-4     -     46
UN16419        --> .....GGACGTGCTCCAGCTCTCAAGATCGCCGCTTCTCACTAAGAAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD572662       <-- ..................................................
FD538135       <-- ..................................................
FD952439       <-- ..................................................
EY901342       <-- ..................................................
EY945392       <-- ..................................................
EY901511       <-- ..................................................
EY903631       <-- ..................................................
FD582252       <-- ..................................................
EY904750       --> .....GGACGTGCTCCAGCTCTCAAGATCGCCGCTTCTCACTAAGAAGAC
EY907818       --> .....GGACGTGCTCCAGCTCTCAAGATCGCCGCTTCTCACTAAGAAGAC
EY949987       --> .....GGACGTGCTCCAGCTCTCAAGATCGCCGCTTCTCACTAAGAAGAC
FD956585       --> .....GGACGTGCTCCAGCTCTCAAGATCGCCGCTTCTCACTAAGAAGAC
EY904968       --> ...ggctACGTGCTCCAGCTCTCAAGATCGCTGCTTCTCACTAAGAAGAC
FD541961       --> gggttctACGTGCTCCAGCTCTCGAGATCGCCGCTTCTCACTAAGAAGAC
FD568295       --> .ggctctACGTGCTCCAGCTCTCAAGATCGCCGCTTCTCACTAAGAAGAC
EY907775       --> .......ggGTGCTCCAGCTCTCAAGATCGCCGCTTCTCACTAAGAAGAC
FY451881       --> .........................GATCGCCGCTTCTCACTAAGAAGAC
FY435496       --> ..............................CCGCTTCTCACTAAGAAGAC
FY439073       --> ........................................CTAAGAAGAC
FY429302       --> ..................................................
FY444350       --> ..................................................
FD578048       --> ..................................................

               46     -     96
UN16419        --> CAAAACATGGTGCACGTTTGCTACTACCGTAACTATGGAAAGACCTTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD572662       <-- .............ACGTTTGCTACTACCGTAACTATGGAAAGACCTTCAA
FD538135       <-- ..................................................
FD952439       <-- ..................................................
EY901342       <-- ..................................................
EY945392       <-- ..................................................
EY901511       <-- ..................................................
EY903631       <-- ..................................................
FD582252       <-- ..................................................
EY904750       --> CAAAACATGGTGCACGTTTGCTACTACCGTAACTATGGAAAGACCTTCAA
EY907818       --> CAAAACATGGTGCACGTTTGCTACTACCGTAACTATGGAAAGACCTTCAA
EY949987       --> CAAAACATGGTGCACGTTTGCTACTACCGTAACTATGGAAAGACCTTCAA
FD956585       --> CAAAACATGGTGCACGTTTGCTACTACCGTAACTATGGAAAGACCTTCAA
EY904968       --> CAAAACATGGTGCACGTTTGCTACTACCGTAACTATGGAAAGACCTTCAA
FD541961       --> CAAAGCATGGTGCACGTTTGCTACTACCGTAACTATGGAAAGACCTTCAA
FD568295       --> CAAAACATGGTGCACGTTTGCTACTACCGTAACTATGGAAAGACCTTCAA
EY907775       --> CAAAACATGGTGCACGTTTGCTACTACCGTAACTATGGAAAGACCTTCAA
FY451881       --> CAAAACATGGTGCACGTTTGCTACTACCGTAACTATGGAAAGACCTTCAA
FY435496       --> -AAAACATGGTGCACGTTTGCTACTACCGTAACTATGGAAAGACCTTCAA
FY439073       --> CAAAACATGGTGCACGTTTGCTACTACCGTAACTATGGAAAGACCTTCAA
FY429302       --> .AAAACATGGTGCACGTTTGCTACTACCGTAACTATGGAAAGACCTTCAA
FY444350       --> ......ATGGTGCACGTTTGCTACTACCGTAACTATGGAAACCCTTTAAA
FD578048       --> ..................................................

               96     -    146
UN16419        --> GGGACCAAGACGTCCTTTCGAGAAGGAGCGTCTGGACTCGGAGCTGAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD572662       <-- GGGACCAAGACGCCCTTTCGAGAAGGAGCGTCTGGACTCGGAGCTGAAGC  Raphanus sativus cv Early Scarlet Globe
FD538135       <-- .................TCGAGAAGGAGCGTCTCGACTCGGAGCTGAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD952439       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY901342       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945392       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY901511       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903631       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD582252       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY904750       --> GGGACCAAGACGTCCTTTCGAGAAGGAGCGTCTCGACTCGGAGCTGAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907818       --> GGGACCAAGACGTCCTTTCGAGAAGGAGCGTCTCGACTCGGAGCTGAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY949987       --> GGGACCAAGACGTCCTTTCGATAAGGAGCGTCTGGACTCGGAGCTGAAGC  Raphanus sativus cv Rat-Tail Radish #3870
FD956585       --> GGGACCAAGACGTCCTTTCGAGAAGGAGCGTCTGGACTCGGAGCTGAAGC  Raphanus sativus cv Rat-Tail Radish #3870
EY904968       --> GGGACCAAGACGTCCTTTCGAGAAGGAGCGTCTCGACTCGGAGCTGAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541961       --> GGGACCAAGACGTCCTTTCGAGAAGGAGCGTCTCGACTCGGAGCTGAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD568295       --> GGGACCAAGACGCCCTTTCGAGAAGGAGCGTCTGGACTCGGAGCTGAAGC  Raphanus sativus cv Early Scarlet Globe
EY907775       --> GGGACCAAGACGTCCTTTCGAGAAGGAGCGTCTCGACTCGGAGCTGAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FY451881       --> GGGACCAAGACGTCCTTTCGAGAAGGAGCGTCTGGACTCGGAGCTGAAGC  Raphanus sativus cv GSK3-1
FY435496       --> GGGACCAAGACGTCCTTTCGAGAAGGAGCGTCTGGACTCGGAGCTGAAGC  Raphanus sativus cv GSK3-1
FY439073       --> GGGACCAAGACGTCCTTTCGAGAAGGAGCGTCTGGACTCGGAGCTGAAGC  Raphanus sativus cv GSK3-1
FY429302       --> GGGACCAAGACGTCCTTTCGAGAAGGAGCGTCTGGACTCGGAGCTGAAGC  Raphanus sativus cv GSK3-1
FY444350       --> GGGACCAAGACGTCCTTTCGAGAAGGAGCGTCCGGTCTCGGAGCTGAAGC  Raphanus sativus cv GSK3-1
FD578048       --> ............................gGTCTGGACTCGGAGCTGAAGC  Raphanus sativus cv Rat-Tail Radish #3870

