAAAATTTTATTTAGAAATAAATGAAAC-ATGACTTTCTAATGAA  Raphanus sativus var. oleiformis
FD938236       <-- GATGCCAAAATTTTATTTAGAAATAAATGAAAC-ATGACTTTCTAATGAA  Raphanus sativus var. oleiformis
EX758128       <-- GATGCCAAAATTTTATTTAGAAATAAATGAAAC-ATGACCTTCTAATGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899635       <-- GATGCCAAAATTTTATTTAGAAATAAATGAAAC-ATGACCTTTTAATGAA  Raphanus raphanistrum subsp. maritimus
FD535865       <-- GATGCCAAAATTTTATTTAGAAATAAATGAAAC-ATGACCTTTTAATGAA  Raphanus raphanistrum subsp. maritimus
EV528546       <-- GATGCCAAAATTTTATTTAGAAATAAATGAAAC-ATGACCTTTTAATGAT  Raphanus raphanistrum subsp. maritimus
EV538923       <-- GATGCCAAAATTTTATTTAGAAATAAATGAAAC-ATGACCTTCTAATGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763949       <-- GATGCCAAAATTTTATTTAGAAATAAATGAAAC-ATGATTTTCTAATGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX766136       <-- -ATGCCAAAATTTTACTTAGAAATAAATGAAAC-ATGACCTTTTAATGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897371       <-- GATGCCAAAATTTTATTTAGAAATAAATGAAAC-ATGACCTTTTAATGAA  Raphanus sativus cv Early Scarlet Globe
EY900355       <-- GATGCCAAAATTTTATTTAGAAATAAATGAAAC-ATGACCTTTTAATGAT  Raphanus raphanistrum subsp. maritimus
EY948170       <-- GATGCCAAAATTTTATTTAGAAATAAATGAAAC-ATGACCTTTTAATGAA  Raphanus sativus cv Rat-Tail Radish #3870
FD535441       <-- GATGCCAAAATTTTATTTAGAAATAAATGAAAC-ATGACCTTTTAATGAA  Raphanus raphanistrum subsp. maritimus
FD978308       <-- GATGCCAAAATTTTATTTAGAAATAAATGAAAC-ATGACCTTTTAATGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981478       <-- GATGCCAAAATTTTATTTAGAAATAAATGAAAC-ATGATTTTCTAATGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY948573       <-- GATGCCAAAATTTTATTTAGAAATAAATGAAAC-ATGACCTTTTAATGAA  Raphanus sativus cv Rat-Tail Radish #3870
FD962922       <-- GATGCCAAAATTTTATTTAGAAATAAATGAAACTATGATTTTCTAATGAA  Raphanus raphanistrum subsp. maritimus
EV569889       <-- GATGCCAAAATTTTATTTAGAAATAAATGAAAC-ATGACCTTTTAATGAA  Raphanus raphanistrum subsp. landra
EV569895       <-- GATGCCAAAATTTTATTTAGAAATAAATGAAAC-ATGACCTTTTAATGAA  Raphanus raphanistrum subsp. landra
EX897872       <-- GATGCCAAAATTTTATTTAGAAATAAATGAAAC-ATGACCTTTTAATGAA  Raphanus sativus cv Early Scarlet Globe
EY896793       <-- GATGCCAAAATTTTATTTAGAAATAAATGAAAC-ATGACCTTTTAATGAA  Raphanus raphanistrum subsp. maritimus
EY896857       <-- GATGCCAAAATTTTATTTAGAAATAAATGAAAC-ATGATTTTCTAATGAA  Raphanus raphanistrum subsp. maritimus
FD561834       <-- GATGCCAAAATTTTATTTAGAAATAAATGAAAC-ATGACTTTCTAATGAA  Raphanus sativus var. oleiformis
FD937884       <-- GATGCCAAAATTTTATTTAGAAATAAATGAAAC-ATGACTTTCTAATGAA  Raphanus sativus var. oleiformis
FD548945       <-- GATGCCAAAATTTTATTTAGAAATAAATGAAAC-ATGATTTTCTAATGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX748261       <-- GATGCCAAAATTTTATTTAGAAATAAATGAAAC-ATGATTTTCTAATGAA  Raphanus raphanistrum subsp. maritimus
EW735626       <-- tATGCCAAAATTTTATTTAGAAATAAATGAAAC-ATGACCTTTTAATGAA  Raphanus sativus cv Rat-Tail Radish #3870
EW723950       <-- ..............ATTTAGAAATAAATGAAAC-ATGACCTTTTAATGAA  Raphanus sativus cv Early Scarlet Globe
EW733855       <-- ..................AGAAATAAATGAAAC-ATGACCTTTTAATGAA  Raphanus sativus cv Rat-Tail Radish #3870
FD549087       <-- ..................AGAAATAAATGAAAC-ATGACCTTTTAATGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV538037       <-- ..................cGAAATAAATGAAAC-ATGACCTTCTAATGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD986331       <-- ........................AAATGAAAC-CTGACCTTTTAATGAA  Raphanus raphanistrum subsp. landra
EY924459       <-- ............................................agTGAA  Raphanus raphanistrum subsp. landra
EY924810       <-- ............................................agTGAA  Raphanus raphanistrum subsp. landra
EY895361       --> GATGCCAAAATTTTATTTAAAAATAAATGAAAC-ATGACCTTTTAATGAA  Raphanus raphanistrum subsp. maritimus
EY943922       --> GATGCCAAAATTTTATTTAGAAATAAATGAAAC-ATGACCTTTTAATGAA  Raphanus sativus cv Rat-Tail Radish #3870
FD977232       --> GATGCCAAAATTTTATTTAGAAATAAATGAAAC-ATGATTTTCTAATGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD959369       --> GATGCCAAAATTTTATTTAGAAATAAATGAAAC-ATGATTTTCTAATGAA  Raphanus raphanistrum subsp. maritimus
EW727746       --> GATGCCAAAATTTTATTTAGAAATAAATGAAAC-ATGACTTTCTAATGAA  Raphanus sativus cv Early Scarlet Globe
EX901551       --> GATGCCAAAATTTTATTTAGAAATAAATGAAAC-ATGACCTTTTAATGAA  Raphanus sativus cv Early Scarlet Globe
EY893260       --> GATGCCAAAATTTTATTTAAAAATAAATGAAAC-ATGACCTTTTAATGAA  Raphanus raphanistrum subsp. maritimus
EY893307       --> GATGCCAAAATTTTATTTAGAAATAAATGAAAC-ATGATTTTCTAATGAA  Raphanus raphanistrum subsp. maritimus
FD974581       --> GATGCCAAAATTTTATTTAGAAATAAATGAAAC-ATGACCTTTTAATGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD545063       --> GATGCCAAAATTTTATTTAGAAATAAATGAAAC-ATGATTTTCTAATGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW739691       --> tATGCCAAAATTTTATTTAAAAATAAATGAAAC-ATGACCTTTTAATGAA  Raphanus sativus cv Rat-Tail Radish #3870
EX769152       --> tATGCCAAAATTTTATTTAGAAATAAATGAAAC-ATGACCTTTTAATGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV542137       --> ..................cGAAATAAATGAAAC-ATGACCTTCTAATGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY920105       --> ............................................agTGAA  Raphanus raphanistrum subsp. landra
EY920416       --> ............................................agTGAA  Raphanus raphanistrum subsp. landra
EW728012       --> ................................................AA  Raphanus sativus cv Early Scarlet Globe
EX752249       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV532503       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               101    -    151
