1      -     51
UN16405        --> GGGAAAGGTAAAGAGAGATCAAATCAAAGAGAAGCGAATGGTTTGAGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572088       <-- GGGAAAGGTAAAGAGAGATCAAATCAAAGAGAAGCGAATGGTTTGAGAGG
EY937153       <-- ..................................................
FD985554       <-- ..................................................
EV567085       --> GGGAAAGGTAAAGAGAGATCAAATCAAAGAGAAGCGAATGGTTTGAGAGG
EY941617       --> ...ggAGGTAAAGAGAGATCAAATCAAAGAGAAGCGAATGGTTTGAGAGG
EW716431       --> .......ggAAAGAGAGATCAAATCAAAGAGAAGCGAATGGTTTGAGAGG
EY937584       --> .......ggAAAGAGAGATCAAATCAAAGAGAAGCGAATGGTTTGAGAGG
FD989811       --> ........gAAAGAGAGATCAAATCAAAGAGAAGCGAATGGTTTGAGAGG

               51     -    101
UN16405        --> TTAGATAATAAGTAGAAGAAGGAGATAGAGACGAAGAGACAGATCA---A
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572088       <-- TTAGATAATAAGTAGAAGAAGGAGATAGAGACGAAGAGACAGATCA---A  Raphanus raphanistrum subsp. landra
EY937153       <-- ..............GAAGAAGGAGATAGAGACGAAGAGACAGATCACAAA  Raphanus sativus cv Early Scarlet Globe
FD985554       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV567085       --> TTAGATAATAAGTAGAAGAAGGAGATAGAGACGAAGAGACAGATCA---A  Raphanus raphanistrum subsp. landra
EY941617       --> TTAGATAATAAGTAGAAGAAGGAGATAGAGACGAAGAGACAGATCACAAA  Raphanus sativus cv Early Scarlet Globe
EW716431       --> TTAGATAATAAGTAGAAGAAGGAGATAGAGACGAAGAGACAGATCA---A  Raphanus sativus var. oleiformis
EY937584       --> TTAGATAATAAGTAGAAGAAGGAGATAGAGACGAAGAGACAGATCACAAA  Raphanus sativus cv Early Scarlet Globe
FD989811       --> TTAGATAATAAGTAGAAGAAGGCGATAGAGACGAAGAGACAGATCA---A  Raphanus raphanistrum subsp. landra

               101    -    151
UN16405        --> TCATGATCCTTGCGGTGTTATTCGCTAATTCCGTAGGGAACGTTTTAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572088       <-- TCATGATCCTTGCGGTGTTATTCGCTAATTCCGTAGGGAACGTTTTAATC  Raphanus raphanistrum subsp. landra
EY937153       <-- TCATGATCCTTGCGGTGTTGTTCGCTAATTCCGTAGGGAACGTTTTAATC  Raphanus sativus cv Early Scarlet Globe
FD985554       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV567085       --> TCATGATCCTTGCGGTGTTATTCGCTAATTCCGTAGGGAACGTTTTAATC  Raphanus raphanistrum subsp. landra
EY941617       --> TCATGATCCTTGCGGTGTTGTTCGCTAATTCCGTAGGGAACGTTTTAATC  Raphanus sativus cv Early Scarlet Globe
EW716431       --> TCATGATCCTTGCGGTGTTATTCGCTAATTCCGTAGGGAACGTTTTAATC  Raphanus sativus var. oleiformis
EY937584       --> TCATGATCCTTGCGGTGTTGTTCGCTAATTCCGTAGGGAACGTTTTAATC  Raphanus sativus cv Early Scarlet Globe
FD989811       --> TCATGATCCTTGCGGTGTTATTCGCTAATTCCGTAGGGAACGTTTTAATC  Raphanus raphanistrum subsp. landra

               151    -    201
UN16405        --> GAAAGGTTCAATGGAGTGCCAGCTGAGGAACGGCTCACCTGGCGATCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572088       <-- GAAAGGTTCAATGGAGTGCCAGCTGAGGAACGGCTCACCTGGCGATCTTT
EY937153       <-- GAAAGGTTCAATGGAGTGCCAGCTGAGGAACGGCTCACCTGGCGATCTTT
FD985554       <-- ..................................................
EV567085       --> GAAAGGTTCAATGGAGTGCCAGCTGAGGAACGGCTCACCTGGCGATCTTT
EY941617       --> GAAAGGTTCAATGGAGTGCCAGCTGAGGAACGGCTCACCTGGCGATCTTT
EW716431       --> GAAAGGTTCAATGGAGTTCCAGCTGAGGAACGGCTCACCTGGCGATCTTT
EY937584       --> GAAAGGTTCAATGGAGTGCCAGCTGAGGAACGGCTCACCTGGCGATCTTT
FD989811       --> GAAAGGTTCAATGGAGTGCCAGCTGAGGAACGGCTCACCTGGCGATCTTT

