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Alignment for radish unigene UN16493

               1      -     51
UN16493        --> GGGGGCCTCACGAACCATTCTCAGACACTCAAAGACTTCAAATAAGACCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545939       <-- ..................................................
FD968974       <-- ..................................................
FD968851       <-- ..................................................
EY901771       <-- ..................................................
FD538883       <-- ..................................................
FD975470       <-- ..................................................
EV540019       <-- ..................................................
EV540394       <-- ..................................................
FD536937       <-- ..................................................
EX755920       --> GGGGGCCTCACGAACCATTCTCAGACACTCAAAGACTTCAAATAAGACCT
FD540426       --> ....aggggacaAACCATTCACAGACACTCAAAGACTTCAAATAAGACCT
EV550694       --> ....................ggAGACACTCAAAGACTTCAAATAGGACCT
FD973096       --> ....................ggAGACACTCAAAGACTTCAAATAAGACCT
FD973247       --> ....................ggAGACACTCAAAGACTTCAAATAAGACCT
FD974106       --> ........................ggACTCAAAGACTTCAAATAAGACCT
EW732919       --> .............ggcttacgaaccattcacagatacTCACATAAGACCT
EX903721       --> .................................ggacTCACATAAGACCT
FD979435       --> ...........................ggacagacacTCACATAAGACCT
FD982070       --> ............................gacagatacTCACATAAGACCT
FY437635       --> .................................................T
FY439357       --> .................................................T
FY436942       --> ..................................................
FD542945       --> ..................................................
EY905306       --> ..................................................
EV548512       --> ..................................................
FY434541       --> ..................................................
EV534875       --> ..................................................
EV535810       --> ..................................................
EW732906       --> ..................................................
EV535299       --> ..................................................

               51     -    101
UN16493        --> TCTCTTCAGTTT--GCTCAGAGAGTGAACCAATAAGCATGGCGAAGATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545939       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD968974       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968851       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901771       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538883       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD975470       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540019       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540394       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536937       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755920       --> TTGCTTCAGTTT--ACTCAGAGAGTGAACCAATAAGCATGGCGAAGATGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540426       --> TTGCTTCAGTTTTTGCTCAGAGAGTGAACCAATAAGCATGGCGAAGATGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV550694       --> TCTCTTCAGTTTTTGCTCAGAGAGTGAACCAATAAGCATGGCGAAGATGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD973096       --> TTGCTTCAGTTTTTGCTCAGAGAGTGAACCAATAAGCATGGCGAAGATGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973247       --> TTGCTTCAGTTTTTGCTCAGAGAGTGAACCAATAAGCATGGCGAAGATGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974106       --> TTGCTTCAGTTT--ACTCAGAGAGTGAACCAATAAGCATGGCGAAGATGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW732919       --> TCTCTTCAGTTT--GCTCAGAGAGTGAACCAACAAGCATGGCGAAGATGA  Raphanus sativus cv Rat-Tail Radish #3870
EX903721       --> TCTCTTCAGTTT--GCTCAGAGAGTGAACCAACAAGCATGGCGAAGATGA  Raphanus sativus cv Rat-Tail Radish #3870
FD979435       --> TCTCTTCAGTTT--GCTCAGAGAGTGAACCAAAAAGCATGGCGAAGATGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982070       --> TCTCTTCAGTTT--GCTCAGAGAGTGAACCAACAAGCATGGCGAAGATGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY437635       --> TCTCTTC-GTTT--GCTCAGAGAGTGAACCAACAAGCATGGCGAAGATGA  Raphanus sativus cv GSK3-1
FY439357       --> TCTCTTC-GTTT--GCTCAGAGAGTGAACCAACAAGCATGGCGAAGATGA  Raphanus sativus cv GSK3-1
FY436942       --> .........TTT--GCTCAGAGAGTGAACCAACAAGCATGGCGAAGATGA  Raphanus sativus cv GSK3-1
FD542945       --> ..................gGAGAGTGAACCAATAAGCATGGCGAAGATGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905306       --> ........................gGAACCAATAAGCATGGCGAAGATGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548512       --> ...............................ggAAGCATGGCGAAGATGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY434541       --> ...................................GCATGGCGAAGATGA  Raphanus sativus cv GSK3-1
