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Alignment for radish unigene UN16404

               1      -     51
UN16404        --> AATTATTCAACAGTTAATTTATCATATTTTGCATAAGCAACTATAAGTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530949       <-- ..................................................
EX891064       <-- ..................................................
FD952818       <-- ..................................................
EY910251       <-- ..................................................
FD545290       <-- ..................................................
EY910078       <-- ..................................................
FD959890       <-- ..................................................
FY439968       --> AATTATTCAACAGTTAATTTATCATATTTTGCATAAGCAACTATAAGTTA
EV526482       --> ..................................................
EY914149       --> ..................................................
FD564219       --> ..................................................
FD957055       --> ..................................................
FD963647       --> ..................................................
FD549203       --> ..................................................
FD981561       --> ..................................................
EY913936       --> ..................................................

               51     -    101
UN16404        --> AAACGACATCCTGTTCTAATTTATAATATATAAACGACACGATTGGTAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530949       <-- ..................................................
EX891064       <-- ..................................................
FD952818       <-- ..................................................
EY910251       <-- ..................................................
FD545290       <-- ..................................................
EY910078       <-- ..................................................
FD959890       <-- ..................................................
FY439968       --> AAACGACATCCTGTTCTAATTTATAATATATAAACGACACGATTGGTAAC
EV526482       --> ..................................................
EY914149       --> ..................................................
FD564219       --> ..................................................
FD957055       --> ..................................................
FD963647       --> ..................................................
FD549203       --> ..................................................
FD981561       --> ..................................................
EY913936       --> ..................................................

               101    -    151
UN16404        --> TTGACAAAGGCCTTATCTTTTCTCCAAACCTCTCACTCGTGGAAGCTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530949       <-- ........................................GGAAGCTCAA
EX891064       <-- ........................................GGAAGCTCAA
FD952818       <-- ........................................GGAAGCTCAA
EY910251       <-- ..................................................
FD545290       <-- ..................................................
EY910078       <-- ..................................................
FD959890       <-- ..................................................
FY439968       --> TTGACAAAGGCCTTATCTTTTCTCCAAACCTCTCACTCGTTTAAGCTCAA
EV526482       --> ........................................GGAAGCTCAA
EY914149       --> ........................................GGAAGCTCAA
FD564219       --> ........................................GGAAGCTCAA
FD957055       --> ........................................GGAAGCTCAA
FD963647       --> ........................................GGAAGCTCAA
FD549203       --> ..................................................
FD981561       --> ..................................................
EY913936       --> ..................................................

               151    -    201
UN16404        --> AAAACCAATGGCTTCCACACTTCTTGTTCCTCAACTTCTCTCTTCGCCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530949       <-- AAAACCAATGGCTTCCACACTTCTTGTTCCTCAACTTCTCTCTTCGCCTA
EX891064       <-- AAAACCAATGGCTTCCACACTTCTTGTTCCTCAACTTCTCTCTTCGCCTA
FD952818       <-- AAAACCAATGGCTTCCACACTTCTTGTTCCTCAACTTCTCTCTTCGCCTA
EY910251       <-- ..................................................
FD545290       <-- ..................................................
EY910078       <-- ..................................................
FD959890       <-- ..................................................
FY439968       --> AAAACCAATGGCTTCCACACTTCTTGTTCCTCAACTTCTCTCTTCGCCTA
EV526482       --> AAAACCAATGGCTTCCACACTTCTTGTTCCTCAACTTCTCTCTTCGCCTA
EY914149       --> AAAACCAATGGCTTCCACACTTCTTGTTCCTCAACTTCTCTCTTCGCCTA
FD564219       --> AAAACCAATGGCTTCCACACTTCTTGTTCCTCAACTTCTCTCTTCGCCTA
FD957055       --> AAAACCAATGGCTTCCACACTTCTTGTTCCTCAACTTCTCTCTTCGCCTA
FD963647       --> AAAACCAATGGCTTCCACACTTCTTGTTCCTCAACTTCTCTCTTCGCCTA
FD549203       --> ....ggAATGGCTTCCACACTTCTTGTTCCTCAACTTCTCTCTTCGCCTA
FD981561       --> ..................................................
EY913936       --> ..................................................