               201    -    251
UN16405        --> CTTGGTTAAGTTGGGAGCAGAGAATCTCAAAGGTGTTAAGAATGAGGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572088       <-- CTTGGTTAAGTTGGGAGCAGAGAATCTCAAAGGTGTTAAGAATGAGGAGC  Raphanus raphanistrum subsp. landra
EY937153       <-- CTTGGTTAAGTTGGGAGCAGAGAATCTCAAAGGTGTTAAGAACGAGGAGC  Raphanus sativus cv Early Scarlet Globe
FD985554       <-- ..TGGTTAAGTTGGGAGCAGAGAATCTCAAAGGTGTTAAGAATGAGGAGC  Raphanus raphanistrum subsp. landra
EV567085       --> CTTGGTTAAGTTGGGAGCAGAGAATCTCAAAGGTGTTAAGAATGAGGAGC  Raphanus raphanistrum subsp. landra
EY941617       --> CTTGGTTAAGTTGGGAGCAGAGAATCTCAAAGGTGTTAAGAACGAGGAGC  Raphanus sativus cv Early Scarlet Globe
EW716431       --> CTTGGTTAAGTTGGGAGCAGAGAATCTCAAAGGTGTTAAGGACGAGGAGC  Raphanus sativus var. oleiformis
EY937584       --> CTTGGTTAAGTTGGGAGCAGAGAATCTCAAAGGTGTTAAGAACGAGGAGC  Raphanus sativus cv Early Scarlet Globe
FD989811       --> CTTGGTTAAGTTGGGAGCAGAGAATCTCAAAGGTGTTAAGAATGAGGAGC  Raphanus raphanistrum subsp. landra

               251    -    301
UN16405        --> TTCTCGTTGCTTGCCACAAGTCGGTTTATATCGTGTACACAATGCTAGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572088       <-- TTCTCGTTGCTTGCCACAAGTCGGTTTATATCGTGTACACAATGCTAGGG  Raphanus raphanistrum subsp. landra
EY937153       <-- TCCTCGTTGCTTGCCACAAGTCGGTTTATATCGTGTACACAATGCTAGGG  Raphanus sativus cv Early Scarlet Globe
FD985554       <-- TTCTCGTTGCTTGCCACAAGTCGGTTTATATCGTGTACACAATGCTAGGG  Raphanus raphanistrum subsp. landra
EV567085       --> TTCTCGTTGCTTGCCACAAGTCGGTTTATATCGTGTACACAATGCTAGGG  Raphanus raphanistrum subsp. landra
EY941617       --> TCCTCGTTGCTTGCCACAAGTCGGTTTATATCGTGTACACAATGCTAGGG  Raphanus sativus cv Early Scarlet Globe
EW716431       --> TTCTCGTTGCTTGCCACAAGTCGGTTTATATCGTGTACACAATGCTAGGG  Raphanus sativus var. oleiformis
EY937584       --> TCCTCGTTGCTTGCCACAAGTCGGTTTATATCGTGTACACAATGCTAGGG  Raphanus sativus cv Early Scarlet Globe
FD989811       --> TTCTCGTTGCTTGCCACAAGTCGGTTTATATCGTGTACACAATGCTAGGG  Raphanus raphanistrum subsp. landra

               301    -    351
UN16405        --> GATGTTAGCATCTTCCTTGTTGGTAAAGACGAGTACGATGAACTTGCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572088       <-- GATGTTAGCATCTTCCTTGTTGGTAAAGACGAGTACGATGAACTTGCTTT
EY937153       <-- GATGTTAGCATCTTCCTTGTTGGTAAAGACGAGTACGATGAACTTGCTTT
FD985554       <-- GATGTTAGCATCTTCCTTGTTGGTAAAGACGAGTACGATGAACTTGCTTT
EV567085       --> GATGTTAGCATCTTCCTTGTTGGTAAAGACGAGTACGATGAACTTGCTTT
EY941617       --> GATGTTAGCATCTTCCTTGTTGGTAAAGACGAGTACGATGAACTTGCTTT
EW716431       --> GATGTTAGCATCTTCCTTGTTGGTAAAGACGAGTACGATGAACTTGCTTT
EY937584       --> GATGTTAGCATCTTCCTTGTTGGTAAAGACGAGTACGATGAACTTGCTTT
FD989811       --> GATGTTAGCATCTTCCTTGTTGGTAAAGACGAGTACGATGAACTTGCTTT