               146    -    196
UN16419        --> TAGTCGGCGAGTACGGTCTCCGCAACAAGCGTGAGCTCTGGAGAGTCCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD572662       <-- TAGTCGGCGAGTACGGTCTCCGCAACAAGCGTGAGCTCTGGAGAGTCCAG
FD538135       <-- TAGTCGGCGAGTACGGTCTCCGCAACAAGCGTGAGCTCTGGAGAGTCCAG
FD952439       <-- ..................................................
EY901342       <-- ..................................................
EY945392       <-- ..................................................
EY901511       <-- ..................................................
EY903631       <-- ..................................................
FD582252       <-- ..................................................
EY904750       --> TAGTCGGCGAGTACGGTCTCCGCAACAAGCGTGAGCTCTGGAGAGTCCAG
EY907818       --> TAGTCGGCGAGTACGGTCTCCGCAACAGGCGTGAGCTCTGGAGAGTCCAG
EY949987       --> TAGTCGGCGAGTACGGTCTCCGCAACAAGCGTGAGCTCTGGAGAGTCCAG
FD956585       --> TAGTCGGCGAGTACGGTCTCCGCAACAAGCGTGAGCTCTGGAGAGTCCAG
EY904968       --> TAGTCGGCGAGTACGGTCTCCGCAACAAGCGTGAGCTCTGGAGAGTCCAG
FD541961       --> TAGTCGGCGAGTACGGTCTCCGCAACAAGCGTGAGCTCTGGAGAGTCCAG
FD568295       --> TAGTCGGCGAGTACGGTCTCCGCAACAAGCGTGAGCTCTGGAGAGTCCAG
EY907775       --> TAGTCGGCGAGTACGGTCTCCGCAACAAGCGTGAGCTCTGGAGAGTCCAG
FY451881       --> TAGTCGGCGAGTACGGTCTCCGCAACAAGCGTGAGCTCTGGAGAGTCCAG
FY435496       --> TAGTCGGCGAGTACGGTCTCCGCAACAAGCGTGAGCTCTGGAGAGTCCAG
FY439073       --> TAGTCGGCGAGTACGGTCTCCGCAACAAGCGTGAGCTCTGGAGAGTCCAG
FY429302       --> TAGTCGGCGAGTACGGTCTCCGCAACAAGCGTGAGCTCTGGAGAGTCCAG
FY444350       --> TAGTCGGCGAGTACGGTCTCCGCAACAAGCGTGAGCTCTGGAGAGTCCAG
FD578048       --> TAGTCGGCGAGTACGGTCTCCGCAACAAGCGTGAGCTCTGGAGAGTCCAG

               196    -    246
UN16419        --> TACTCTCTGAGCCGCATCCGTAACGCCGCCAGAGATCTTCTGACTCTCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD572662       <-- TACTTTTTGAGCCGCATCCGTAACGCCGCCAGAGATCTTTTGACTCTCGA  Raphanus sativus cv Early Scarlet Globe
FD538135       <-- TACTCTCTGAGCCGCATCCGTAACGCCGCGAGAGATCTTCTGACTCTCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD952439       <-- ........GAGCCGCATCCGTAACGCCGCCAGAGATCTTCTGACTCTCGA  Raphanus sativus cv Rat-Tail Radish #3870
EY901342       <-- ..........GCCGCATCCGTAACGCCGCGAGAGATCTTCTGACTCTCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945392       <-- .....................AACGCCGCCAGAGATCTTCTGACTCTCGA  Raphanus sativus cv Rat-Tail Radish #3870
EY901511       <-- .................................................A  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903631       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD582252       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY904750       --> TACTCTCTGAGCCGCATCCGTAACGCCGCGAGAGATCTTCTGACTCTCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907818       --> TACTCTCTGAGCCGCATCCGTAACGCCGCGAGAGATCTTCTGACTCTCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY949987       --> TACTCTCTGAGCCGCATCCGTAACGCCGCCAGAGATCTTCTGACTCTCGA  Raphanus sativus cv Rat-Tail Radish #3870
FD956585       --> TACTCTCTGAGCCGCATCCGTAACGCCGCCAGAGATCTTCTGACTCTCGA  Raphanus sativus cv Rat-Tail Radish #3870
EY904968       --> TACTCTCTGAGCCGCATCCGTAACGCCGCGAGAGATCTTCTGACTCTCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541961       --> TACTCTCTGAGCCGCATCCGTAACGCCGCGAGAGATCTTCTGACTCTCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD568295       --> TACTCTCTGAGCCGCATCCGTAACGCCGCCAGAGATCTTCTGACTCTCGA  Raphanus sativus cv Early Scarlet Globe
EY907775       --> TACTCTCTGAGCCGCATCCGTAACGCCGCGAGAGATCCTCTGACTCTCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY451881       --> TACTCTCTGAGCCGCATCCGTAACGCCGCCAGAGATCTTCTGACTCTCGA  Raphanus sativus cv GSK3-1
FY435496       --> TACTCTCTGAGCCGCATCCGTAACGCCGCCAGAGATCTTCTGACTCTCGA  Raphanus sativus cv GSK3-1
FY439073       --> TACTCTCTGAGCCGCATCCGTAACGCCGCCAGAGATCTTCTGACTCTCGA  Raphanus sativus cv GSK3-1
FY429302       --> TACTCTCTGAGCCGCATCCGTAACGCCGCCAGAGATCTTCTGACTCTCGA  Raphanus sativus cv GSK3-1
FY444350       --> TACTCTCTGAGCCGCATCCGTAACGCCGCCAGAGATCTTCTGACTCTCGA  Raphanus sativus cv GSK3-1
FD578048       --> TACTCTCTGAGCCGCATCCGTAACGCCGCCAGAGATCTTCTGACTCTCGA  Raphanus sativus cv Rat-Tail Radish #3870