               201    -    251
UN16404        --> CGTATCTCAAAAGAACCTATACCTTCAACACTCGTCGAACAGTGAAGTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530949       <-- CGTATCTCAAAAGAACCTATACCTTCAACACTCGTCGAACAGTGAAGTGC
EX891064       <-- CGTATCTCAAAAGAACCTATACCTTCAACACTCGTCGAACAGTGAAGTGC
FD952818       <-- CGTATCTCAAAAGAACCTATACCTTCAACACTCGTCGAACAGTGAAGTGC
EY910251       <-- ...ATCTCAAAAGAACCTATACCTTCAACACTCGTCGAACAGTGAAGTGC
FD545290       <-- ..................ATACCTTCAACACTCGTCGAACAGTGAAGTGC
EY910078       <-- ....................................GAACAGTGAAGTGC
FD959890       <-- ..................................................
FY439968       --> CGTATCTCAAAAGAACCTATACCTTCAACACTCGTCGAACAGTGAAGTGC
EV526482       --> CGTATCTCAAAAGAACCTATACCTTCAACACTCGTCGAACAGTGAAGTGC
EY914149       --> CGTATCTCAAAAGAACCTATACCTTCAACACTCGTCGAACAGTGAAGTGC
FD564219       --> CGTATCTCAAAAGAACCTATACCTTCAACACTCGTCGAACAGTGAAGTGC
FD957055       --> CGTATCTCAAAAGAACCTATACCTTCAACACTCGTCGAACAGTGAAGTGC
FD963647       --> CGTATCTCAAAAGAACCTATACCTTCAACACTCGTCGAACAGTGAAGTGC
FD549203       --> CGTATCTCAAAAGAACCTATACCTTCAACACTCGTCGAACAGTGAAGTGC
FD981561       --> ...........................aggCTCGTCGAACAGTGAAGTGC
EY913936       --> ....................................GAACAGTGAAGTGC

               251    -    301
UN16404        --> TCTTCAAACCCAGAACCAAAAGATCAGTTCCTCGAGCTCACACCTTCACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530949       <-- TCTTCAAACCCAGAACCAAAAGATCAGTTCCTCGAGCTCACACCTTCACC
EX891064       <-- TCTTCAAACCCAGAACCAAAAGATCAGTTCCTCGAGCTCACACCTTCACC
FD952818       <-- TCTTCAAACCCAGAACCAAAAGATCAGTTCCTCGAGCTCACACCTTCACC
EY910251       <-- TCTTCAAACCCAGAACCAAAAGATCAGTTCCTCGAGCTCACACCTTCACC
FD545290       <-- TCTTCAAACCCAGAACCAAAAGATCAGTTCCTCGAGCTCACACCTTCACC
EY910078       <-- TCTTCAAACCCAGAACCAAAAGATCAGTTCCTCGAGCTCACACCTTCACC
FD959890       <-- ..................................................
FY439968       --> TCTTCAAACCCAGAACCAAAAGATCAGTT.....................
EV526482       --> TCTTCAAACCCAGAACCAAAAGATCAGTTCCTCGAGCTCACACCTTCACC
EY914149       --> TCTTCAAACCCAGAACCAAAAGATCAGTTCCTCGAGCTCACACCTTCACC
FD564219       --> TCTTCAAACCCAGAACCAAAAGATCAGTTCCTCGAGCTCACACCTTCACC
FD957055       --> TCTTCAAACCCAGAACCAAAAGATCAGTTCCTCGAGCTCACACCTTCACC
FD963647       --> TCTTCAAACCCAGAACCAAAAGATCAGTTCCTCGAGCTCACACCTTCACC
FD549203       --> TCTTCAAACCCAGAACCAAAAGATCAGTTCCTCGAGCTCACACCTTCACC
FD981561       --> TCTTCAAACCCAGAACCAAAAGATCAGTTCCTCGAGCTCACACCTTCACC
EY913936       --> TCTTCAAACCCAGAACCAAAAGATCAGTTCCTCGAGCTCACACCTTCACC