UN16356        --> GATCTATATTTT-AAATATCACACATGAAAAGAAGTTGTGACTTATTAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940379       <-- GATCTATTTTTT-AAATATCACACATCAAAAGAAGTTGTGACTTATTAAA  Raphanus sativus var. oleiformis
FD938236       <-- GATCTATTTTTT-AAATATCACACATCAAAAGAAGTTGTGACTTATTAAA  Raphanus sativus var. oleiformis
EX758128       <-- GATCTATTTTTT-AAATATCGCACATGAAAAGAAGTTGTGACTTATTAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899635       <-- GATCTATATTTT-ACATATCACACATGAAAAGAAGTTGTGACTTATTAAA  Raphanus raphanistrum subsp. maritimus
FD535865       <-- GATCTATATTTT-ACATATCACACATGAAAAGAAGTTGTGACTTATTAAA  Raphanus raphanistrum subsp. maritimus
EV528546       <-- GATCTATATTTT-ACATATCACACATGAAAAGAAGTTGTGACTTATTAAA  Raphanus raphanistrum subsp. maritimus
EV538923       <-- GATCTATTTTTT-AAATATCACACGTGAAAAAAAGTTGTGACTTATTAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763949       <-- GATCTATTTTTT-AAATATCACACATAAAAAGAAGTTGTGACTTATTAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX766136       <-- GATCTATATTTT-ACATATCACACCTGAAAAGAAGTTGTGACTTATTAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897371       <-- GATCTATATTAT-AAATATCACACATGAAAAGAAGTTGTGACTTATTAAA  Raphanus sativus cv Early Scarlet Globe
EY900355       <-- GATCTATATTTT-ACATATCACACATGAAAAGAAGTTGTGACTTATTAAA  Raphanus raphanistrum subsp. maritimus
EY948170       <-- GATCTATATTTT-ACATATCACACATGAAAAGAAGTTGTGACTTATTAAA  Raphanus sativus cv Rat-Tail Radish #3870
FD535441       <-- GATCTATATTTT-ACATATCACACATGAAAAGAAGTTGTGACTTATTAAA  Raphanus raphanistrum subsp. maritimus
FD978308       <-- GATCTATATTTT-AAATATCACACATGAAAATAAGTTGTGACTTATTAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981478       <-- GATCTATTTTTT-AAATATCACACATAAAAAGAAGTTGTGACTTATTAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY948573       <-- GATCTATATTTT-ACATATCACACATGAAAAGAAGTTGTGACTTATTAAA  Raphanus sativus cv Rat-Tail Radish #3870
FD962922       <-- GATCTATTTTTTTAAATATCACACATGAAAAGAAGTTGTGACTTATTAAA  Raphanus raphanistrum subsp. maritimus
EV569889       <-- GATCTATATTAT-AAATATCACACATGAAAAGAAATTGTGACTTATTAAA  Raphanus raphanistrum subsp. landra
EV569895       <-- GATCTATATTAT-AAATATCACACATGAAAAGAAATTGTGACTTATTAAA  Raphanus raphanistrum subsp. landra
EX897872       <-- GATCTATATTTT-AAATATCACACATGAAAATAAGTTGTGACTTATTAAA  Raphanus sativus cv Early Scarlet Globe
EY896793       <-- GATCTATATTTT-ACATATCACACATGAAAAGAAGTTGTGACTTATTAAA  Raphanus raphanistrum subsp. maritimus
EY896857       <-- GATCTATTTTTTTAAATATCACACATGAAAAGAAGTTGTGACTTATTAAA  Raphanus raphanistrum subsp. maritimus
FD561834       <-- GATCTATTTTTT-AAATATCACACATCAAAAGAAGTTGTGACTTATTAAA  Raphanus sativus var. oleiformis
FD937884       <-- GATCTATTTTTT-AAATATCACACATCAAAAGAAGTTGTGACTTATTAAA  Raphanus sativus var. oleiformis
FD548945       <-- GATCTATTTTTT-AAATATCACACATAAAAAGAAGTTGTGACTTATTAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX748261       <-- GATCTATTTTTTTAAATATCACACATGAAAAGAAGTTGTGAATTATTAAA  Raphanus raphanistrum subsp. maritimus
EW735626       <-- GATCTATATTTT-ACATATCACACATGAAAAGAAGTTGTGACTTATTAAA  Raphanus sativus cv Rat-Tail Radish #3870
EW723950       <-- GATCTATATTAT-AAATATCACACATGAAAAGAAGTTGTGACTTATTAAA  Raphanus sativus cv Early Scarlet Globe
EW733855       <-- GATCTATATTTT-AAATATCACACATGAAAATAAGTTGTGACTTATTAAA  Raphanus sativus cv Rat-Tail Radish #3870
FD549087       <-- GATCTATATTTT-ACATATCACACATGAAAAGAAGTTGTGACTTATTAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV538037       <-- GATCTATTTTTTTAAATATCACACGTGAAAAAAAGTTGTGACTTATTAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD986331       <-- GATCTATATTAT-AAATATCACACATGAAAAGAAATTGTGACTTATTAAA  Raphanus raphanistrum subsp. landra
EY924459       <-- GATCTATATTAT-AAATATCACACATGAAAAGAAATTGTGACTTATTAAA  Raphanus raphanistrum subsp. landra
EY924810       <-- GATCTATATTAT-AAATATCACACATGAAAAGAAATTGTGACTTATTAAA  Raphanus raphanistrum subsp. landra
EY895361       --> AATCTATATTTT-ACATATCACACATGAAAAAAAGTTGTGACTTATTAAA  Raphanus raphanistrum subsp. maritimus
EY943922       --> GATCTATATTTT-ACATATCACACATGAAAAGAAGTTGTGACTTATTAAA  Raphanus sativus cv Rat-Tail Radish #3870
FD977232       --> GATCTATTTTTT-AAATATCACACATAAAAAGAAGTTGTGACTTATTAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD959369       --> GATCTATTTTTTTAAATATCACACATGAAAAGAAGTTGTGACTTATTAAA  Raphanus raphanistrum subsp. maritimus
EW727746       --> GATCTATTTTTT-AAATATCACATATGAAAAGAAGTTGTGACTTATTAAA  Raphanus sativus cv Early Scarlet Globe
EX901551       --> GATCTATATTTT-AAATATCACACATGAAAATAAGTTGTGACTTATTAAA  Raphanus sativus cv Early Scarlet Globe
EY893260       --> GATCTATATTTT-ACATATCACACATGAAAAGAAGTTGTGACTTATTAAA  Raphanus raphanistrum subsp. maritimus
EY893307       --> GATCTATTTTTTTAAATATCACACATGAAAAGAAGTTGTGACTTATTAAA  Raphanus raphanistrum subsp. maritimus
FD974581       --> GATCTATATTTT-AAATATCACACATGAAAATAAGTTGTGACTTATTAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD545063       --> GATCTATTTTTT-AAATATCACACATAAAAAGAAGTTGTGACTTATTAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW739691       --> GATCTATATTTT-ACATATCACACATGAAAAGAAGTTGTGACTTATTAAA  Raphanus sativus cv Rat-Tail Radish #3870
EX769152       --> GATCTATATTTT-ACATATCACACATGAAAAGAAGTTGTGACTTATTAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV542137       --> GATCTATTTTTTTAAATATCACACGTGAAAAAAAGTTGTGACTTATTAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY920105       --> GATCTATATTAT-AAATATCACACATGAAAAGAAATTGTGACTTATTAAA  Raphanus raphanistrum subsp. landra
EY920416       --> GATCTATATTAT-AAATATCACACATGAAAAGAAATTGTGACTTATTAAA  Raphanus raphanistrum subsp. landra
EW728012       --> GATCTATATTAT-AAATATCACACATGAAAAGAAGTTGTGACTTATTAAA  Raphanus sativus cv Early Scarlet Globe
