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Alignment for radish unigene UN16411

               -4     -     46
UN16411        --> .....GGACACAAGCAATATTCTCTCTTACTTTCCTCCTCTCTCACTCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY903441       <-- ..................................................
EV544509       <-- ..................................................
EX756453       --> .....GGACACAAGCAATATTCTCTCTTACTTTCCTCCTCTCTCACTCAC
EY907529       --> .....GGACACAAGCAATATTCTCTCTTACTTTCCTCCTCTCTCACTCAC
FD535794       --> .....GGACACAAGCAATATTCTCTCTTACTTTCCTCCTCTCTCACTCAC
FD556688       --> .....GGACACAAGCAATATTCTCTCTTACTTTCCTCCTCTCTCACTCAC
EY905601       --> ggaaagcACACAAGCAATATTCTCTCTTACTTTCCTCCTCTCTCACTCAC
FD533446       --> ..ggagcACACAAGCAATATTCTCTCTTACTTTCCTCCTCTCTCACTCAC
EY923641       --> .........ggAAGCAATATTCTCTCTTACTTTCCTCCTCTCTCACTCAC
EY924445       --> .........ggAAGCAATATTCTCTCTTACTTTCCTCCTCTCTCACTCAC
FD970060       --> ..................................................

               46     -     96
UN16411        --> TATACAATGGCAGGCAAGTGCATTTTAGCGAGTGTTCTAGGGGTAGTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY903441       <-- ..................................................
EV544509       <-- ..................................................
EX756453       --> TATACAATGGCAGGCAAGTGCATTTTAGCGAGTGTTCTAGGGGTAGTTTT
EY907529       --> TATACAATGGCAGGCAAGTGCATTTTAGCGAGTGTTCTAGGGGTAGTTTT
FD535794       --> TATACAATGGCAGGCAAGTGCATTTTAGCGAGTGTTCTAGGGGTAGTTTT
FD556688       --> TATACAATGGCAGGCAAGTGCATTTTAGCGAGTGTTCTAGGGGTAGTTTT
EY905601       --> TATACAATGGCAGGCAAGTGCATTTTAGCGAGTGTTCTAGGGGTAGTTTT
FD533446       --> TATACAATGGCAGGCAAGTGCATTTTAGCGAGTGTTCTAGGGGTAGTTTT
EY923641       --> TATACAATGGCAGGCAAGTGCATTTTAGCGAGTGTTCTAGGGGTAGTTTT
EY924445       --> TATACAATGGCAGGCAAGTGCATTTTAGCGAGTGTTCTAGGGGTAGTTTT
FD970060       --> ..................................................

               96     -    146
UN16411        --> GGTATTGACGCTGCTACACAACCCGCTCACCGTCTCCGGTCAAAATATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY903441       <-- ..................................................
EV544509       <-- ..................................................
EX756453       --> GGTATTGACGCTGCTACACAACCCGCTCACCGTCTCCGGTCAAAATATCC
EY907529       --> GGTATTGACGCTGCTACACAACCCGCTCACCGTCTCCGGTCAAAATATCC
FD535794       --> GGTATTGACGCTGCTACACAACCCGCTCACCGTCTCCGGTCAAAATATCC
FD556688       --> GGTATTGACGCTGCTACACAACCCGCTCACCGTCTCCGGTCAAAATATCC
EY905601       --> GGTATTGACGCTGCTACACAACCCGCTCACCGTCTCCGGTCAAAATATCC
FD533446       --> GGTATTGACGCTGCTACACAACCCGCTCGCCGCCTCCGGTCAAAATATCC
EY923641       --> GGTATTGACGCTGCTACACAACCCGCTCACCGTCTCCGGTCAAAATATCC
EY924445       --> GGTATTGACGCTGCTACACAACCCGCTCACCGTCTCCGGTCAAAATATCC
FD970060       --> ..................................................

