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Alignment for radish unigene UN16461

               1      -     51
UN16461        --> GCTCGAAATAAATTGGTATACTGATGATGGTGGTGGTGCCCAGAAAAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989598       <-- .......................................CCAGAAAAAGT
FD569680       <-- ..........................................ggAAAAGT
FY448997       <-- ..................................................
FY450137       <-- ..................................................
FY448991       <-- ..................................................
FD532282       <-- ..................................................
EV569250       <-- ..................................................
FD579668       <-- ..................................................
EX750384       <-- ..................................................
FD568518       <-- ..................................................
FD532668       <-- ..................................................
FD583610       --> GCTCGAAATAAATTGGTATACTGATGATGGTGGTGGTGCCCAGAAAAAGT
FD976453       --> GCTCGAAATAAATTGGTATACTGATGATGGTGGTGGTGCCCAGAAAAAGT
EX753854       --> .................ggtacacTGATGATGGTGGTGCCCAGAAAAAGT
FD985357       --> ............................GGTGGTGGTGCCCAGAAAAAGT
EV573834       --> .....................................GCCCAGAAAAAGT
EY896263       --> .....................................aCCCAGAAAAAGT
FD573840       --> ..........................................ggAAAAGT

               51     -    101
UN16461        --> TTGATACTAAACATTAATGGAAACACATTAACATGATGTAATAACGATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989598       <-- TTG-TACTAAACATGAATGGAAACACATTAACATTATGTAATAACGATCT  Raphanus raphanistrum subsp. landra
FD569680       <-- TTGATACTAAACATTAATGGAAACACATTAACATGATGTAATAACGATCT  Raphanus sativus cv Early Scarlet Globe
FY448997       <-- ..................................................  Raphanus sativus cv GSK3-1
FY450137       <-- ..................................................  Raphanus sativus cv GSK3-1
FY448991       <-- ..................................................  Raphanus sativus cv GSK3-1
FD532282       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV569250       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD579668       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX750384       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD568518       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD532668       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD583610       --> TTGATACTAAACATTAATGGAAACACATTAACATGATGTAATAACGATCT  Raphanus sativus cv Rat-Tail Radish #3870
FD976453       --> TTGATACTAAACATTAATGGAAACACATTAACATGATGTAATAACGATCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX753854       --> TTGATACTAAACATGAATGGAAACACATTAACATGATGTAATAACGATCT  Raphanus raphanistrum subsp. maritimus
FD985357       --> TTGGTACTAAACATGAATGGAAACACATTAACATTATGTAATAACGATCT  Raphanus raphanistrum subsp. landra
EV573834       --> TTGATACTAAACATGAATGGAAACACATTAACATTATGTAATAACGATCT  Raphanus raphanistrum subsp. landra
EY896263       --> TTGATACTAAACATTAATGGAAACACATTAACATGATGTAATAACGATCT  Raphanus raphanistrum subsp. maritimus
FD573840       --> TTGATACTAAACATTAATGGAAACACATTAACATGATGTAATAACGATCT  Raphanus sativus cv Early Scarlet Globe

               101    -    151
UN16461        --> ATTTTCTTTTTCAGCAGAAACCATTGCTTATCTATTTTGTACTAAGATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989598       <-- ATTTTCTTTT-CAGCAGAAACCATTGCT-ATCCATTTTGTACTAAGATCC
FD569680       <-- ATTTTCTTTTTCAGCAGAAACCATTGCTTATCTATTTTGTACTAAGATCC
FY448997       <-- ..................................................
FY450137       <-- ..................................................
FY448991       <-- ..................................................
FD532282       <-- ..................................................
EV569250       <-- ..................................................
FD579668       <-- ..................................................
EX750384       <-- ..................................................
FD568518       <-- ..................................................
FD532668       <-- ..................................................
FD583610       --> ATTTTCTTTTTCAGCAGAAACCATTGCTTATCTATTTTGTACTAAGATCC
FD976453       --> ATTTTCTTTTTCAGCAGAAACCATTGCTTATCTATTTTGTACTAAGATCC
EX753854       --> ATTTTCTTTTTTAGCAGAAACCATTGCTTATCTATTTTGTACTAAGATCC
FD985357       --> ATTTTCTTTTTCAGCAGAAACCATTGCT-ATCCATTTTGTACTAAGATCC
EV573834       --> ATTTTCTTTTTCAGCAGAAACCATTGCTTATCTATTTTGTACTAAGATCC
EY896263       --> ATTTTCTTTTTCAGCAGAAACCATTGCTTATCTATTTTGTACTAAGATCC
FD573840       --> ATTTTCTTTTTCAGCAGAAACCATTGCTTATCTATTTTGTACTAAGATCC

               151    -    201
UN16461        --> TCCTATCCTCACTTAGCTTAA-GGCTCTCTGAGACAGCCTCCTGGTAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989598       <-- TCCTATCCTCACTTAGCTTAAAGGCTCTCTGAGACAGCCTCCTGGTAGGA  Raphanus raphanistrum subsp. landra
FD569680       <-- TCCTATCCTCACTTAGCTTAA-GGCTCTCTGAGACAGCCTCCTGGTAGGA  Raphanus sativus cv Early Scarlet Globe
FY448997       <-- ..................................................  Raphanus sativus cv GSK3-1
FY450137       <-- ..................................................  Raphanus sativus cv GSK3-1
FY448991       <-- ..................................................  Raphanus sativus cv GSK3-1
FD532282       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV569250       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD579668       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX750384       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD568518       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD532668       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD583610       --> TCCTATCCTCACTTAGCTTAAAGGCTCTCTGAAACAGCCTCCTGGTAGGA  Raphanus sativus cv Rat-Tail Radish #3870
FD976453       --> TCCTATCCTCACTTAGCTTAA-GGCTCTCTGAGACAGCCTCCTGGTAGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX753854       --> TCCTATCCTCACTTAGCT-AA-GGCTCTCTGAGACAGCCTCCTGGTAAGA  Raphanus raphanistrum subsp. maritimus
FD985357       --> TCCTATCCTCACTTAGCTTAAAGGCTCTCTGAGACAGCCTCCTGGTAGGA  Raphanus raphanistrum subsp. landra
EV573834       --> TCCTATCCTCACTTAGCTTAAAGGCTCTCTGAGACAGCCTCCTGGTAGGA  Raphanus raphanistrum subsp. landra
EY896263       --> TCCTATCCTCACTTAGCTTAA-GGCTCTCTGAGACAGCCTCCTGGTAGGA  Raphanus raphanistrum subsp. maritimus
FD573840       --> TCCTATCCTCACTTAGCTTAA-GGCTCTCTGAGACAGCCTCCTGGTAGGA  Raphanus sativus cv Early Scarlet Globe