EV534875       --> ............................................AGATGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535810       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW732906       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV535299       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               101    -    151
UN16493        --> TGATGATGCAACAGAGCCAGCCTTCTTTATCTCTCCTTACTTCTTCTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545939       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD968974       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968851       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901771       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538883       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD975470       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540019       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540394       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536937       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755920       --> TGATGATGCAACAGAGCCAGCCTTCTTTATCTCTCCTTACTTCTTCTCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540426       --> TGATGCTGCAACAGAGCCAGCCTTCTTTATCTCTCCTTACTTCTTCTCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV550694       --> TGATGCTGCAACAGAGCCAGCCTTCTTTATCTCTCCTTACTTCTTCTCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD973096       --> TGATGCTGCAACAGAGCCAGCCTTCTTTATCTCTCCTTACTTCTTCTCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973247       --> TGATGCTGCAACAGAGCCAGCCTTCTTTATCTCTCCTTACTTCTTCTCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974106       --> TGATGATGCAACAGAGCCAGCCTTCTTTATCTCTCCTTACTTCTTCTCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW732919       --> TGATGATGCAACAGAGCCAGCCTTCTTTATCTCTACTTACTTCTTCTCTC  Raphanus sativus cv Rat-Tail Radish #3870
EX903721       --> TGATGATGCAACAGAGCCAGCCTTCTTTATCTCTACTTACTTCTTCTCTC  Raphanus sativus cv Rat-Tail Radish #3870
FD979435       --> TGATGATGCAACAGAGCCAGCCTTCTTTATCTCTCCTTACTTCTTCTCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982070       --> TGATGATGCAACAGAGCCAGCCTTCTTTATCTCTACTTACTTCTTCTCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY437635       --> TGATGATGCAACAGAGCCAGCCTTCTTTATCTCTACTTACTTCTTCTCTC  Raphanus sativus cv GSK3-1
FY439357       --> TGATGATGCAACAGAGCCAGCCTTCTTTATCTCTACTTACTTCTTCTCTC  Raphanus sativus cv GSK3-1
FY436942       --> TGATGATGCAACAGAGCCAGCCTTCTTTATCTCTACTTACTTCTTCTCTC  Raphanus sativus cv GSK3-1
FD542945       --> TGATGCTGCAACAGAGCCAGCCTTCTTTATCTCTCCTTACTTCTTCTCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905306       --> TGATGCTGCAACAGAGCCAGCCTTCTTTATCTCTCCTTACTTCTTCTCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548512       --> TGATGATGCAACAGAGCCAGCCTTCTTTATCTCTACTTACTTCTTCTCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY434541       --> TGATGATGCAACAGAGCCAGCCTTCTTTATCTCTACTTACTTCTTCTCTC  Raphanus sativus cv GSK3-1
EV534875       --> TGATGATGCAACAGAGCCAGCTCTCTTTATCTCTCCTTACTTCTTCTCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535810       --> ..........ACAGAGCCAGCCTTCTTTATCTCTCCTTACTTCTTCTCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW732906       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV535299       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               151    -    201
UN16493        --> TCTGACTTTAATGGCGCCAAGCTCAACCTACAAGTCCAGTACAAGAGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545939       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD968974       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968851       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901771       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538883       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD975470       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540019       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540394       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536937       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755920       --> TCTGACTTTAATGGCGCCAAGCTCAACCTACAAGTCCAGTACAAGAGGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540426       --> TCTGACTTTAATGGCGCCAAGCTCAACCTACAAGTCCAGTACAAGAGGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV550694       --> TCTGACTTTAATGGCGCCAAGCTCAACCTACAAGTCCAGTACAAGAGGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD973096       --> TCTGACTTTAATGGCGCCAAGCTCAACCTACAAGTCCAGTACAAGAGGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973247       --> TCTGACTTTAATGGCGCCAAGCTCAACCTACAAGTCCAGTACAAGAGGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974106       --> TCTGACTTTAATGGCGCCAAGCTCAACCTACAAGTCCAGTACAAGAGGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW732919       --> TCTGACTTTAATGGCGCCAAGCTCAACCTACAAGTCCAGTACAAGAGGAA  Raphanus sativus cv Rat-Tail Radish #3870