               301    -    351
UN16404        --> CGACTCAATCAACACCACGAGCGCCGAGAAGTTCCCCATCGAGAAACGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530949       <-- CGACTCAATCAACACTACGAGCGCCGAGAAGTTCCCCATCGAGAAACGTC
EX891064       <-- CGACTCAATCAACACCACGAGCGCCGAGAAGTTCCCCATCGAGAAACGTC
FD952818       <-- CGACTCAATCAACACCACGAGCGCCGAGAAGTTCCCCATCGAGAAACGTC
EY910251       <-- CGACTCAATCAACACCACGAGCGCCGAGAAGTTCCCCATCGAGAAACGTC
FD545290       <-- CGACTCAATCAACACCACGAGCGCCGAGAAGCTCCCCATCGAGAAACGTC
EY910078       <-- CGACTCAATCAACACCACGAGCGCCGAGAAGTTCCCCATCGAGAAACGTC
FD959890       <-- ..................................................
FY439968       --> ..................................................
EV526482       --> CGACTCAATCAACACTACGAGCGCCGAGAAGTTCCCCATCGAGAAACGTC
EY914149       --> CGACTCAATCAACACCACGAGCGCCGAGAAGTTCCCCATCGAGAAACGTC
FD564219       --> CGACTCAATCAACACCACGAGCGCCGAGAAGTTCCCCATCGAGAA-CGTC
FD957055       --> CGACTCAATCAACACCACGAGCGCCGAGAAGTTCCCCATCGAGAAACGTC
FD963647       --> CGACTCAATCAACACTACGAGCGCCGAGAAGTTCCCCATCGAGAAACGTC
FD549203       --> CGACTCAATCAACACCACGAGCGCCGAGAAGCTCCCCATCGAGAAACGTC
FD981561       --> CGACTCAATCAACACCACGAGCGCCGAGAAGTTCCCCATCGAGAAACGTC
EY913936       --> CGACTCAATCAACACCACGAGCGCCGAGAAGTTCCCCATCGAGAAACGTC

               351    -    401
UN16404        --> GAAGATCCGAGATCATACGCGACAGGAAACAAAGAGGGATCGAGAAGCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530949       <-- GAAGATCCGAGATCATACGCGACAGGAAACAAAGAGGGATCGAGAAGCCG  Raphanus raphanistrum subsp. maritimus
EX891064       <-- GAAGATCCGAGATCATACGCGACAGGAAACAAAGAGGGATCGAGAAGCCA  Raphanus sativus var. oleiformis
FD952818       <-- GAAGATCCGAGATCATACGCGACAGGAAACAAAGAGGGATCGAGAAGCCG  Raphanus sativus cv Rat-Tail Radish #3870
EY910251       <-- GAAGATCCGAGATCATACGCGACAGGAAACAAAGAGGGATCGAGAAGCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD545290       <-- GAAGATCCGAGATCATACGCGACAGGAAACAAAGAGGGATCGAGAAGCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY910078       <-- GAAGATCCGAGATCATACGCGACAGGAAACAAAGAGGGATCGAGAAGCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD959890       <-- .AAGATCCGAGATCATACGCGACAGGAAACAAAGAGGGATCGAGAAGCCG  Raphanus raphanistrum subsp. maritimus
FY439968       --> ..................................................  Raphanus sativus cv GSK3-1
EV526482       --> GAAGATCCGAGATCATACGCGACAGGAAACAAAGAGGGATCGAGAAGCCG  Raphanus raphanistrum subsp. maritimus
EY914149       --> GAAGATCCGAGATCATACGCGACAGGAAACAAAGAGGGATCGAGAAGCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD564219       --> GAAGATCCGAGATCATACGCGACAGGAAACAAAGAGGGATCGAGAAGCCA  Raphanus sativus var. oleiformis
FD957055       --> GAAGATCCGAGATCATACGCGACAGGAAACAAAGAGGGATCGAGAAGCCG  Raphanus sativus cv Rat-Tail Radish #3870
FD963647       --> GAAGATCCGAGATCATACGCGACAGGAAACAAAGAGGGATCGAGAAGCCG  Raphanus raphanistrum subsp. maritimus
FD549203       --> GAAGATCCGAGATCATACGCGACAGGAAACAAAGAGGGATCGAGAAGCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981561       --> GAAGATCCGAGATCATACGCGACAGGAAACAAAGAGGGATCGAGAAGCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY913936       --> GAAGATCCGAGATCATACGCGACAGGAAACAAAGAGGGATCGAGAAGCCA  Raphanus raphanistrum subsp. raphanistrum (NY)

