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Alignment for radish unigene UN16361

               1      -     51
UN16361        --> CCTCATAATTCCTTTTTTATCACACTCCCACTAAAAAACATAGTTTTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX895143       <-- ..................................................
FD577791       <-- ..................................................
EV526067       <-- ..................................................
FD568359       <-- ..................................................
EV551911       <-- ..................................................
EV568219       <-- ..................................................
EV566419       <-- ..................................................
EX897101       <-- ..................................................
EX746855       <-- ..................................................
EY948591       <-- ..................................................
EX903546       <-- ..................................................
FD563490       <-- ..................................................
FD570909       <-- ..................................................
FD562616       <-- ..................................................
FD532374       <-- ..................................................
FD574839       --> CCTCATAATTCCTTTTTTATCACACTCCCACTAAAAAACATAGTTTTTTT
EV572677       --> ...............................cctcataattccTTTTTTA
EX900921       --> ..................................................
FD528869       --> ..................................................
FD567118       --> ..................................................
FD572715       --> ..................................................
EX907587       --> .................................................c
EY944265       --> ...............................................ggc
EX751171       --> ..................................................
EV546928       --> ..................................................
EV571555       --> ..................................................
EV530640       --> ..................................................

               51     -    101
UN16361        --> TGACA-TCCCACTAAAAACATAGTTTAAAATCAACGAATACAAGTTGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX895143       <-- ..........................AAAATCAACGAATACAAGTTGGAA  Raphanus sativus cv Early Scarlet Globe
FD577791       <-- ............................AATCAACGAATACAAGT-GGAA  Raphanus sativus cv Rat-Tail Radish #3870
EV526067       <-- ....................................agTACAAGTCGGAA  Raphanus raphanistrum subsp. maritimus
FD568359       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV551911       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV568219       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV566419       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX897101       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX746855       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY948591       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX903546       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD563490       <-- ..................................................  Raphanus sativus var. oleiformis
FD570909       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD562616       <-- ..................................................  Raphanus sativus var. oleiformis
FD532374       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD574839       --> TGACA-TCCCACTAAAAACATAGTTTAAAATCAACGAATACAAGTTGGAA  Raphanus sativus cv Early Scarlet Globe
EV572677       --> TCACACTCCCACTAAAAACATAGTTTAAAATCAACGAATACAAGT-GGAA  Raphanus raphanistrum subsp. landra
EX900921       --> .GACA-TCCCACTAAAAACATAGTTTAAAATCAACGAATACAAGTTGGAA  Raphanus sativus cv Early Scarlet Globe
FD528869       --> .GACA-TCCCACTAAAAACATAGTTTAAAATCAACGAATACAAGTTGGAA  Raphanus raphanistrum subsp. maritimus
FD567118       --> .GACA-TCCCACTAAAAACATAGTTTAAAATCAACGAATACAAGTTGGAA  Raphanus sativus var. oleiformis
FD572715       --> .GACA-TCCCACTAAAAACATAGTTTAAAATCAACGAATACAAGTTGGAA  Raphanus sativus cv Early Scarlet Globe
EX907587       --> tcacacTCCCACTAAAAACATAGTTTAAAATCAACGAATACAAGT-GGAA  Raphanus sativus cv Rat-Tail Radish #3870
EY944265       --> acacacTCCCACTAAAAACATAGTTTAAAATCAACGAATACAAGTTGGAA  Raphanus sativus cv Rat-Tail Radish #3870
EX751171       --> .......CCCACTAAAAACATAGTTTAAAATCAACGAATACAAGT-GGAA  Raphanus raphanistrum subsp. maritimus
EV546928       --> .....................AGTTTAAAATCAACGAATACAAGT-GGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571555       --> ..........................AAAATCAACGAATACAAGT-GGAA  Raphanus raphanistrum subsp. landra
EV530640       --> ....................................agTACAAGTCGGAA  Raphanus raphanistrum subsp. maritimus

               101    -    151
UN16361        --> TCGAACATATACAGAGTAAAATGCATACATATATGT-ATATCTCAAAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX895143       <-- TCGAACATATACAGAGTAAAATGCATACATATATGT-ATATCTCAAAAGA
FD577791       <-- TCGAACATATACAGAGTAAAATGCATACATATATGT-ATATCTCAAAAGA
EV526067       <-- TCGAACATATACAGAGTAAAATGCATACATATATGT-ATATCTCAAAAGA
FD568359       <-- ..................................................
EV551911       <-- ..................................................
EV568219       <-- ..................................................
EV566419       <-- ..................................................
EX897101       <-- ..................................................
EX746855       <-- ..................................................
EY948591       <-- ..................................................
EX903546       <-- ..................................................
FD563490       <-- ..................................................
FD570909       <-- ..................................................
FD562616       <-- ..................................................
FD532374       <-- ..................................................
FD574839       --> TCGAACATATACAGAGTAAAATGCATACATATATGT-ATATCTCAAAAAA
EV572677       --> TCGAACATATACAGAGTAAAATGCATACATATATGT-ATATCTCAAAAGA
EX900921       --> TCGAACATATACAGAGTAAAATGCATACATATATGT-ATATCTCAAAAGA
FD528869       --> TCGAACATATACAGAGTAAAATGCATACATATATGT-ATATCTCAAAAGA
FD567118       --> TCGAACATATACAGAGTAAAATGCATACATATATGT-ATATCTCAAAAGA
FD572715       --> TCGAACATATACAGAGTAAAATGCATACATATATGT-ATATCTCAAAAGA
EX907587       --> TCGAACATATACAGAGTAAAATGCATACATATATGT-ATATCTCAAAAGA
EY944265       --> TCGAACATATACAGAGTAAAATGCATACATATATGTTATATCTCAAAAGA
EX751171       --> TCGAACATATACAGAGTAAAATGCATACATATATGT-ATATCTCAAAAGA
EV546928       --> TCGAACATATGCAGAGTAAAATGCATACATATATGT-ATATCTCAAAAGA
EV571555       --> TCGAACATATACAGAGTAAAATGCATACATATATGT-ATATCTCAAAAGA
EV530640       --> TCGAACATATACAGAGTAAAATGCATACATATATGT-ATATCTCAAAAGA

               151    -    201
UN16361        --> ACAACCCCGAAAAAGAAAATTTAAAAATTGCTCGTG-TAAGCCTACCCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX895143       <-- ACAACCCCGAAAAAGAAAATTTAAAAATTGCTCGTG-TAAGCCTACCCAG  Raphanus sativus cv Early Scarlet Globe
FD577791       <-- ACAACCCCGAAAAAGAAAATTTAAAAATTGCTCGTGGTAAGC-TACCCAG  Raphanus sativus cv Rat-Tail Radish #3870
EV526067       <-- ACAACCCCGAAAAAGAAAATTTAAAAATTGCTCGTG-TAAGCCTACCCAG  Raphanus raphanistrum subsp. maritimus
FD568359       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV551911       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV568219       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV566419       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX897101       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX746855       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY948591       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX903546       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD563490       <-- ..................................................  Raphanus sativus var. oleiformis
FD570909       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD562616       <-- ..................................................  Raphanus sativus var. oleiformis
FD532374       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD574839       --> ACAACCCCAAAAAAAAAAATTTAAAAATTGCTCGTG-TAAGCCTACCCAA  Raphanus sativus cv Early Scarlet Globe
EV572677       --> ACAACCCCGAAAAAGAAAATTTAAAAATTGCTCGTGGTAAGC-TACCCAG  Raphanus raphanistrum subsp. landra
EX900921       --> ACAACCCCGAAAAAGAAAATTTAAAAATTGCTCGTG-TAAGCCTACCCAG  Raphanus sativus cv Early Scarlet Globe
FD528869       --> ACAACCCCGAAAAAGAAAATTTAAAAATTGCTCGTG-TAAGCCTACCCAG  Raphanus raphanistrum subsp. maritimus
FD567118       --> ACAACCCCGAAAAAGAAAATTTAAAAATTGCTCGTG-TAAGCCTACCCAG  Raphanus sativus var. oleiformis
FD572715       --> ACAACCCCGAAAAAAAAAATTTAAAAATTGCTCGTG-TAAGCCTACCCAG  Raphanus sativus cv Early Scarlet Globe
EX907587       --> ACAACCCCGAAAAAGAAAATTTAAAAATTGCTCGTGGTAAGC-TACCCAG  Raphanus sativus cv Rat-Tail Radish #3870
EY944265       --> ACAACCCCGAAAAAGAAAATTTAAAAATTGCTCGTGGTAAGC-TACCCAG  Raphanus sativus cv Rat-Tail Radish #3870
EX751171       --> ACAACCCCGAAAAAGAAAATTTAAAAATTGCTCGTGGTAAGC-TACCCAG  Raphanus raphanistrum subsp. maritimus
EV546928       --> ACAACCCCGAAAAAGAAAATTTAAAAATCGCTCGTGGTAAGC-TACCCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571555       --> ACAACCCCGAAAAAGAAAATTTAAAAATTGCTCGTGGTAAGC-TACCCAG  Raphanus raphanistrum subsp. landra
EV530640       --> ACAACCCCGAAAAAGAAAATTTAAAAATTGCTCGTG-TAAGCCTACCCAG  Raphanus raphanistrum subsp. maritimus