EX903721       --> TCTGACTTTAATGGCGCCAAGCTCAACCTACAAGTCCAGTACAAGAGGAA  Raphanus sativus cv Rat-Tail Radish #3870
FD979435       --> TCTGACTTTAATGGCGCCAAGCTCAACCTACAAGTCCAGTACAAGAGGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982070       --> TCTGACTTTAATGGCGCCAAGCTCAACCTACAAGTCCAGTACAAGAGGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY437635       --> TCTGACTTTAATGGCGCCAAGCTCAACCTACAAGTCCAGTACAAGAGGAA  Raphanus sativus cv GSK3-1
FY439357       --> TCTGACTTTAATGGCGCCAAGCTCAACCTACAAGTCCAGTACAAGAGGAA  Raphanus sativus cv GSK3-1
FY436942       --> TCTGACTTTAATGGCGCCAAGCTCAACCTACAAGTCCAGTACAAGAGGAA  Raphanus sativus cv GSK3-1
FD542945       --> TCTGACTTTAATGGCGCCAAGCTCAACCTACAAGTCCAGTACAAGAGGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905306       --> TCTGACTTTAATGGCGCCAAGCTCAACCTACAAGTCCAGTACAAGAGGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548512       --> TCTGACTTTAATGGCGCCAAGCTCAACCTACAAGTCCAGTACAAGAGGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY434541       --> TCTGACTTTAATGGCGCCAAGCTCAACCTACAAGTCCAGTACAAGAGGAA  Raphanus sativus cv GSK3-1
EV534875       --> TCTGACTTTAATGGCGCCAAGCTCAACCTACAAGTCCAGTACAAGAGGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535810       --> TCTGACTTTAATGGCGCCAAGCTCAACCTACAAGTCCAGTACAAGAGGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW732906       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV535299       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               201    -    251
UN16493        --> AGTTCAACAGCCAAAAGGAGCACTCTATGTATCAGCATCGAGCGAGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545939       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD968974       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968851       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901771       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538883       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD975470       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540019       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540394       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536937       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755920       --> AGTTCAACAGCCAAAAGGAGCACTCTATGTATCAGCATCGAGCGAAAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540426       --> AGTTCAACAGCCAAAAGGAGCACTCTATGTATCAGCATCGAGCGAGAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV550694       --> AGTTCAACAGCCAAAAGGAGCACTCTATGTATCAGCATCGAGCGAGAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD973096       --> AGTTCAACAGCCAAAAGGAGCACTCTATGTATCAGCATCGAGCGAGAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973247       --> AGTTCAACAGCCAAA...................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974106       --> AGTTCAACAGCCAAAAGGAGCACTCTATGTATCAGCATCTAGCGAAAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW732919       --> GGTTCAACAGCCAAAAGGAGCACTCTATGTATCAGCATCGAGCGAGAAGG  Raphanus sativus cv Rat-Tail Radish #3870
EX903721       --> GGTTCAACAGCCAAAAGGAGCACTCTATGTATCAGCATCGAGCGAGAAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD979435       --> AGTTCAACAGCCAATAGGAGCACTCTATGTATCAGCATCGAGCGAGAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982070       --> GGTTCAACAGCCAAAAGGAGCACTCTATGTATCAGCATCGAGTGAAAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY437635       --> GGTTCAACAGCCAAAAGGAGCACTCTATGTATCAGCATCGAGCGAGAAGA  Raphanus sativus cv GSK3-1
FY439357       --> GGTTCAACAGCCAAAAGGAGCACTCTATGTATCAGCATCGAGCGAGAAGA  Raphanus sativus cv GSK3-1
FY436942       --> GGTTCAACAGCCAAAAGGAGCACTCTATGTATCAGCATCGAGCGAGAAGA  Raphanus sativus cv GSK3-1
FD542945       --> AGTTCAACAGCCAAAAGGAGCACTCTATGTATCAGCATCGAGCGAGAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905306       --> AGTTCAACAGCCAAAAGGAGCACTCTATGTATCAGCATCGAGCGAGAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548512       --> GGTTCAACAGCCAAAAGGAGCACTCTATGTATCAGCATCGAGTGAAAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY434541       --> GGTTCAACAGCCAAAAGGAGCACTCTATGTATCAGCATCGAGCGAGAAGA  Raphanus sativus cv GSK3-1
EV534875       --> AGTTCAACAGCCAAAAGGAGCACTCTATGTATCAGCATCGAGCGAAAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535810       --> AGTTCAACAGCCAAAAGGAGCACTCTATGTATCAGCATCGAGCGAAAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW732906       --> ....................................gtccAGCGAAAAGA  Raphanus sativus cv Rat-Tail Radish #3870
EV535299       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               251    -    301
UN16493        --> AGATTCTTATAATGGGTGGCACTCGGTTCATTGGTATCTTCTTGTCCAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545939       <-- ..................................................