               401    -    451
UN16404        --> GAGCCACCGAACTTCGAGATTGGGTGGAAGAGAACGAAAGAGATAAACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530949       <-- GAGCCACCGAACTTCGAGATCGGGTGGAAGAGAACGAAAGAGATAAACTT  Raphanus raphanistrum subsp. maritimus
EX891064       <-- GAGCCACCGAACTTCGAGATTGGCTGGAAGAGAACGAAAG-GATAAACTT  Raphanus sativus var. oleiformis
FD952818       <-- GAGCCACCGAACTTCGAGATTGGGTGGAAGAGAACGAAAGAGATAAACTT  Raphanus sativus cv Rat-Tail Radish #3870
EY910251       <-- GAGCCACCGAACTTCGAGATTGGGTGGAAGAGAACGAAAGAGATAAACTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD545290       <-- GAGCCACCGAACTTCGAGATTGGCTGGAAGAGAACGAAAGAGATAAACTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY910078       <-- GAGCCACCGAACTTCGAGATTGGCTGGAAGAGAACGAAAGAGATAAACTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD959890       <-- GAGCCACCGAACTTCGAGATCGGGTGGAAGAGAACGAAAGAGATAAACTT  Raphanus raphanistrum subsp. maritimus
FY439968       --> ..................................................  Raphanus sativus cv GSK3-1
EV526482       --> GAGCCACCGAACTTCGAGATCGGGTGGAAGAGAACGAAAGAGATAAACTT  Raphanus raphanistrum subsp. maritimus
EY914149       --> GAGCCACCGAACTTCGAGATTGGGTGGAAGAGAACGAAAGAGATAAACTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD564219       --> GAGCCACCGAACTTCGAGATTGGCTGGAAGAGAACGAAAGAGATAAACTT  Raphanus sativus var. oleiformis
FD957055       --> GAGCCACCGAACTTCGAGATTGGGTGGAAGAGAACGAAAGAGATAAACTT  Raphanus sativus cv Rat-Tail Radish #3870
FD963647       --> GAGCCACCGAACTTCGAGATCGGGTGGAAGAGAACGAAAGAGATAAACTT  Raphanus raphanistrum subsp. maritimus
FD549203       --> GAGCCACCGAACTTCGAGATTGGCTGGAAGAGAACGAAAGAGATAAACTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981561       --> GAGCCACCGAACTTCGAGATTGGGTGGAAGAGAACGAAAGAGATAAACTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY913936       --> GAGCCACCGAACTTCGAGATTGGCTGGAAGAGAACGAAAGAGATAAACTT  Raphanus raphanistrum subsp. raphanistrum (NY)

               451    -    501
UN16404        --> GGAGAAACCAAAAGGGTACGTGATAATGGACTTCTTGGAGAAGTTCGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530949       <-- GGAGAAACCAAAAGGGTACGTGATAATGGACTTCTTGGAGAAGTTCGAAG
EX891064       <-- GGAGAAACCAAAAGGGTACGTGATAATGGACTTCTTGGAGAAGTTCGAAG
FD952818       <-- GGAGAAACCAAAAGGGTACGTGATAATGGACTTCTTGGAGAAGTTCGAAG
EY910251       <-- GGAGAAACCAAAAGGGTACGTGATAATGGACTTCTTGGAGAAGTTCGAAG
FD545290       <-- GGAGAAACCAAAAGGGTACGTGGTAATGGACTTCTTGGAGAAGTTCGAAG
EY910078       <-- GGAGAAACCAAAAGGGTACGTGATAATGGACTTCTTGGAGAAGTTCGAAG
FD959890       <-- GGAGAAACCAAAGGGGTACGTGATAATGGACTTCTTGGAGAAGTTCGAAG
FY439968       --> ..................................................
EV526482       --> GGAGAAACCAAAAGGGTACGTGATAATGGACTTCTTGGAGAAGTTCGAAG
EY914149       --> GGAGAAACCAAAAGGGTACGTGATAATGGACTTCTTGGAGAAGTTCGAAG
FD564219       --> GGAGAAACCAAAAGGGTACGTGATAATGGACTTCTTGGAGAAGTTCGAAG
FD957055       --> GGAGAAACCAAAAGGGTACGTGATAATGGACTTCTTGGAGAAGTTCGAAG
FD963647       --> GGAGAAACCAAAAGGGTACGTGATAATGGACTTCTTGGAGAAGTTCGAAG
FD549203       --> GGAGAAACCAAAAGGGTACGTGGTAATGGACTTCTTGGAGAAGTTCGAAG
FD981561       --> GGAGAAACCAAAAGGGTACGTGATAATGGACTTCTTGGAGAAGTTCGAAG
EY913936       --> GGAGAAACCAAAAGGGTACGTGATAATGGACTTCTTGGAGAAGTTCGAAG