               146    -    196
UN16411        --> CGGCGGTGGCTTTGTTCACGTTCGGTGACTCCGACTTCGACGCCGGAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY903441       <-- ..................................................
EV544509       <-- ..................................................
EX756453       --> CGGCGGTGGCTTTGTTCACGTTCGGTGACTCCGACTTCGACGCCGGAAAC
EY907529       --> CGGCGGTGGCTTTGTTCACGTTCGGTGACTCCGACTTCGACGCCGGAAAC
FD535794       --> CGGCGGTGGCTTTGTTCACGTTCGGTGACTCCGACTTCGACGCCGGAAAC
FD556688       --> CGGCGGTGGCTTTGTTCACGTTCGGTGACTCCGACTTCGACGCCGGAAAC
EY905601       --> CGGCGGTGGCTTTGTTCACGTTCGGTGACTCCGACTTCGACGCCGGAAAC
FD533446       --> CGGCGGTGGCTTTGTTCACGTTCGGTGACTCCGACTTCGACGCCGGAAAC
EY923641       --> CGGCGGTGGCTTTGTTCACGTTCGGTGACTCCGACTTCGACGCCGGAAAC
EY924445       --> CGGCGGTGGCTTTGTTCACGTTCGGTGACTCCGACTTCGACGCCGGAAAC
FD970060       --> ..................................................

               196    -    246
UN16411        --> AAACAGACTCTCACCACAGCAAACGTTGCCCAAGGTTTCTGGCCGTACGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY903441       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV544509       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX756453       --> AAACAGACTCTCACCACAGCAAACGTTGCCCAGGGTTTCTGGCCGTACGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907529       --> AAACAGACTCTCACCACAGCAAACGTTGCCCAGGGTTTCTGGCCGTACGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD535794       --> AAACAGACTCTCACCACAGCAAACGTTGCCCAAGGTTTCTGGCCGTACGG  Raphanus raphanistrum subsp. maritimus
FD556688       --> AAACAGACTCCCACCACAGCAAACGTTGCCCAAGGTTTCTGGCCGTACGG  Raphanus raphanistrum subsp. landra
EY905601       --> AAACAGACTCTCACCACAGCAAACGTTGCCCAGGGTTTCTGGCCGTACGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD533446       --> AAACAGACTCTCACCACAGCAAACGTTGCCCAAGGTTTCTGGCCGTACGG  Raphanus raphanistrum subsp. maritimus
EY923641       --> AAACAGACTCTCACCACAGCAAACGTTGCCCAAGGTTTCTGGCCGTACGG  Raphanus raphanistrum subsp. landra
EY924445       --> AAACAGACTCTCACCACAGCAAACGTTGCCCAAGGTTTCTGGCCGTACGG  Raphanus raphanistrum subsp. landra
FD970060       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               246    -    296
UN16411        --> TAAATCCAGAGATGATCCTAACGGGAAATTCTCCGACGGTTTCATCGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY903441       <-- ..................................................
EV544509       <-- ..................................................
EX756453       --> TAAGTCCAGAGATGATCCTAACGGGAAATTCTCCGACGGTTTCATCGCTC
EY907529       --> TAAATCCAGAGATGATCCTAACGGGAAATTCTCCGAC.............
FD535794       --> TAAATCCAGAGATGATCCTAACGGGAAATTCTCCGACGGTTTCATCGCTC
FD556688       --> TAAATCCAGAGATGATCCTAACGGGAAATTCTCCGACGGTTTCATCGCTC
EY905601       --> TAAATCCAGAGATGATCCTAACGGGAAATTCTCCGACGGTTTCATCGCTC
FD533446       --> TAAATCCAGAGATGATCCTAACGGGAAATTCTCCGACGGTTTCATCGCTC
EY923641       --> TAAATCCAGAGATGATCCTAACGGGAAATTCTCCGACGGTTTCATCGCTC
EY924445       --> TAAATCCAGAGATGATCCTAACGGGAAATTCTCCGACGGTTTCATCGCTC
FD970060       --> ..................................................