FD968974       <-- ..................................................
FD968851       <-- ..................................................
EY901771       <-- ..................................................
FD538883       <-- ..................................................
FD975470       <-- ..................................................
EV540019       <-- ..................................................
EV540394       <-- ..................................................
FD536937       <-- ..................................................
EX755920       --> AGATTCTTATAATGGGTGGCACTCGATTCATCGGTATCTTCTTGTCCAGG
FD540426       --> AGATTCTTATAATGGGTGGCACTCGGTTCATTGGTATCTTCTTGTCCAGG
EV550694       --> AGATTCTTATAATGGGTGGCACTCGGTTCATTGGTATCTTCTTATCCAGG
FD973096       --> AGATTCTTATAATGGGTGGCATTCGGTTCATTGGTATCTTCTTGTCCAGG
FD973247       --> ..................................................
FD974106       --> AGATTCTTATAATGGGTGGCACTCGATTCATCGGTATCTTCTTGTCCAGG
EW732919       --> AGATTCTTATAATGGGTGGCACTCGGTTCATTGGTATCTTCTTGTCCAGG
EX903721       --> AGATTCTTATAATGGGTGGCACTCGGTTCATTGGTATCTTCTTGTCCAGG
FD979435       --> AGATTCTTATAATGGGTGGCACTCGGTTCATTGGTATCTTCTTGTCCAGG
FD982070       --> AGATTCTTATTATGGGTGGCACTCGATTCATCGGTATCTTCTTGTCCAGG
FY437635       --> AGATTCTTATAATGGGTGGCACTCGGTTCATTGGTATCTTCTTGTCCAGG
FY439357       --> AGATTCTTATAATGGGTGGCACTCGGTTCATTGGTATCTTCTTGTCCAGG
FY436942       --> AGATTCTTATAATGGGTGGCACTCGGTTCATTGGTATCTTCTTGTCCAGG
FD542945       --> AGATTCTTATAATGGGTGGCACTCGGTTCATTGGTATCTTCTTGTCCAGG
EY905306       --> AGATTCTTATAATGGGTGGCACTCGGTTCATTGGTATCTTCTTGTCCAGG
EV548512       --> AGATTCTTATTATGGGTGGCACTCGATTCATCGGTATCTTCTTGTCCAGG
FY434541       --> AGATTCTTATAATGGGTGGCACTCGGTTCATTGGTATCTTCTTGTCCAGG
EV534875       --> AGATTCTTATAATGGGTGGCACTCGATTCATCGGTATCTTCTTGTCCAGG
EV535810       --> AGATTCTTATAATGGGTGGCACTCGATTCATCGGTATCTTCTTGTCCAGG
EW732906       --> AGATTCTTATTATGGGTGGCACACGATTCATTGGTATCTTCTTATCCAGG
EV535299       --> ..................................................

               301    -    351
UN16493        --> CTCCTTGTCAAAGAGGGACATCAGGTTACATTGTTCACAAGAGGTAAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545939       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD968974       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968851       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901771       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538883       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD975470       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540019       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540394       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536937       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755920       --> CTCCTTGTCAAAGAGGGACATCAGGTTACATTGTTCACAAGAGGTAAATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540426       --> CTCCTTGTCAAAGAGGGACATCAGGTTACATTGTTCACAAGAGGTAAATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV550694       --> CTCCTTGTTAAAGAGGGACATCAGGTTACATTGTTCACAAGAGGTAAATC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD973096       --> CTCCTTGTCAAAGAGGGACATCAGGTTACATTGTTCACAAGAGGTAAATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973247       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974106       --> CTCCTTGTCAAAGAGGGACATCAGGTTACATTGTTCACAAGAGGTAAATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW732919       --> CTCCTTGTCAAAGAGAGACATCAGGTTACATTGTTCACAAGAGGTAAATC  Raphanus sativus cv Rat-Tail Radish #3870
EX903721       --> CTCCTTGTCAAAGAGAGACATCAGGTTACATTGTTCACAAGAGGTAAATC  Raphanus sativus cv Rat-Tail Radish #3870