               501    -    551
UN16404        --> GGTTGATGGCGAGAGAGTTCGGTTCCAAGGAGCTTTTGGCTAAAGCTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530949       <-- GGTTGATGGCGAGAGAGTTCGGTTCCAAGGAGCTTTTGGCTAAAGCTGGT
EX891064       <-- GGTTGATGGCGAGAGAGTTCGGTTCCAAGGAGCTTTTGGCTAAAGCTGGT
FD952818       <-- GGTTGATGGCGAGAGAGTTCGGTTCCAAGGAGCTTTTGGCTAAAGCTGGT
EY910251       <-- GGTTGATGGCGAGAGAGTTCGGTTCCAAGGAGCTTTTGGCTAAAGCTGGT
FD545290       <-- GGTTGACGGCGAGAGAGTTCGGTTCCAAGGAGCTTTTGGCTAAAGCTGGT
EY910078       <-- GGTTGATGGCGAGAGAGTTCGGTTCCAAGGAGCTTTTGGCTAAAGCTGGT
FD959890       <-- GGTTGATGGCGAGAGAGTTCGGTTCCAAGGAGCTTTTGGCTAAAGCTGGT
FY439968       --> ..................................................
EV526482       --> GGTTGATGGCGAGAGAGTTCGGTTCCAAGGAGCTTTTGGCTAAAGCTGGT
EY914149       --> GGTTGATGGCGAGAGAGTTCGGTTCCAAGGAGCTTTTGGCTAAAGCTGGT
FD564219       --> GGTTGATGGCGAGAGAGTTCGGTTCCAAGGAGCTTTTGGCTAAAGCTGGT
FD957055       --> GGTTGATGGCGAGAGAGTTCGGTTCCAAGGAGCTTTTGGCTAAAGCTGGT
FD963647       --> GGTTGATGGCGAGAGAGTTCGGTTCCAAGGAGCTTTTGGCTAAAGCTGGT
FD549203       --> GGTTGACGGCGAGAGAGTTCGGTTCCAAGGAGCTTTTGGCTAAAGCTGGT
FD981561       --> GGTTGATGGCGAGAGAGTTCGGTTCCAAGGAGCTTTTGGCTAAAGCTGGT
EY913936       --> GGTTGATGGCGAGAGAGTTCGGTTCCAAGGAGCTTTTGGCTAAAGCTGGT

               551    -    601
UN16404        --> GAGATAGTCGCGGAGAGAGCGAGGGAAGAAGCTGAGGTTCTGAGAGACGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530949       <-- GAGATAGTTGCGGAGAGAGCGAGGGAAGAGGCTGAGGTTCTGAGAGACGA  Raphanus raphanistrum subsp. maritimus
EX891064       <-- GAGATAGTCGCGGAGAGAGCTAGAGAAGAAGCTGAGGTTCTGAGAGACGA  Raphanus sativus var. oleiformis
FD952818       <-- GAGATAGTCGCGGAGAGAGCGAGGGAAGAAGCTGAGGTTCTGAGAGATGA  Raphanus sativus cv Rat-Tail Radish #3870
EY910251       <-- GAGATAGTCGCGGAGAGAGCGAGGGAAGAAGCTGAGGTTCTGAGAGATGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD545290       <-- GAGATAGTCGCGGAGAGAGCTAGAGAAGAAGCTGAGGTTCTGAGAGACGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY910078       <-- GAGATAGTCGCGGAGAGAGCTAGAGAAGAAGCTGAGGTTCTGAGAGACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD959890       <-- GAGATAGTTGCGGAGAGAGCGAGGGAAGAGGCTGAGGTTCTGAGAGACGA  Raphanus raphanistrum subsp. maritimus
FY439968       --> ..................................................  Raphanus sativus cv GSK3-1
EV526482       --> GAGATAGTTGCGGAGAGAGCGAGGGAAGAGGCTGAGGTTCTGAGAGACGA  Raphanus raphanistrum subsp. maritimus
EY914149       --> GAGATAGTCGCGGAGAGAGCGAGGGAAGAAGCTGAGGTTCTGAGAGATGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD564219       --> GAGATAGTCGCGGAGAGAGCGAGGGAAGAAGCTGAGGTTCTGAGAGACGA  Raphanus sativus var. oleiformis
FD957055       --> GAGATAGTCGCGGAGAGAGCGAGGGAAGAAGCTGAGGTTCTGAGAGATGA  Raphanus sativus cv Rat-Tail Radish #3870
FD963647       --> GAGATAGTTGCGGAGAGAGCGAGGGAAGAGGCTGAGGTTCTGAGAGACGA  Raphanus raphanistrum subsp. maritimus
FD549203       --> GAGATAGTCGCGGAGAGAGCTAGAGAAGAAGCTGAGGTTCTGAGAGACGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981561       --> GAGATAGTCGCGGAGAGAGCGAGGGAAGAAGCTGAGGTTCTGAGAGATGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY913936       --> GAGATAGTCGCGGAGAGAGCTAGAGAAGAAGCTGAGGTTCTGAGAGACAA  Raphanus raphanistrum subsp. raphanistrum (NY)