               296    -    346
UN16411        --> CTGACTTCGTCGCAAAATTCATGGGGATACCAATCCCAATCCCGGCGGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY903441       <-- ..................................................
EV544509       <-- ..................................................
EX756453       --> CTGACTTCGTCGCAAAATTCATGGGGATACCAATCCCAATCCCGGCGGCC
EY907529       --> ..................................................
FD535794       --> CTGACTTCGTCGCAAAATTCATGGGGATACCAATCCCAATCCCGGCGGCC
FD556688       --> CTGACTTCGTCGCAAAATTCATGGGGATACCAATCCCAATCCCGGCGGCC
EY905601       --> CTGACTTCGTCGCAAAATTCATGGGGATACCAATCCCAATCCCGGCGGCC
FD533446       --> CTGACTTCGTCGCAAAATTCATGGGGATACCAATCCCAATCCCGGCGGCC
EY923641       --> CTGACTTCGTCGCAAAATTCATGGGGATACCAATCCCAATCCCGGCGGCC
EY924445       --> CTGACTTCGTCGCAAAATTCATGGGGATACCAATCCCAATCCCGGCGGCC
FD970060       --> ..................................................

               346    -    396
UN16411        --> CTTAAACCGAACGTCAATGTCTCACGTGGAGCTAGTTTCGCCGTTGCTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY903441       <-- ..................................................
EV544509       <-- ..................................................
EX756453       --> CTTAAACCAAACGTTAATGTCTCACGTGGAGCTAGTTTCGCCGTTGCTGA
EY907529       --> ..................................................
FD535794       --> CTTAAACCGAACGTCAATGTCTCACGTGGAGCTAGTTTCGCCGTTGCTGA
FD556688       --> CTTAAACCGAACGTCAATGTCTCACGTGGAGCTAGTTTCGCCGTTGCTGA
EY905601       --> CTTAAACCAAACGTTAATGTCTCACGTGGAGCTAGTTTCGCCGTTGCTGA
FD533446       --> CTTAAACCGAACGTCAATGTCTCACGTGGAGCTAGTTTCGCCGTTGCTGA
EY923641       --> CTTAAACCGAACGTCAATGTCTCACGTGGAGCTAGTCTCGCCGTTGCTGA
EY924445       --> CTTAAACCGAACGTCAATGTCTCACGTGGAGCTAGTCTCGCCGTTGCTGA
FD970060       --> ..................................................

               396    -    446
UN16411        --> TGCTACGCTTCTCGGAGCTCCGGTTGAATCTTTGACTCTAAGTCAACAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY903441       <-- ..................................................
EV544509       <-- ..................................................
EX756453       --> TGCTACTCTTCTCGGAGCTCCGGTTGAATCTTTGACTCTAAGTCAACAAG
EY907529       --> ..................................................
FD535794       --> TGCTACGCTTCTCGGAGCTCCGGTTGAATCTTTGACTCTAAGTCAACAAG
FD556688       --> TGCTACGCTTCTCGGAGCTCCGGTTGAATCTTTGACTCTAAGTCAACAAG
EY905601       --> TGCTACTCTTCTCGGAGCTCCGGTTGAATCTTTGACTCTAAGTCAACAAG
FD533446       --> TGCTACGCTTCTCGGAGCTCCGGTTGAATCTTTGACTCTAAGTCAACAAG
EY923641       --> TGCTACGCTTCTCGGAGCTCCGGTTGAATCTTTGACTCTAAGTCAACAAG
EY924445       --> TGCTACGCTTCTCGGAGCTCCGGTTGAATCTTTGACTCTAAGTCAACAAG
FD970060       --> ..................................................