               201    -    251
UN16461        --> GAAACCGAAAGCGAGGCGCATTCTGAATCAAAAACGCAGGTAGATGCACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989598       <-- GAAAACGAAAGCGGGCGGCATTCTGAATCAAAAACGCAGGTAGATGCACA  Raphanus raphanistrum subsp. landra
FD569680       <-- GAAACCGAAAGCGAGGCGCATTCTGAATCAAAAACGCAGGTAGATGTACA  Raphanus sativus cv Early Scarlet Globe
FY448997       <-- ..................................................  Raphanus sativus cv GSK3-1
FY450137       <-- ..................................................  Raphanus sativus cv GSK3-1
FY448991       <-- ..................................................  Raphanus sativus cv GSK3-1
FD532282       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV569250       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD579668       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX750384       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD568518       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD532668       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD583610       --> AAAACCGAAAGCGGGGGGCATTCTGAATCAAAAACGCAGGTAGATGCACA  Raphanus sativus cv Rat-Tail Radish #3870
FD976453       --> GAAACCGAAAGCGAGGCGCATTCTGAATCAAAAACGCAGGTAGATGTACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX753854       --> GAAAACGAAAGCGGGGGGCATTCTGAATCAAAAACGCAGGTAGATGCACA  Raphanus raphanistrum subsp. maritimus
FD985357       --> GAAAACGAAAGCGGGCGGCATTCTGAATCAAAAACGCAGGTAGATGCACA  Raphanus raphanistrum subsp. landra
EV573834       --> GAAAACGAAAGCGGGCGGCATTCTGAATCAAAAACGCAGGTAGATGCACA  Raphanus raphanistrum subsp. landra
EY896263       --> GAAACCGAAAGCGAGGCGCATTCTGAATCAAAAACGCAGGTAGATGTACA  Raphanus raphanistrum subsp. maritimus
FD573840       --> GAAACCGAAAGCGAGGCGCATTCTGAATCAAAAACGCAGGTAGATGTACA  Raphanus sativus cv Early Scarlet Globe

               251    -    301
UN16461        --> GCAGATGCAGAAGGCGGGATCGGTCCGATTTTGCTAATCAAATCTCTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989598       <-- GCAGATGCAGAAGGCGGGATCGGTCCGATTTTGCTAATCAAATCTCTGAA  Raphanus raphanistrum subsp. landra
FD569680       <-- GCAGATGCAGAAGGCGGGATGGGTCCGATTTTGCTAATCAAATCTTTGAA  Raphanus sativus cv Early Scarlet Globe
FY448997       <-- ..................................................  Raphanus sativus cv GSK3-1
FY450137       <-- ..................................................  Raphanus sativus cv GSK3-1
FY448991       <-- ..................................................  Raphanus sativus cv GSK3-1
FD532282       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV569250       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD579668       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX750384       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD568518       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD532668       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD583610       --> GCAAATGCAGAAGGGGGGATCGGTCCGATTTTGCTAATCAAATCTCTGAA  Raphanus sativus cv Rat-Tail Radish #3870
FD976453       --> GCAGATGCAGAAGGCGGGATGGGTCCGATTTTGCTAATCAAATCTTTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX753854       --> GCAGATGCAGAAGGCGGGATCGGTCCGATTTTGCTAATCAAATCTCTGAA  Raphanus raphanistrum subsp. maritimus
FD985357       --> GCAGATGCAGAAGGCGGGATCGGTCCGATTTTGCTAATCAAATCTCTGAA  Raphanus raphanistrum subsp. landra
EV573834       --> GCAGATGCAGAAGGCGGGATCGGTCCGATTTTGCTAATCAAATCTCCGAA  Raphanus raphanistrum subsp. landra
EY896263       --> GCAGATGCAGAAGGCGGGATGGGTCCGATTTTGCTAATCAAATCTTTGAA  Raphanus raphanistrum subsp. maritimus
FD573840       --> GCAAATGCAGAAGGCGGGATGGGTCCGATTTTGCTAATCAAATCTTTGAA  Raphanus sativus cv Early Scarlet Globe

               301    -    351
UN16461        --> GCTGTATTCTTCAGGAAGCATGTCAAAGAGATCATATCCTTTACAAATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989598       <-- GCTGTATTCTTCAGGAAGCATGTCAAAGAGATCATACCCTTTACAAATAC  Raphanus raphanistrum subsp. landra
FD569680       <-- GCTGTATTCTTCAGGAAGCATGTCAAAGAGATCATATCCTTTACAAATAT  Raphanus sativus cv Early Scarlet Globe
FY448997       <-- ..................................................  Raphanus sativus cv GSK3-1
FY450137       <-- ..................................................  Raphanus sativus cv GSK3-1
FY448991       <-- ..................................................  Raphanus sativus cv GSK3-1
FD532282       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV569250       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD579668       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX750384       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD568518       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD532668       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD583610       --> GCCGTATTCTTCAGGAAGCATGTCAAAAAGATCATATCCTTTACAAATAT  Raphanus sativus cv Rat-Tail Radish #3870
FD976453       --> GCTGTATTCTTCAGGAAGCATGTCAAAGAGATCATATCCTTTACAAATAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX753854       --> GCTGTATTCTTCAGGAAGCATGTCAAAGAGATCATACCCTTTACAAATAC  Raphanus raphanistrum subsp. maritimus
FD985357       --> GCTGTATTCTTCAGGAAGCATGTCAAAGAGATCATACCCTTTACAAATAC  Raphanus raphanistrum subsp. landra
EV573834       --> GCTGTATTCTTCAGGAAGCATGTCAAAGAGATCATACCCTTTACAAATAC  Raphanus raphanistrum subsp. landra
EY896263       --> GCTGTATTCTTCAGGAAGCATGTCAAAGAGATCATATCCTTTACAAATAT  Raphanus raphanistrum subsp. maritimus
FD573840       --> GCTGTATTCTTCAGGAAGCATGTCAAAGAGATCATATCCTTTACAAATAT  Raphanus sativus cv Early Scarlet Globe