               601    -    651
UN16404        --> AGGTGAGGTTGAAGAGAGGATGGTGACTGAGCTTTTTAGGGTTTTGAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530949       <-- AGGTGAGGTTGAAGAGAGGATGGTGACTGAGCTTTTCAGGGTTTTGAAGT  Raphanus raphanistrum subsp. maritimus
EX891064       <-- AGGTGAGGTTGAAGAGAGGATGGTGACTGAGCTTTTTAGGGTTTTGAAGC  Raphanus sativus var. oleiformis
FD952818       <-- CGGTGAAGTTGAAGAGAGGATGGTGACTGAGCTTTTTAGGGTTTTGAAGT  Raphanus sativus cv Rat-Tail Radish #3870
EY910251       <-- CGGTGAAGTTGAAGAGAGGATGGTGACTGAGCTTTTTAGGGTTTTGAAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD545290       <-- AGGTGAGGTTGAAGAGAGGATGGTGACTGAGCTTTTTAGGGTTTTGAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY910078       <-- AGGTGAGGTTGAAGAGAGGATGGTGACTGAGCTTTTTAGGGTTTTGAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD959890       <-- AGGTGAGGTTGAAGAGAGGATGGTGACTGAGCTTTTCAGGGTTTTGAAGT  Raphanus raphanistrum subsp. maritimus
FY439968       --> ..................................................  Raphanus sativus cv GSK3-1
EV526482       --> AGGTGAGGTTGAAGAGAGGATGGTGACTGAGCTTTTCAGGGTTTTGAAGT  Raphanus raphanistrum subsp. maritimus
EY914149       --> CGGTGAAGTTGAAGAGAGGATGGTGACTGAGCTTTTTAGGGTTTTGAAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD564219       --> AGGTGAGGTTGAAGAGAGGATGGTGACTGAACTTT...............  Raphanus sativus var. oleiformis
FD957055       --> CGGTGAAGTTGAAGAGAGGATGGTGACTGAGCTTTTTAGGGTTTTGAAGT  Raphanus sativus cv Rat-Tail Radish #3870
FD963647       --> AGGTGAGGTTGAAGAGAGGATGGTGACTGAGCTTTTCAGGGTTTTGAAGT  Raphanus raphanistrum subsp. maritimus
FD549203       --> AGGTGAGGTTGAAGAGAGGATGGTGACTGAGCTTTTTAGGGTTTTGAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981561       --> CGGTGAAGTTGAAGAGAGGATGGTGACTGAGCTTTTTAGGGTTTTGAAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY913936       --> AGGTGAGGTTGAAGAGAGGATGGTGACTGAGCTTTTTAGGGTTTTGAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)

               651    -    701
UN16404        --> TGATGGAGATGGATTTGGCTATGGTTAAAGCTTCGGTTAAGGAAGAGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530949       <-- TGATGGAGATGGATTTGGCTATGGTTAAAGCCTCGGTTAAGGAAGAGACT
EX891064       <-- TGATGGAGATGGATTTGGCTATGGTTAAAGCTTCGGTTAAGGAAGAGACT
FD952818       <-- TGATGGAGATGGATTTGGCTATGGTTAAAGCTTCGGTTAAGGAAGAGACT
EY910251       <-- TGATGGAGATGGATTTGGCTATGGTTAAAGCTTCGGTTAAGGAAGAGACT
FD545290       <-- TGATGGAGATGGATTTGGCTATGGTTAAAGCTTCGGTTAAGGAAGAGACT
EY910078       <-- TGATGGAGATGGATTTGGCTATGGTTAAAGCTTCGGTTAAGGAAGAGACT
FD959890       <-- TGATGGAGATGGATTTGGCTATGGTTAAAGCTTCGGTTAAGGAAGAGACT
FY439968       --> ..................................................
EV526482       --> TGATGGAGATGGATTTGGCTATGGTTAAAGCCTCGGTTAAGGAAGAGACT
EY914149       --> TGATGGAGATGGATTTGGCTATGGTTAAAGCTTCGGTTAAGGAAGAGACT
FD564219       --> ..................................................
FD957055       --> TGATGGAGATGGATTTGGCTATGGTTAAAGCTTCGGTTAAGGAAGAGACT
FD963647       --> TGATGGAGATGGATTTGGCTATGGTTAAAGCTTCGGTTAAGGAAGAGACT
FD549203       --> TGATGGAGATGGATTTGGCTATGGTTAAAGCTTCGGTTAAGGAAGAGACT
FD981561       --> TGATGGAGATGGATTTGGCTATGGTTAAAGCTTCGGTTAAGGAAGAGACT
EY913936       --> TGATGGAGATGGATTTGGCTATGGTTAAAGCTTCGGTTAAGGAAGAGACT