               446    -    496
UN16411        --> TGCGGAAATTTAATCAAATGAAAGCAGCAAACTGGAATGATGACTTTATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY903441       <-- ..................................................
EV544509       <-- ..................................................
EX756453       --> TGCGGAAATTTAATCAAATGAAAGCAGCAAACTGGAATGATGACTTTATC
EY907529       --> ..................................................
FD535794       --> TGCGGAAATTTAATCAAATGAAAGCAGCAAACTGGAATGATGACTTTATC
FD556688       --> TGCGGAAATTTAATCAAATGAAAGCAGCAAACTGGAATGATGACTTTATC
EY905601       --> TGCGGAAATTTAATCAAATGAAAGCAGCAAACTGGAATGATGACTTTATC
FD533446       --> TGCGGAAATTTAATCAAATGAAAGCAGCAAACTGGAATGATGACTTTATC
EY923641       --> TGCGGAAATTTAATCAAATGAAAGCAGCAAACTGGAATGATGACTTTATC
EY924445       --> TGCGGAAATTTAATCAAATGAAAGCAGCAAACTGGAATGATGACTTTATC
FD970060       --> .......................GCAGCAAACTGGAATGATGACTTTATC

               496    -    546
UN16411        --> AAGAAGTCAGTGTTTATGATATACGTTGGTGCTAACGACTACTTGAATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY903441       <-- ..................................................
EV544509       <-- ..................................................
EX756453       --> AAGAAGTCAGTTTTTATGATATACGTTGGTGCTAACGACTACTTGAATTT
EY907529       --> ..................................................
FD535794       --> AAGAAGTCAGTGTTTATGATATACGTTGGTGCTAACGACTACTTGAATTT
FD556688       --> AAGAAGTCAGTGTTTATGATATACGTTGGTGCTAACGACTACTTGAATTT
EY905601       --> AAGAAGTCAGTGTTTATGATATACGTTGGTGCTAACGACTACTTGAATTT
FD533446       --> AAGAAGTCAGTGTTTATGATATACGTTGGTGCTAACGACTACTTGAATTT
EY923641       --> AAGAAGTCAGTGTTTATGATATACGTTGGTGCTAACGACTACTTGAATTT
EY924445       --> AAGAAGTCAGTGTTTATGATATACGTTGGTGCTAACGACTACTTGAATTT
FD970060       --> AAGAAGTCAGTGTTTATGATATACGTTGGTGCTAACGACTACTTGAATTT

               546    -    596
UN16411        --> CACCAAGAACAACCCTAACGCCGATGCTTCTGCTCAACAAGCTTTCGTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY903441       <-- ..................................................
EV544509       <-- ..................................................
EX756453       --> CACCAAGAACAACCCTAACGCCGATGCTTCTGCTCAACAAGCTTTCGTCA
EY907529       --> ..................................................
FD535794       --> CACCAAGAACAACCCTAACGCCGATGCTTCTGCTCAACAAGCTTTCGTCA
FD556688       --> CACCAAGAACGACCCTAACGCCGATGCTTCTGCTCAACAAGCTTTCGTCA
EY905601       --> CACCAAGAACAACCCTAACGCCGATGCTTCTGCTCAACAAGCTTTCGTCA
FD533446       --> CACCAAGAACAACCCTAACGCCGATGCTTCTGCTCAACAAGCTTTCGTCA
EY923641       --> CACCAAGAACAACCCTAACGCCGATGCTTCTGCTCAACAAGCTTTCGTCA
EY924445       --> CACCAAGAACAACCCTAACGCCGATGCTTCTGCTCAACAAGCTTTCGTCA
FD970060       --> CACCAAGAACAACCCTAACGCCGATGCTTCTGCTCAACAAGCTTTCGTCA