               201    -    251
UN16361        --> ATTGGGTTCGTATCTAGTAAAAGCCACATGAAATGCTTAGCTGATTATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX895143       <-- ATTGGGTTCGTATCTAGTAAAAGCCACATGAAATGCTTAGCTGATTATGG
FD577791       <-- ATTGGGTTCGTATCTAGTAAAAGCCACATGAAATGCTTAGCTGATTATGG
EV526067       <-- ATTGGGTTCGTATCTAGTAAAAGCCACATGAAATGCTTAGCTGATTATGG
FD568359       <-- ......gTCGTATCTAGTAAA-GCCACATGAAATGCT-AGCTGAT-ATGG
EV551911       <-- ..................................................
EV568219       <-- ..................................................
EV566419       <-- ..................................................
EX897101       <-- ..................................................
EX746855       <-- ..................................................
EY948591       <-- ..................................................
EX903546       <-- ..................................................
FD563490       <-- ..................................................
FD570909       <-- ..................................................
FD562616       <-- ..................................................
FD532374       <-- ..................................................
FD574839       --> ATTGGGTTCGTATCTAGTAAAAGCCACATGAAATGCTTAGCTGATTATGG
EV572677       --> ATTGGGTTCGTATCTAGTAAAAGCCACATGAAATGCTTAGCTGATTATGG
EX900921       --> ATTGGGTTCGTATCTAGTAAAAGCCACATGAAATGCTTAGCTGATTATGG
FD528869       --> ATTGGGTTCGTATCTAGTAAAAGCCACATGAAGTGCTTAGCTGATTATGG
FD567118       --> ATTGGGTTCGTATCTAGTAAAAGCCACATGAAATGTTTAGCTGATTATGG
FD572715       --> ATTGGGTTCGTATCTAGTAAAAGCCACATGAAATGCTTAGCTGATTATGG
EX907587       --> ATTGGGTTCGTATCTAGTAAAAGCCGCATGAAATGCTTAGCTGATTATGG
EY944265       --> ATTGGGTTCTTATCCAGTAAAAGCCACATGAAATGCTTAGCTGATTATGG
EX751171       --> ATTGGGTTCGTATCTAGTAAAAGCCACATGAAATGCTTAGCTGATTATGG
EV546928       --> ATTGGGTTCGTATCTAGTAAAAGCCACATGAAATGCTTAGCTGATTATGG
EV571555       --> ATTGGGTTCGTATCTAGTAAAGGCCACATGAAATGCTTAGCTGATTATGG
EV530640       --> ATTGGGTTCGTATCTAGTAAAAGCCACATGAAATGCTTAGCTGATTATGG

               251    -    301
UN16361        --> TTGACTTGTGCGTATCACACAAGGCAC--CACATCTAATCTTCTGGTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX895143       <-- TTGACTTGTGCGTATCACACAAGGCAC--CACATCTAATCc.........
FD577791       <-- TTGACTTGTGCGTATCACACAAGGCAC--CACATCTAATCTTCTGGTCTC
EV526067       <-- TTGACTTGTGCGTATCACACAAGGCAC--CACATCTAATCTTCCGGTCTC
FD568359       <-- T-GAC-TGTGCGTATCACACAAGGCAC--CACATCTA-TC-TCT-GTCTC
EV551911       <-- ..................................................
EV568219       <-- ..................................................
EV566419       <-- ..................................................
EX897101       <-- ..................................................
EX746855       <-- ..................................................
EY948591       <-- ..................................................
EX903546       <-- ..................................................
FD563490       <-- ..................................................
FD570909       <-- ..................................................
FD562616       <-- ..................................................
FD532374       <-- ..................................................
FD574839       --> TTGACTTGTGCGTATCACACAAGGCAC--CACATCTAATCTTCTGGTCTC
EV572677       --> TTGACTTGTGCGTATCACACAAGGCAC--CACATCTAATCTTCTGGTCTC
EX900921       --> TTGACTTGTGCGTATCACACAAGGCAC--CACATCTAATCTTCTGGTCTC
FD528869       --> TTGACTTGTGCGTATCACACAAGGCAC--CACATCTAATCTTCTGGTCTC
FD567118       --> TTGACTTGTGCGTATCACACAAGGCAC--CACATCTAATCTTCTGGTCTC
FD572715       --> TTGACTTGTGCGTATCACACAAGGCAC--CACATCTAATCTTCTGGTCTC
EX907587       --> TTGACTTGTGCGTATCACACAAGGCAC--CACATCTAATCTTCTGGTCTC
EY944265       --> TTGACTTGTGCGTATCACACAAGGCACACCACATCTAATCTTCTGGTCTC
EX751171       --> TTGACTTGTGCGTATCACACAAGGCAC--CACATCTAATCTTCTGGTCTC
EV546928       --> TTGACTTGTGCGTATCACACAAGGCAC--CACATCTAATCTTCTGGTCTC
EV571555       --> TTGACTTGTGCGTATCACACAAGGCAC--CACATCTAATCTTCTGGTCTC
EV530640       --> TTGACTTGTGCGTATCACACAAGGCAC--CACATCTAATCTTCCGGTCTC

               301    -    351
UN16361        --> TACCTCTTTCATTTTCTGGCAGCAGGGACATAATCACACAGGTTTTAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX895143       <-- ..................................................
FD577791       <-- TACCTCTTTCATTTTCTGGCAGCAGGGACATAATCACACAGGTTTTAGCT
EV526067       <-- TACCTCTTTCATTTTCTGGCAGCGGGGACATAATCACACAGGTTTTAGCT
FD568359       <-- TACCTCTTTCATTTTCTGGCAGCAGGGACATAATCACACAGGTTTTAGCT
EV551911       <-- .......TTCATTTTCTGGCAGCAGGGACATAATCACACAGGTTTTAGCT
EV568219       <-- ............................CATAATCACACAGGTTTTAGCT
EV566419       <-- ..................................................
EX897101       <-- ..................................................
EX746855       <-- ..................................................
EY948591       <-- ..................................................
EX903546       <-- ..................................................
FD563490       <-- ..................................................
FD570909       <-- ..................................................
FD562616       <-- ..................................................
FD532374       <-- ..................................................
FD574839       --> TACCTCTTTCATTTTCTGGCAGCAGGGACATAATCACACAGGTTTTAGCT
EV572677       --> TACCTCTTTCATTTTCTGGCAGCAGGGACATAATCACACAGGTTTTAGCT
EX900921       --> TACCTCTTTCATTTTCTGGCAGCAGGGACATAATCACACAGGTTTTAGCT
FD528869       --> TACCTCTTTCATTTTCTGGCAGCGGGGACATAATCACACAGGTTTTAGCT
FD567118       --> TACCTCTTTCATTTTCTGGCAGCAGGGACATAATCACACAGGTTTTAGCT
FD572715       --> TACCTCTTTCATTTTCTGGCAGCAGGGACATAATCACACAGGTTTTAGCT
EX907587       --> TACCTCTTTCATTTTCTGGCAGCAGGGACATAATCACACAGGTTTTAGCT
EY944265       --> TACCTCTTTCATTTTCTGGTAGCAGGGACATAATCACACAGGTTTTAGCT
EX751171       --> TACCTCTTTCATTTTCTGGCAGCAGGGACATAATCACACAGGTTTTAGCT
EV546928       --> CACCTCTTTCATTTTCTGGCAGCAGGGACATAATCACACAGGTTTTAGCT
EV571555       --> TACCTCTTTCATTTTCTGGCAGCAGGGACATAATCACACAGGTTTTAGCT
EV530640       --> TACCTCTTTCATTTTCTGGCAGCGGGGACATAATCACACAGGTTTTAGCT

               351    -    401
UN16361        --> TTCTTATTAAGGTTTCCATGGTGCTGGTGGGGGAGGTGGAGTAGGGAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX895143       <-- ..................................................
FD577791       <-- TTCTTATTAAGGTTTCCATGGTGCTGGTGGGGGAGGTGGAGTAGGGAACA
EV526067       <-- TTCTTATTAAGGTTTCCATGGTGCTGGTGAGGGAGGTGGAGTAGGGAACA
FD568359       <-- TTCTTATTAAGGTTTCCATGGTGCTGGTGGGGGAGGTGGAGTAGGGAACA
EV551911       <-- TTCTTATTAAGGTTTCCATGGTGCTGGTGGGGGAGGTGGAGTAGGGAACA
EV568219       <-- TTCTTATTAAGGTTTCCATGGTGCTGGTGGGGGAGGTGGAGTAGGGAACA
EV566419       <-- .......TAAGGTTTCCATGGTGCTGGTGGGGGAGGTGGAGTAGGGAACA
EX897101       <-- .........AGGTTTCCATGGTGCTGGTGGGGGAGGTGGAGTAGGGAACA
EX746855       <-- ..................................................
EY948591       <-- ..................................................
EX903546       <-- ..................................................
FD563490       <-- ..................................................
FD570909       <-- ..................................................
FD562616       <-- ..................................................
FD532374       <-- ..................................................
FD574839       --> TTCTTATTAAGGTTTCCATGGTGCTGGTGGGGGAGGTGGAGTAGGGAACA
EV572677       --> TTCTTA---AGGTTTCCATGGTGCTGGTGGGGGAGGTGGAGTAGGGAACA
EX900921       --> TTCTTATTAAGGTTTCCATGGTGCTGGTGGGGGAGGTGGAGTAGGGAACA
FD528869       --> TTCTTATTAAGGTTTCCATGGTGCTGGTGGGGGAGGTGGAGTAGGGAACA
FD567118       --> TTCTTATTAAGGTTTCCATGGTGCTGGTGGGGGAGGTGGAGTAGGGAACA
FD572715       --> TTCTTATTAAGGTTTCCATGGTGCTGGTGGGGGAGGTGGAGTAGGGAACA
EX907587       --> TTCTTATTAAGGTTTC-ATGGTGCTGGTGGGGGAGGTGGAGTAGGGAACA
EY944265       --> TTCTTA---AGGTTTCCATGGTGCTGGTGGGGGAGGTGGAGTAGGGAACA
EX751171       --> TTCTTATTAAGGTTTCAATGGTGCTGGTGGGGGAGGTGGAGTAGGGAACA
EV546928       --> TTCTTATTAAGGTTTCCATGGTGCTGGTGGGGGAGGTGGAGTAGGGAACA
EV571555       --> TTCTTA---AGGTTTCCATGGTGCTGGTGGGGGAGGTGGAGTAGGGAACA
EV530640       --> TTCTTATTAAGGTTTCCATGGTGCTGGTGAGGGAGGTGGAGTAGGGAACA