               351    -    401
UN16461        --> GTTTCTGTATCCTGGAGTAGTCAAGAAACTCCTTGCGCCTCACTCTATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989598       <-- GTTTCTGTATCCTGGAGTAGTCAAGAAACTCCTTGCGCCTCACTCTATCC
FD569680       <-- GTTTCTGTATCCTGGAGTAGTCAAGAAACTCCTTGCGCCTCACTCTATCC
FY448997       <-- ..................................................
FY450137       <-- ..................................................
FY448991       <-- ..................................................
FD532282       <-- ..................................................
EV569250       <-- ..................................................
FD579668       <-- ..................................................
EX750384       <-- ..................................................
FD568518       <-- ..................................................
FD532668       <-- ..................................................
FD583610       --> GTTTCTGTGTCCTGGAGTAGTCAAGAAACTCCTTGCGCCTCACTCTATCC
FD976453       --> GTTTCTGTATCCTGGAGTAGTCAAGAAACTCCTTGCGCTTCACTCTATCC
EX753854       --> GTTTCTGTATCCTGGAGTAGTCAAGAAACTCCTTGCGCCTCACTCTATCC
FD985357       --> GTTTCTGTATCCTGGAGTAGTCAAGAAACTCCTTGCGCCTCACTCTATCC
EV573834       --> GTTTCTGTATCCTGGAGTAGTCAAGAAACTCCTTGCGCCTCACTCTATCC
EY896263       --> GTTTCTGTATCCTGGAGTAGTCAAGAAACTCCTTGCGCTTCACTCTATCC
FD573840       --> GTTTCTGTATCCTGGAGTAGTCAAGAAACTCCTTGCGCCTCACTCTATCC

               401    -    451
UN16461        --> GCATGGCTATACCCTTTCATCTTGAACACAAACTCGCTGAGACGTCTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989598       <-- GCATGGCTATACCCTTTCATCTTGAACACAAACTCGCTGAGACGTCTGAA
FD569680       <-- GCATGGCTATACCCTTTCATCTTGAACACAAACTC...............
FY448997       <-- ...............................................aAA
FY450137       <-- ..................................................
FY448991       <-- ..................................................
FD532282       <-- ..................................................
EV569250       <-- ..................................................
FD579668       <-- ..................................................
EX750384       <-- ..................................................
FD568518       <-- ..................................................
FD532668       <-- ..................................................
FD583610       --> GCATGGCTATACCCTTTCATCTTGAACACAAACTCGCc............
FD976453       --> GCATGGCTATACCCTTTCATCTTGAACACAAACTCGCTTAGACGTCTGAA
EX753854       --> GCATGGCTATACCCTTTCATCTTGAACACAAACTCGCTGAGACGTCTGAA
FD985357       --> GCATGGCTATACCCTTTCATCTTGAACACAAACTCGCTGAAACGTCTGAA
EV573834       --> GCATGGCTATACCCTTTCATCTTGAACACAAACTCGCTGAAACGTCTGAA
EY896263       --> GCATGGCTATACCCTTTCATCTTGAACACAAACTCGCTTAGACGTCTGAA
FD573840       --> GCATGGCTATACCCTTTCATCTTGAACACAAACTC...............

               451    -    501
UN16461        --> ACAGAAGCTACAATGCCACCCGGCGTCAGACAGTATCAAGTCGGTCTGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989598       <-- ACAGAAGCTACAATGCCACCCGGCGTCAGACAGTATCAAGTCGGTCTGCC  Raphanus raphanistrum subsp. landra
FD569680       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FY448997       <-- ACAGAAACTACAATGCCACCCGGCGTTAGACAGTATCAAGTCGGTCTGCC  Raphanus sativus cv GSK3-1
FY450137       <-- .....................GGCGTTAGACAGTATCAAGTCGGTCTGCC  Raphanus sativus cv GSK3-1
FY448991       <-- ..................................................  Raphanus sativus cv GSK3-1
FD532282       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV569250       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD579668       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX750384       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD568518       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD532668       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD583610       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD976453       --> ACAGAAGCTACAATGCCACCCAGCGTCAGACAGTATCAAGTCGGTTTGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX753854       --> ACAGAAGCTACAATGCCACCCGGCGTCAGACAGTATCAAGTCGGTTTGCC  Raphanus raphanistrum subsp. maritimus
FD985357       --> ACAGAAGCTACAATGCCACCCGGCGTCAGACAGTATCAAGTCGGTCTGCC  Raphanus raphanistrum subsp. landra
EV573834       --> ACAGAAGCTACAATGCCACCCGGCGTCAGACAGTATCAAGTCGGTCTGCC  Raphanus raphanistrum subsp. landra
EY896263       --> ACAGAAGCTACAATGCCACCCAGCGTCAGACAGTATCAAGTCGGTTTGCC  Raphanus raphanistrum subsp. maritimus
FD573840       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               501    -    551
UN16461        --> GGGAGTGGCGGTAGTGAGTCCATTTCCTGCTGTATAAATGCACGGACGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989598       <-- GGGAGTGGCGGTAGTGAGTCCATTTCCTGCTGTATAAATGCACGGACGCT
FD569680       <-- ..................................................
FY448997       <-- GGGAGTGGCGGTAGTGAGTCCATTTCCTGCTGTATAAATGCACGGACGCT
FY450137       <-- GGGAGTGGCGGTAGTGAGTCCATTTCCTGCTGTATAAATGCACGGACGCT
FY448991       <-- ....GTGGCGGTAGTGAGTCCATTTCCTGCTGTATAAATGCACGGACGCT
FD532282       <-- .............................CTGTATAAATGCACGGACGCT
EV569250       <-- ..............................TGTATAAATGCACGGACGCT
FD579668       <-- ..................................................
EX750384       <-- ..................................................
FD568518       <-- ..................................................
FD532668       <-- ..................................................
FD583610       --> ..................................................
FD976453       --> GGGAGTGGCGGTAGTGAGTCCATTTCCTGCTGTATAAATGCACGGACGCT
EX753854       --> GCGAGTGGCGGTAGTGAGTCCATTTCCTGCTGTATAAATGCACGGACGCT
FD985357       --> GGGAGTGGCGGTAGTGAGTCCATTTCCTGCTGTATAAATGCACGGACGCT
EV573834       --> GGGAGTGGCGGTAGTGAGTCCATTTCCTGCTGTATAAATGCACGGACGCT
EY896263       --> GGGAGTGGCGGTAGTGAGTCCATTTCCTGCTGTATAAATGCACGGACGCT
FD573840       --> ..................................................