EX752249       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV532503       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               151    -    201
UN16356        --> AGTGGAATAGATTTGAGCTTC-A-AT--GTAGGTTAAAAATATCAGCGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940379       <-- AGTGGAATATAATTGAGCTTC-A-ATATGTAGGTTAAAAATATCAGCGAC  Raphanus sativus var. oleiformis
FD938236       <-- AGTGGAATATAATTGAGCTTC-A-ATATGTAGGTTAAAAATATCAGCGAC  Raphanus sativus var. oleiformis
EX758128       <-- AATGGAATAGATTTGAGCTTC-A-AT--GTAGGTTAAAAATATCAGCGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899635       <-- AGTGGAATAGATTTGAGCTTC-A-AT--GTAGGTTAAAAATATCAGCGAC  Raphanus raphanistrum subsp. maritimus
FD535865       <-- AGTGGAATAGATTTGAGCTTC-A-AT--GTAGGTTAAAAATATCAGCGAC  Raphanus raphanistrum subsp. maritimus
EV528546       <-- AGTGGAATAGATTTGAGCTTC-A-AT--GTAGGTTAAAAATATCAGCGAC  Raphanus raphanistrum subsp. maritimus
EV538923       <-- AATGGAATAGATTTGAGCTTC-A-AT--GTAGGTTAAAAATATCAGCGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763949       <-- AATGGAATATATTTGAGCTTC-A-AT--GTAGGTTAAAAATATCAGCGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX766136       <-- AGTGGAATAGATTTGAGCTTC-A-AT--GTAGGTTAAAAATATCAGCGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897371       <-- AGTGGAATAGATTTGAGCTTC-A-AT--GTAGGTTAAAAATATCAGAGAC  Raphanus sativus cv Early Scarlet Globe
EY900355       <-- AGTGGAATAGATTTGAGCTTC-A-AT--GTAGGTTAAAAATATCAGCGAC  Raphanus raphanistrum subsp. maritimus
EY948170       <-- AGTGAAATAGATTTGAGCTTC-A-AT--GTAGGTTAAAAATATCAGCGAC  Raphanus sativus cv Rat-Tail Radish #3870
FD535441       <-- AGTGGAATAGATTTGAGCTTC-A-AT--GTAGGTTAAAAATATCAGCGAC  Raphanus raphanistrum subsp. maritimus
FD978308       <-- AGTGGAATAGATTTGAGCTTC-A-AT--GTAGGTTAAAAATATCAGCGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981478       <-- AATGGAATATATTTGAGCTTC-A-AT--GTAGGTTAAAAATATCAGCGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY948573       <-- AGTGAAATAGATTTGAGCTTC-A-AT--GTAGGTTAAAAATATCAGCGAC  Raphanus sativus cv Rat-Tail Radish #3870
FD962922       <-- AGTGGAATATATTTGAGCTTC-A-AT--GTAGGTTAAAAATATCAGCGAC  Raphanus raphanistrum subsp. maritimus
EV569889       <-- AGTGGAATAGATTTGAGCTTC-A-AT--GTAGGTTAAAAATATCAGCGAC  Raphanus raphanistrum subsp. landra
EV569895       <-- AGTGGAATAGATTTGAGCTTC-A-AT--GTAGGTTAAAAATATCAGCGAC  Raphanus raphanistrum subsp. landra
EX897872       <-- AGTGGAATAGATTTGAGCTTC-A-AT--GTAGGTTAAAAATATCAGCGAC  Raphanus sativus cv Early Scarlet Globe
EY896793       <-- AGTGGAATAGATTTGAGCTTC-A-AT--GTAGGTTAAAAATATCAGCGAC  Raphanus raphanistrum subsp. maritimus
EY896857       <-- AGTGGAATATATTTGAGCTTC-A-AT--GTAGGTTAAAAATATCAGCGAC  Raphanus raphanistrum subsp. maritimus
FD561834       <-- AGTGGAATATAATTGAGCTTC-A-ATATGTAGGTTAAAAATATCAGCGAC  Raphanus sativus var. oleiformis
FD937884       <-- AGTGGAATATAATTGAGCTTCGATAT--GTAGGTTAAAAATATCAGCGAC  Raphanus sativus var. oleiformis
FD548945       <-- AATGGAATATATCTGAGCTTC-A-AT--GTAGGTTAAAAATATCAGCGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX748261       <-- AGTGGAATATATTTGAGCTTC-A-AT--GTAGGTTAAAAATATCAGCGAC  Raphanus raphanistrum subsp. maritimus
EW735626       <-- AGTGGAATAGATTTGAGCTTC-A-AT--GTAGGTTAAAAATATCAGCGAC  Raphanus sativus cv Rat-Tail Radish #3870
EW723950       <-- AGTGGAATAGATTTGAGCTTC-A-AT--GTAGGTTAAAAATATCAGCGAC  Raphanus sativus cv Early Scarlet Globe
EW733855       <-- AGTGGAATAGATTTGAGCTTC-A-AT--GTAGGTTAAAAATATCAGCGAC  Raphanus sativus cv Rat-Tail Radish #3870
FD549087       <-- AGTGGAATAGATTTGAGCTTC-A-AT--GTAGGTTAAAAATATCAGCGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV538037       <-- AATGGAATAGATTTGAGCTTC-A-AT--GTGGGTTAAAAATATCAGCGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD986331       <-- AGTGGAATAGATTTGAGCTTC-A-AT--GTAGGTTAAAAATATCAGCGAC  Raphanus raphanistrum subsp. landra
EY924459       <-- AGTGGAATAGATTTGAGCTTC-A-AT--GTAGGTTAAAAATATCAGCGAC  Raphanus raphanistrum subsp. landra
EY924810       <-- AGTGGAATAGATTTGAGCTTC-A-AT--GTAGGTTAAAAATATCAGCGAC  Raphanus raphanistrum subsp. landra
EY895361       --> AGTGGAATAAATTTGAGCTTC-A-AT--GTAGGTTAAAAATATCAGCGAC  Raphanus raphanistrum subsp. maritimus
EY943922       --> AGTGAAATAGATTTGAGCTTC-A-AT--GTAGGTTAAAAATATCAGCGAC  Raphanus sativus cv Rat-Tail Radish #3870
FD977232       --> AATGGAATATATTTGAGCTTC-A-AT--GTAGGTTAAAAATATCAGCGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD959369       --> AGTGGAATATATTTGAGCTTC-A-AT--GTAGGTTAAAAATATCAGCGAC  Raphanus raphanistrum subsp. maritimus
EW727746       --> AGTGGAATATAATTGAGCTTC-A-AT--GTAGGTTAAAAATATCAGCGAC  Raphanus sativus cv Early Scarlet Globe
EX901551       --> AGTGGAATAGATTTGAGCTTC-A-AT--GTAGGTTAAAAATATCAGCGAC  Raphanus sativus cv Early Scarlet Globe
EY893260       --> AGTGGAATAAATTTGAGCTTC-A-AT--GTAGGTTAAAAATATCAGCGAC  Raphanus raphanistrum subsp. maritimus
EY893307       --> AGTGGAATATATTTGAGCTTC-A-AT--GTAGGTTAAAAATATCAGCGAC  Raphanus raphanistrum subsp. maritimus
FD974581       --> AGTGGAATAGATTTGAGCTTC-A-AT--GTAGGTTAAAAATATCAGCGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD545063       --> AATGGAATATATCTGAGCTTC-A-AT--GTAGGTTAAAAATATCAGCGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW739691       --> AGTGGAATAAATTTGAGCTTC-A-AT--GTAGGTTAAAAATATCAGCGAC  Raphanus sativus cv Rat-Tail Radish #3870
EX769152       --> AGTGGAATAGATTTGAGCTTC-A-AT--GTAGGTTAAAAATATCAGCGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV542137       --> AATGGAATAGATTTGAGCTTC-A-AT--GTGGGTTAAAAATATCAGCGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY920105       --> AGTGGAATAGATTTGAGCTTC-A-AT--GTAGGTTAAAAATATCAGCGAC  Raphanus raphanistrum subsp. landra
EY920416       --> AGTGGAATAGATTTGAGCTTC-A-AT--GTAGGTTAAAAATATCAGCGAC  Raphanus raphanistrum subsp. landra