               401    -    451
UN16361        --> ACGGAGGAACGGCTGAAAAGATAGTATTTTTGTCTATAGTACCAGTTGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX895143       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD577791       <-- ACGGAGGAACGGCTGAGAAGATAGTATTTTTGTCTATAGTACCAGTTGCC  Raphanus sativus cv Rat-Tail Radish #3870
EV526067       <-- ACGGAGGAACGGCTGAGAAGATAGTATTTTTGTCTATAGTACCAGTTGCC  Raphanus raphanistrum subsp. maritimus
FD568359       <-- ACGGAGGAACGGCTGAGAAGATAGTATTTTTGTCTATAGAACCAGTTGCC  Raphanus sativus cv Early Scarlet Globe
EV551911       <-- ACGGAGGAACGGCTGAGAAGATAGTACTTT-GTCTATAGTACAAGTTGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV568219       <-- ACGGAGGAACGGCTGAGAAGATAGTATTTTTGTCTATAGTACCAGTTGCC  Raphanus raphanistrum subsp. landra
EV566419       <-- ACGGAGGAACGGCTGAGAAGATAGTATTTTTGTCTATAGTACCAGTTGCC  Raphanus raphanistrum subsp. landra
EX897101       <-- ACGGAGGAACGGCTGAGAAGATAGTATTTT-GTCTATAGTACCAGTTGCA  Raphanus sativus cv Early Scarlet Globe
EX746855       <-- ...............agAAGATAGTATTTT-GTCTATAGTACCAGTTGCC  Raphanus raphanistrum subsp. maritimus
EY948591       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX903546       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD563490       <-- ..................................................  Raphanus sativus var. oleiformis
FD570909       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD562616       <-- ..................................................  Raphanus sativus var. oleiformis
FD532374       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD574839       --> ACGGAGGAACGGCTGAAAAAATAGTATTTTTGTCTATAGTACCAGTTGCC  Raphanus sativus cv Early Scarlet Globe
EV572677       --> ACGGAGGAACGGCTGAAAAAATAGTATTTTTGTCTATAGTACCAGTTGCC  Raphanus raphanistrum subsp. landra
EX900921       --> ACGGAGGAACGGCTGAAAAGATAGTATTTTTGTCTATAGTACCAGTTGCA  Raphanus sativus cv Early Scarlet Globe
FD528869       --> ACGGAGGAACGGCTGAAAA...............................  Raphanus raphanistrum subsp. maritimus
FD567118       --> ACGGAGGAACGGCTGAAAAGATAGTATTTTTGTCTATAGTACCAGTTGCC  Raphanus sativus var. oleiformis
FD572715       --> ACGGAGGAACGGCTGAAAAGATAGTATTTTTGTCTATAGAACCAGTTGCC  Raphanus sativus cv Early Scarlet Globe
EX907587       --> ACGGAGGAACGGCTGAAAAGATAGTATTTTTGTCTATAGTACCAGTTGCC  Raphanus sativus cv Rat-Tail Radish #3870
EY944265       --> ACGGAGGAACGGCTGAAAAGATAGTATTTTTGTCTATAGTACCAGTTGCC  Raphanus sativus cv Rat-Tail Radish #3870
EX751171       --> ACGGAGGAACGGATGAAAAGATAGTATTTTTGTCTATAGTACCAGTTGCC  Raphanus raphanistrum subsp. maritimus
EV546928       --> ACGGAGGAACGGCTGAAAAGATAGTACTTT-GTCTATAGTACAAGTTGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571555       --> ACGGAGGAACGGCTGAAAAGATAGTATTTTTGTCTATAGTACCAGTTGCC  Raphanus raphanistrum subsp. landra
EV530640       --> ACGGAGGAACGGCTGAAAAGATAGTATTTTTGTCTATAGTACCAGTTGCC  Raphanus raphanistrum subsp. maritimus

               451    -    501
UN16361        --> TCTTCTTCACCAGACAATGCCACGAGAGCTGCGACCAGACCAGCATTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX895143       <-- ..................................................
FD577791       <-- TCTTCTTCACCAGACAATGCCACGAGAGCTGCGACCAGACCAGCATTTCC
EV526067       <-- TCTTCTTCACCAGACAATGCCACGAGAGCTGCGACCAGACCAGCATTTCC
FD568359       <-- TCTTCTTCACCAGACAATGCCACGAGAGCTGCGACCAGACCAGCATTTCC
EV551911       <-- TCTTCTTCACCAGACAATGCCACGAGAGCTGCGACCAGACCAGCATTTCC
EV568219       <-- TCTTCTTCACCAGACAATGCCACGAGAGCTGCGACCAGACCAGCATTTCC
EV566419       <-- TCTTCTTCACCAGACAATGCCACGAGAGCTGCGACCAGACCAGCATTTCC
EX897101       <-- TCCTCTTCACCAGACAATGCCACGAGAGCTGCGACCAGACCAGCATTTCC
EX746855       <-- TCTTCTTCACCAGACAATGCCACGAGAGCTGCGACCAGACCAGCATTTCC
EY948591       <-- ..................................................
EX903546       <-- ..................................................
FD563490       <-- ..................................................
FD570909       <-- ..................................................
FD562616       <-- ..................................................
FD532374       <-- ..................................................
FD574839       --> TCTTCTTCACCAAACAATGCCACGAGAGCTGCGACCAGACCAGCATTTCC
EV572677       --> TCTTCTTCACCAAACAATGCCACGAGAGCTGCGACCAGACCAGCATTTCC
EX900921       --> TCCTCTTCACCAGACAATGCCACGAGAGCTGCGACCAGACCAGCATTTCC
FD528869       --> ..................................................
FD567118       --> TCTTCTTCACCAGACAATGCCACGAGAGCTGCGACCAGACCAGCATTTCC
FD572715       --> TCTTCTTCACCAAACAATGCCACGAGAGCTGCGACCAGACCAGCATTTCC
EX907587       --> TCTTCTTCACCAGATAATGCCACGAGAGCTGCGACCAGACCAGCATTTCC
EY944265       --> TCCTCTTCACCCGACAATGCCACGAGAGCTGCGACCAGACCAGCATTTCC
EX751171       --> TCTTCTTCACCAGACAATGCCACGAGAGCTGCGACCAGACCAGCATTTCC
EV546928       --> TCTTCTTCACCAGACAATGCCACGAGAGCTGCGACCAGACCAGCATTTCC
EV571555       --> TCTTCTTCACCAGACAATGCCACGAGTGCTGCGACCAGACCAGCATTTCC
EV530640       --> TCTTCTTCACCAGACAATGCCACGAGAGCTGCGACCAGACCAGCATTTCC

               501    -    551
UN16361        --> TGCAAGAGTTGGTTCAGTGTAGTTGTAGTTGGTCCGGACATCGCGGAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX895143       <-- ..................................................
FD577791       <-- TGCAAGAGTTGGTTCAGTGTAGTTGTAGTTGGTCCGGACATCGCGGAACC
EV526067       <-- TGCAAGAGTTGGTTCAGTGTAGTTGTAGTTGGTCCGGACATCGCGGAACC
FD568359       <-- TGCAAGAGTTGGTTCAGTGTAGTTGTAGTTGGTCCGGACATCGCGGAACC
EV551911       <-- TGCAAGAGTTGGTTCAGTGTAGTTGTAGTTGGTCCGGACATCGCGGAACC
EV568219       <-- TGCAAGAGTTGGTTCAGTGTAGTTGTAGTTGGTCCGGACATCGCGGAACC
EV566419       <-- TGCAAGAGTCGGTTCAGTGTAGTTGTAGTTGGTCCGGACATCGCGGAACC
EX897101       <-- TGCAAGAGTTGGTTCAGTGTAGTTGTAGTTGGTCCGGACATCGCGGAACC
EX746855       <-- TGCAAGAGTTGGTTCAGTGTAGTTGTAGTTGGTCCGGACATCGCGGAACC
EY948591       <-- ..................................................
EX903546       <-- ..................................................
FD563490       <-- ..................................................
FD570909       <-- ..................................................
FD562616       <-- ..................................................
FD532374       <-- ..................................................
FD574839       --> TGCAAGAGTTGGTTCAGTGTAGTTGTAGTTGGTCCGGACATCGCGGAACC
EV572677       --> TGCAAGAGTCGGTTCAGTGTAGTTGTAGTTGGTCCGGACATCGCGGAACC
EX900921       --> TGCAAGAGTTGGTTCAGTGTAGTTGTAGTTGGTCCGGACATCGCGGAACC
FD528869       --> ..................................................
FD567118       --> TGCAAGAGTTGGTTCAGTGTAGTTGTAGTTGGTCCGGACATCGCGGAACC
FD572715       --> TGCAAGAGTTGGTTCAGTGTAGTTGTAGTTGGTCCGGACATCGCGGAACC
EX907587       --> TGCAAGAGTTGGTTCAGTGTAGTTGTAGTCGGTCCGGACATCGCGGAACC
EY944265       --> TGCAAGAGTCGGTTCAGTGTAGTTGTAGTTGGTCCGGACATCGCGGAACC
EX751171       --> TGCAAGAGTTGGTTCAGTGTAGTTGTAGTTGGTCCGGACATCGCGGAACC
EV546928       --> TGCAAGAGTTGGTTCAGTGTAGTTGTAGTTGGTCCGGACATCGCGGAACC
EV571555       --> TGCAAGAGTCGGTTCAGTGTAGTTGTAGTTGGTCCGGACATCGCGGAACC
EV530640       --> TGCAAGAGTTGGTTCAGTGTAGTTGTAGTTGGTCCGGACATCGCGGAACC