               551    -    601
UN16461        --> CTCCAGCTGCTGTAATCAACAGGGAACTCGAAGGAGTACATGTAATCCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989598       <-- CTCCAGCTGCTGTAATCAACAGGGAACTCGAAGGAGTACATGTAATCCCT  Raphanus raphanistrum subsp. landra
FD569680       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FY448997       <-- CTCCAGCTGCTGTAATCAACAGGGAACTCGAAGGAGTACATGTAATCCCT  Raphanus sativus cv GSK3-1
FY450137       <-- CTCCAGCTGCTGTAATCAACAGGGAACTCGAAGGAGTACATGTAATCCCT  Raphanus sativus cv GSK3-1
FY448991       <-- CTCCAGCTGCTGTAATCAACAGGGAACTCGAAGGAGTACATGTAATCCCT  Raphanus sativus cv GSK3-1
FD532282       <-- CTCCAGCTGCTGTAATCAACAGGGAACTCGAAGGAGTACATGTA-TCTCT  Raphanus raphanistrum subsp. maritimus
EV569250       <-- CTCCAGCTGCTGTAATCAACAGGGAACTCGAAGGAGTACATGTAATCCCT  Raphanus raphanistrum subsp. landra
FD579668       <-- ..............ATCAACAGGGA-CTCGAAGGAGTACATGTA-TCCCT  Raphanus sativus cv Rat-Tail Radish #3870
EX750384       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD568518       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD532668       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD583610       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD976453       --> CTCCAGCTGCTGTAATCAACAGGGAACTCGAAGGAGTACATGTAATCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX753854       --> CTCCAGCTGCTGTAATCAACAGGGAACTCGAAGGAGTACATGTAATCTCT  Raphanus raphanistrum subsp. maritimus
FD985357       --> CTCCAGCTGCTGTAATCAACAGGGAACTCGAAGGAGTACATGTAATCCCT  Raphanus raphanistrum subsp. landra
EV573834       --> CTCCAGCTGCTGTAATCAACAGGGAACTCGAAGGAGTACATGTAATCCCT  Raphanus raphanistrum subsp. landra
EY896263       --> CTCCAGCTGCTGTAATCAACAGGGAACTCGGAGGAGTACATGTAATCTCT  Raphanus raphanistrum subsp. maritimus
FD573840       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               601    -    651
UN16461        --> CATCTCAAGATGCATCACGTCCGGTATCCCGTCGCACCACTGTAGGAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989598       <-- CATCTCAAGATGCATCACGTCCGGTATCCCGTCGCACCACTGTAGGAGCT  Raphanus raphanistrum subsp. landra
FD569680       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FY448997       <-- CATCTCAAGATGCATCACGTCCGGTATCCCGTCGCACCACTGTAGGAGCT  Raphanus sativus cv GSK3-1
FY450137       <-- CATCTCAAGATGCATCACGTCCGGTATCCCGTCGCACCACTGTAGGAGCT  Raphanus sativus cv GSK3-1
FY448991       <-- CATCTCAAGATGCATCACGTCCGGTATCCCGTCGCACCACTGTAGTAGCT  Raphanus sativus cv GSK3-1
FD532282       <-- CATCTCCAGATGCATCACGTCGGGTATCCCGTCGCACCACTGTAGGAGTT  Raphanus raphanistrum subsp. maritimus
EV569250       <-- CATCTCAAGATGCATCACGTCCGGTATCCCGTCGCACCACTGTAGGAGCT  Raphanus raphanistrum subsp. landra
FD579668       <-- CATCTCAAGATGCATCACGTCCGGTATCCCGTCGCACCACTGTAGGAGCT  Raphanus sativus cv Rat-Tail Radish #3870
EX750384       <-- .ATCTCCAGATGCATCACGTCGGGTATCCCGTCGCACCACTGTAGGAGCT  Raphanus raphanistrum subsp. maritimus
FD568518       <-- ......................................ACTGTAGGAGCT  Raphanus sativus cv Early Scarlet Globe
FD532668       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD583610       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD976453       --> CATCTCCAGATGCATCACGTCGGGTATCCCGTCGCACCACTGTAGGAGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX753854       --> CATCTCCAGATGCATCACGTCGGGTATCCCGTCGCACCACTGTAGGAGCT  Raphanus raphanistrum subsp. maritimus
FD985357       --> CATCTCAAGATGCATCACGTCCGGTATCCCGTCGCACCACTGTAGGAGCT  Raphanus raphanistrum subsp. landra
EV573834       --> CATCTCAAGATGCATCACGTCCGGTATCCCGTCGCACCACTGTAGGAGCT  Raphanus raphanistrum subsp. landra
EY896263       --> CATCTCCAGATGCATCACGTCGGGTATCCCGTCGCACCACTGTAGGAGCT  Raphanus raphanistrum subsp. maritimus
FD573840       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               651    -    701
UN16461        --> TGACGGTATGAGGACTGGGAATCTCATCCGCATCAGACATTATCACCGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989598       <-- TGACGGTATGAGGACTGGGAATCTCATCCGCATCAGACATTATCACCGCG  Raphanus raphanistrum subsp. landra
FD569680       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FY448997       <-- TGACGGTATGAGGACTGGGAATCTCATCCGCATCAGACATTATCACCGCG  Raphanus sativus cv GSK3-1
FY450137       <-- TGACGGTATGAGGACTGGGAATCTCATCCGCATCAGACATTATCACCGCG  Raphanus sativus cv GSK3-1
FY448991       <-- TGACGGTATGAGGACTGGGAATCTCATCCGCATCAGACATTATCACCGCG  Raphanus sativus cv GSK3-1
FD532282       <-- TGACGGTATGAGGACTGGGGATCTCATCCGCATCGGACATTATCACCGCG  Raphanus raphanistrum subsp. maritimus
EV569250       <-- TGACGGTATGAGGACTGGGAATCTCATCCGCATCAGACATTATCACCGCG  Raphanus raphanistrum subsp. landra
FD579668       <-- -GACGGTATGAGGACTGGGAATCTCATCCGCATCAGACATTATCACCGCG  Raphanus sativus cv Rat-Tail Radish #3870
EX750384       <-- TGACGGTATGAGGACTGGGAATCTCATCCGCATCGGACATTATCACCGCG  Raphanus raphanistrum subsp. maritimus
FD568518       <-- -GACGGTATGAGGACTGGGAATCTCATC-GCATCAGACATTATCACCGCG  Raphanus sativus cv Early Scarlet Globe
FD532668       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD583610       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD976453       --> TGACGGTATGAGGACTGGGAATCTCATCCGCATCGGACATTATCACCGCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX753854       --> TGACGGTATGAGGACTGGGAATCTCATCCGCATCGGACATTATCACCGCG  Raphanus raphanistrum subsp. maritimus
FD985357       --> TGACGGTATGAGGACTGGGAATCTCATCCGCATCAGACATTATCACCGCG  Raphanus raphanistrum subsp. landra
EV573834       --> TGACGGTATGAGGACTGGGAATCTCATCCGCATCAGACATTATCACCGCG  Raphanus raphanistrum subsp. landra
EY896263       --> TGACGGTATGAGGACTGGGAATCTCATCCGCATCGGACATTATCACCGCG  Raphanus raphanistrum subsp. maritimus
FD573840       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               701    -    751
UN16461        --> TCTCCATCAGAGACATCAGCTTCTCTGAGGAGCCAGTTCATAGCAACCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989598       <-- TCTCCATCAGAGACATCAGCTTCTCTGAGGAGCCAGTTCATAGCAACCCG  Raphanus raphanistrum subsp. landra
FD569680       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FY448997       <-- TCTCCATCAGAGACATCAGCTTCTCTGAGGAGCCAGTTCATAGCAACCCG  Raphanus sativus cv GSK3-1
FY450137       <-- TCTCCATCAGAGACATCAGCTTCTCTGAGGAGCCAGTTCATAGCAACCCG  Raphanus sativus cv GSK3-1
FY448991       <-- TCTCCATCAGAGACATCAGCTTCTCTGAGGAGCCAGTTCATAGCAACCCG  Raphanus sativus cv GSK3-1
FD532282       <-- TCTCCATCAGAGACGTTAGCTTCTCTGAGGAGCCAGTTCATAGCAACCCG  Raphanus raphanistrum subsp. maritimus
EV569250       <-- TCTCCATCAGAGGCATCAGCTTCTCTGAGGAGCCAGTTCATAGCAACCCG  Raphanus raphanistrum subsp. landra
FD579668       <-- TCTCCATCAGAGACATCAGCTTCTCTGAGGAGCCAGTTCATAGCAACCCG  Raphanus sativus cv Rat-Tail Radish #3870
EX750384       <-- TCTCCATCAGAGACGTTAGCTTCTCTGAGGAGCCAGTTCATAGCAACCCG  Raphanus raphanistrum subsp. maritimus
FD568518       <-- TCTCCATCAGAGACGTTAGCTTCTCTGAGGAGCCAGTTCATAGCAACCCG  Raphanus sativus cv Early Scarlet Globe
FD532668       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD583610       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD976453       --> TCTCCATCAGAGACGTTAGCTTCTCTGAGGAGCCAGTTCATAGCAACCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX753854       --> TCTCCATCAGAGACGTTAGCTTCTC.........................  Raphanus raphanistrum subsp. maritimus
FD985357       --> TCTCCATCAGAGACATCAGCTTCTCTGAAGAGCCAGTTCATAGCAACCCG  Raphanus raphanistrum subsp. landra
EV573834       --> TCTCCATCAGAGGCATCAGCTTCTCTGAGGAGCCAGTTCATAGCAACCCG  Raphanus raphanistrum subsp. landra
EY896263       --> TCTCCATCAGAGACGTTAGCTTCTCTGAGGAGCCAGTTCATA........  Raphanus raphanistrum subsp. maritimus
FD573840       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               751    -    801
UN16461        --> TTGCCGGCCTTCGAGCAAGAATGGATCTTCTTCTTGTAAACTACTACGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989598       <-- TTGCCGGCCTTCGAGCAAGAATGGATCTTCc...................
FD569680       <-- ..................................................
FY448997       <-- TTGCCGGCCTTCGAGCAAGAATGGATCTTCTTCTTGTAAACTACTACGCT
FY450137       <-- TTGCCGGCCTTCGAGCAAGAATGGATCTTCTTCTTGTAAACTACTACGCT
FY448991       <-- TTGCCGGCCTTCGAGCAAGAATGGATCTTCTTCTTGTAAACTACTACGCT
FD532282       <-- TTGCCGGCCTTCGAGCAAGAATGGATCTTCTTCTTGTAAACTACTACGCT
EV569250       <-- TTGCCGGCCTTCGAGCAAGAATGGATCTTCTTCTTGTAAACTACTACGCT
FD579668       <-- TTGCCGGCCTTCGAGCAAGAATGGATCTTCTTCTTGTAAACTACCACGTT
EX750384       <-- TTGCCGGCCTTCGAGCAAGAATGGATCTTCTTCTTGTAAACTACTACGCT
FD568518       <-- TTGCCGGC-TTCGAGCAAGAATGGATCTTCTTCTTGTAAACTACTACGCT
FD532668       <-- ..................................................
FD583610       --> ..................................................
FD976453       --> TT................................................
EX753854       --> ..................................................
FD985357       --> T.................................................
EV573834       --> TTGCCGGCCTTCGAGCAAGAATGGATCTTCTTCTTGTAAACTACTACGCT
EY896263       --> ..................................................
FD573840       --> ..................................................