EW728012       --> AGTGGAATAGATTTGAGCTTC-A-AT--GTAGGTTAAAAATATCAGCGAC  Raphanus sativus cv Early Scarlet Globe
EX752249       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV532503       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               201    -    251
UN16356        --> GGCATTTATAATAGCATCTGCATTGAAAATCTCCTTTGCCTATGGGTAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940379       <-- GGCATTTATAATAGCATCTGCAATGAAAATCTCCTTTGCCTATGGGTAGG
FD938236       <-- GGCATTTATAATAGCATCTGCAATGAAAATCTCCTTTGCCTATGGGTAGG
EX758128       <-- GGCATTTATAATAGCATCTGCATTGAAAATCTCCTTTGCCTATGGGTAGG
EY899635       <-- GGCATTTATAATAGCATCTGCATTGAAAATCTCCTTTGCC--TGGGTAGG
FD535865       <-- GGCATTTATAATAGCATCTGCATTGAAAATCTCCTTTGCCTATGGGTAGG
EV528546       <-- GGCATTTATAATAGCATCTGCATTGAAAATCTCCTTTGCCTATGGGTAGG
EV538923       <-- GGCATTTATAATAGCATCTGCATTGAAAATCTCCTTTGCCTATGGGTAGG
EX763949       <-- GGCATTTATAATAGCATCTGCATTGAAAATCTCCTTTGCCTATGGGTAGG
EX766136       <-- GGCATTTATAATAGCATCTGCATTGAAAATCTCCTTTGCCTATGGGTAGG
EX897371       <-- GGCATTTATAATAGCATCTGCATTGAAAATCTCCTTTGCCTATGGGTAGG
EY900355       <-- GGCATTTATAATAGCATCTGCATTGAAAATCTCCTTTGCCTATGGGTAGG
EY948170       <-- GGCATTTATAATAGCATCTGCATTGAAAATCTCCTTTGCCTATGGGTAGG
FD535441       <-- GGCATTTATAATAGCATCTGCATTGAAAATCTCCTTTGCCTATGGGTAGG
FD978308       <-- GGCATTTATAATAGCATCTGCATTGAAAATCTCCTTTGCCTATGGGTAGG
FD981478       <-- GGCATTTATAATAGCATCTGCATTGAAAATCTCCTTTGCCTATGGGTAGG
EY948573       <-- GGCATTTATAATAGCATCTGCATTGAAAATCTCCTTTGCCTATGGGTAGG
FD962922       <-- GGCATTTATAATAGCATCTGCATTGAAAATCTCCTTTGCCTATGGGTAGG
EV569889       <-- GGCATTTATAATAGCATCTGCATTGAAAATCTCCTTTGCCTATGGGTAGG
EV569895       <-- GGCATTTATAATAGCATCTGCATTGAAAATCTCCTTTGCCTATGGGTAGG
EX897872       <-- GGCATTTATAATAGCATCTGCATTGAAAATCTCCTTTGCCTATGGGTAGG
EY896793       <-- GGCATTTATAATAGCATCTGCATTGAAAATCTCCTTTGCCTATGGGTAGG
EY896857       <-- GGCATTTATAATAGCATCTGCATTGAAAATCTCCTTTGCCTATGGGTAGG
FD561834       <-- GGCATTTATAATAGCATCTGCAATGAAAATCTCCTTTGCCTATGGGTAGG
FD937884       <-- GGCATTTATAATAGCATCTGCAATGAAAATCTCCTTTGCCTATGGGTAGG
FD548945       <-- GGCATTTATAATAGCATCTGCATTGAAAATCTCCTTTGCCTATGGGTAGG
EX748261       <-- GGCATTTATAATAGCATCTGCATTGAAAATCTCCTTTGCCTATGGGTAGG
EW735626       <-- GGCATTTATAATAGCATCTGCATTGAAAATTTCCTTTGCCTATGGGTAGG
EW723950       <-- GGCATTTATAATAGCATCTGCATTGAAAATCTCCTTTGCCTATGGGTAGG
EW733855       <-- GGCATTTATAATAGCATCTGCATTGAAAATCTCCTTTGCCTATGGGTAGG
FD549087       <-- GGCATTTATAATAGCATCTGCATTGAAAATCTCCTTTGCCTATGGGTAGG
EV538037       <-- GGCATTTATAATAGCATCTGCATTGAAAATCTCCTTTGCCTATGGGTAGG
FD986331       <-- GGCATTTATAATAGCATCTGCATTGAAAATCTCCTTTGCCTATGGGTAGG
EY924459       <-- GGCATTTATAATAGCATCTGCATTGAAAATCTCCTTTGCCTATGGGTAGG
EY924810       <-- GGCATTTATAATAGCATCTGCATTGAAAATCTCCTTTGCCTATGGGTAGG
EY895361       --> GGCATTTATAATAGCATCTGCATTGAAAATCTCCTTTGCCT--GGGTAGG
EY943922       --> GGCATTTATAATAGCATCTGCATTGAAAATCTCCTTTGCCTATGGGTAGG
FD977232       --> GGCATTTATAATAGCATCTGCATTGAAAATCTCCTTTGCCTATGGGTAGG
FD959369       --> GGCATTTATAATAGCATCTGCATTGAAAATCTCCTTTGCCTATGGGTAGG
EW727746       --> GGCATTTATAATAGCATCTGCATTGAAAATCTCCTTTGCCTATGGGTAGG
EX901551       --> GGCATTTATAATAGCATCTGCATTGAAAATCTCCTTTGCCTATGGGTAGG
EY893260       --> GGCATTTATAATAACATCTGCATTGAAAATCTCCTTTGCCTATGGGTAGG
EY893307       --> GGCATTTATAATAGCATCTGCATTGAAAATCTCCTTTGCCTATGGGTAGG
FD974581       --> GGCATTTATAATAGCATCTGCATTGAAAATCTCCTTTGCCTATGGGTAGG
FD545063       --> GGCATTTATAATAGCATCTGCATTGAAAATCTCCTTTGCCTATGGGTAGG
EW739691       --> GGCATTTATAATAGCATCTGCATTGAAAATCTCCTTTGCCTATGGGTAGG
EX769152       --> GGCATTTATAATAGCATCTGCATTGAAAATCTCCTTTGCCTATGGGTAGG
EV542137       --> GGCATTTATAATAGCATCTGCATTGAAAATCTCCTTTGCCTATGGGTAGG
EY920105       --> GGCATTTATAATAGCATCTGCATTGAAAATCTCCTTTGCCTATGGGTAGG
EY920416       --> GGCATTTATAATAGCATCTGCATTGAAAATCTCCTTTGCCTATGGGTAGG
EW728012       --> GGCATTTATAATAGCATCTGCATTGAAAATCTCCTTTGCCTATGGGTAGG
EX752249       --> ........TAATAGCATCTGCATTGAAAATCTCCTTTGCCTATGGGTAGG
EV532503       --> .................CTGCATTGAAAATCTCCTTTGCCTATGGGTAGG

               251    -    301
UN16356        --> CACATACCAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTCACATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940379       <-- CACATACCAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTCACATTG
FD938236       <-- CACATACCAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTCACATTG
EX758128       <-- CACCTACCAACTCCTTTTGGCCTCTTTTTGGTACATTCGGCTTCACATTG
EY899635       <-- CACATACCAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTCACATTG
FD535865       <-- CACATACCAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTCACATTG
EV528546       <-- CACATACCAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTCACATTG
EV538923       <-- CACCTACCATCCCCTTTTGTCCTCTTTTTGGTACATTCGGCTTCACATTG
EX763949       <-- CACATACCAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTCACATTG
EX766136       <-- CACATACCAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTCACATTG
EX897371       <-- CACATACCAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTCACATTG
EY900355       <-- CACATACCAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTCACATTG
EY948170       <-- CACATACCAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTCACATTG
FD535441       <-- CACATACCAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTCACATTG
FD978308       <-- CACATACCAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTCACATTG
FD981478       <-- CACATACCAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTCACATTG
EY948573       <-- CACATACCAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTCACATTG
FD962922       <-- CACATACCAACCCCTTTTGGCCTCTGTTTGGTACATTCGGCTTTACATTG
EV569889       <-- CACATAACAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTCACATTG
EV569895       <-- CACATAACAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTCACATTG
EX897872       <-- CACATACCAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTCACATTG
EY896793       <-- CACATACCAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTCACATTG
EY896857       <-- CACATACCAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTTACATTG
FD561834       <-- CACATACCAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTCACATTG
FD937884       <-- CACATACCAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTCACATTG
FD548945       <-- CACATACCAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTCACATTG
EX748261       <-- CACATACCAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTTACATTG
EW735626       <-- CACATACCAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTCACATTG
EW723950       <-- CACATACCAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTCACATTG
EW733855       <-- CACATACCAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTCACATTG
FD549087       <-- CACATACCAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTCACATTG
EV538037       <-- CACCTACCATCCCCTTTTGTCCTCTTTTTGGTACATTCGGCTTCACATTG
FD986331       <-- CACATACCAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTCACATTG
EY924459       <-- CACATACCAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTCACATTG
EY924810       <-- CACATACC..........................................
EY895361       --> CACATACCAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTCACATTG
EY943922       --> CACATACCAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTCACATTG
FD977232       --> CACATACCAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTCACATTG
FD959369       --> CACATACCAACCCCTTTTGGCCTCTGTTTGGTACATTCGGCTTTACATTG
EW727746       --> CACATACCAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTCACATTG
EX901551       --> CACATACCAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTCACATTG
EY893260       --> CACATACCAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTCACATTG
EY893307       --> CACATACCAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTTACATTG
FD974581       --> CACATACCAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTCACATTG
FD545063       --> CACATACCAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTCACATTG
EW739691       --> CACATACCAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTCACATTG
EX769152       --> CACATACCAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTCACATTG
EV542137       --> CACCTACCATCCCCTTTTGTCCTCTTTTTGGTACATTCGGCTTCACATTG
EY920105       --> CACATACCAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTCACATTG
EY920416       --> CACATACCAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTCACATTG
EW728012       --> CACATACCAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTCACATTG
EX752249       --> CACATACCAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTTACATTG
EV532503       --> CACATACCAACCCCTTTTGGCCTCTTTTTGGTACATTCGGCTTCACATTG

               301    -    351
UN16356        --> CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940379       <-- CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCATTACAAGTTC
FD938236       <-- CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCATTAAAAGTTC
EX758128       <-- CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAGTTC
EY899635       <-- CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAGTTC
FD535865       <-- CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAGTTC
EV528546       <-- CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAGTTC
EV538923       <-- CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAGTTC
EX763949       <-- CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAGTTC
EX766136       <-- CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAGTTC
EX897371       <-- CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAGTTC
EY900355       <-- CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAGTTC
EY948170       <-- CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAGTTC
FD535441       <-- CTTATTATCACATTTTCCAGTATCGTTTGGGTATGCTTCAGTACAAGTTC
FD978308       <-- CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAGTTC
FD981478       <-- CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAGTTC
EY948573       <-- CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAGTTC
FD962922       <-- CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAGTTC
EV569889       <-- CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAGTTC
EV569895       <-- CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAGTTC
EX897872       <-- CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAGTTC
EY896793       <-- CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAGTTC
EY896857       <-- CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAGTTC
FD561834       <-- CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCATTACAAGTTC
FD937884       <-- CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCATTACAAGTTC
FD548945       <-- CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAGTTC
EX748261       <-- CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAATTC
EW735626       <-- CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGATTCAGTACAAGTTC
EW723950       <-- CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAGTTC
EW733855       <-- CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAGTTC
FD549087       <-- CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAGTTC
EV538037       <-- CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAGTTC
FD986331       <-- CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAGTTC
EY924459       <-- CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAGTTC
EY924810       <-- ..................................................