               551    -    601
UN16361        --> CATCACGTTTGTCAGGACCAGCAACCATGGCTCCTTCAATCGTGTTTGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX895143       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD577791       <-- CATCACGTTTGTCAGGACCAGCAACCATGGCTCCTTCAATCGTGTTTGGG  Raphanus sativus cv Rat-Tail Radish #3870
EV526067       <-- CATCACGTTTGTCAGGACCAGCAACCATGGCTCCTTCAATCGTGTTTGGG  Raphanus raphanistrum subsp. maritimus
FD568359       <-- CATCACGTTTGTCAGGACCAGCAACCATGGCTCCTTCAATGGTGTTTGGG  Raphanus sativus cv Early Scarlet Globe
EV551911       <-- CATCACGTTTGTCAGGACCAGCAACCATGGCTCCTTCAATCGTGTTTGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV568219       <-- CATCACGTTTGTCAGGACCAGCAACCATGGCTCCTTCAATCGTGTTTGGG  Raphanus raphanistrum subsp. landra
EV566419       <-- CATCGCGCTTGTCAGGACCAGCAACCATGGCTCCTTCAATGGTGTTTGGG  Raphanus raphanistrum subsp. landra
EX897101       <-- CATCACGTTTGTCAGGACCAGCAACCATGGCTCCTTCAATGGTGTTTGGG  Raphanus sativus cv Early Scarlet Globe
EX746855       <-- CATCACGTTTGTCAGGACCAGCAACCATGGCTCCTTCAATCGTGTTTGGG  Raphanus raphanistrum subsp. maritimus
EY948591       <-- ............................................TTTGGG  Raphanus sativus cv Rat-Tail Radish #3870
EX903546       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD563490       <-- ..................................................  Raphanus sativus var. oleiformis
FD570909       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD562616       <-- ..................................................  Raphanus sativus var. oleiformis
FD532374       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD574839       --> CATCACGTTTGTCAGGACCAGCAACCATGGCTCCTTCAATGGTGTTTGGG  Raphanus sativus cv Early Scarlet Globe
EV572677       --> CATCGCGCTTGTCAGGACCAGCAACCATGGCTCCTTCAATGGTGTTTGGG  Raphanus raphanistrum subsp. landra
EX900921       --> CATCACGTTTGTCAGGACCAGCAACCATGGCTCCTTCAATGGTGTTTGGG  Raphanus sativus cv Early Scarlet Globe
FD528869       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD567118       --> CATCACGTTTGCCAGGACCAGCAACCATGGCTCCTTCAATGGTGTTTGGG  Raphanus sativus var. oleiformis
FD572715       --> CATCACGTTTGTCAGGACCAGCAACCATGGCTCCTTCAATGGTGTTTGGG  Raphanus sativus cv Early Scarlet Globe
EX907587       --> CATCACGTTTGTCAGGACCAGCAACCATGGCTCCTTCAATCGTGTTTGGG  Raphanus sativus cv Rat-Tail Radish #3870
EY944265       --> CATCACGCTTGTCAGGACCAGCAACCATGGCTCCTTCAACCGTGTTTGGG  Raphanus sativus cv Rat-Tail Radish #3870
EX751171       --> CATCACGTTTGTCAGGACCAGCAACCATGGCTCCTTCAATCGTGTTTGGG  Raphanus raphanistrum subsp. maritimus
EV546928       --> CATCACGTTTGTCAGGACCAGCAACCATGGCTCCTTCAATCGTGTTTGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571555       --> CATCGCGCTTGTCAGGACCAGCAACCATGGCTCCTTCAATGGTGTTTGGG  Raphanus raphanistrum subsp. landra
EV530640       --> CATCACGTTTGTCAGGACCAGCAACCATGGCTCCTTCAATCGTGTTTGGG  Raphanus raphanistrum subsp. maritimus

               601    -    651
UN16361        --> TTTGGTTTCTTGCTGTCTCTCCATTTCCATCCTCCTTTGCAGTTATATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX895143       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD577791       <-- TTTGGTTTCTTGCTGTCTCTCCATTTCCATCCTCCTTTGCAGTTATATTT  Raphanus sativus cv Rat-Tail Radish #3870
EV526067       <-- TTTGGTTTCTTGCTGTCTCTCCATTTCCATCCTCCTTTGCAGTTATA---  Raphanus raphanistrum subsp. maritimus
FD568359       <-- TTTGGTTTCTTGCTGTCTCTCCATTTCCATCCTCCTTTGCAGTTATATTT  Raphanus sativus cv Early Scarlet Globe
EV551911       <-- TTTGGTTTCTTGCTGTCTCTCCATTTCCATCCTCCTTTGCAGTTAT----  Raphanus raphanistrum subsp. raphanistrum (NY)
EV568219       <-- TTTGGTTTCTTGCTGTCTCTCCATTTCCATCCTCCTTTGCAGTTATATTT  Raphanus raphanistrum subsp. landra
EV566419       <-- TTTGGTTTCTTGCTGTCTCTCCATTTCCATCCTCCTTTGCAGTTATATTT  Raphanus raphanistrum subsp. landra
EX897101       <-- TTTGGTTTCTTGCTGTCTCTCCATTTCCATCCTCCTTTGCAGTTATATTT  Raphanus sativus cv Early Scarlet Globe
EX746855       <-- TTTGGTTTCTTGCTGTCTCTCCATTTCCATCCTCCTTTGCAGTTATATTT  Raphanus raphanistrum subsp. maritimus
EY948591       <-- TTGGGTTTCTTGCTGTCTCTCCATTTCCATCCTCCTTTGCAGTTATATTT  Raphanus sativus cv Rat-Tail Radish #3870
EX903546       <-- ....................................TTGCAGTTATATTT  Raphanus sativus cv Rat-Tail Radish #3870
FD563490       <-- ..................................................  Raphanus sativus var. oleiformis
FD570909       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD562616       <-- ..................................................  Raphanus sativus var. oleiformis
FD532374       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD574839       --> TTTGGTTTCTTACTGTCTCTCCATTTCCATCCTCCTTTGCAGTTATATTT  Raphanus sativus cv Early Scarlet Globe
EV572677       --> TTTGGTTTCTTGCTGTCTCTCCATTTCCATCCTCCTTTGCAGTTATATTT  Raphanus raphanistrum subsp. landra
EX900921       --> TTTGGTTTCTTGCTGTCTCTCCATTTCCATCCTCCTTTGCAGTTATATTT  Raphanus sativus cv Early Scarlet Globe
FD528869       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD567118       --> TTTGGTTTCTTGCTGTCTCTCCATTTCCATCCTCCTTTGCAGTTATATTT  Raphanus sativus var. oleiformis
FD572715       --> TTTGGTTTCTTGCTGTCTCTCCATTTCCATCCTCCTTTGCAGTTATATTT  Raphanus sativus cv Early Scarlet Globe
EX907587       --> TTTGGTTTCTTGCTGTCTCTCCATTTCCATCCTCCTTTGCAGTTATATTT  Raphanus sativus cv Rat-Tail Radish #3870
EY944265       --> TTGGGTTTCTTGCTGTCTCTCCATTTCCATCCTCCTTTGCAGTTATATTT  Raphanus sativus cv Rat-Tail Radish #3870
EX751171       --> TTTGGTTTCTTGCTGTCTCTCCATTTCCATCCTCCTTTGCAGTTATATTT  Raphanus raphanistrum subsp. maritimus
EV546928       --> TTTGGTTTCTTGCTGTCTCTCCATTTCCATCCTCCTTTGCAGTTATATTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571555       --> TTTGGTTTCTTGCTGTCTCTCCATTTCCATCCTCCTTTGCAGTTATATTT  Raphanus raphanistrum subsp. landra
EV530640       --> TTTGGTTTCTTGCTGTCTCTCCATTTCCATCCTCCTTTGCAGTTATATTT  Raphanus raphanistrum subsp. maritimus