               801    -    851
UN16461        --> TCTGCCCGGGGAACACCCCGTGGACTATCTTACCCTCCGCGAAGGCGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989598       <-- ..................................................
FD569680       <-- ..................................................
FY448997       <-- TCTGCCCGGGGAACACCCCGTGGACTATCTTACCCTCCGCGAAGGCGAAT
FY450137       <-- TCTGCCCGGGGAACACCCCGTGGACTATCTTACCCTCCGCGAAGGCGAAT
FY448991       <-- TCTGCCCGGGGAACACCCCGTGGACTATCTTACCCTCCGCGAAGGCGAAT
FD532282       <-- TCTGACCAGGGAACACCCCGTGGACTATCTTACCCTCCGCGAAGGCGAAT
EV569250       <-- TCTGCCCGGGGAACACCCCGTGGACTATCTTACCCTCCGCGAAGGCGAAT
FD579668       <-- TCTGACCAGGGAACACCCCGTGGACTATCTTACCCTCCGCGAAGGCGAAT
EX750384       <-- TCTGACCAGGGAACACCCCGTGGACTATCTTACCCTCCGCGAAGGCGAAT
FD568518       <-- TCTTCCCGGGGAACACCCCGTGGACTATCTTTTCCTCCGCGAAGGCGAAT
FD532668       <-- .............CACCCCGTGGACTATCTTACCCTCCGCGAAGGCGAAT
FD583610       --> ..................................................
FD976453       --> ..................................................
EX753854       --> ..................................................
FD985357       --> ..................................................
EV573834       --> TCTGCCCGGGGAACACCCCGTGGACTA.......................
EY896263       --> ..................................................
FD573840       --> ..................................................