               246    -    296
UN16419        --> CGAGAAGAATCCCAAGAGGATCTTTGAGGGAGAGGCCCTGCTAAGGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD572662       <-- CGAGAAGAATCCCAAGAGGATCTTTGAGGGAGAGGCCCTGCTAAGGAAGA  Raphanus sativus cv Early Scarlet Globe
FD538135       <-- CGAGAAGAATCCCAAGAGGATCTTTGAGGGAGAGGCGCTGCTAAGGAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD952439       <-- CGAGAAGAATCCCAAGAGGATCTTTGAGGGAGAGGCCCTGTTAAGGAAGA  Raphanus sativus cv Rat-Tail Radish #3870
EY901342       <-- CGAGAAGAATCCCAAGAGGATCTTTGAGGGAGAGGCGCTGCTAAGGAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945392       <-- CGAGAAGAATCCCAAGAGGATCTTTGAGGGAGAGGCCCTGCTAAGGAAGA  Raphanus sativus cv Rat-Tail Radish #3870
EY901511       <-- CGAGAAGAATCCCAAGAGGATCTTTGAGGGAGAGGCGCTGCTAAGGAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903631       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD582252       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY904750       --> CGAGAAGAATCCCAAGAGGATCTTTGAGGGAGAGGCGCTGCTAAGGAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907818       --> CGAGAAGAATCCCAAGAGGATCTTTGAGGGAGAGGCGCTGCTAAGGAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY949987       --> CGAGAAGAATCCCAAGAGGATCTTTGAGGGAGAGGCCCTGCTAAGGAAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD956585       --> CGAGAAGAATCCCAAGAGGATCTTTGAGGGAGAGGCCCTGCTAAGGAAGA  Raphanus sativus cv Rat-Tail Radish #3870
EY904968       --> CGAGAAGAATCCCAAGAGGATCTTTGAGGGAGAGGCGCTGCTAAGGAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541961       --> CGAGAAGAATCCCAAGAGGATCTTTGAGGGAGAGGCGCTGCTAAGGAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD568295       --> CGAGAAGAATCCCAAGAGGATCTTTGAGGGAGAGGCCCTGCTAAGGAAGA  Raphanus sativus cv Early Scarlet Globe
EY907775       --> CGAGAAGAATCCCAAGAGGATCTTTGAGGGAGAGGCGCTGCTAAGGAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY451881       --> CGAGAAGAATCCCAAGAGGATCTTTGAGGGAGAGGCCCTGCTAAGGAAGA  Raphanus sativus cv GSK3-1
FY435496       --> CGAGAAGAATCCCAAGAGGATCTTTGAGGGAGAGGCCCTGCTAAGGAAGA  Raphanus sativus cv GSK3-1
FY439073       --> CGAGAAGAATCCCAAGAGGATCTTTGAGGGAGAGGCCCTGCTAAGGAAGA  Raphanus sativus cv GSK3-1
FY429302       --> CGAGAAGAATCCCAAGAGGATCTTTGAGGGAGAGGCCCTGCTAAGGAAGA  Raphanus sativus cv GSK3-1
FY444350       --> CGAGAAGAATCCCAAGAGGATCTTTGAGGGAGAGGCCCTGCTAAGGAAGA  Raphanus sativus cv GSK3-1
FD578048       --> CGAGAAGAATCCCAAGAGGATCTTTGAGGGAGAGGCCCTGCTAAGGAAGA  Raphanus sativus cv Rat-Tail Radish #3870

               296    -    346
UN16419        --> TGAACCGGTACGGGCTTCTCGACGAGAGCCAGAACAAGCTCGATTACGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD572662       <-- TGAACCGGTACGGGCTTCTCGACGAGAGCCAGAACAAGCTCGATTACGTC  Raphanus sativus cv Early Scarlet Globe
FD538135       <-- TGAACCGGTACGGACTTCTCGACGAGAGCCAGAACAAGCTCGATTACGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD952439       <-- TGAACCGGTACGGGCTTCTCGACGAGAGCCAGAACAAGCTCGATTACGTC  Raphanus sativus cv Rat-Tail Radish #3870
EY901342       <-- TGAACCGGTACGGACTTCTCGACGAGAGCCAGAACAAGCTCGATTACGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945392       <-- TGAACCGGTACGGGCTTCTCGACGAGAGCCAGAACAAGCTCGATTACGTC  Raphanus sativus cv Rat-Tail Radish #3870
EY901511       <-- TGAACCGGTACGGACTTCTCGACGAGAGCCAGAACAAGCTCGATTACGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903631       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD582252       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY904750       --> TGAACCGGTACGGACTTCTCGACGAGAGCCAGAACAAGCTCGATTACGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907818       --> TGAACCGGTACGGACTTCTCGACGAGAGCCAGAACAAGCTCGATTACGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY949987       --> TGAACCGGTACGGGCTTCTCGACGAGAGCCAGAACAAGCTCGATTACGTC  Raphanus sativus cv Rat-Tail Radish #3870
FD956585       --> TGAACCGGTACGGGCTTCTCGACGAGAGCCAGAACAAGCTCGATTACGTC  Raphanus sativus cv Rat-Tail Radish #3870
EY904968       --> TGAACCGGTACGGACTTCTCGACGAGAGCCAGAACAAGCTCGATTACGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541961       --> TGAACCGGTACGGACTTCTCGACGAGAGCCAGAACAAGCTCGATTACGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD568295       --> TGAACCGGTACGGGCTTCTCGACGAGAGCCAGAACAAGCTCGATTACGTC  Raphanus sativus cv Early Scarlet Globe
EY907775       --> TGAATCGGTACGGACTTCTCGACGAGAGCCAGAACAAGCTCGATTACGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FY451881       --> TGAACCGGTACGGGCTTCTCGACGAGAGCCAGAACAAGCTCGATTACGTC  Raphanus sativus cv GSK3-1
FY435496       --> TGAACCGGTACGGGCTTCTCGACGAGAGCCAGAACAAGCTCGATTACGTC  Raphanus sativus cv GSK3-1
FY439073       --> TGAACCGGTACGGGCTTCTCGACGAGAGCCAGAACAAGCTCGATTACGTC  Raphanus sativus cv GSK3-1
FY429302       --> TGAACCGGTACGGGCTTCTCGACGAGAGCCAGAACAAGCTCGATTACGTC  Raphanus sativus cv GSK3-1
FY444350       --> TGAACCGGTACGGGCTTCTCGACGAGAGCCAGAACAAGCTCGATTACGTC  Raphanus sativus cv GSK3-1
FD578048       --> TGAACCGGTACGGGCTTCTCGACGAGAGCCAGAACAAGCTCGATTACGTC  Raphanus sativus cv Rat-Tail Radish #3870