               651    -    701
UN16361        --> GACTTTGTTCTTGGGAATCGAAGCTCCTCGATGATGCACGCGTTTCGGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX895143       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD577791       <-- GACTTc............................................  Raphanus sativus cv Rat-Tail Radish #3870
EV526067       <-- -TTTTTGTTCTTGGGAATCGAAGCTCCTCGATGATGCACGCGTTTCGGGT  Raphanus raphanistrum subsp. maritimus
FD568359       <-- GACTTTGTTCTTGGGAACCGAAGCTCCTCGATGATGCACGCGTTTCGGGT  Raphanus sativus cv Early Scarlet Globe
EV551911       <-- -ATTTTGTTCTTGGGAATCGAAGCTCCTCGATGATGCACGCGTTTCGGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV568219       <-- GACTTTGTTCTTGGGAATCGAAGCTCCTCGATGATGCACGCGTTTCGGGT  Raphanus raphanistrum subsp. landra
EV566419       <-- GACTTTGTTCTTGGGAATCGAAGCTCCTCGATGATGCACGCGTTTCGGGT  Raphanus raphanistrum subsp. landra
EX897101       <-- GACTTTGTTCTTGGGAATCGAAGCTCCTCGATGGTGCACGCGTTTCGGGT  Raphanus sativus cv Early Scarlet Globe
EX746855       <-- GACTTTGTTCTTGGGAATCGAAGCTCCTCGATGATGCACGCGTTTCGGGT  Raphanus raphanistrum subsp. maritimus
EY948591       <-- GACTTTGTTCTTGGGAATCGAAGCTCCTCGATGATGCACGCGTTTCGGGT  Raphanus sativus cv Rat-Tail Radish #3870
EX903546       <-- GACTTTGTTCTTGGGAATCGAAGCTCCTCGATGATGCACGCGTTTCGGGT  Raphanus sativus cv Rat-Tail Radish #3870
FD563490       <-- ..................................................  Raphanus sativus var. oleiformis
FD570909       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD562616       <-- ..................................................  Raphanus sativus var. oleiformis
FD532374       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD574839       --> GACTTTGTTCTTGGGAATCGAAGCTCCTCGATGATGCACGCGTTTCGGGT  Raphanus sativus cv Early Scarlet Globe
EV572677       --> GACTTTGTTCTTGGGAATCGAAGCTCCTCGATGATGCACGCGTTTCGGGT  Raphanus raphanistrum subsp. landra
EX900921       --> GACTTTGTTCTTGGGAATCGAAGCTCCTCGATGGTGCACGCGTTTCGGGT  Raphanus sativus cv Early Scarlet Globe
FD528869       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD567118       --> GACTTTGTTCTTGGGAATCGAAGCTCCTCGATGATGCACGCGTTTCGGGT  Raphanus sativus var. oleiformis
FD572715       --> GACTTTGTTCTTGGGAACCGAAGCTCCTCGATGATGCACGCGTTTCGGGT  Raphanus sativus cv Early Scarlet Globe
EX907587       --> GACTTTGTTCTTGGGAATCGAAGCTCCTCGATGATGCACGCGTTTCGGGT  Raphanus sativus cv Rat-Tail Radish #3870
EY944265       --> GACTTTGTTCTTGGGAATCGAAGCTCCTCGATGATGCACGCGTTTCGGGT  Raphanus sativus cv Rat-Tail Radish #3870
EX751171       --> GACTTTGTTCTTGGGAATCGAAGCTCCTCGATGATGCACGCGTTTCGGGT  Raphanus raphanistrum subsp. maritimus
EV546928       --> -----TGTTCTTGGGAATCGAAGCTCCTCGATGATGCACGCGTTTCGGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571555       --> GACTTTGTTCTTGGGAATCGAAGCTCCTCGATGATGCACGCGTTTCGGGT  Raphanus raphanistrum subsp. landra
EV530640       --> ----TTGTTCTTGGGAATCGAAGCTCCTCGATGATGCACGCGTTTCGGGT  Raphanus raphanistrum subsp. maritimus

               701    -    751
UN16361        --> ATTTTGTGCCAAAACCCACC-AGATAACTCATTTTCCGAGGGTTTTTACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX895143       <-- ..................................................
FD577791       <-- ..................................................
EV526067       <-- ATTTTGTGCCAAAACCCACC-AGc..........................
FD568359       <-- ATTTTGTGCCAAAACCCACC-AGATAACTCATTTTCCGAGGGTTTTTACC
EV551911       <-- ATTTTGTGCCAAAACCCACC-AGATAACTCATTTTCCGAGGGTTTTTACC
EV568219       <-- ATTTTGTGCCAAAACCCACC-AGATAACTCATTTTCCGAGAGTTTTTACC
EV566419       <-- ATTTTGTGCCAAAACCCACC-AGATAACTCATTTTCCGAGGGTTTTTACC
EX897101       <-- ATTTTGTGCCAAAACCCACC-AGATAACTCATTTTCCGAGGGTTTTTACC
EX746855       <-- ATTTTGTGCCAAAACCCACC-AGATAACTCATTTTCCGAGGGTTTTTACC
EY948591       <-- ATTTTGTGCCAAAACCCACC-AGATAACTCATTTTCCGAGGGTTTTTACC
EX903546       <-- ATTTTGTGCCAAAACCCACCCAGATAACTCATTTTCCGAGGGTTTTTACC
FD563490       <-- ........................TAACTCATTT-CCGAGGGTTTT-ACC
FD570909       <-- ..................................................
FD562616       <-- ..................................................
FD532374       <-- ..................................................
FD574839       --> ATTCTGTGCCAAAACCCACC-AGATAACTCATTTTCCGAGGGTTT.....
EV572677       --> ATTTTGTGCCAAAACCCACC-AGAT.........................
EX900921       --> ATTTTGTGCCAAAACCCACC-AGATAACTCATTTTCCGAGGGTTTTTACC
FD528869       --> ..................................................
FD567118       --> ATTTTGTGCCAAAACCCACC-AGATAACTCATTTTCCGAGGGTTTTTACC
FD572715       --> ATTTTGTGCCAAAACCCACC-AGATAACTCATTTTCCGAGGGTTTTTACC
EX907587       --> ATTTTGTGCCAAAACCCACC-AGATAACTCATTTTCCGAGGGTTTTTACC
EY944265       --> ATTTTGTGCCAAAACCCACC-AGATAACTCATTTTCCGAGGGTTTTTACC
EX751171       --> ATTTTGTGCCAAAACCCACC-AGATAACTCATTTTCCGAGGGTTTTTACC
EV546928       --> ATTTTGTGCCAAAACCCACC-AGATAACTCATTTTCCGAGGGTTTTTACC
EV571555       --> ATTTTGTGCCAAAACCCACC-AGATAACTCATTTTCCGAGGGTTTTTACC
EV530640       --> ATTTTGTGCCAAAACCCACC-AGc..........................

               751    -    801
UN16361        --> GAGTATATAATCAATCTGAGTCCTCGCAAACTCTCGTAGGACATTGGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX895143       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD577791       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV526067       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD568359       <-- GAGTATATAATCAATCTGAGTCCTCGCAAACTCTCGTAGGACATTGGTTG  Raphanus sativus cv Early Scarlet Globe
EV551911       <-- GAGTATGTAATCGATCTGAGTCCTCGCAAACTCTCGTAGGACATTGGTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV568219       <-- GAGTATGTAATCGATCTGAGTCCTCGCAAACTCTCGTAGGACATTGGTTG  Raphanus raphanistrum subsp. landra
EV566419       <-- GAGTATATAATCAATCTGAGTCCTCGCAAACTCTCGTAGGACATTGGTTG  Raphanus raphanistrum subsp. landra
EX897101       <-- GAGTATATAATCAATCTGAGTCCTAGCAAACTCTCGTAGGACATTGGTTG  Raphanus sativus cv Early Scarlet Globe
EX746855       <-- GAGTATGTAATCGATCTGAGTCCTCGCAAACTCTCGTAGGACATTGGTTG  Raphanus raphanistrum subsp. maritimus
EY948591       <-- GAGTATATAATCAATCTGAGTCCTCGCAAACTCTCGTAGGACATTGGTTG  Raphanus sativus cv Rat-Tail Radish #3870
EX903546       <-- GAGTATGTAATCGATCTGAGTCCTCGCAAACTCTCGTAGGACATTGGTTG  Raphanus sativus cv Rat-Tail Radish #3870
FD563490       <-- GAGTATATAATCAATCTGAGTCCTCGCAAACTCTCGTAGGACATTGGTTG  Raphanus sativus var. oleiformis
FD570909       <-- ..GTATATAATCAATCTGAGTCCTCGCAAACTCTCGTAGGACATTGGTTG  Raphanus sativus cv Early Scarlet Globe
FD562616       <-- ..................................................  Raphanus sativus var. oleiformis
FD532374       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD574839       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV572677       --> ..................................................  Raphanus raphanistrum subsp. landra
EX900921       --> GAGTATATAATCAATCTG................................  Raphanus sativus cv Early Scarlet Globe
FD528869       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD567118       --> GAGTATATAATCAAT...................................  Raphanus sativus var. oleiformis
FD572715       --> GAGTATATAATCAATCTGAGTCCTCGCAAACTCTCGTAGGACAT......  Raphanus sativus cv Early Scarlet Globe
EX907587       --> GAGTATGTAATCGATCTGAGTCCTCGCAAACTCTCGTAGGACATTGGTTG  Raphanus sativus cv Rat-Tail Radish #3870
EY944265       --> GAGTATATA.........................................  Raphanus sativus cv Rat-Tail Radish #3870
EX751171       --> GAGTATGTAATCGATCTGAGTCCTCGCAAACTCTC...............  Raphanus raphanistrum subsp. maritimus
EV546928       --> GAGTATGTAATCGATCTGAGTCCTCGCAAACTCTCGTAGGACATTGGTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571555       --> GAGTATATAATCAATCTGAGTCCTCGCAAACTCTCGTAGGACATTGGTTG  Raphanus raphanistrum subsp. landra
EV530640       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               801    -    851
UN16361        --> AATAGAAATTAGGTCCACAGTACCATCCAGGAGTATCAGCAGCATCAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX895143       <-- ..................................................
FD577791       <-- ..................................................
EV526067       <-- ..................................................
FD568359       <-- AATAGAAATTAGGTCCACAGTACCATCCAGGAGTATCAGCAGCATCAAGA
EV551911       <-- AATAGAAATTAGGTCCACAGTACCATCCAGGAGTATCAGCAGCATCAAGA
EV568219       <-- AATAGAAATTAGGTCCACAGTACCATCCAGGAGTATCAGCAGCATCAAGA
EV566419       <-- AATAGAAATTAGGTCCACAGTACCATCCAGGAGTATCAGCAGCATCAAGA
EX897101       <-- AATAGAAATTAGGTCCACAGTACCATCCAGGAGTATCAGCAGCATCAAGA
EX746855       <-- AATAGAAATTAGGTCCACAGTACCATCCAGGAGTATCAGCAGCATCAAGA
EY948591       <-- AATAGAAATTAGGTCCACAGTACCATCCAGGAGTATCAGCAGCATCAAGA
EX903546       <-- AATAGAAATTAGGTCCACAGTACCATCCAGGAGTATCAGCAGCATCAAGA
FD563490       <-- AATAGAAATTAGGTCCACAGTACCATCCAGGAGTATCAGCAGCATCAAGA
FD570909       <-- AATAGAAATTAGGTCCACAGTACCATCCGGGAGTATCAGCAGCATCAAGA
FD562616       <-- ............GTCCACAGTACCATCCAGGAGTATCAGCAGCATCAAGA
FD532374       <-- ..................................................
FD574839       --> ..................................................
EV572677       --> ..................................................
EX900921       --> ..................................................
FD528869       --> ..................................................
FD567118       --> ..................................................
FD572715       --> ..................................................
EX907587       --> AATAGAAATTAGGTCCACAGTACCATCCAGGAGTATCAGCAGCAT.....
EY944265       --> ..................................................
EX751171       --> ..................................................
EV546928       --> AATAGAAATTAGGTCCACAGTACCATCCAGGAGTATCAGCAGCATCAAGA
EV571555       --> AATAGAAATTAGGTCCACAGTACCATCCAGGAGTATCAGCAGCATCAAGA
EV530640       --> ..................................................