FD979435       --> CTCCTTGTCAAAGAGGGACATCAGGTTACATTGTTCACAAGAGGTAAATC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982070       --> CTCCTTGTCAAAGAGGGACATCAGGTTACATTGTTCACAAGAGGTAAATC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY437635       --> CTCCTTGTCAAAGAGAGACATCAGGTTACATTGTTCACAAGAGGTAAATC  Raphanus sativus cv GSK3-1
FY439357       --> CTCCTTGTCAAAGAGAGACATCAGGTTACATTGTTCACAAGAGGTAAATC  Raphanus sativus cv GSK3-1
FY436942       --> CTCCTTGTCAAAGAGAGACATCAGGTTACATTGTTCACAAGAGGTAAATC  Raphanus sativus cv GSK3-1
FD542945       --> CTCCTTGTCAAAGAGGGACATCAGGTTACATTGTTCACAAGAGGTAAATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905306       --> CTCCTTGTCAAAGAGGGACATCAGGTTACATTGTTCACAAGAGGTAAATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548512       --> CTCCTTGTCAAAGAGGGACATCAGGTTACATTGTTCACAAGAGGTAAATC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY434541       --> CTCCTTGTCAAAGAGAGACATCAGGTTACATTGTTCACAAGAGGTAAATC  Raphanus sativus cv GSK3-1
EV534875       --> CTCCTTGTCAAAGAGGGACATCAGGTTACATTGTTCACAAGAGGTAAATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535810       --> CTCCTTGTCAAAGAGGGACATCAGGTTACATTGTTCACAAGAGGTAAATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW732906       --> TTCCTTGTCAAAGAGGGACATCAGGTTACATTGTTCACAAGAGGTAAATC  Raphanus sativus cv Rat-Tail Radish #3870
EV535299       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               351    -    401
UN16493        --> TCCTATTGCCAAACAATTGCCTGGCGAATCTGACCAAGACTTTGCTGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545939       <-- ..................................................
FD968974       <-- ..................................................
FD968851       <-- ..................................................
EY901771       <-- ..................................................
FD538883       <-- ..................................................
FD975470       <-- ..................................................
EV540019       <-- ..................................................
EV540394       <-- ..................................................
FD536937       <-- ..................................................
EX755920       --> TCCTATTGCCAAACAATTGCCTGGCGAATCTGACCAAGACTTTGCTGATT
FD540426       --> TCCTATTGCCAAACAATTGCCTGGCGAATCTGACCAAGACTTTGCTGATT
EV550694       --> TCCTATTGCCAAACAATTGCCTGGCGAATCTGACCAAGACTTTGCTGATT
FD973096       --> TCCTATTGCCAAACAATTGCCTGGCGAATCTGACCAAGACTTTGCTGATT
FD973247       --> ..................................................
FD974106       --> TCCTATTGCCAAACAATTGCCTGGCGAATCTGACCAAGACTTTGCTGATT
EW732919       --> TCCTATTGCCAAACAATTGCCTGGCGAATCTGACCAAGACTTTGCTGATT
EX903721       --> TCCTATTGCCAAACAATTGCCTGGCGAATCTGACCAAGACTTTGCTGATT
FD979435       --> TCCTATTGCCAAACAATTGCCTGGCGAATCTGACCAAGACTTTGCTGATT
FD982070       --> TCCTATTGCCAAACAATTGCCTGGTGAATCTGACCAAGACTTTGCTGATT
FY437635       --> TCCTATTGCCAAACAATTGCCTGGCGAATCTGACCAAGACTTTGCTGATT
FY439357       --> TCCTATTGCCAAACAATTGCCTGGCGAATCTGACCAAGACTTTGCTGATT
FY436942       --> TCCTATTGCCAAACAATTGCCTGGCGAATCTGACCAAGACTTTGCTGATT
FD542945       --> TCCTATTGCCAAACAATTGCCTGGCGAATCTGACCAAGACTTTGCTGATT
EY905306       --> TCCTATTGCCAAACAATTGCCTGGCGAATCTGACCAAGACTTTGCTGATT
EV548512       --> TCCTATTGCCAAACAATTGCCTGGCGAATCTGACCAAGACTTTGCTGATT
FY434541       --> TCCTATTGCCAAACAATTGCCTGGCGAATCTGACCAAGACTTTGCTGATT
EV534875       --> TCCTATTGCCAAACAATTGCCTGGCGAATCTGACCAAGACTTTGCTGATT
EV535810       --> TCCTATTGCCAAACAATTGCCTGGCGAATCTGACCAAGACCTTGCTGATT
EW732906       --> TCCTATTGCCAAACAATTGCCTGGCGAATCTGACCAAGACTTTGCTGATT
EV535299       --> ..................................................