               596    -    646
UN16411        --> CTTCGGTGACCAACAAGTTAAAGAATGATATCAGCTTGTTGTATTCATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY903441       <-- ..................................................
EV544509       <-- ..................................................
EX756453       --> CTTCGGTGACCAACAAGTTAAAGAATGATATCAGCTTGTTGTATTCA...
EY907529       --> ..................................................
FD535794       --> CTTCGGTGACCAACAAGTTAAAGAATGATATCAGCTCGTTGTATTCATCA
FD556688       --> CTTCGGTGACCAACAAGTTAAAGAATGATATCAGCTTGTTGTATTCATCA
EY905601       --> CTTCGGTGACCAACAAGTTAAAGAATGATATCAGCTTGTTGTATTCATCA
FD533446       --> CTTCGGTGACCAACAAGTTAAAGAATGATATCAGCTTGTTGTATTCA...
EY923641       --> CTTCGGTGACCAACAAGTTAAAGAATGATATCAGCTTGTTGTATTCATCA
EY924445       --> CTTCG-TGACCAACAAGTTAAAGAATGATATCAGCTTGTTGTATTCATCA
FD970060       --> CTTCGGTGACCAACAAGTTAAAGAGTGATATCAGCTTGTTGTATTCATCA

               646    -    696
UN16411        --> -G-AGCTAGTAAATTTGTGATCCAAACCCTAGCACCATTAG-TTGCTTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY903441       <-- ..................................................
EV544509       <-- ..................................................
EX756453       --> ..................................................
EY907529       --> ..................................................
FD535794       --> -G-AGCTAGTAAATTTGTGATCCAAACCCTAGCACCATTAG-TTGCTTAC
FD556688       --> -G-AGCTAGTAAATTTGTGATCCAAACCCTAGCACCATTAG-TTGCTTAC
EY905601       --> -G-AGCTAGTAAATTTGTGATCCAAACCCTAGCACCATTAG-TTGCTTAC
FD533446       --> ..................................................
EY923641       --> CG-AGCTAGTAAATTTGTGATCCAAACCCTAGCACCATTAG-TTGCTTAC
EY924445       --> -G-AGCTAGTAA-TTTGTGATCCAAACCCTAGCACCATTAG-TTGCTTAC
FD970060       --> -GGAGCTAGTAAATTTGTGATCCAAACCCTAGCACCATTAGGTTGCTTAC

               696    -    746
UN16411        --> CTATAGTCAGACA-GATTACAACACAGGAATGGATCAATGCCACGAAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY903441       <-- .................................ATCAATGCCACGAAGGT
EV544509       <-- ..................................................
EX756453       --> ..................................................
EY907529       --> ..................................................
FD535794       --> CTATAGTCAGACA-GATT................................
FD556688       --> CTATA.............................................
EY905601       --> CTAT..............................................
FD533446       --> ..................................................
EY923641       --> CTATAGTCAGACA-GATa................................
EY924445       --> CTATAGTCAGACA-GATacaaacag.........................
FD970060       --> CTATAGTCAGACAAGATTACAACACAGGAATGGATCAATGCCACGAAGGT

               746    -    796
UN16411        --> CTCAATAATTTGGCTAAACAACACAACGAAAAAATCGGACCGATGTTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY903441       <-- CTCAATAATTTGGCTAAACAACACAACGAAAAAATCGGACCGATGTTGAA
EV544509       <-- ..................................................
EX756453       --> ..................................................
EY907529       --> ..................................................
FD535794       --> ..................................................
FD556688       --> ..................................................
EY905601       --> ..................................................
FD533446       --> ..................................................
EY923641       --> ..................................................
EY924445       --> ..................................................
FD970060       --> CTCAATAATTTGGCTAAACAACACAACGAAAAAATCGGACCGATGTTGAA

               796    -    846
UN16411        --> CGAAATGGCCCGAACAACTTCTGGTTTCCAATTTACCGTCTTCGATTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY903441       <-- CGAAATGGCCCGAACAACTTCTGGTTTCCAATTTACCGTCTTCGATTTCT
EV544509       <-- .........................................TCGATTTCT
EX756453       --> ..................................................
EY907529       --> ..................................................
FD535794       --> ..................................................
FD556688       --> ..................................................
EY905601       --> ..................................................
FD533446       --> ..................................................
EY923641       --> ..................................................
EY924445       --> ..................................................
FD970060       --> CGAAATGGCCCGAACAACTTCTGGTTTCCAATTTACCGTCTTCGATTTCT