               851    -    901
UN16361        --> TAGTCACTGTACAATGTCGCTAAGAAGGCTGCATTTGCAGCATACTGCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX895143       <-- ..................................................
FD577791       <-- ..................................................
EV526067       <-- ..................................................
FD568359       <-- TAGTCACTGTACAATGTCGCTAAGAAGGCTGCATTTGCAGCATACTGCAG
EV551911       <-- TAGTCACTGTACAATGTCGCTAAGAAGGCTGCATTTGCAGCATACTGCAG
EV568219       <-- TAGTCACTGTACAATGTCGCTAAGAAGGCTGCATTTGCAGCATACTGCAG
EV566419       <-- TAGTCACTGTACAATGTCGCTAAGAAGGCTGCATTTGCAGCATACTGCAG
EX897101       <-- TAGTCACTGTACAATGTCGCTAAGAAGGCTGCATTTGCAGCATACTGCAG
EX746855       <-- TAGTCACTGTACAATGTCGCTAAGAAGGCTGCATTTGCAGCATACTGCAG
EY948591       <-- TAGTCACTGTACAATGTCGCTAAGAAGGCTGCATTTGCAGCATACTGCAG
EX903546       <-- TAGTCACTGTACAATGTCGCTAAGAAGGCTGCATTTGCAGCATACTGCAG
FD563490       <-- TAGTCACTGTACAATGTCGCTAAGAAGGCTGCATTTGCAGCATACTGCAG
FD570909       <-- TAGTCACTGTACAATGTCGCTAAGAAGGCTGCATTTGCAGCATACTGCAG
FD562616       <-- TAGTCACTGTACAATGTCGCTAAGAAGGCTGCATTTGCAGCATACTGCAG
FD532374       <-- ..................................................
FD574839       --> ..................................................
EV572677       --> ..................................................
EX900921       --> ..................................................
FD528869       --> ..................................................
FD567118       --> ..................................................
FD572715       --> ..................................................
EX907587       --> ..................................................
EY944265       --> ..................................................
EX751171       --> ..................................................
EV546928       --> TAGTCACTGTACAATGTCGCTAAGAAGGCTGCATTTGCAGCATACTGCAG
EV571555       --> TAGTCACTGTACAATGTCGCTAAGAAGGCTGCATTTGCAGCATACTGCAG
EV530640       --> ..................................................

               901    -    951
UN16361        --> AGGCTGTGGGTCTCCATGATTTAACTCTATCAAACCTCCACTGG-TTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX895143       <-- ..................................................
FD577791       <-- ..................................................
EV526067       <-- ..................................................
FD568359       <-- AGGCTGTGGGTCTCCATGATTTAACTCTATCAAACCTCCACTGG-TTCTG
EV551911       <-- AGGCTGTGGGTCTCCATGATTTAACTCTATCAA-CCTCCACTGG-TTCTG
EV568219       <-- AGGCTGTGGGTCTCCATGATTTAACTCTATCAAACCTCCACTGG-TTCTG
EV566419       <-- AGGCTGTGGGTCTCCATGATTTAACTCTATCAAACCTCCACTGG-TTCTG
EX897101       <-- AGGCTGTGGGTCTCCATGATTTAACTCTATCAAACCTCCACTGG-TTCTG
EX746855       <-- AGGCTGTGGGTCTCCATGATTTAACTCTATCAAACCTCCACTGG-TTCTG
EY948591       <-- AGGCTGTGGGTCTCCATGATTTAACTCTATCAAACCTCCACTGG-TTCTG
EX903546       <-- AGGCTGTGGGTCTCCATGATTTAACTCTATCAAACCTCCACTGG-TTCTG
FD563490       <-- AGGCTGTGGGTCTCCATGATTTAACTCTATCAAACCTCCACTGG-TTCTG
FD570909       <-- AGGCTGTGGGTCTCCATGATTTAACTCTATCAAACCTCCACTGG-TTCTG
FD562616       <-- AGGCTGTGGATCTCCATGATTTAACTCTATCAAACCTCCACTGG-TTCTG
FD532374       <-- ..................................................
FD574839       --> ..................................................
EV572677       --> ..................................................
EX900921       --> ..................................................
FD528869       --> ..................................................
FD567118       --> ..................................................
FD572715       --> ..................................................
EX907587       --> ..................................................
EY944265       --> ..................................................
EX751171       --> ..................................................
EV546928       --> AGGCTGTGGGTCTCCATGATTTAACTCTATCAA-CCTCCACTGG-TTCT.
EV571555       --> AGGCTGTGGGTCTCCATGATTTAACTCTATCAAACCTCCACTGGGTTCTG
EV530640       --> ..................................................

               951    -   1001
UN16361        --> TTAAATTTGTTGAAATAAGGCAGGTATGAGCACATGACTATGCTGGTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX895143       <-- ..................................................
FD577791       <-- ..................................................
EV526067       <-- ..................................................
FD568359       <-- TTAAATTTGTTGAAATAAGGCAGGTATGAGCACATGACTATGCTGGTCTG
EV551911       <-- TTAAATTTGTTGAAATAAGGCAGGTATGAGCACATGACTATGCTGGTCTG
EV568219       <-- TTAAATTTGTTGAAATAAGGCAGGTATGAGCACATGACTATGCTGGTCTG
EV566419       <-- TTAAATTTGTTGAAATAAGGCAGGTATGAGCACATGACTATGCTGGTCTG
EX897101       <-- TTAAATTTGTTGAAATAAGGCAGGTATGAGCACATGACTATGCTGGTCTG
EX746855       <-- TTAAATTTGTTGAAATAAGGCAGGTATGAGCACATGACTATGCTGGTCTG
EY948591       <-- TTAAATTTGTTGAAATAAGGCAGGTATGAGCACATGACTATGCTTGTCTG
EX903546       <-- TTAAATTTGTTGAAATAAGGCAGGTATGAGCACATGACTATGCTGGTCTG
FD563490       <-- TTAAATTTGTTGAAATAAGGCAGGTATGAGCACATGACTATGCTGGTCTG
FD570909       <-- TTAAATTTGTTGAAATAAGGCAGGTATGAGCACGTGACTATGCTGGTCTG
FD562616       <-- TTAAATTTGTTGAAATAAGGCAGGTATGAGCACATGACTATGCTTGTCTG
FD532374       <-- ..................................................
FD574839       --> ..................................................
EV572677       --> ..................................................
EX900921       --> ..................................................
FD528869       --> ..................................................
FD567118       --> ..................................................
FD572715       --> ..................................................
EX907587       --> ..................................................
EY944265       --> ..................................................
EX751171       --> ..................................................
EV546928       --> ..................................................
EV571555       --> TTAAATTTGTTGAA....................................
EV530640       --> ..................................................