EY895361       --> CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAGTTC
EY943922       --> CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAGTTC
FD977232       --> CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAGTTC
FD959369       --> CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAGTTC
EW727746       --> CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAGTTC
EX901551       --> CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAGTTC
EY893260       --> CTTACTATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAGTTC
EY893307       --> CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAGTTC
FD974581       --> CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAGTTC
FD545063       --> CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAGTTC
EW739691       --> CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAGTTC
EX769152       --> CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAGTTC
EV542137       --> CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAGTTC
EY920105       --> CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAGTTC
EY920416       --> CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAGTTC
EW728012       --> CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAGTTC
EX752249       --> CTTAGTATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAATTC
EV532503       --> CTTAATATCACATTTTCCAGTATTGTTTGGGTATGCTTCAGTACAAGTTC

               351    -    401
UN16356        --> TTTCTGTGCTTGGTCCTCCCTTCTGAGCAGACACCACTACTCCTAGTAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940379       <-- TTTCTGTGCTTGGTCCTCCCTTCTGAGCAGACACCACTACTCCTAGTAGA  Raphanus sativus var. oleiformis
FD938236       <-- TTTCTGTGCTTGGTCCTCCCTTCTGAGCAGACACCACTACTCCTAGTAGA  Raphanus sativus var. oleiformis
EX758128       <-- TTTCTGTGCTTGGTCCTCCCTTTTGAACAGACACCACTACTCCTAGTAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899635       <-- TTTCTGTGCTTGGTCCTCCCTTCTGAGCAGACACCACTACTCCTAGTAGA  Raphanus raphanistrum subsp. maritimus
FD535865       <-- TTTCTGTGCTTGGTCCTCCCTTCTGAGCAGACACCACTACTCCTAGTAGA  Raphanus raphanistrum subsp. maritimus
EV528546       <-- TTTCTGTGCTTGGTCCTCCCTTCTGAGCAGACACCACTACTCCTAGTAGA  Raphanus raphanistrum subsp. maritimus
EV538923       <-- TTTCTGTGCTTGGTCCTCCCTTTTGAGCAGACACCACTACTCCTAGTAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763949       <-- TTTCTGTGCTTGGTCCTCCCTTCTGAG.......................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX766136       <-- TTTCTGTGCTTGGTCCTCCCTTCTGAGCAGACACCACTACTCCTAGTAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897371       <-- TTTCTGTGCTTGGTCCTCCCTTCTGAGCAGACACCACTACTCCTAGTAGT  Raphanus sativus cv Early Scarlet Globe
EY900355       <-- TTTCTGTGCTTGGTCCTCCCTTCTGAGCAGACACCACTACTCCTAGTAGA  Raphanus raphanistrum subsp. maritimus
EY948170       <-- TTTCTGTGCTTGGTCCTCCCTTCTGAGCAGACACCACTACTCCTAGTAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD535441       <-- TTTCTGTGCTTGGTCCTCCCTTCTGAGCAGACACCACTACTCCTAGTAGA  Raphanus raphanistrum subsp. maritimus
FD978308       <-- TTTCTGTGCTTGGTCCTCCCTTCTGAGCAGACACCACTACTCCTAGTAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981478       <-- TTTCTGTGCTTGGTCCTCCCTACTGAGCAGACACCACTACTCCTAGTAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY948573       <-- TTTCTGTGCTTGGTCCTCCCTTCTGAGCAGACACCACTACTCCTAGTAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD962922       <-- TTTCTGTGCTTGGTCCTCCCTTCTGAGCAG....................  Raphanus raphanistrum subsp. maritimus
EV569889       <-- TTTCTGTGCTTGGTCCTCCCTTCTGAGCAGACACCACTACTCCTAGTAGT  Raphanus raphanistrum subsp. landra
EV569895       <-- TTTCTGTGCTTGGTCCTCCCTTCTGAGCAGACACCACTACTCCTAGTAGT  Raphanus raphanistrum subsp. landra
EX897872       <-- TTTCTGTGCTTGGTCCTCCCTTCTGAGCAGACACCACTACTCCTAGTAGA  Raphanus sativus cv Early Scarlet Globe
EY896793       <-- TTTCTGTGCTTGGTCCTCCCTTCTGAGCAGACACCACTACTCCTAGTAGA  Raphanus raphanistrum subsp. maritimus
EY896857       <-- TTTCTGTGCTTGGTCCTCCCTTCTGAGCAGACACCACTACTCCTAGTAGA  Raphanus raphanistrum subsp. maritimus
FD561834       <-- TTTCTGTGCTTGGTCCTCCCTTCTGAGCAGACACCACTACTCCTAGTAGA  Raphanus sativus var. oleiformis
FD937884       <-- TTTCTGTGCTTGGTCCTCCCTTCTGAGCAGACACCACTACTCCTAGTAGA  Raphanus sativus var. oleiformis
FD548945       <-- TTTCTGTGCTTGGTCCTCCCTTCTGAGCAGACACCACTACTCCTAGTAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX748261       <-- TTTCTGTGCTTGGTCCTCCCTTCTGAGCAGACACCACTACTCCTAGTAGA  Raphanus raphanistrum subsp. maritimus
EW735626       <-- TTTCTGTGCTTGGTCCTCCCTTCTGAGCAGACACCACTACTCCTAGTAGA  Raphanus sativus cv Rat-Tail Radish #3870
EW723950       <-- TTTCTGTGCTTGGTCCTCCCTTCTGAGCAGACACCACTACTCCTAGTAGC  Raphanus sativus cv Early Scarlet Globe
EW733855       <-- TTTCTGTGCTTGGTCCTCCCTTCTGAGCAGACACCACTACTCCTA.....  Raphanus sativus cv Rat-Tail Radish #3870