               351    -    401
UN16405        --> GGCAGAAGCCATCTTTATCATAACAGGGGCTGTGAAAGACATATGCGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572088       <-- GGCAGAAGCCATCTTTATCATAACAGGGGCTGTGAAAGACATATGCGGCA  Raphanus raphanistrum subsp. landra
EY937153       <-- GGCAGAAGCCATCTTTATCATAACAGGGGCTGTGAAAGACATTTGCGGGA  Raphanus sativus cv Early Scarlet Globe
FD985554       <-- GGCAGAAGCCATCTTTATCATAACAGGGGCTGTGAAAGACATATGCGGCA  Raphanus raphanistrum subsp. landra
EV567085       --> GGCAGAAGCCATCTTTATCATAACAGGGGCTGTGAAAGACATATGCGGCA  Raphanus raphanistrum subsp. landra
EY941617       --> GGCAGAAGCCATCTTTATCATAACAGGGGCTGTGAAAGACATTTGCGGGA  Raphanus sativus cv Early Scarlet Globe
EW716431       --> GGCAGAAGCCATCTTTATCATAACAGGGGCTGTGAAAGACATATGCGGGA  Raphanus sativus var. oleiformis
EY937584       --> GGCAGAAGCCATCTTTATCATAACAGGGGCTGTGAAAGACATTTGCGGGA  Raphanus sativus cv Early Scarlet Globe
FD989811       --> GGCAGAAGCCATCTTTATCATAACAGGGGCTGTGAAAGACATATGCGGCA  Raphanus raphanistrum subsp. landra

               401    -    451
UN16405        --> AACCTCCTACAGAGCGAGTGTTTCTGGACAAATACGGAAGGATTTGTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572088       <-- AACCTCCTACAGAGCGAGTGTTTCTGGACAAATACGGAAGGATTTGTCTG  Raphanus raphanistrum subsp. landra
EY937153       <-- AACCTCCTACAGAGCGGGTGTTTCTGGACAAATACGGAAGGATTTGTCTG  Raphanus sativus cv Early Scarlet Globe
FD985554       <-- AACCTCCTACAGAGCGAGTGTTTCTGGACAAATACGGAAGGATTTGTCTG  Raphanus raphanistrum subsp. landra
EV567085       --> AACCTCCTACAGAGCGAGTGTTTCTGGACAAATACGGAAGGATTTGTCTG  Raphanus raphanistrum subsp. landra
EY941617       --> AACCTCCTACAGAGCGGGTGTTTCTGGACAAATACGGAAGGATTTGTCTG  Raphanus sativus cv Early Scarlet Globe
EW716431       --> AACCTCCTACAGAGCGAGTGTTTCTGGACAAATACGGAAGGATTTGTTTG  Raphanus sativus var. oleiformis
EY937584       --> AACCTCCTACAGAGCGGGTGTTTCTGGACAAATACGGAAGGATTTGTCTG  Raphanus sativus cv Early Scarlet Globe
FD989811       --> AACCTCCTACAGAGCGAGTGTTTCTGGACAAATACGGAAGGATTTGTCTG  Raphanus raphanistrum subsp. landra

               451    -    501
UN16405        --> TGTCTTGATGAAATCGTTTGGAACGGACTTCTCGAGAACACCGACAAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572088       <-- TGTCTTGATGAAATCGTTTGGAACGGACTTCTCGAGAACACCGACAAAGA
EY937153       <-- TGTCTTGATGAAATCGTTTGGAACGGACTTCTCGAGAACACCGACAAAGA
FD985554       <-- TGTCTTGATGAAATCGTTTGGAACGGACTTCTCGAGAACACCGACAAAGA
EV567085       --> TGTCTTGATGAAATCGTTTGGAACGGACTTCTCGAGAACACCGACAAAGA
EY941617       --> TGTCTTGATGAAATCGTTTGGAACGGACTTCTCGAGAACACCGACAAAGA
EW716431       --> TGTCTTGATGAAATCGTTTGGAACGGACTTCTCGAGAACACCGACAAAGA
EY937584       --> TGTCTTGATGAAATCGTTTGGAACGGACTTCTCGAGAACACCGACAAAGA
FD989811       --> TGTCTTGATGAAATCGTTTGGAACGGACTTCTCGAGAACACCGACAAAGA