               346    -    396
UN16419        --> TTGGCCTTGACGGTGGAGAACTTTCTTGAGCGTCGTCTTCAGACTATTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD572662       <-- TTGGCCTTGACGGTGGAGAACTTTCTTGAGCGTCGTCTTCAGACTATTGT  Raphanus sativus cv Early Scarlet Globe
FD538135       <-- TTGGCCTTGACGGTGGAGAACTTTCTCGAGCGTCGTCTTCAGACTATTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD952439       <-- TTGGCCTTGACGGTGGAGAACTTTCTTGAGCGTCGTCTTCAGACTATTGT  Raphanus sativus cv Rat-Tail Radish #3870
EY901342       <-- TTGGCCTTGACGGTGGAGAACTTTCTCGAGCGTCGTCTTCAGACTATTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945392       <-- TTGGCCTTGACGGTGGAGAACTTTCTTGAGCGTCGTCTTCAGACTATTGT  Raphanus sativus cv Rat-Tail Radish #3870
EY901511       <-- TTGGCCTTGACGGTGGAGAACTTTCTCGAGCGTCGTTTTCAGACTATTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903631       <-- .TGGCCTTGACGGTGGAGAACTTTCTCGAGCGTCGTCTTCAGACTATTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD582252       <-- ......................................TCAGACTATTGT  Raphanus sativus cv Rat-Tail Radish #3870
EY904750       --> TTGGCCTTGACGGTGGAGAACTTTCTCGAGCGTCGTCTTCAGACTATTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907818       --> TTGGCCTTGACGGTGGAGAACTTTCTCGAGCGTCGTCTTCAGACTATTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY949987       --> TTGGCCTTGACGGTGGAGAACTTTCTTGAGCGTCGTCTTCAGACTATTGT  Raphanus sativus cv Rat-Tail Radish #3870
FD956585       --> TTGGCCTTGACGGTGGAGAACTTTCTTGAGCGTCGTCTTCAGACTATTGT  Raphanus sativus cv Rat-Tail Radish #3870
EY904968       --> TTGGCCTTGACGGTGGAGAACTTTCTCGAGCGTCGTCTTCAGACTATTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541961       --> TTGGCCTTGACGGTGGAGAACTTTCTCGAGCGTCGTCTTCAGACTATTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD568295       --> TTGGCCTTGACGGTGGAGAACTTTCTTGAGCGTCGTCTTCAGACTATTGT  Raphanus sativus cv Early Scarlet Globe
EY907775       --> TTGGCCTTGACGGTGGAGAACTTTCTCGAGCGTCGTCTTCAGACTATTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY451881       --> TTGGCCTTGACGGTGGAGAACTTTCTTGAGCGTCGTCTTCAGACTATTGT  Raphanus sativus cv GSK3-1
FY435496       --> TTGGCCTTGACGGTGGAGAACTTTCTTGAGCGTCGTCTTCAGACTATTGT  Raphanus sativus cv GSK3-1
FY439073       --> TTGGCCTTGACGGTGGAGAACTTTCTTGAGCGTCGTCTTCAGACTATTGT  Raphanus sativus cv GSK3-1
FY429302       --> TTGGCCTTGACGGTGGAGAACTTTCTTGAGCGTCGTCTTCAGACTATTGT  Raphanus sativus cv GSK3-1
FY444350       --> TTGGCCTTGACGGTGGAGAACTTTCTTGAGCGTCGTCTTCAGACTATTGT  Raphanus sativus cv GSK3-1
FD578048       --> TTGGCCTTGACGGTGGAGAACTCTCTTGAGCGTCGTCTTCAGACTATTGT  Raphanus sativus cv Rat-Tail Radish #3870

               396    -    446
UN16419        --> GTTTAAGTCTGGTATGGCTAAGTCTATCCATCACTCCCGTGTCCTCATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD572662       <-- GTTTAAGTCTGGTATGGCTAAGTCTATCCATCACTCCCGTGTCCTCATCA  Raphanus sativus cv Early Scarlet Globe
FD538135       <-- GTTCAAGTCTGGTATGGCTAAGTCTATCCATCACTCCCGTGTCCTCATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD952439       <-- GTTTAAGTCTGGTATGGCTAAGTCTATCCATCACTCCCGTGTCCTCATCA  Raphanus sativus cv Rat-Tail Radish #3870
EY901342       <-- GTTCAAGTCTGGTATGGCTAAGTCTATCCATCACTCCCGTGTCCTCATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945392       <-- GTTTAAGTCTGGTATGGCTAAGTCTATCCATCACTCCCGTGTCCTCATCA  Raphanus sativus cv Rat-Tail Radish #3870
EY901511       <-- GTTCAAGTCTGGTATGGCTAAGTCTATCCATCACTCCCGTGTCCTCATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903631       <-- GTTCAAGTCTGGTATGGCTAAGTCTATCCATCACTCCCGTGTCCTCATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD582252       <-- GTTTAAGTCTGGTATGGCTAAGTCTATCCATCACTCCCGTGTCCTCATCA  Raphanus sativus cv Rat-Tail Radish #3870
EY904750       --> GTTCAAGTCTGGTATGGCTAAGTCTATCCATCACTCCCGTGTCCTCATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907818       --> GTTCAAGTCTGGTATGGCTAAGTCTATCCATCACTCCCGTGTCCTCATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY949987       --> GTTTAAGTCTGGTATGGCTAAGTCTATCCATCACTCCCGTGTCCTCATCA  Raphanus sativus cv Rat-Tail Radish #3870
FD956585       --> GTTTAAGTCTGGTATGGCTAAGTCTATCCATCACTCCCGTGTCCTCATCA  Raphanus sativus cv Rat-Tail Radish #3870
EY904968       --> GTTCAAGTCTGGTATGGCTAAGTCTATCCATCACTCCCGTGTCCTCATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541961       --> GTTCAAGTCTGGTATGGCTAAGTCTATCCATCACTCCCGTGTCCTCATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD568295       --> GTTTAAGTCTGGTATGGCTAAGTCTATCCATCACTCCCGTGTCCTCATCA  Raphanus sativus cv Early Scarlet Globe
EY907775       --> GTTCAAGTCTGGTATGGCTAAGTCTATCCATCACTCCCGTGTCCTCATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY451881       --> GTTTAAGTCTGGTATGGCTAAGTCTATCCATCACTCCCGTGTCCTCATCA  Raphanus sativus cv GSK3-1
FY435496       --> GTTTAAGTCGGGTATGGCTAAGTCTATCCATCACTCCCGTGTCCTCATCA  Raphanus sativus cv GSK3-1
FY439073       --> GTTTAAGTCTGGTATGGCTAAGTCTATCCATCACTCCCGTGTCCTCATCA  Raphanus sativus cv GSK3-1
FY429302       --> GTTTAAGTCTGGTATGGCTAAGTCTATCCATCACTCCCGTGTCCTCATCA  Raphanus sativus cv GSK3-1
FY444350       --> GTTTAAGTCTGGTATGGCTAAGTCTATCCATCACTCCCGTGTCCTCATCA  Raphanus sativus cv GSK3-1
FD578048       --> GTTTAAGTCTGGTATGGCTAAGTCTATCCATCACTCCCGTGTCCTCATCA  Raphanus sativus cv Rat-Tail Radish #3870