FD549087       <-- TTTCTGTGCTTGGTCCTCCCTTCTGAGCAGACACCACTACTCCTAGTAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV538037       <-- TTTCTGTGCTTGGTCCTCCCTTTTGAGCAGACACCACTACTCCTAGTAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD986331       <-- CTTCTGTGCTTGGTCCTCCCTTCTGAGCAGACACCACTACTCCTAGTAGT  Raphanus raphanistrum subsp. landra
EY924459       <-- TTTCTGTGCTTGGTCCTCCCTTCTGAGCAGACACCACTACTCCTAGTAGT  Raphanus raphanistrum subsp. landra
EY924810       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY895361       --> TTTCTGTGCTTGGTCCTCCCTTCTGAGCAAACACCACTACTCCTAGTAAA  Raphanus raphanistrum subsp. maritimus
EY943922       --> TTTCTGTGCTTGGTCCTCCCTTCTGAGCAGACACCACTACTCCTAGTAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD977232       --> TTTCTGTGCTTGGTCCTCCCTACTGAGCAGACACCACTACTCCTAGTAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD959369       --> TTTCTGTGCTTGGTCCTCCCTTCTGAGCAGACACCACTACTCCTAGTAGA  Raphanus raphanistrum subsp. maritimus
EW727746       --> TTTCTGTGCTTGGTCCTCCCTTCTGAGCAGACACCACTACTCCTAGTAGA  Raphanus sativus cv Early Scarlet Globe
EX901551       --> TTTCTGTGCTTGGTCCTCCCTTCTGAGCAGACACCACTACTCCTAGTAAA  Raphanus sativus cv Early Scarlet Globe
EY893260       --> TTTCTGTGCTTGGTCCTCCCTTCTGAGCAGACACCACTACTCCTAGTAAA  Raphanus raphanistrum subsp. maritimus
EY893307       --> TTTCTGTGCTTGGTCCTCCCTTCTGAGCAGACACCACTACTCCTAGTAGA  Raphanus raphanistrum subsp. maritimus
FD974581       --> TTTCTGTGCTTGGTCCTCCCTTCTGAGCAGACACCACTACTCCTAGTAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD545063       --> TTTCTGTGCTTGGTCCTCCCTTCTGAGCAGACACCACTACTCCTAGTAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW739691       --> TTTCTGTGCTTGGTCCTCCCTTCTGAGCAGACACCACTACTCCTAGTAGA  Raphanus sativus cv Rat-Tail Radish #3870
EX769152       --> TTTCTGTGCTTGGTCCTCCCTTCTGAGCAGACACCACTACTCCTAGTAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV542137       --> TTTCTGTGCTTGGTCCTCCCTTTTGAGCAGACACCACTACTCCTAGTAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY920105       --> TTTCTGTGCTTGGTCCTCCCTTCTGAGCAGACACCACTACTCCTAGTAGT  Raphanus raphanistrum subsp. landra
EY920416       --> TTTCTGTGCTTGGTCCTCCCTTCTGAGCAGACACCACTACTCCTAGTAGT  Raphanus raphanistrum subsp. landra
EW728012       --> TTTCTGTGCTTGGTCCTCCCTTCTGAGCAGACACCACTACTCCTAGTAGC  Raphanus sativus cv Early Scarlet Globe
EX752249       --> TTTCTGTGCTTGGTCCTCCCTTCTGAGCAGACACCACTACTCCTAGTAGA  Raphanus raphanistrum subsp. maritimus
EV532503       --> TTTCTGTGCTTGGTCCTCCCTTCTGAACAAACACCACTACTCCTAGTAAA  Raphanus raphanistrum subsp. maritimus

               401    -    451
UN16356        --> AAGATTGTGACCAAAATGAAGCCAATAAGCGAAGTTTGAAAAGATATTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940379       <-- AAGATTGTGACCAAAATGAAGCCAATAAGCGAAGTTTGAAAAGATATTTT
FD938236       <-- AAGATTGTGACCAAAATGAAGCCAATAAGCGAAGTTTGAAAAGATATTTT
EX758128       <-- AAGATTGTGACCAAAATGAAGCCAATAAGCGAAGTTTAAAAAGATATTTT
EY899635       <-- AAGATTGTGACCAAAATGAAGCCAATAAGCGAAGTTTGAAAAGATATTTT
FD535865       <-- AAGATTGTGACCAAAATGAAGCCAATAAGCGAAGTTTGAAAAGATATTTT
EV528546       <-- AAGATTGTGACCAAAATGAAGCCAATAAGCGAAGTTTGAAAAGATATTTT
EV538923       <-- AAGATTGTGACCAAAATGAAGCCAATAAGCGAAGTTTGAAAAGATATTTT
EX763949       <-- ..................................................
EX766136       <-- AAGATTGTGACCAAAATGAAGCCAATAAGCGAAGTTTGAAAAGATATTTT
EX897371       <-- AAGATTGTGACCAAAATGAAGCCAATAAGCGAAGTTTGAAAAGATATTTT
EY900355       <-- AAGATTGTGACCAAAATGAAGCCAATAAGCGAAGTTTGAAAAGATATTTT
EY948170       <-- AAGATTGTGACCAAAATGAAGCCAATAAGCGAAGTTTGAAAAGATATTTT
FD535441       <-- AAGATTGTGACCAAAATGAAGCCAATAAGCGAAGTTTGAAAAGATATTTT
FD978308       <-- AAGATTGTGACCAAAATGAAGCCAATAAGCGAAGTTTGAAAAGATATTTT
FD981478       <-- AAAATTGTGACCAAAATGAAGCCAATAAGCGAAGTTTGAAAAGATATTTT
EY948573       <-- AAGATTGTGACCAAAATGAAGCCAATAAGCGAAGTTTGAAAAGATATTTT
FD962922       <-- ..................................................
EV569889       <-- AAGATTGTGACCAAAATGAAGCCAATAAGCGAAGTTTGAAAAGATATTTT
EV569895       <-- AAGATTGTGACCAAAATGAAGCCAATAAGCGAAGTTTGAAAAGATATTTT
EX897872       <-- AAGATTGTGACCAAAATGAAGCCAATAAGCGAAGTTTGAAAAGATATTTT
EY896793       <-- AAGATTGTGACCAAAATGAAGCCAATAAGCGAAGTTTGAAAAGATATTTT
EY896857       <-- AAGATTGTGACCAAAGTGAAGCCAATAAGCGAAGTTTGAAAAGATATTTT
FD561834       <-- AAGATTGTGGCCAAAATGAAGCCAATAAGCGAAGTTTGAAAAGATATTTT
FD937884       <-- AAGATTGTGACCAAAATGAAGCCAATAAGCGAAGTTTGAAAAGATATTTT
FD548945       <-- AAAATTGTGACCAAAATGAAGCCAATAAGCGAAGTTTGAAAAGATATTTT
EX748261       <-- AAGATTGTGACCAAAGTGAAGCCAATAAGCGAAGTTTGAAAAGATAT...
EW735626       <-- AAGATTGTGACCAAAATGAAGCCAATAAGCGAAGTTTGAAAAGATATTTT
EW723950       <-- AAGATTGTGACCAAAATGAAGCCAATAAGCGAAGTTTGAAAAGATATTTT
EW733855       <-- ..................................................