               401    -    451
UN16493        --> TTTCTTCCAAGATTCTTCACTTGAAAGGAGACAGAAAGGACTATGACTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545939       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD968974       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968851       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901771       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538883       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD975470       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540019       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540394       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536937       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755920       --> TTTCCTCTAAGATTCTTCACTTGAAAGGAGACAGAAAGGATTATGACTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540426       --> TTTCTTCCGAGATTCTTCACTTGAAAGGAGACAGAAAGGACTATGACTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV550694       --> TTTCTTCCAAGATTCTTCACTTGAAAGGAGACAGAAAGGACTATGACTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD973096       --> TTTCTTCCAAGATTCTTCACTTGAAAGGAGACAGAAAGGACTATGACTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973247       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974106       --> TTTCCTCCAAGATTCTTCACTTGAAAGGAGACAGAAAGGATTATGACTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW732919       --> TTTCTTCAAAGATTCTTCACTTGAAAGGAGACAGAAAGGACTATGACTTT  Raphanus sativus cv Rat-Tail Radish #3870
EX903721       --> TTTCTTCAAAGATTCTTCACTTGAAAGGAGACAGAAAGGACTATGACTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD979435       --> TTTCTTCCAAGATTCTTCACTTGAAAGGAGACAGAAAGGACTATGACCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982070       --> TTTCTTCCAAGATTCTTCACTTGAAAGGAGACAGAAAAGACTATGACTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FY437635       --> TTTCTTCAAAGATTCTTCACTTGAAAGGAGACAGAAAGGACTATGACTTT  Raphanus sativus cv GSK3-1
FY439357       --> TTTCTTCAAAGATTCTTCACTTGAAAGGAGACAGAAAGGACTATGACTTT  Raphanus sativus cv GSK3-1
FY436942       --> TTTCTTCAAAGATTCTTCACTTGAAAGGAGACAGAAAGGACTATGACTTT  Raphanus sativus cv GSK3-1
FD542945       --> TTTCTTCCAAGATTCTTCACTTGAAAGGAGACA-AAAGGACTATGACTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905306       --> TTTCTTCCAAGATTCTTCACTTGAAAGGAGACAGAAAGGACTATGACTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548512       --> TTTCTTCCAAGATT-TTCACTTGAAAGGAGACAGAAAAGACTATGACTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FY434541       --> TTTCTTCAAAGATTCTTCACTTGAAAGGAGACAGAAAGGACTATGACTTT  Raphanus sativus cv GSK3-1
EV534875       --> TTTCCTCCAAGATTCTTCACTTGAAAGGAGACAGAAAGGATTATGACTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535810       --> TTTCCTCCAAGATTCTTCACTTGAAAGGAGACAGAAAGGATTATGACTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW732906       --> TTTCTTCCAAGATTCTTCACTTGAAAGGAGACAGAAAGGACTATGACTTT  Raphanus sativus cv Rat-Tail Radish #3870
EV535299       --> ............................gGACAGAAAGGATTATGACTTT  Raphanus raphanistrum subsp. raphanistrum (MS)

               451    -    501
UN16493        --> GTGAAGTCAAGTCTTTCAGCTGAAGGCTTCGATGTTGTTTATGATATCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545939       <-- ..........................CTTCGATGTTGTTTATGATATCAA
FD968974       <-- ..................................................
FD968851       <-- ..................................................
EY901771       <-- ..................................................
FD538883       <-- ..................................................
FD975470       <-- ..................................................
EV540019       <-- ..................................................
EV540394       <-- ..................................................
FD536937       <-- ..................................................
EX755920       --> GTGAAGTCAAGTCTTTCAGCTGAGGGCTTCGATGTTGTTTATGATATCAA
FD540426       --> GTGAAGTCAAGTCTTTCAGCTGAAGGCTTCGATGTTGTTTATGATATCAA
EV550694       --> GTGAAGTCAAGTCTTTCAGCTGAAGGCTTCGATGTTGTTTATGATATCAA
FD973096       --> GTGAAGTCAAGTCTTTCAGCTGAAGGCTTCGATGTTGTTTATGATATCAA
FD973247       --> ..................................................