               846    -    896
UN16411        --> ACAGTGTCATTCTTCGTAGGACGCAGAGAGGCTTCAACTACAGGTTTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY903441       <-- ACAGTGTCATTCTTCGTAGGACGCAGAGAGGCTTCAACTACAGGTTTTTC
EV544509       <-- ACAGTGTCATTCTTCGTAGGACGCAGAGAGGCTTCAACTACAGGTTTTTC
EX756453       --> ..................................................
EY907529       --> ..................................................
FD535794       --> ..................................................
FD556688       --> ..................................................
EY905601       --> ..................................................
FD533446       --> ..................................................
EY923641       --> ..................................................
EY924445       --> ..................................................
FD970060       --> ACAGTGTCATTCTTCGTAGGACGCAGAGAGGCTTCAACTACAGGTTTTTC

               896    -    946
UN16411        --> GTGACAAATGCATCGTGCTGCGGTGTTGGGACACACAATGCTTACGGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY903441       <-- GTGACAAATGCATCGTGCTGCGGTGTTGGGACACACAATGCTTACGGTTG
EV544509       <-- GTGACAAATGCATCGTGCTGCGGTGTTGGGACACACAATGCTTACGGTTG
EX756453       --> ..................................................
EY907529       --> ..................................................
FD535794       --> ..................................................
FD556688       --> ..................................................
EY905601       --> ..................................................
FD533446       --> ..................................................
EY923641       --> ..................................................
EY924445       --> ..................................................
FD970060       --> GTGACAAATGCATCGTGCTGCGGTGTTGGGACACACAATGCTTACGGTTG

               946    -    996
UN16411        --> CGGTTTACCTAACGTGCACTCCAAGCTATGTGAG-TACC-AACGATCTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY903441       <-- CGGTTTACCTAACGTGCACTCCAAGCTATGTGAG-TACC-AACGATCTTA
EV544509       <-- CGGTTTACCTAACGTGCACTCCAAGCTATGTGAG-TACC-AACGATTTTA
EX756453       --> ..................................................
EY907529       --> ..................................................
FD535794       --> ..................................................
FD556688       --> ..................................................
EY905601       --> ..................................................
FD533446       --> ..................................................
EY923641       --> ..................................................
EY924445       --> ..................................................
FD970060       --> CGGTTTACCTAACGTGCACTCCAAGCTATGTGTGTTACCTAACGATCTTA

               996    -   1046
UN16411        --> CTTATTCTTCGATGGGCGTCACAATACCGAGAAGGCACAAGAGAGTTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY903441       <-- CTTATTCTTCGATGGGCGTCACAATACCGAGAAGGCACAAGAGAGTTTTG
EV544509       <-- CTTATTTTTCGATGGGCGTCACAATACCGAGAAGGCACAAGAGAGTTTTG
EX756453       --> ..................................................
EY907529       --> ..................................................
FD535794       --> ..................................................
FD556688       --> ..................................................
EY905601       --> ..................................................
FD533446       --> ..................................................
EY923641       --> ..................................................
EY924445       --> ..................................................
FD970060       --> CTTATTCTTCGATGGGCGTCACAATACCGAGAAAGCACAAGAGAGTTTTG

               1046   -   1096
UN16411        --> GTCATCTTCTTTTCGGAGCCGATCCAAATGTGATCCAACCAATGAATGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY903441       <-- GTCATCTTCTTTTCGGAGCCGATCCAAATGTGATCCAACCAATGAATGTC
EV544509       <-- GTCATTTTCTTTTCGGAGCCGATCCAAATGTGATCCAACCAATGAATGTC
EX756453       --> ..................................................
EY907529       --> ..................................................
FD535794       --> ..................................................
FD556688       --> ..................................................
EY905601       --> ..................................................
FD533446       --> ..................................................
EY923641       --> ..................................................
EY924445       --> ..................................................
FD970060       --> GTCATCTTCTTTTCGGAGCCGATCCAAATGTGATCCAACCAATGAATGTC