               446    -    496
UN16419        --> GGCAGAGGCATATCAGGGTTGGAAAGCAATTGGTGAACATTCCTTCGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD572662       <-- GGCAGAGGCATATCAGGGTTGGAAAGCAATTGGTGAACATTCCTTCGTTC
FD538135       <-- GGCAGAGGCATATCAGGGTTGGAAAGCAATTGGTGAACATTCCTTCGTTC
FD952439       <-- GGCAGAGGCATATCAGGGTTGGAAAGCAATTGGTGAACATTCCTTCGTTC
EY901342       <-- GGCAGAGGCATATCAGGGTTGGAAAGCAATTGGTGAACATTCCTTCGTTC
EY945392       <-- GGCAGAGGCATATCAGGGTTGGAAAGCAATTGGTGAACATTCCTTCGTTC
EY901511       <-- GGCAGAGGCATATCAGGGTTGGAAAGCAATTGGTGAACATTCCTTCGTTC
EY903631       <-- GGCAGAGGCATATCAGGGTTGGAAAGCAGTTGGTGAACTTTCCTTCGTTC
FD582252       <-- GTCAGAGGCATATCAGGGTTGGAAAGCAATTGGTGAACATTCCTTCGTTC
EY904750       --> GGCAGAGGCATATCAGGGTTGGAAAGCAATTGGTGAACATTCCTTCGTTC
EY907818       --> GGCAGAGGCATATCAGGGTTGGAAAGCAATTGGTGAACATTCCTTCGTTC
EY949987       --> GGCAGAGGCATATCAGGGTTGGAAAGCAATTGGTGAACATTCCTTCGTTC
FD956585       --> GGCAGAGGCATATCAGGGTTGGAAAGCAATTGGTGAACATTCCTTCGTTC
EY904968       --> GGCAGAGGCATATCAGGGTTGGAAAGCAATTGGTGAACATTCCTTCGTTC
FD541961       --> GGCAGAGGCATATCAGGGTTGGAAAGCAATTGGTGAACATTCCTTCGTTC
FD568295       --> GGCAGAGGCATATCAGGGTTGGAAAGCAATTGGTGAACATTCCTTCGTTC
EY907775       --> GGCAGAGGCATATCAGGGTTGGAAAGCAGTTGGTGAACTTTCCTTCGTTC
FY451881       --> GGCAGAGGCATATCAGGGTTGGAAAGCAATTGGTGAACATTCCTTCGTTC
FY435496       --> GGCAGAGGCATATCAGGGTTGGAAAGCAATTGGTGAACATTCCTTCGTTC
FY439073       --> GGCAGAGGCATATCAGGGTTGGAAAGCAATTGGTGAACATTCCTTCGTTC
FY429302       --> GGCAGAGGCATATCAGGGTTGGAAAGCAATTGGTGAACATTCCTTCGTTC
FY444350       --> GGCAGAGGCATATCAGGGTTGGAAAGCAATTGGTGAACATTCCTTCGTTC
FD578048       --> GTCAGAGGCATATCAGGGTTGGAAAGCAATTGGTGAACATTCCTTCGTTC

               496    -    546
UN16419        --> ATGGTGAGACTTGACTCGCAGAAACACATCGACTTTGCATTGACCAGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD572662       <-- ATGGTGAGACTTGACTCGCAGAAACACATCGACTTTGCATTGACCAGTCC
FD538135       <-- ATGGTGAGACTTGACTCGCAGAAACACATCGACTTTGCATTGACCAGTCC
FD952439       <-- ATGGTGAGACTTGACTCGCAGAAACACATCGACTTTGCATTGACCAGTCC
EY901342       <-- ATGGTGAGACTTGACTCGCAGAAACACATCGACTTTGCATTGACCAGTCC
EY945392       <-- ATGGTGAGACTTGACTCGCAGAAACACATCGACTTTGCATTGACCAGTCC
EY901511       <-- ATGGTGAGACTTGACTCGCAGAAACACATCGACTTTGCATTGACCAGTCC
EY903631       <-- ATGGTGAGACTTGACTCGCAGAAACACATCGACTTTGCATTGACCAGTCC
FD582252       <-- ATGGTGAGACTTGACTCGCAGAAACACATCGACTTTGCATTGACCAGTCC
EY904750       --> ATGGTGAGACTTGACTCGC...............................
EY907818       --> ATGGTGAGACTTGACTCGCAGAAACACATCGACTTTGCATTGACCAGTCC
EY949987       --> ATGGTGAGACTTGACTCGCAGAAACACATCGACTTTGCATTGACCAGTCC
FD956585       --> ATGGTGAGACTTGACTCGCAGAAACACATCGACTTTGCATTGACCAGTCC
EY904968       --> ATGGTGAGACTTGACTCGCAGAAACACATCGACTTTGCATTGACCAGTCC
FD541961       --> ATGGTGAGACTTGACTCGCAGAAACACATCGACTTTGCATTGACCAGTCC
FD568295       --> ATGGTGAGACTTGACTCGCAGAAACACATCGACTTTGCATTGACCAGTCC
EY907775       --> ATGGTGAGACTTGACTCGCAGAAACACATCGACTTTGCATTGACCAGTCC
FY451881       --> ATGGTGAGACTTGACTCGCAGAAACACATCGACTTTGCATTGACCAGTCC
FY435496       --> ATGGTGAGACTTGACTCGCAGAAACACATCGACTTTGCATTGACCAGTCC
FY439073       --> ATGGTGAGACTTGACTCGCAGAAACACATCGACTTTGCATTGACCAGTCC
FY429302       --> ATGGTGAGACTTGACTCGCAGAAACACATCGACTTTGCATTGACCAGTCC
FY444350       --> ATGGTGAGACTTGACTCGCAGAAACACATCGACTTTGCATTGACCAGTCC
FD578048       --> ATGGTGAGACTTGACTCGCAGAAACACATCGACTTTGCATTGACCAGTCC