               501    -    551
UN16405        --> CAGGATCAAGCGTCTCATTAGATTGAAACCTCCTTCTGAGTTTTGATTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572088       <-- CAGGATCAAGCGTCTCATTAGATTGAAACCTCCTTCTGAGTTTTGATTCC
EY937153       <-- CAGGATCAAGCGTCTCATTAGATTGAAACCTCCTTCTGAGTTTTGATTCC
FD985554       <-- CAGGATCAAGCGTCTCATTAGATTGAAACCTCCTTCTGAGTTTTGATTCC
EV567085       --> CAGGATCAAGCGTCTCATTAGATTGAAACCTCCTTCTGAGTTTTGATTCC
EY941617       --> CAGGATCAAGCGTCTCATTAGATTGAAACCTCCTTCTGAGTTTTGATTCC
EW716431       --> TAGGATCAAGCGTCTCATTAGATTGAAACCTCCTTCTGAGTTTTGATTCC
EY937584       --> CAGGATCAAGCGTCTCATTAGATTGAAACCTCCTTCTGAGTTTTGATTCC
FD989811       --> CAGGATCAAGCGTCTCATTAGATTGAAACCTCCTTCTGAGTTTTGATTCC

               551    -    601
UN16405        --> CTCTCACAACTCCAAACCACACACCCTTGCAACATGTTTTTTTTT-CCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572088       <-- CTCTCACAACTCCAAACCACACACCCTTGCAACATGTTTTTTTTT-CCAA  Raphanus raphanistrum subsp. landra
EY937153       <-- CTCTCACAACTCCAAACCACA--CCCTTGCAACATGTTTTTTTTTTCCAA  Raphanus sativus cv Early Scarlet Globe
FD985554       <-- CTCTCACAACTCCAAACCACACACCCTTGCAACATGTTTTTTTTT-CCAA  Raphanus raphanistrum subsp. landra
EV567085       --> CTCTCACAACTCCAAACCACACACCCTTGCAACATGTTTTTTTTT-CCAA  Raphanus raphanistrum subsp. landra
EY941617       --> CTCTCACAACTCCAAACCACAC--CCTTGCAACATGTTTTTTTTTTCCAA  Raphanus sativus cv Early Scarlet Globe
EW716431       --> CTCTCtccaac.......................................  Raphanus sativus var. oleiformis
EY937584       --> CTCTCACAACTCCAAACCACAC--CCTTGCAACATGTTTTTTTTT-CCAA  Raphanus sativus cv Early Scarlet Globe
FD989811       --> CTCTCACAACTCCAAACCACACACCCTTGCAACATGTTTTTTTTT-CCAA  Raphanus raphanistrum subsp. landra

               601    -    651
UN16405        --> CACTTATCAACAGAATGTCAGTTGCTGAATCACTTCTCTCTATCAAGTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572088       <-- CACTTATCAACAGAATGTCAGTTGCTGAATCACTTCTCTCTATCAAGTAT
EY937153       <-- CACTTATCAACAGAATGTCAGTTGCTGAATCACTTCTCTCTATCAAGTAT
FD985554       <-- CACTTATCAACAGAATGTCAGTTGGTGAATCACTTCTCTTTATCAAGTAT
EV567085       --> CACTTATCAACAGAATGTCAGTTGCTGAATCACTTCTCTCTATCAAGTAT
EY941617       --> CACTTATCAACAGAATGTCAGTTGCTGAATCACTTCTCTCTATCAAGTAT
EW716431       --> ..................................................
EY937584       --> CACTTATCAAC.......................................
FD989811       --> CACTTATCAACAGAATGTCAGTTGCTGAATCACTTCTCTCTATCAAGTAT

               651    -    701
UN16405        --> TGTACTGTTAACTACTGCTGTTCTTCGTTCAGACATTGAAGCAATTTAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572088       <-- TGTACTGTTAAC......................................
EY937153       <-- TGTACTGTTAACTACTGCTGTTCTTCGTTCAGACATTGAAGCAATTTAGT
FD985554       <-- TGTACTGTTAACTACTGCTGTTCTTCGTTCAGACATTGAAGCAATTTAGT
EV567085       --> TGTACTGTTAAC......................................
EY941617       --> TGTACTGTTAACTACTGCTGTTCTTCGTTCAGACATTGAAGCAATTTAGT
EW716431       --> ..................................................
EY937584       --> ..................................................
FD989811       --> TGTACTGTTAACTACTGCTGTTCTTCGTTCAGACATTGA-GCAATTTAGT

               701    -    751
UN16405        --> GTGGCGATGTTTATTGAAATCTTAGCTTCAAGGTTCCTCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572088       <-- .........................................
EY937153       <-- GTGGCGATGTTTATTGAAATCTTAGCTTCAAGGTTCCTCCC
FD985554       <-- GTGGCGATGTTTATgg.........................
EV567085       --> .........................................
EY941617       --> GTGGCGATGTTTATTGAA-TCTTAGCT..............
EW716431       --> .........................................
EY937584       --> .........................................
FD989811       --> Gggg.....................................