               851    -    901
UN16461        --> CTCGCCTTCGCGGAGTCGAAAAAGAGAGGCTTGGGGATGCCAGTGAAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989598       <-- ..................................................
FD569680       <-- ..................................................
FY448997       <-- CTCGCCTTCGCGGAGTCGAAAAAGAGAGGCTTGGGGATGCCAGTGAAGGT
FY450137       <-- CTCGCCTTCGCGGAGTCGAAAAAGAGAGGCTTGGGGATGCCAGTGAAGGT
FY448991       <-- CTCGCCTTCGCGGAGTCGAAAAAGAGAGGCTTGGGGATGCCAGTGAAGGT
FD532282       <-- CTCGCCTTCTCGGAGTCGAAAAAGAGAGGCTTGGGGATGCCAGTGAAGGT
EV569250       <-- CTCGCCTTCGCGGAGTCGAAAAAGAGAGGCTTGGGGATGCCAGTGAAGGT
FD579668       <-- CTTGCCTTCGCGGAGTCGAAGAAGAGAGGCTTGGGGATGCCTGTGAAGGT
EX750384       <-- CTCGCCTTCTCGGAGTCGAAAAAGAGAGGCTTGGGGATGCCAGTGAAGGT
FD568518       <-- CTCGCCTTCGCGGAGGCGAAGAAGAGAGGCTTGGAGATGCCTGTGAAGGT
FD532668       <-- CTCGCCTTCTCGGAGTCGAAAAAGAGAGGCTTAGGGATGCCAGTGAAGGT
FD583610       --> ..................................................
FD976453       --> ..................................................
EX753854       --> ..................................................
FD985357       --> ..................................................
EV573834       --> ..................................................
EY896263       --> ..................................................
FD573840       --> ..................................................

               901    -    951
UN16461        --> GGTGTTGGATTCAAGAATGACGAATTTTGAAACGTAGGGTCCAAGCTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989598       <-- ..................................................
FD569680       <-- ..................................................
FY448997       <-- GGTGTTGGATTCAAGAATGACGAATTTTGAAACGTAGGGTCCAAGCTCCT
FY450137       <-- GGTGTTGGATTCAAGAATGACGAATTTTGAAACGTAGGGTCCAAGCTCCT
FY448991       <-- GGTGTTGGATTCAAGAATGACGAATTTTGAAACGTAGGGTCCAAGCTCCT
FD532282       <-- GGTGTTGGATTCAAGAATGACGAATTTTGAAACGTAGGGTCCAAGCTCCT
EV569250       <-- GGTGTTGGATTCAAGAATGACGAATTTTGAAACGTAGGGTCCAAGCTCCT
FD579668       <-- GGTGTTGGATTCAAGAATGACGAACTTGGAGACGTAAGGTCCAAGCTCCT
EX750384       <-- GGTGTTGGATTCAAGAATGACGAATTTTGAAACGTAGGGTCCAAGCTCCT
FD568518       <-- GGTGTTGGATTCAAGAATGACGAACTTGGAGACGTAGGGTCTTAGCTCCT
FD532668       <-- GGTGTTGGATTCAAGAATGACGAATTTTGAAACGTAGGGTCCAAGCTCCT
FD583610       --> ..................................................
FD976453       --> ..................................................
EX753854       --> ..................................................
FD985357       --> ..................................................
EV573834       --> ..................................................
EY896263       --> ..................................................
FD573840       --> ..................................................

               951    -   1001
UN16461        --> GCCATCTCACCTCTAGGAGGTCGAGCTCGTTGCTGAAGATGATGGCGTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989598       <-- ..................................................
FD569680       <-- ..................................................
FY448997       <-- GCCATCTCACCTCTAGGAGGTCGAGCTCGTTGCTGAAGATGATGGCGTCG
FY450137       <-- GCCATCTCACCTCTAGGAGGTCGAGCTCGTTGCTGAAGATGATGGCGTCG
FY448991       <-- GCCATCTCACCTCTAGGAGGTCGAGCTCGTTGCTGAAGATGATGGCGTCG
FD532282       <-- GCCATCTCACCTCTAGGAGGTCGAGCTCGTTGCTGAAGATGATGGCGTCG
EV569250       <-- GCCATCTCGCCTCTAGGAGGTCGAGCTCGTTGCTGAAGATGATGGCGTCG
FD579668       <-- GCCATCTCACCTCTAGGAGGTCGAGCTCGTTGCTGAAGATGATAGCGTCG
EX750384       <-- GCCATCTCACCTCTAGGAGGTCGAGCTCGTTGCTGAAGATGATGGCGTCG
FD568518       <-- GCCATCTGACCTCTAGGAGGTCGAGCTCGTTGCTGAAGATGATGGCGTCG
FD532668       <-- GCCATCTCACCTCTAGGAGGTCGAGCTCGTTGCTGAAGATGATGGCGTCG
FD583610       --> ..................................................
FD976453       --> ..................................................
EX753854       --> ..................................................
FD985357       --> ..................................................
EV573834       --> ..................................................
EY896263       --> ..................................................
FD573840       --> ..................................................