               546    -    596
UN16419        --> CTTCGGTGGTGGCCGTCCAGGAAGAGTGAAGAGAAGGAACGAGAAGTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD572662       <-- CTTCGGTGGTGGCCGTCCATGAAGAGTGAAGAGAAGGAACGAGAAGTCTG
FD538135       <-- CTTCGGTGGTGGCCGTCCAGGAAGAGTGAAGAGAAGGAACGAGAAGTCTG
FD952439       <-- CTTCGGTGGTGGCCGTCCAGGAAGAGTGAAGAGAAGGAACGAGAAGTCTG
EY901342       <-- CTTCGGTGGTGGCCGTCCAGGAAGAGTGAAGAGAAGGAACGAGAAGTCTG
EY945392       <-- CTTCGGTGGTGGCCGTCCAGGAAGAGTGAAGAGAAGGAACGAGAAGTCTG
EY901511       <-- CTTCGGTGGTGGCCGTCCAGGAAGAGTGAAGAGAAGGAACGAGAAGTCTG
EY903631       <-- CTTCGGTGGTGGCCGTCCAGGAAGAGTGAAGAGAAGGAACGAGAAGCCTG
FD582252       <-- CTTCGGTGGTGGCCGTCCAGGAAGAGTGAAGAGAAGGAACGAGAAGTCTG
EY904750       --> ..................................................
EY907818       --> CTTCGGTGGTGGCCGTCCAGGAAGAGTGAAGAGAAGGAACGAGAAGTCTG
EY949987       --> CTTCGGTGGTGGCCGTCCAGGAAGAGTGAAGAGAAAGAACGAGAAGTCTG
FD956585       --> CTTCGGTGGTGGCCGTCCAGGAAGAGTGAAGAGAAGGAACGAGAAGTCTG
EY904968       --> CTTCGGTGGTGGCCGTCCAGGAAGAGTGAAGAGAAGGAACGAGAAGTCTG
FD541961       --> CTTCGGTGGTGGCCGTCCAGGAAGAGTGAAGAGAAGGAACGAGAAGTCTG
FD568295       --> CTTCGGTGGTGGCCGTCCATGAAGAGTGAAGAGAAGGAACGAGAAGTCTG
EY907775       --> CTTCGGTGGTGGCCGTCCAGGAAGAGTGAAGAGAAAGAACGAGAAGCCTG
FY451881       --> CTTCGGTGGTGGCCGTCCAGGAAGAGTGAAGAGAAGGAACGAGAAGTCTG
FY435496       --> CTTCGGTGGTGGCCGTCCAGGAAGAGTGAAGAGAAGGAACGAGAAGTCTG
FY439073       --> CTTCGGTGGTGGCCGTCCAGGAAGAGTGAAGAGAAGGAACGAGAAGTCTG
FY429302       --> CTTCGGTGGTGGCCGTCCAGGAAGAGTGAAGAGAAGGAACGAGAAGTCTG
FY444350       --> CTTCGGTGGTGGCCGTCCAGGAAGAGTGAAGAGAAGGAACGAGAAGTCTG
FD578048       --> CTTCGGTGGTGGCCGTCCAGGAAGAGTGAAGAGAAGGAACGAGAAGTCTG

               596    -    646
UN16419        --> CGTCCAAGAAAGCCTCTGGTGGCGACGCTGACGGTGATGACGAAGAGTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD572662       <-- CGTCCAAGAAAGCCTCTGGTGGCGACGCTGACGGTGATGACGAAGAGTAA  Raphanus sativus cv Early Scarlet Globe
FD538135       <-- CGTCCAAGAAAGCCTCTGGTGGCGACGCTGACGGTGATGACGAAGAGTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD952439       <-- CGTCCAAGAAAGCCTCTGGTGGCGACGCTGACGGTGATGACGAAGAGTAA  Raphanus sativus cv Rat-Tail Radish #3870
EY901342       <-- CGTCCAAGAAAGCCTCTGGTGGCGACGCTGACGGTGATGACGAAGAGTAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945392       <-- CGTCCAAGAAAGCCTCTGGTGGCGACGCTGACGGTGATGACGAAGAGTAA  Raphanus sativus cv Rat-Tail Radish #3870
EY901511       <-- CGTCCAAGAAAGCCTCTGGTGGCGACGCTGACGGTGATGACGAAGAGTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903631       <-- CGTCCAAGAAAGCCTCTGGTGGCGACGCTGACGGTGATGACGAAGAGTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD582252       <-- CGTCCAAGAAAGCCTCTGGTGGCGACGCTGACGGTGATGACGAAGAGTAA  Raphanus sativus cv Rat-Tail Radish #3870
EY904750       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907818       --> CGTACAAGAAAGCCTCTGGTGGCGACGCTGACGGTGATGACGAAGAGTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY949987       --> CGTCCAAGAAAGCCTCTGGTGGCGACGCTGACGGTGATGACGA-GAGTAA  Raphanus sativus cv Rat-Tail Radish #3870
FD956585       --> CGTCCAAGAAAGCCTCTGGTGGCGACGCTGACGGTGATGACGAAGAGTAA  Raphanus sativus cv Rat-Tail Radish #3870
EY904968       --> CGTCCAAGAAAGCCTCTGGTGGCGACGCTGACGGTGATGACGAAGAGTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541961       --> CGTCCAAGAAAGCCTCTGGTGGCGACGCTGACG-TGATGACGAAGAGTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD568295       --> CGTCCAAGAAAGCCTCTGGTGGCGACGCTGACGGTGATGACGAAGAGTAA  Raphanus sativus cv Early Scarlet Globe
EY907775       --> CGTCCAAGAAAGCCTCTGGTGGCGACGCTGACGGTGATGACGAAGAGTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY451881       --> CGTCCAAGAAAGCCTCTGGTGGCGACGCTGACGGTGATGACGAAGAGTAA  Raphanus sativus cv GSK3-1
FY435496       --> ..................................................  Raphanus sativus cv GSK3-1
FY439073       --> CGTCCAAGAAAGCCTCTGGTGGCGACGCTGACGGTGATGACGAAGAGTAA  Raphanus sativus cv GSK3-1
FY429302       --> CGTCCAAGAAAGCCTCTGGTGGCGACGCTGACGGTGATGACGAAGAGTAA  Raphanus sativus cv GSK3-1
FY444350       --> CGTCCAAGAAAGCCTCTGGTGGCGACGCTGACGGTGATGACGAAGAGTAA  Raphanus sativus cv GSK3-1
FD578048       --> CGTCCAAGAAAGCCTCTGGTGGCGACGCTGACGGTGATGACGAAGAGTAA  Raphanus sativus cv Rat-Tail Radish #3870