               701    -    751
UN16404        --> CTTAGTGAGAGGATTGAACAAGCTAGAGCTAGATGTAGACAAGCTATTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530949       <-- CTTAGTGAGAGGATTGAACAAGCTGGAGCTAGATGTAGACAAGCTATTCT
EX891064       <-- CTTAGTGAGAGGATTGAACAAGCTAGAGCTAGATGTAGACAAGCTATTCT
FD952818       <-- CTTAGTGAGAGGATTGAACAAGCTAGAGCTAGATGTAGACAAGCTATTCT
EY910251       <-- CTTAGTGAGAGGATTGAACAAGCTAGAGCTAGATGTAGACAAGCTATTCT
FD545290       <-- CTTAGTGAGAGGATTGAACAAGCTAGAGCTAGATGTAGACAAGCTATTCT
EY910078       <-- CTTAGTGAGAGGATTGAACAAGCTAGAGCTAGATGTAGACAAGCTATTCT
FD959890       <-- CTTAGTGAGAGGATTGAACAAGCTAGAGCTAGATGCAGACAAGCTATTCT
FY439968       --> ..................................................
EV526482       --> CTTAGTGAGAGGATTGAACAAGCTGGAGCTAGATGTAGACAAGCTATTCT
EY914149       --> CTTAGTGAGAGGATTGAACAAGCTAGAGCTAGATGTAGACAAGCTATTCT
FD564219       --> ..................................................
FD957055       --> CTTAGTGAGAGGATTGAACAAGCTAGAGCTAGATGTAGACAAGCTATTCT
FD963647       --> CTTAGTGAGAGGATTGAACAAGCTAGAGCTAGATGCAGACAAGCTATTCT
FD549203       --> CTTAGTGAGAGGATTGAACAAGCTAGAGCTAGATGTAGACAAGCTATTCT
FD981561       --> CTTAGTGAGAGGATTGAACAAGCTAGAGCTAGATGTAGACAAGCTATTCT
EY913936       --> CTTAGTGAGAGGATTGAACAAGCTAGAGCTAGATGTAGACAAGCTATTCT

               751    -    801
UN16404        --> TGTTGCTAATTCTTTTTAAGACCTACCCAATCTGTAAAAGATCTTAACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530949       <-- TGTTGCTAATTCTTTTTAAGACCTACCCAATCTGTAAAAGATCTTAACTT
EX891064       <-- TTTTGCTAATTCTTTTTAAGACCTACCCAATCTGTAAAAGATCTTAACTT
FD952818       <-- TGTTGCTAATTCTTTTTAAGACCTACCCAATCTGTAAAAGATCTTAACTT
EY910251       <-- TGTTGCTAATTCTTTTTAAGACCTACCCAATCTGCAAAAGATCTTAACTT
FD545290       <-- TGTTGCTAATTCTTTTTAAGACCTACCCAATCTGTAAAAGATCTTAACTT
EY910078       <-- TGTTGCTAATTCTTTTTAAGACCTACCCAATCTGTAAAAGATCTTAACTT
FD959890       <-- TGTTGCTAATTCTTTTTAAGACCTACCCAATCTGTAAAAGATCTTAACTT
FY439968       --> ..................................................
EV526482       --> TGTTGCTAATTCTTTTTAAGACCTACCCAATCTGTAAAAGATCTTAACTT
EY914149       --> TGTTGCTAATTCTTTTTAAGACCTACCCAATCTGCAAAAGATCTTAACTT
FD564219       --> ..................................................
FD957055       --> TGTTGCTAATTCTTTTTAAGACCTACCCAATCTGTAAAAGATCTTAACTT
FD963647       --> TGTTGCTAATTCTTTTTAAGACCTACCCAATCTGTAAAAGATCTTAACT.
FD549203       --> TGTTGCTAATTCTTTTTAAGACCTACCCAATCTGTAAA-GATCTTA....
FD981561       --> TGTTGCTAATTCTTTTTAAGACCTACCCAATCTGTAAAAGATCTTAACTT
EY913936       --> TGTTGCTAATTCTTTTTAAGACCTACCCAATCTGTAAAAGATCTTAACTT