               1001   -   1051
UN16361        --> ATTATGGAAGGTTCTGAGAATTTCTTCATATGGATATCCAGGACTCAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX895143       <-- ..................................................
FD577791       <-- ..................................................
EV526067       <-- ..................................................
FD568359       <-- ATTATGcc..........................................
EV551911       <-- ATTATGGAAGGTTCTGAGAATTTCTTCATATGGATATCCAGGACTCAAAA
EV568219       <-- ATTATGGAAGGTTCTGAGAATTTCTTCATATGGATATCCAGGACTCAAAA
EV566419       <-- ATTATGGAAGGTCCTGAGAATTTCTTCATATGGATATCCGGGACTC....
EX897101       <-- ATTATGGAAGGTTCTGAGAATTTCTTCATATGGATATCCAGGACTCAAAA
EX746855       <-- ATTATGGAAGGTTCTGAGAATTTCTTCATATGGATACCCAGGACTCAAAA
EY948591       <-- ATTATGGAAGGTCCTGAGAATTTCTTCATATGGATATCCAGGACTCAAAA
EX903546       <-- ATTATGGAAGGTTCTGAGAATTTCTTCATATGGATATCCAGGACTCAAAA
FD563490       <-- ATTATGGAAGGTTCTGAGAATTTCTTCATATGGATATCCAGGACTCAAAA
FD570909       <-- ATTATGGAAGGTTCTGAGAATTTCTTCATATGGATATCCAGGACTCAAAA
FD562616       <-- ATTATGGAAGGTCCTGAGAATTTCTTCATATGGATATCCAGGACTCAAAA
FD532374       <-- ..................................................
FD574839       --> ..................................................
EV572677       --> ..................................................
EX900921       --> ..................................................
FD528869       --> ..................................................
FD567118       --> ..................................................
FD572715       --> ..................................................
EX907587       --> ..................................................
EY944265       --> ..................................................
EX751171       --> ..................................................
EV546928       --> ..................................................
EV571555       --> ..................................................
EV530640       --> ..................................................

               1051   -   1101
UN16361        --> ACAGCCTCAACCGGCTCAGCAGTAACTGAGCACCAGCAAGCTTGTTGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX895143       <-- ..................................................
FD577791       <-- ..................................................
EV526067       <-- ..................................................
FD568359       <-- ..................................................
EV551911       <-- ACAGCCTCAACCGGCTCAGCAGTAACTGAGCACCAGCAAGCTTGTTGTCC
EV568219       <-- ACAGCCTCAACCGGCTCAGCAGTAACTGAGCACCAGCAAGCTTGTTGTCC
EV566419       <-- ..................................................
EX897101       <-- ACAGCCTCAACCGGCTCAGCAGTAACTGAGCACCAGCAAGCTTGTTGTCC
EX746855       <-- ACAGCCTCAACCGGCTCAGCAGTAACTGAGCACCAGCAAGCTTGTTGTCC
EY948591       <-- ACAGCCTCAACCGGCTCAGCAGTAACTGAGCACCAGCAAGCTTGTTGTCC
EX903546       <-- ACAGCCTCAACCGGCTCAGCAGTAACTGAGCACCAGCAAGCTTGTTGTCC
FD563490       <-- ACAGCCTCAACCGGCTCAGCAGTAACTGAGCACCAGCAAGCTTGTTGTCC
FD570909       <-- ACAGCCTCAACCGGCTCAGCAGTAACTGAGCACCAGCAAGCTTGTTGTCC
FD562616       <-- ACAGCCTCAACCGGCTCAGCAGTAACTGAGCACCAGCAAGCTTGTTGTCC
FD532374       <-- ............................................TTGTCC
FD574839       --> ..................................................
EV572677       --> ..................................................
EX900921       --> ..................................................
FD528869       --> ..................................................
FD567118       --> ..................................................
FD572715       --> ..................................................
EX907587       --> ..................................................
EY944265       --> ..................................................
EX751171       --> ..................................................
EV546928       --> ..................................................
EV571555       --> ..................................................
EV530640       --> ..................................................

               1101   -   1151
UN16361        --> CAGCTAAACACACCATAGTACGGGCCACCCCAGAATGCACCAGCATGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX895143       <-- ..................................................
FD577791       <-- ..................................................
EV526067       <-- ..................................................
FD568359       <-- ..................................................
EV551911       <-- Cc................................................
EV568219       <-- Cc................................................
EV566419       <-- ..................................................
EX897101       <-- Cc................................................
EX746855       <-- CAGCTAAACACACCATAGTACGGGCCACCCCAGAACGCACCAGCATGCTT
EY948591       <-- CAGCTAAACACACCATAGTACGGGCCACCCCAGAACGCACCAGCATGCTT
EX903546       <-- CAGCTAAACACACCATAGTAGGGGCCACCCCAGAATGCACCAGCATGCTT
FD563490       <-- CAGCTAAACACACCATAGTACGGGCCACCCCAGAATGCACCAGCATGCTT
FD570909       <-- CAGCTAAACACACCATAGTACGGGCCACCCCAGAATGCACCAGCATGCTT
FD562616       <-- CAGCTAAACACACCATAGTACGGGCCACCCCAGAATGCACCAGCATGCTT
FD532374       <-- CAGCTAAACACACCATAGTAGGGGCCACCCCAGAATGCACCAGCATGCTT
FD574839       --> ..................................................
EV572677       --> ..................................................
EX900921       --> ..................................................
FD528869       --> ..................................................
FD567118       --> ..................................................
FD572715       --> ..................................................
EX907587       --> ..................................................
EY944265       --> ..................................................
EX751171       --> ..................................................
EV546928       --> ..................................................
EV571555       --> ..................................................
EV530640       --> ..................................................

               1151   -   1201
UN16361        --> CGCCATAGTTGGTTTTGTGATCAGATCGAGATAAGTCACGTTTCCTGTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX895143       <-- ..................................................
FD577791       <-- ..................................................
EV526067       <-- ..................................................
FD568359       <-- ..................................................
EV551911       <-- ..................................................
EV568219       <-- ..................................................
EV566419       <-- ..................................................
EX897101       <-- ..................................................
EX746855       <-- Cc................................................
EY948591       <-- CGCCATAGTTGGTTTTGTGATCAGATCAAGATAAGTCACGTTTCCTGTAG
EX903546       <-- CGCCATAGTTGGTTTTGTGATCAGATCGAGGTAAGTCACGTTTCCTGTAG
FD563490       <-- CGCCATAGTTGGTTTTGTGATCAGATCGAGATAAGTCACGTTTCCTGTAG
FD570909       <-- CGCCATAGTTGGTTTTGTGATCAGACCGAGATAAGTCACGTTTCCTGTAG
FD562616       <-- CGCCATAGTTGGTTTTGTGATCAGATCGAGATAAGTCACGTTTCCTGTAG
FD532374       <-- CGCCATAGTTGGTTTTGTGATCAGATCGAGATAAGTCACGTTTCCTGTAG
FD574839       --> ..................................................
EV572677       --> ..................................................
EX900921       --> ..................................................
FD528869       --> ..................................................
FD567118       --> ..................................................
FD572715       --> ..................................................
EX907587       --> ..................................................
EY944265       --> ..................................................
EX751171       --> ..................................................
EV546928       --> ..................................................
EV571555       --> ..................................................
EV530640       --> ..................................................

               1201   -   1251
UN16361        --> CGTAGTACAACCAAGCACCGCCCCAAATAAACTCATCCCAATACATGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX895143       <-- ..................................................
FD577791       <-- ..................................................
EV526067       <-- ..................................................
FD568359       <-- ..................................................
EV551911       <-- ..................................................
EV568219       <-- ..................................................
EV566419       <-- ..................................................
EX897101       <-- ..................................................
EX746855       <-- ..................................................
EY948591       <-- CGTAGTACAACCAc....................................
EX903546       <-- CGTAGTACAACCAAGCACCGCCCCAAATAAACTCATCCCAATACATGCTT
FD563490       <-- CGTAGTACAACCAAGCACCGCCCCAAATAAACTCATCCCAATACATGCTT
FD570909       <-- CGTAGTACAACCAAGCACCGCCCCAAATAAACTCATCCCGATACATGCTT
FD562616       <-- CGTAGTACAACCAAGCACCACCCCAAATAAACTCATCCCAATACATGCTT
FD532374       <-- CGTAGTACAACCAAGCACCGCCCCAAATAAACTCATCCCAATACATGCTT
FD574839       --> ..................................................
EV572677       --> ..................................................
EX900921       --> ..................................................
FD528869       --> ..................................................
FD567118       --> ..................................................
FD572715       --> ..................................................
EX907587       --> ..................................................
EY944265       --> ..................................................
EX751171       --> ..................................................
EV546928       --> ..................................................
EV571555       --> ..................................................
EV530640       --> ..................................................

               1251   -   1301
UN16361        --> GAGTTGTAGAACTTGGCTGATTCCGCAGTGCCTGCACTGTATCTGCCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX895143       <-- ..................................................
FD577791       <-- ..................................................
EV526067       <-- ..................................................
FD568359       <-- ..................................................
EV551911       <-- ..................................................
EV568219       <-- ..................................................
EV566419       <-- ..................................................
EX897101       <-- ..................................................
EX746855       <-- ..................................................
EY948591       <-- ..................................................
EX903546       <-- GAGTTGTAGAACTTGGCTGATTCCGCAGTGCCTGCACTGTATCTGCCTCT
FD563490       <-- GAGTTGTAGAACTTGGCTGATTCCGCAGTGCCTGCACTGTATCTGCCTCT
FD570909       <-- GAGTTGTAGAACTTGGCTGATTCCGCAGTGCCTGCACTGTATCTGCCTCT
FD562616       <-- GAGTTGTAGAACTTGGCTGATTCCGCAGTGCCTGCACTGTATCTGCCTCT
FD532374       <-- GAGTTGTAGAACTTGGCTGATTCCGCAGTGCCTGCACTGTATCTGCCTCT
FD574839       --> ..................................................
EV572677       --> ..................................................
EX900921       --> ..................................................
FD528869       --> ..................................................
FD567118       --> ..................................................
FD572715       --> ..................................................
EX907587       --> ..................................................
EY944265       --> ..................................................
EX751171       --> ..................................................
EV546928       --> ..................................................
EV571555       --> ..................................................
EV530640       --> ..................................................