               1096   -   1146
UN16411        --> CGCGAGCTCGTTGTTTACCCAGTCGATGAACCTATGAGGGAAGTTTGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY903441       <-- CGCGAGCTCGTTGTTTACCCAGTCGATGAACCTATGAGGGAAGTTTGGGT
EV544509       <-- CGCGAGCTCGTTGTTTACCCAGTCGATGAACCTATGAGGGAAGTTTGGTT
EX756453       --> ..................................................
EY907529       --> ..................................................
FD535794       --> ..................................................
FD556688       --> ..................................................
EY905601       --> ..................................................
FD533446       --> ..................................................
EY923641       --> ..................................................
EY924445       --> ..................................................
FD970060       --> CGCGAGCTCGTTGTTTACCCAGTCGATGAACCTATGAGGG..........

               1146   -   1196
UN16411        --> ACCTACAACGTCAGCTACCGTCCAAGCCAGCGACTTTAGCTCGTCAACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY903441       <-- ACCTACAACGTCAGCCACCGTCCAAGCCAGCGACTCTAGCTCGTCAACAA
EV544509       <-- ACCTACAACGTCAGCTACCATCCAAGCCAGCGACTTTAGCT.........
EX756453       --> ..................................................
EY907529       --> ..................................................
FD535794       --> ..................................................
FD556688       --> ..................................................
EY905601       --> ..................................................
FD533446       --> ..................................................
EY923641       --> ..................................................
EY924445       --> ..................................................
FD970060       --> ..................................................

               1196   -   1246
UN16411        --> GCCGCGGTTACGAGTTCTATTGAGTCCCTATAAATTACATCTAAGAAATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY903441       <-- GCCGCGGTTACGAGTTCTATTGAGTCCCTATAAATTACATCTAAGAAATT
EV544509       <-- ..................................................
EX756453       --> ..................................................
EY907529       --> ..................................................
FD535794       --> ..................................................
FD556688       --> ..................................................
EY905601       --> ..................................................
FD533446       --> ..................................................
EY923641       --> ..................................................
EY924445       --> ..................................................
FD970060       --> ..................................................

               1246   -   1296
UN16411        --> GAATTTGTGATGTTTTCGTTTTCAACTTGTTTTTTCATCTTGCTCGAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY903441       <-- GAATTTGTGATGTTTTCGTTTTCAACTTGTTTTTTCATCTTGCTCGAGTG
EV544509       <-- ..................................................
EX756453       --> ..................................................
EY907529       --> ..................................................
FD535794       --> ..................................................
FD556688       --> ..................................................
EY905601       --> ..................................................
FD533446       --> ..................................................
EY923641       --> ..................................................
EY924445       --> ..................................................
FD970060       --> ..................................................

               1296   -   1346
UN16411        --> AGTTTCCCTCTATAATAAAAGATCGATCATTGTAACTCTTACCACGTAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY903441       <-- AGTTTCCCTCTATAATAAAAGATCGATCATTGTAACTCTTACCACGTAGT
EV544509       <-- ..................................................
EX756453       --> ..................................................
EY907529       --> ..................................................
FD535794       --> ..................................................
FD556688       --> ..................................................
EY905601       --> ..................................................
FD533446       --> ..................................................
EY923641       --> ..................................................
EY924445       --> ..................................................
FD970060       --> ..................................................

               1346   -   1396
UN16411        --> GGACTGTTTAGGAAGTGAATCAATATGTCGATCATTTTACCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY903441       <-- GGACTGTTTAGGAAGTGAATCAATATGTCGATCATTTTACCC
EV544509       <-- ..........................................
EX756453       --> ..........................................
EY907529       --> ..........................................
FD535794       --> ..........................................
FD556688       --> ..........................................
EY905601       --> ..........................................
FD533446       --> ..........................................
EY923641       --> ..........................................
EY924445       --> ..........................................
FD970060       --> ..........................................