               1001   -   1051
UN16461        --> AAGACTCGCCTTGGAGAAGTACGGGGAGTCCATCCGTGGAGGTGGCAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989598       <-- ..................................................
FD569680       <-- ..................................................
FY448997       <-- AAGACTCGCCTTGGAGAAGTACGGGGAGTCCATCCGTGGAGGTGGCAGAG
FY450137       <-- AAGACTCGCCTTGGAGAAGTACGGGGAGTCCATCCGTGGAGGTGGCAGAG
FY448991       <-- AAGACTCGCCTTGGAGAAGTACGGGGAGTCCATCCGTGGAGGTGGCAGAG
FD532282       <-- AAGACTCGCCTTGGAGAAGTACGGGGAGTCAATCCGTGGAGGTGGCAGAG
EV569250       <-- AAGACTCGCCTTGGAGAAGTACGGGGAGTCCATCCGTGGAGGTGGCAGAG
FD579668       <-- AAGACTCGCCTTGGAGAAGTACGGGGAGTCCATCCGTGGAGGTGGCAGAG
EX750384       <-- AAGACTCGCCTTGGAGAAGTACGGGGAGTCCATCCGTGGAGGTGGCAGAG
FD568518       <-- AAGACTCGCCTTGGAGAAGTACGGGGAGTCCATCCGTGGAGGTGGCAGAG
FD532668       <-- AAGACTCGCCTTGGAGAAGTACGGGGAGTCCATCCGTGGAGGTGGCAGAG
FD583610       --> ..................................................
FD976453       --> ..................................................
EX753854       --> ..................................................
FD985357       --> ..................................................
EV573834       --> ..................................................
EY896263       --> ..................................................
FD573840       --> ..................................................

               1051   -   1101
UN16461        --> GTGTGACATGGAGACGTTCTCGGCGTAGTAATGCGGGATTCGTCTGAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989598       <-- ..................................................
FD569680       <-- ..................................................
FY448997       <-- GTGTGACATGGAGACGTTCTCGGCGTAGTAATGCGGGATTCGTCTGAATG
FY450137       <-- GTGTGACATGGAGACGTTCTCGGCGTAGTAATGCGGGATTCGTCTGAATG
FY448991       <-- GTGTGACATGGAGACGTTCTCGGCGTAGTAATGCGGGATTCGTCTGAATG
FD532282       <-- GTGTGACATGGAGACGTTCTCGGCGTAGTAATGCGGGATTCGTCTGAATG
EV569250       <-- GTGTGACATGGAGACGTTCTCGGCGTAGTAATGCGGGATTCGTCTGAATG
FD579668       <-- GTGTGACATGGAGACGTTCTCGGCGTAGTAATGCGGGATTCGTCTGAATG
EX750384       <-- GTGTGACATGGAGACGTTCTCGGCGTAGTAATGCGGGATTCGTCTGAATG
FD568518       <-- GTGTGACATGGAGACGTTCTCGGCGTAGTAATGCGGGATTCGTCTGAATG
FD532668       <-- GTGTGACATGGAGACGTTCTCGGCGTAGTAATGCGGGATTCGTCTGAATG
FD583610       --> ..................................................
FD976453       --> ..................................................
EX753854       --> ..................................................
FD985357       --> ..................................................
EV573834       --> ..................................................
EY896263       --> ..................................................
FD573840       --> ..................................................

               1101   -   1151
UN16461        --> GTGGTGGTGGTTTGTCCCAGAGAGGACGGAAGAGATATGATAAGGTTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989598       <-- ..................................................
FD569680       <-- ..................................................
FY448997       <-- GTGGTGGTGGTTTGTCCCAGAGAGGACGGAAGAGATATGATAAGGTTTGA
FY450137       <-- GTGGTGGTGGTTTGTCCCAGAGAGGACGGAAGAGATATGATAAGGTTTGA
FY448991       <-- GTGGTGGTGGTTTGTCCCAGAGAGGACGGAAGAGATATGATAAGGTTTGA
FD532282       <-- GTGGTGGTGGTTTGTCCCAGAGAGGACGGAAGAGATATGATAAGGTTTGA
EV569250       <-- GTGGTGGTGGTTTGTCCCAGAGAGGACGGAAGAGATATGATAAGGTTTGA
FD579668       <-- GTGGTGGTGGTTTGTCCCAGAGAGGACGGAAGAGATATGATAAGGTTTGA
EX750384       <-- GTGGTGGTGGTTTGTCCCAGAGAGGACGGAAGAGATATGATAAGGTTTGA
FD568518       <-- GCGGTGGTGGTTTGTCCCAGAGAGGACGGAAGAGATATGATAAGGTTTGA
FD532668       <-- GTGGTGGTGGTTTGTCCCAGAGAGGACGGAAGAGATATGATAAGGTTTGA
FD583610       --> ..................................................
FD976453       --> ..................................................
EX753854       --> ..................................................
FD985357       --> ..................................................
EV573834       --> ..................................................
EY896263       --> ..................................................
FD573840       --> ..................................................