               1301   -   1351
UN16361        --> CCTGGTCCTTCCAAACTGATACACCGTCTTAGCACCATGTACAAGCTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX895143       <-- ..................................................
FD577791       <-- ..................................................
EV526067       <-- ..................................................
FD568359       <-- ..................................................
EV551911       <-- ..................................................
EV568219       <-- ..................................................
EV566419       <-- ..................................................
EX897101       <-- ..................................................
EX746855       <-- ..................................................
EY948591       <-- ..................................................
EX903546       <-- CCTGGTCCc.........................................
FD563490       <-- CCTGGTCCTTCCAAACTGATACACCGTCTTAGCACCATGTACAAGCTTCT
FD570909       <-- CCTGGTCCTTCCAAACTGATACACCGTCTTAGCACCATGTACAAGCTTCT
FD562616       <-- CCTGGTCCTTCCAAACTGATACACCGTCTTAGCACCGTGTACAAGCTTCT
FD532374       <-- CCTGGTCCTTCCAAACTGATACACCGTCTTAGCACCATGTACAAGCTTCT
FD574839       --> ..................................................
EV572677       --> ..................................................
EX900921       --> ..................................................
FD528869       --> ..................................................
FD567118       --> ..................................................
FD572715       --> ..................................................
EX907587       --> ..................................................
EY944265       --> ..................................................
EX751171       --> ..................................................
EV546928       --> ..................................................
EV571555       --> ..................................................
EV530640       --> ..................................................

               1351   -   1401
UN16361        --> TAGAATAATCCTTGTTGTCCTTGAAGACAATGGAAGCAGAAGCCAGAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX895143       <-- ..................................................
FD577791       <-- ..................................................
EV526067       <-- ..................................................
FD568359       <-- ..................................................
EV551911       <-- ..................................................
EV568219       <-- ..................................................
EV566419       <-- ..................................................
EX897101       <-- ..................................................
EX746855       <-- ..................................................
EY948591       <-- ..................................................
EX903546       <-- ..................................................
FD563490       <-- TAGAATAATCCTTGTTGTCCTTGAAGACAATGGAAGCAGAAGCCAGAGCA
FD570909       <-- TAGAATAATCCTTGTTGTCCTTGAAGACAATGGAAGCAGAAGCCAGAGCA
FD562616       <-- TAGAATAATCCTTGTTGTCCTTGAAAACAATGGAAGCAGAAGCCAGAGCA
FD532374       <-- TAGAATAATCCTTGTTGTCCTTGAAGACAATGGAAGCAGAAGCCAGAGCA
FD574839       --> ..................................................
EV572677       --> ..................................................
EX900921       --> ..................................................
FD528869       --> ..................................................
FD567118       --> ..................................................
FD572715       --> ..................................................
EX907587       --> ..................................................
EY944265       --> ..................................................
EX751171       --> ..................................................
EV546928       --> ..................................................
EV571555       --> ..................................................
EV530640       --> ..................................................

               1401   -   1451
UN16361        --> GCCGCCATCTCCGCAGCGAGATCCGAGCATCCACCATTACAGGTAGTCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX895143       <-- ..................................................
FD577791       <-- ..................................................
EV526067       <-- ..................................................
FD568359       <-- ..................................................
EV551911       <-- ..................................................
EV568219       <-- ..................................................
EV566419       <-- ..................................................
EX897101       <-- ..................................................
EX746855       <-- ..................................................
EY948591       <-- ..................................................
EX903546       <-- ..................................................
FD563490       <-- GCCGCCATCTCCGCAGC.................................
FD570909       <-- GCCGCCATCTCCGCAGCGAGATCCGAGCATCCACCATTACAGGTc.....
FD562616       <-- GCCGCCATCTCCGCGGCGAGATCCGAGCATCCACCATTACAGGTAGTCAC
FD532374       <-- GCCGCCATCTCCGCAGCGAGATCCGAGCATCCACCATTACAGGTAGTCGC
FD574839       --> ..................................................
EV572677       --> ..................................................
EX900921       --> ..................................................
FD528869       --> ..................................................
FD567118       --> ..................................................
FD572715       --> ..................................................
EX907587       --> ..................................................
EY944265       --> ..................................................
EX751171       --> ..................................................
EV546928       --> ..................................................
EV571555       --> ..................................................
EV530640       --> ..................................................

               1451   -   1501
UN16361        --> AGGCCTTTTGTAGTCCATGTCCTCAGGCCTCATCCAGCAGTAATGGTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX895143       <-- ..................................................
FD577791       <-- ..................................................
EV526067       <-- ..................................................
FD568359       <-- ..................................................
EV551911       <-- ..................................................
EV568219       <-- ..................................................
EV566419       <-- ..................................................
EX897101       <-- ..................................................
EX746855       <-- ..................................................
EY948591       <-- ..................................................
EX903546       <-- ..................................................
FD563490       <-- ..................................................
FD570909       <-- ..................................................
FD562616       <-- AGGCCTTTTGTAGTCCATGTCCTCAGGCCGCATCCAGCAGTAATGGTCAT
FD532374       <-- AGGCCTTTTATAGTCCATGTCCTCAGGCCTCATCCAGCAGTAATGGTCAT
FD574839       --> ..................................................
EV572677       --> ..................................................
EX900921       --> ..................................................
FD528869       --> ..................................................
FD567118       --> ..................................................
FD572715       --> ..................................................
EX907587       --> ..................................................
EY944265       --> ..................................................
EX751171       --> ..................................................
EV546928       --> ..................................................
EV571555       --> ..................................................
EV530640       --> ..................................................

               1501   -   1551
UN16361        --> TAGGATCCGTACTTCCATCGTCAGTATTTCCAGATCCAACCTGTGAGACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX895143       <-- ..................................................
FD577791       <-- ..................................................
EV526067       <-- ..................................................
FD568359       <-- ..................................................
EV551911       <-- ..................................................
EV568219       <-- ..................................................
EV566419       <-- ..................................................
EX897101       <-- ..................................................
EX746855       <-- ..................................................
EY948591       <-- ..................................................
EX903546       <-- ..................................................
FD563490       <-- ..................................................
FD570909       <-- ..................................................
FD562616       <-- TAGGATCCGTACTTCCATCGTCAGTATTTCCAGATCCAACCTGTGAGACC
FD532374       <-- TAGGATCCGTACTTCCATCGTCAGTATTTCCAGATCCAACCTGTGAGACC
FD574839       --> ..................................................
EV572677       --> ..................................................
EX900921       --> ..................................................
FD528869       --> ..................................................
FD567118       --> ..................................................
FD572715       --> ..................................................
EX907587       --> ..................................................
EY944265       --> ..................................................
EX751171       --> ..................................................
EV546928       --> ..................................................
EV571555       --> ..................................................
EV530640       --> ..................................................

               1551   -   1601
UN16361        --> AGATCATTGATGGAATCAGCAGTGCTATTAAAGGTCTTGAGAAAGTAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX895143       <-- ..................................................
FD577791       <-- ..................................................
EV526067       <-- ..................................................
FD568359       <-- ..................................................
EV551911       <-- ..................................................
EV568219       <-- ..................................................
EV566419       <-- ..................................................
EX897101       <-- ..................................................
EX746855       <-- ..................................................
EY948591       <-- ..................................................
EX903546       <-- ..................................................
FD563490       <-- ..................................................
FD570909       <-- ..................................................
FD562616       <-- AGATCATTGATGGAATCAGCAGTGCTATTAAAGGTCTTGAGAAAGTAATC
FD532374       <-- AGATCATTGc........................................
FD574839       --> ..................................................
EV572677       --> ..................................................
EX900921       --> ..................................................
FD528869       --> ..................................................
FD567118       --> ..................................................
FD572715       --> ..................................................
EX907587       --> ..................................................
EY944265       --> ..................................................
EX751171       --> ..................................................
EV546928       --> ..................................................
EV571555       --> ..................................................
EV530640       --> ..................................................

               1601   -   1651
UN16361        --> AGTTCCCCACTTGATC
                   ~~~~~~~~~~~~~~~~
EX895143       <-- ................
FD577791       <-- ................
EV526067       <-- ................
FD568359       <-- ................
EV551911       <-- ................
EV568219       <-- ................
EV566419       <-- ................
EX897101       <-- ................
EX746855       <-- ................
EY948591       <-- ................
EX903546       <-- ................
FD563490       <-- ................
FD570909       <-- ................
FD562616       <-- AGTTCCCCACTTGATC
FD532374       <-- ................
FD574839       --> ................
EV572677       --> ................
EX900921       --> ................
FD528869       --> ................
FD567118       --> ................
FD572715       --> ................
EX907587       --> ................
EY944265       --> ................
EX751171       --> ................
EV546928       --> ................
EV571555       --> ................
EV530640       --> ................