               646    -    696
UN16419        --> ACTCCCAACTCTCGCCGCCTGCTTTT-AGCTATGAAGCACTCTGCTTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD572662       <-- ACTCCCAACTCTCGCCGCCTGCTTTT-AGCTATGAAGCACTCTGCTTTTT  Raphanus sativus cv Early Scarlet Globe
FD538135       <-- TCCCCCAACTCTCACCGCCTGCTTTTTAGCTATGAAGCACTCTGCTTTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD952439       <-- ACTCCCAACTCTCGCCGCCTGCTTTT-AGCTATGAAGCACTCTGCTTTTT  Raphanus sativus cv Rat-Tail Radish #3870
EY901342       <-- TCCCCCAACTCTCACCGCCTGCTTTTTAGCTATGAAGCACTCTGCTTTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945392       <-- ACTCCCAACTCTCGCCGCCTGCTTTT-AGCTATGAAGCACTCTGCTTTTT  Raphanus sativus cv Rat-Tail Radish #3870
EY901511       <-- TCCCCCAACTCTCACCGCCTGCTTTTTAGCTATGAAGCACTCTGCTTTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903631       <-- TCCCCCAACTCTCACCGCCTGCTTTTTAGCTATGAAGCACTCTGCTTTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD582252       <-- ACTCCCAACTCTCGCCGCCTGCTTTT-AGCTATGAAGCACTCTGCTTTTT  Raphanus sativus cv Rat-Tail Radish #3870
EY904750       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907818       --> TCCCCCAACTCTCACCGCCTGCTTTTTAGCTATGAAGCACTCTGCTTTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY949987       --> ACTCCCAACTCTCGCCGCCTGCTTTT-AGCTATGA-GCACTCTGCTTTT-  Raphanus sativus cv Rat-Tail Radish #3870
FD956585       --> ACTCCCAACTCTCGCCGCCTGCTTTT-AGCTATGAAGCACTCTGCTTTT-  Raphanus sativus cv Rat-Tail Radish #3870
EY904968       --> TCCCCCAACTCTCACCGCCTGCTTTTTAGCTATGAAGCACTCTGCTTTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541961       --> TCCCCCAACTCTCACCGCCTGCTTTTTAGCTATGAAGCACTCTGCTTTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD568295       --> ACTCCCAACTCTCGCCGCCTGCTTTT-AGCTATGAAGCACTCTGCTTTTT  Raphanus sativus cv Early Scarlet Globe
EY907775       --> TCCCCCAACTCTCACCGCCTGCTTTTTAGCTATGAAGCACTCTGCTTTT-  Raphanus raphanistrum subsp. raphanistrum (MS)
FY451881       --> ACTCCCAACTCTCGCCGCCTGCTTTT-AGCTATGAAGCACTCTGCTTTTT  Raphanus sativus cv GSK3-1
FY435496       --> ..................................................  Raphanus sativus cv GSK3-1
FY439073       --> ACTCCCAACTCTCGCCGCCTGCTTTT-AGCTATGAAGCACTCTGCTTTTT  Raphanus sativus cv GSK3-1
FY429302       --> ACTCCCAACTCTCGCCGCCTGCTTTT-AGCTATGAAGCACTCTGCTTTTT  Raphanus sativus cv GSK3-1
FY444350       --> ACTCCCAACTCTCGCCGCCTGCTTTT-AGCTATGAAGCACTCTGCTTTTT  Raphanus sativus cv GSK3-1
FD578048       --> ACTCCCAACTCTCGCCGCCTGCTTTT-AGCTATGAAGCACTCTGCTTTTT  Raphanus sativus cv Rat-Tail Radish #3870

               696    -    746
UN16419        --> GATATCTTT-AGTTTTGAATTTCCTCTTTTCAGACGATTGTTTTGTGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD572662       <-- GATATCTTT-AGTTTTGAATTTCCTCTTTTCAGACGATTGTTTTGTGGTT  Raphanus sativus cv Early Scarlet Globe
FD538135       <-- GATATCTTTTAGTTTTGAATTT--CGTTTTCAGACGATTGTTTTGTGGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD952439       <-- GATATCTTT-AGTTTTGAATTTCCTCTTTTCAGACGATTGTTTTGTGGTT  Raphanus sativus cv Rat-Tail Radish #3870
EY901342       <-- GATATCTTTTAGTTTTGAATTT--CGTTTTCAGACGATTGTTTTGTGGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945392       <-- GATATCTTT-AGTTTTGAATTTCCTCTTTTCAGACGATTGTTTTGTGGTT  Raphanus sativus cv Rat-Tail Radish #3870
EY901511       <-- GATATCTTTTAGTTTTGAATTT--CGTTTTCAGACGATTGTTTTGTGGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903631       <-- GATATCTTTTAGTTTTGAATTT--CGTTTTCAGACGATTGTTTTGTGGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD582252       <-- GATATCTTT-AGTTTTGAATTTCCTCTTTTCAGACGATTGTTTTGTGGTT  Raphanus sativus cv Rat-Tail Radish #3870
EY904750       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907818       --> GATATCTTTTAGTTTTGAATTTCgt.........................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY949987       --> GATATCTTT-AGTTT-G-ATTT-CTCTTTT-AGACGATTGTTT-GTGGTT  Raphanus sativus cv Rat-Tail Radish #3870
FD956585       --> GATATCTTT-AGTTTTGA-TTTCCTCTTTTCAGACGATTGTTTTGTGGTT  Raphanus sativus cv Rat-Tail Radish #3870
EY904968       --> GATATCTTTTAGTTTTGAATTTC--GTTTTCAGACGATTGTTTTGTGGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541961       --> GATATCTTTTAGTTTTGAATTTC--GTTTTCAGACGATTGTTTTGTGGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD568295       --> GATATCTTT-AGTTTTGAATTTCCTCTTTTCAGACGATTGTTTTGTGGTT  Raphanus sativus cv Early Scarlet Globe
EY907775       --> GATATCTTT.........................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY451881       --> GATATCTTT-AGTTTTGAATTTCCTCTTTTCAGACGATTGTTTTGTGGTT  Raphanus sativus cv GSK3-1
FY435496       --> ..................................................  Raphanus sativus cv GSK3-1
FY439073       --> GATATCTTT-AGTTTTGAATTTCCTCTTTTCAGACGATTGTTTTGTGGTT  Raphanus sativus cv GSK3-1
FY429302       --> GATATCTTT-AGTTTTGAATTTCCTCTTTTCAGACGATTGTTTTGTGGTT  Raphanus sativus cv GSK3-1
FY444350       --> GATATCTTT-AGTTTTGAATTTCCTCTTTTCAGACGATTGTTTTGTGGTT  Raphanus sativus cv GSK3-1
FD578048       --> GATATCTTT-AGTTTTGAATTTCCTCTTTTCAGACGATTGTTTTGTGGTT  Raphanus sativus cv Rat-Tail Radish #3870