               1151   -   1201
UN16461        --> AGGTTTGTGAGGATGCCAAACAAACATGTTGAGGAAAGGATAAGAAGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989598       <-- ..................................................
FD569680       <-- ..................................................
FY448997       <-- AGGTTTGTGAGGATGCCAAACAAACATGTTGAGGAAAGGATAAGAAGAGC
FY450137       <-- AGGTTTGTGAGGATGCCAAACAAACATGTTGAGGAAAGGATAAGAAGAGC
FY448991       <-- AGGTTTGTGAGGATGCCAAACAAACATGTTGAGGAAAGGATAAGAAGAGC
FD532282       <-- AGGTTTGTGAGGATGCCAAACAAACATGTTGAGGAAAGGATAAGAAGAGC
EV569250       <-- AGGTTTGTGAGGATGCCAAACAAACATGTTGAGGAAAGGATAAGAAGAGC
FD579668       <-- AGGTTTGTGAGGATGCCAAACAAACATGTTGAGGAAAGGATAAGAAGAGC
EX750384       <-- AGGTTTGTGAGGATGCCAAACAAACATGTTGAGGAAAGGATAAGAAGAGC
FD568518       <-- AGGTTTGTGAGGATGCCAAACAAACATGTTGAGGAAAGGATAAGAAGAGC
FD532668       <-- AGGTTTGTGAGGATGCCAAACAAACATGTTGAGGAAAGGATAAGAAGAGC
FD583610       --> ..................................................
FD976453       --> ..................................................
EX753854       --> ..................................................
FD985357       --> ..................................................
EV573834       --> ..................................................
EY896263       --> ..................................................
FD573840       --> ..................................................

               1201   -   1251
UN16461        --> TGGCAATAGAACAAGTTTAGGTGGCGATTTGGGCAACGCTCTCTTACTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989598       <-- ..................................................
FD569680       <-- ..................................................
FY448997       <-- TGGCAATAGAACAAGTTTAGGTGGCGATTTGGGCAACGCTCTCTTACTCA
FY450137       <-- TGGCAATAGAACAAGTTTAGGTGGCGATTTGGGCAACGCTCTCTTACTCA
FY448991       <-- TGGCAATAGAACAAGTTTAGGTGGCGATTTGGGCAACGCTCTCTTACTCA
FD532282       <-- TGGCAATAGAACAAGTTTAGGTGGCGATTTGGGCAACGCTCTCTTACTCA
EV569250       <-- TGGCAATAGAACAAGTTTAGGTGGCGATTTGGGCAACGCTCTCTTACTCA
FD579668       <-- TGGCAATAGAACAAGTTTAGGTGGCGATTTGGGCAACGCTCTCTTACTCA
EX750384       <-- TGGCAATAGAACAAGTTTAGGTGGCGATTTGGGCAACGCTCTCTTACTCA
FD568518       <-- TGGCAATAGAACAAGTTTAGGTGGCGATTTGGGCAACGCTCTCTTACTCA
FD532668       <-- TGGCAATAGAACAAGTTTAGGTGGCGATTTGGGCAACGCTCTCTTACTCA
FD583610       --> ..................................................
FD976453       --> ..................................................
EX753854       --> ..................................................
FD985357       --> ..................................................
EV573834       --> ..................................................
EY896263       --> ..................................................
FD573840       --> ..................................................

               1251   -   1301
UN16461        --> TTTCATTCCCTTATTCCAGATTTATCGAGGTTTCAGATTTTCCTTAGCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989598       <-- ..................................................
FD569680       <-- ..................................................
FY448997       <-- TTTCATTCCCTTATTCCAGAT.............................
FY450137       <-- TTTCATTCCCTTATTCCAGATTTATCGAGGTTTCAGATTTTCGTTAGCTA
FY448991       <-- TTTCATTCCCTTATTCCAGATTTATCGAGGTTTCAGATTTTCGTTAGCTA
FD532282       <-- TTTCATTCCCTTATTCCAGATTTATCGAGGTTTCAGATTTTCCTTAGCTA
EV569250       <-- TTTCATTCCCTTATTCCAGATTTATCGAGGTTTCAGATTTTCCTTAGCTA
FD579668       <-- TTTCATTCCCTTATTCCAGATTTATCGAGGTTTCAGATTTTCCTTAGCTA
EX750384       <-- TTTCATTCCCTTATTCCAGATTTATCGAGGTTTCAGATTTTCCTTAGCTA
FD568518       <-- TTTCATTCCCTTATTCCAGATTTATCGAGGTTTCAGATTTTCCTTAGCTA
FD532668       <-- TTTCATTCCCTTATTCCAGATTTATCGAGGTTTCAGATTTTCCTTAGCTA
FD583610       --> ..................................................
FD976453       --> ..................................................
EX753854       --> ..................................................
FD985357       --> ..................................................
EV573834       --> ..................................................
EY896263       --> ..................................................
FD573840       --> ..................................................

               1301   -   1351
UN16461        --> CGAGATTGGAGTAATTTAGAAGAGGAGAGATGAGAACCACAAGAAGCGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989598       <-- ..................................................
FD569680       <-- ..................................................
FY448997       <-- ..................................................
FY450137       <-- CGAGATTGGAGTAATTTAGAAGAGGAGAGAT...................
FY448991       <-- CGAGATTGGAGTAA....................................
FD532282       <-- CGAGATTGGAGTcc....................................
EV569250       <-- CGAGATTGGAGTAATTTAGAAGAGGAGAGATcc.................
FD579668       <-- CGAGATTGGAGTAATTTAGAAGAGGAGAGATGAGAACCACAAGAAGCGGT
EX750384       <-- CGAGATTGGAGTAATTTAGAAGAGGAGAGATcc.................
FD568518       <-- CGAGATTGGAGTAATTTAGAAGAGGAGAGATGAGAACCACAAGAAGCGGT
FD532668       <-- CGAGATTGGAGTAATTTAGAAGAGGAGAGATcc.................
FD583610       --> ..................................................
FD976453       --> ..................................................
EX753854       --> ..................................................
FD985357       --> ..................................................
EV573834       --> ..................................................
EY896263       --> ..................................................
FD573840       --> ..................................................

               1351   -   1401
UN16461        --> GATCCTTTTATCTCAATGGATATTTGGCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989598       <-- ..............................
FD569680       <-- ..............................
FY448997       <-- ..............................
FY450137       <-- ..............................
FY448991       <-- ..............................
FD532282       <-- ..............................
EV569250       <-- ..............................
FD579668       <-- GATCCTTTTATCTCAATGGATATTTGGCCC
EX750384       <-- ..............................
FD568518       <-- cc............................
FD532668       <-- ..............................
FD583610       --> ..............................
FD976453       --> ..............................
EX753854       --> ..............................
FD985357       --> ..............................
EV573834       --> ..............................
EY896263       --> ..............................
FD573840       --> ..............................