FD974106       --> GTGAAGTCAAGTCTTTCAGCTGAGGGCTTCGATGTTGTTTATGATATCAA
EW732919       --> GTGAAGTCAAGTCTTTCAGCTGAAGGCTTCGATGTTGTTTATGATATCAA
EX903721       --> GTGAAGTCAAGTCTTTCAGCTGAAGGCTTCGATGTTGTTTATGATATCAA
FD979435       --> -TGAAGTCAAGTCTCTCAGCTGAAGGCTTCGATGTTGTTTATGATATCAA
FD982070       --> GTGAAGTCAAGTCTTTCAGCTGAAGGCTTCGATGTTGTTTATGATATCAA
FY437635       --> GTGAAGTCAAGTCTTTCAGCTGAAGGCTTCGATGTTGTTTATGATATCAA
FY439357       --> GTGAAGTCAAGTCTTTCAGCTGAAGGCTTCGATGTTGTTTATGATATCAA
FY436942       --> GTGAAGTCAAGTCTTTCAGCTGAAGGCTTCGATGTTGTTTATGATATCAA
FD542945       --> GTGAAGTCAAGTCTTTCAGCTGAAGGCTTCGATGTTGTTTATGATATCAA
EY905306       --> GTGAAGTCAAGTCTTTCAGCTGAAGGCTTCGATGTTGTTTATGATATCAA
EV548512       --> GTGAAGTCAAGTCTTTCAGCTGAAGGCTTCGATGTTGTTTATGATATCAA
FY434541       --> GTGAAGTCAAGTCTTTCAGCTGAAGGCTTCGATGTTGTTTATGATATCAA
EV534875       --> GTGAAGTCAAGTCTTTCAGCTGAGGGCTTCGATGTTGTTTATGATATCAA
EV535810       --> GTGAAGTCAAGTCTTTCAGCTGAGGGCTTCGATGTTGTTTATGATATCAA
EW732906       --> GTGAAGTCAAGTCTTTCAGCTGAAGGCTTCGATGTTGTTTATGATATCTA
EV535299       --> GTGAAGTCAAGTCTTTCAGCTGAGGGCTTCGATGTTGTTTATGATATCAA

               501    -    551
UN16493        --> CGGGAGGGAAGCTGAAGAAGTTGAGCCCATAATAGAGGCACTTCCTAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545939       <-- CGGGAGGGAAGCTGAAGAAGTTGAGCCTATAATAGAGGCACTTCCTAAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD968974       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968851       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901771       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538883       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD975470       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540019       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540394       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536937       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755920       --> CGGGAGGGAAGCTGAAGAAGTTGAGCCCATAATAGAGGCACTTCCTAAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540426       --> CGGGAGGGAAGCTGAAGAAGTTGAGCCCATATTAGAGGCACTTCCTAAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV550694       --> CGGGAGGGAAGCTGAAGAAGTTGAGCCTATAATAGAGGCACTTCCTAAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD973096       --> CGGGAGGGAAGCTGAAGAAGTTGAGCCCATATTAGAGGCACTTCCTAAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973247       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974106       --> CGGGAGGGAAGCTGAAGAAGTTGAGCCCATAATAGAGGCACTTCCTAAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW732919       --> CGGGAGGGAAGCTGAAGAAGTTGAGCCTATAATAGAGGCACTTCCTAAAC  Raphanus sativus cv Rat-Tail Radish #3870
EX903721       --> CGGGAGGGAAGCTGAAGAAGTTGAGCCTATAATAGAGGCACTTCCTAAAC  Raphanus sativus cv Rat-Tail Radish #3870
FD979435       --> CGGGAGGGAAGCTGAAGAAGTTGAGCCCATATTAGATGCACTTCCTAAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982070       --> CGGGAGGGAAGCTGAAGAAGTTGAGCCCATAATAGAGGCACTTCCTAAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY437635       --> CGGGAGGGAAGCTGAAGAAGTTGAGCCTATAATAGAGGCACTTCCTAAAC  Raphanus sativus cv GSK3-1
FY439357       --> CGGGAGGGAAGCTGAAGAAGTTGAGCCTATAATAGAGGCACTTCCTAAAC  Raphanus sativus cv GSK3-1
FY436942       --> CGGGAGGGAAGCTGAAGAAGTTGAGCCTATAATAGAGGCACTTCCTAAAC  Raphanus sativus cv GSK3-1
FD542945       --> CGGGAGGGAAGCTGAAGAAGTTGAGCCCATATTAGAGGCACTTCCTAAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905306       --> CGGGAGGGAAGCTGAAGAAGTTGAGCCCATATTAGAGGCACTTCCTAAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548512       --> CGGGAGGGAAGCTGAAGAAGTTGAGCCCATAATAGAGGCACTTCCTAAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY434541       --> CGGGAGGGAAGCTGAAGAAGTTGAGCCTATAATAGAGGCACTTCCTAAAC  Raphanus sativus cv GSK3-1