               746    -    796
UN16419        --> TCTTTGTGTGTCGAACCTTTCTCGAGTTATATTTTATTTTGAGACAAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD572662       <-- TCTTTGTGTGTCGAACCTTTCTCGAGTTATATTTTATTTTGAGgc.....
FD538135       <-- TCTTTGTGTGTCGAACCCTTCTCGAGTTATATTTTATTTTGGGACAAAAA
FD952439       <-- TCTTTGTGTGTCGACCCTTTCTCGAGTTATATTTTATTTTGAGAC.....
EY901342       <-- TCTTTGTGTGTCGAACCTTTCTCGAGTTATATTTTATTTTGAGACAAAAA
EY945392       <-- TCTTTGTGTGTCGAACCTTTCTCGAGTTATATTTTATTTTGAGACAAAAA
EY901511       <-- TCTTTGTGTGTCGAACCTTTCTCGAGTTATATTTTATTTTGAGAC.....
EY903631       <-- TCTTTGTGTGTCGAACCTTTCTCGAGTTATATTTTATTTTGAGACAAAAA
FD582252       <-- TCTTTGTGTGTCGAACCTTTCTCGAGTTATATTTTATTTTGAGACAAAAA
EY904750       --> ..................................................
EY907818       --> ..................................................
EY949987       --> TCTT-GTGTGTCG.....................................
FD956585       --> TCTTTGTGTGTCGA-CCTTTCTCGAGT.......................
EY904968       --> TCTTTGTGTGTC......................................
FD541961       --> TCTTTG............................................
FD568295       --> TCTTTGTGTGTCGAACCTTTCTCGAGTTATATTTTA..............
EY907775       --> ..................................................
FY451881       --> TCTTTGTGTGTCGAACCTTTCTCGAGTTATATTTTATTTTGAGAC.....
FY435496       --> ..................................................
FY439073       --> TCTTTGTGTGTCGAACCTTTCTCGAGTTATATTTTATTTTGAGAC.....
FY429302       --> TCTTTGTGTGTCGAACCTTTCTCGAGTTATATTTTATTTTGAGACAAAAA
FY444350       --> TCTTTGTGTGTCGAACCTTTCTCGAGTTATATTTTATTTTGAGAC.....
FD578048       --> TCTTTGTGTGTCGAACCTTTCTCGAGTTATATTTTATTTTGAGACAAAAA

               796    -    846
UN16419        --> ATGATCGTCCTTTTGCTAAAGCTTAAATGTCTTGTGGGCCTAATGGTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD572662       <-- ..................................................
FD538135       <-- ATGATCG...........................................
FD952439       <-- ..................................................
EY901342       <-- AT................................................
EY945392       <-- ATGATCGTCCTTTTGCTAAAGCTTAAATGTCTTGTGGGCCT.........
EY901511       <-- ..................................................
EY903631       <-- -TGATCGTCCTTTTGCTAAAGCTTAAATGTCTTGTGGGCCTAATGGTTGC
FD582252       <-- ATGATCGTCCTTTTGCTAAAGCTTAAATGTCTTGTGGGCCTAATGGTTGC
EY904750       --> ..................................................
EY907818       --> ..................................................
EY949987       --> ..................................................
FD956585       --> ..................................................
EY904968       --> ..................................................
FD541961       --> ..................................................
FD568295       --> ..................................................
EY907775       --> ..................................................
FY451881       --> ..................................................
FY435496       --> ..................................................
FY439073       --> ..................................................
FY429302       --> ATGATCGTCCTTTTGCTAAAGCTTAAATGTCTTGTGGGCCTAATGGTTGC
FY444350       --> ..................................................
FD578048       --> ATGATCGTCCTTTTGCTAAAGCTTAAATGTCTTGTGGGCCTAATGGTTGC

               846    -    896
UN16419        --> TTATGTAATAACGCAACCTCTTTAGGGTTATTGCATTAGTTGTTTGCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD572662       <-- ..................................................
FD538135       <-- ..................................................
FD952439       <-- ..................................................
EY901342       <-- ..................................................
EY945392       <-- ..................................................
EY901511       <-- ..................................................
EY903631       <-- TTATGTAATAACGCAACCTCTTTAGGGTTATTACATTAGT..........
FD582252       <-- TTATGTAATAACGCAACCTCTTTAGGGTTATTGCATTAGTTGTTTGCCTT
EY904750       --> ..................................................
EY907818       --> ..................................................
EY949987       --> ..................................................
FD956585       --> ..................................................
EY904968       --> ..................................................
FD541961       --> ..................................................
FD568295       --> ..................................................
EY907775       --> ..................................................
FY451881       --> ..................................................
FY435496       --> ..................................................
FY439073       --> ..................................................
FY429302       --> TTATGTAATAACGCAACCTCTTTAGGGT-ATTGCATTAGTTGTTTGCCTT
FY444350       --> ..................................................
FD578048       --> TTATGTAATAACGCAACC................................

               896    -    946
UN16419        --> CGGTCCGTTAAAATTTGTTTATTTCATCTAAATCCTATTTTATTATTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD572662       <-- .................................................
FD538135       <-- .................................................
FD952439       <-- .................................................
EY901342       <-- .................................................
EY945392       <-- .................................................
EY901511       <-- .................................................
EY903631       <-- .................................................
FD582252       <-- CGGTCCGTTAAAATTTGTTTATTTCATCTAAATCCTATTTTATTATTCC
EY904750       --> .................................................
EY907818       --> .................................................
EY949987       --> .................................................
FD956585       --> .................................................
EY904968       --> .................................................
FD541961       --> .................................................
FD568295       --> .................................................
EY907775       --> .................................................
FY451881       --> .................................................
FY435496       --> .................................................
FY439073       --> .................................................
FY429302       --> C................................................
FY444350       --> .................................................
FD578048       --> .................................................