               801    -    851
UN16404        --> GTTTGGTTTTGTAATAATCACAAAGATTCATACTCTTTCTTGTTCTGTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530949       <-- GTTTGGTTTTGTAATAATCACAAAGATTCATACTCTTTCTTGTTCTGTCT
EX891064       <-- GTTTGGTTTTGTAATAATCACAAAGATTCATACg................
FD952818       <-- GTTTGGTTTTGTAATAATCACAAAGTATCATACTCTTTCTTGTTC.....
EY910251       <-- GTTTGGTTTTGTAATAATCACAAAGTATCATACcc...............
FD545290       <-- GTTTGGTTTTGTAATGATCACAAAGATTCATACTCTTTCTTGTTCTGTCT
EY910078       <-- GTTTGGTTTTGTAATAATCACAAAGATTCATACTCTTTCTTGTTCTGTCT
FD959890       <-- GTTTGGTTTTGTAATAATCACAAAGATTCATACTCTTTCTTGac......
FY439968       --> ..................................................
EV526482       --> GTTTGGTTTTGTAATAATCACAAAGATTCATACTCTTTCTTGTTCTGTCT
EY914149       --> GTTTGGTTTTGTAATAATCACAAAGTATCATACcc...............
FD564219       --> ..................................................
FD957055       --> GTTTGGTTTTGTAATAATCACAAAGTATCATA..................
FD963647       --> ..................................................
FD549203       --> ..................................................
FD981561       --> GTTTGGTTTTGTAATAATCACAAAGTATCATACTCTTaaaaaaa......
EY913936       --> GTTTGGTTTTGTAATAATCACAAAGATTCATACTCTTTCTTGTTCTGTCT

               851    -    901
UN16404        --> GAATTGTTTATAGTTTCTTCATCGGTAAAAGATCTTTAACTTGTTTGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530949       <-- GAATTGTTTATAGTTTCTTCATCGGTAAAAGATCTTTAACT.........
EX891064       <-- ..................................................
FD952818       <-- ..................................................
EY910251       <-- ..................................................
FD545290       <-- GAATTGTTTATAGTTTCTTCATCGGTAAAAGATCTTTAACTTG.......
EY910078       <-- GAATTGTTTATAGTTTCTTCATCGGTAAAAGATCTTTAACTTGTTTGGTT
FD959890       <-- ..................................................
FY439968       --> ..................................................
EV526482       --> GAATTGTTTATAGTTTCTTCATCGGTAAAAGATCTTTAACT.........
EY914149       --> ..................................................
FD564219       --> ..................................................
FD957055       --> ..................................................
FD963647       --> ..................................................
FD549203       --> ..................................................
FD981561       --> ..................................................
EY913936       --> GAATTGTTTATAGTTTCTTCATCGGTAAAAGATCTTTAACTTGTTTGGTT

               901    -    951
UN16404        --> CTGTAATAACGAAG-TTCATGCTTTTGTTTTT-GTTTTCTA-TACCATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530949       <-- ..................................................
EX891064       <-- ..................................................
FD952818       <-- ..................................................
EY910251       <-- ..................................................
FD545290       <-- ..................................................
EY910078       <-- CTGTAATAACGAAGGTTCATGCTTTTGTTTTTTGTTTTCTAATACCA...
FD959890       <-- ..................................................
FY439968       --> ..................................................
EV526482       --> ..................................................
EY914149       --> ..................................................
FD564219       --> ..................................................
FD957055       --> ..................................................
FD963647       --> ..................................................
FD549203       --> ..................................................
FD981561       --> ..................................................
EY913936       --> CTGTAATAACGAAG-TTCATGCTTTTGTTTTT-GTTTTCTA-TACCATTT

               951    -   1001
UN16404        --> GGTTTTCAAACCAAAAAA
                   ~~~~~~~~~~~~~~~~~~
EV530949       <-- ..................
EX891064       <-- ..................
FD952818       <-- ..................
EY910251       <-- ..................
FD545290       <-- ..................
EY910078       <-- ..................
FD959890       <-- ..................
FY439968       --> ..................
EV526482       --> ..................
EY914149       --> ..................
FD564219       --> ..................
FD957055       --> ..................
FD963647       --> ..................
FD549203       --> ..................
FD981561       --> ..................
EY913936       --> GGTTTTCAAACCAAAAAA