FD549087       <-- AAGATTGTGACCAAAATGAAGCCAATAAGCGAAGTTTGAAAAGATATTTT
EV538037       <-- AAGATTGTGACCAAAATGAAGCCAATAAGCGAAGTTTGAAAAGATATTTT
FD986331       <-- AAGATTGTGACCAAAATGAAGCCAATAAGCGAAGTTTGAAAAGATATTTT
EY924459       <-- AAGATTGTGACCAAAATGAAGCCAATAAGCGAAGTTTGAAAAGATATTTT
EY924810       <-- ..................................................
EY895361       --> AAGATTGTGACCAAAATGAAGCCAATAAGCGAAGTTTGAAAAGATATTTT
EY943922       --> AAGATTGTGACCAAAATGAAGCCAATAAGCGAAGTTTGAAAAGATATTTT
FD977232       --> AAAATTGTGACCAAAATGAAGCCAATAAGCGAAGTTTGAAAAGATATTTT
FD959369       --> AAGATTGTGACCAAAGTGAAGCCAATAAGCGAAGTTTGAAAAGATATTTT
EW727746       --> AAGATTGTGACCAAAATGAAGCCAATAAGCGAAGTTTGAAAAGATATTTT
EX901551       --> AAGATTGTGACCAAAATGAAGCCAATAAGCGAAGTTTGAAAAGATATTTT
EY893260       --> AAGATTGTGACCAAAATGAAGCCAATAAGCGAAGTTTGAAAAGATATTTT
EY893307       --> AAGATTGTGACCAAAGTGAAGCCAATAAGCGAAGTTTGAAAAGATATTTT
FD974581       --> AAGATTGTGACCAAAATGAAGCCAATAAGCGAAGTTTGAAAAGATATTTT
FD545063       --> AAAATTGTGACCAAAATGAAGCCAATAAGCGAAGTTTGAAAAGATATTTT
EW739691       --> AAGATTGTGACCAAAATGAAGCCAATAAGCGAAGTTTGAAAAGATATTTT
EX769152       --> AAGATTGTGACCAAAATGAAGCCAATAAGCGAAGTTTGAAA-GATATTTT
EV542137       --> AAGATTGTGACCAAAATGAAGCCAATAAGCGAAGTTTGAAAAGATATTTT
EY920105       --> AAGATTGTGACCAAAATGAAGCCAATAAGCGAAGTTTGAAAAGATATTTT
EY920416       --> AAGATTGTGACCAAAATGAAGCCAATAAGCGAAGTTTGAAAAGATATTTT
EW728012       --> AAGATTGTGACCAAAATGAAGCCAATAAGCGAAGTTTGAAAAGATATTTT
EX752249       --> AAGATTGTGACCAAAGTGAAGCCAATAAGCGAAGTTTGAAAAGATAT...
EV532503       --> AAAATTGTGACCAAAATGAAGCCAATAAGCGAAGTTTG............

               451    -    501
UN16356        --> CATCTTAAATAATGAACTAATTGTGTTTTCCCCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940379       <-- CATCTTAAATAATGAACTAATTGTGTTTTCC....
FD938236       <-- CATCTTAAATAATGAACTAATTGTGTcc.......
EX758128       <-- CATCTTAAATAATGAACTAATTGTcc.........
EY899635       <-- CATCTTAAATAATGAACTAATTcc...........
FD535865       <-- CATCTTAAATAATGAACTAATTGTGTTTTCC....
EV528546       <-- CATCTTAAATcc.......................
EV538923       <-- CATCTTAAATAATGAACTAATTGTGTTTcc.....
EX763949       <-- ...................................
EX766136       <-- CATCTTAAATAATGAACTAATTGTcc.........
EX897371       <-- CATCTTAAATAATGAACTAATTGTcc.........
EY900355       <-- CATCTTAAATcc.......................
EY948170       <-- CATCTTAAATAATGAAC..................
FD535441       <-- CATCTTAAATAATGAACTAATTGCGTTTTCC....
FD978308       <-- CATCTTAGATAATGAACTAATTGTGTTTTCC....
FD981478       <-- CATCTTAAATAATGAACTAATTGTGTTTTC.....
EY948573       <-- CATCTTAAATAATGAACTAATTTTGTTTTCCCCt.
FD962922       <-- ...................................
EV569889       <-- CATCTTAAATcc.......................
EV569895       <-- CATCTTAAATcc.......................
EX897872       <-- CATCTTAGATAATGAACTAATTGTGTTTTCCC...
EY896793       <-- CATCTTAAATAATGAACTAATTGTcc.........
EY896857       <-- CATCTTGAATAATGAACTAATTGTATTTTCC....
FD561834       <-- CATCTTAAATAATGAACTAATTcc...........
FD937884       <-- CATCTTAAATAATGAACTAATTGTGTTCTCC....
FD548945       <-- CATCTTAAATAATGAACTAATTGTGTTTTCC....
EX748261       <-- ...................................
EW735626       <-- CATCTTAAATAATGAACTcc...............
EW723950       <-- CATCTTAAATAATGAACTcc...............
EW733855       <-- ...................................
FD549087       <-- CATCTTAAATAATGAACTAATTGTGTTTTCC....
EV538037       <-- CATCTTAAATAATGAACTAATTGTGTTTTCC....
FD986331       <-- CATCTTAAATAATGAACTAATTGTcc.........
EY924459       <-- CATCTTAAATAATGAACTAATTGTGTTTTC.....
EY924810       <-- ...................................
EY895361       --> CATCTTAAATAATGAACTAATTcc...........
EY943922       --> CATCTTAAATAATGAAC..................
FD977232       --> CATCTTAAATAATGAACTAATTGTGTTTTC.....
FD959369       --> CATCTTGAATAATGAACTAATTGTATTTTCC....
EW727746       --> CATCTTAAATAATGAACTAATTGTGTTTTCCCCCT
EX901551       --> CATCTTAAATAATGAACTAATTGTGTTTTCCC...
EY893260       --> CATCTTAAATAATGAACTAATTGTcc.........
EY893307       --> CATCTTGAATAATGAACTAATTGTATTTTCC....
FD974581       --> CATCTTAGATAATGAACTAATTGTGTTTTCC....
FD545063       --> CATCTTAAATAATGAACTAATTGTGTTTTCC....
EW739691       --> CATCTTAAATAATGAACTcc...............
EX769152       --> CATCTTAAATAATGAACTAATTGTcc.........
EV542137       --> CATCTTAAATAATGAACTAATTGTGTTTTCC....
EY920105       --> CATCTTAAATAATGAACTAATTGTGTTTTC.....
EY920416       --> CATCTTAAATAATGAACTAATTGTGTTTTC.....
EW728012       --> CATCTTAAATAATGAACTcc...............
EX752249       --> ...................................
EV532503       --> ...................................