EV534875       --> CGGGAGGGAAGCTGAAGAAGTTGAGCCCATAATAGAGGCACTTCCTAAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535810       --> CGGGAGGGAAGCTGAAGAAGTTGAGCCCATAATAGAGGCACTTCCTAAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW732906       --> CGGGAGGGAAGCTGAAGAAGTTGAGCCCATATTAGATGCACTTCCTAGAC  Raphanus sativus cv Rat-Tail Radish #3870
EV535299       --> CGGGAGGGAAGCTGAAGAAGTTGAGCCCATAATAGAGGCACTTCCTAAAC  Raphanus raphanistrum subsp. raphanistrum (MS)

               551    -    601
UN16493        --> TAGAACAGTACATCTACTGTTCTTCAGCTGGTGTTTACCTGAAATCTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545939       <-- TAGAACAGTACATCTACTGTTCTTCAGCTGGTGTTTACCTGAAATCTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD968974       <-- .gaAACAGTACATCTACTGTTCTTCAGCTGGTGTTTAC-TGAAATCTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968851       <-- ..........................................AATCTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901771       <-- ................................................AT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538883       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD975470       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540019       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540394       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536937       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755920       --> TAGAACAGTACATCTACTGTTCTTCAGCTGGTGTTTACCTGAAATCTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540426       --> TAGAACAGTACATCTACTGTTCTTCAGCTGGTGTTTACCTGAAATCTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV550694       --> TAGAACAGTACATCTACTGTTCTTCAGCTGGTGTTTACCTGAAATCTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD973096       --> TAGAACAGTACATCTACTGTTCTTCAGCTGGTGTTTACCTGAAATCTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973247       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974106       --> TAGAACAGTACATCTACTGTTCTTCAGCTGGTGTTTACCTGAAATCTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW732919       --> TAGAACAGTACATCTACTGTTCTTCAGCTGGTGTTTACCTCAAATCTGAT  Raphanus sativus cv Rat-Tail Radish #3870
EX903721       --> TAGAACAGTACATCTACTGTTCTTCAGCTGGTGTTTACCTCAAATCCGAT  Raphanus sativus cv Rat-Tail Radish #3870
FD979435       --> TAGAACAGTACATCTACTGTTCTTCAGCTGGTGTTTACCTGAAATCTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982070       --> TAGAACAGTACATCTACTGTTCTTCAGCTGGTGTTTACCTGAAATCTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FY437635       --> TAGAACAGTACATCTACTGTTCTTCAGCTGGTGTTTACCTCAAATCTGAT  Raphanus sativus cv GSK3-1
FY439357       --> TAGAACAGTACATCTACTGTTCTTCAGCTGGTGTTTACCTCAAATCTGAT  Raphanus sativus cv GSK3-1
FY436942       --> TAGAACAGTACATCTACTGTTCTTCAGCTGGTGTTTACCTCAAATCTGAT  Raphanus sativus cv GSK3-1
FD542945       --> TAGAACAGTACATCTACTGTTCTTCAGCTGGTGTTTACCTGAAATCTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905306       --> TAGAACAGTACATCTACTGTTCTTCAGCTGGTGTTTACCTGAAATCTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548512       --> TAGAACAGTACATCTACTGTTCTTCAGCTGGTGTTTACCTGAAATCTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FY434541       --> TAGAACAGTACATCTACTGTTCTTCAGCTGGTGTTTACCTCAAATCTGAT  Raphanus sativus cv GSK3-1
EV534875       --> TAGAACAGTACATCTACTGTTCTTCAGCTGGTGTTTACCTGAAATCTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535810       --> TAGAACAGTACATCTACTGTTCTTCAGCTGGTGTTTACCTGAAATCTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW732906       --> TAGAACAGTATATCTACTGTTCTTCAGCTGGTGTTTACCTCAAATCTGAT  Raphanus sativus cv Rat-Tail Radish #3870
EV535299       --> TAGAACAGTACATCTACTGTTCTTCAGCTGGTGTTTACCTGAAATCTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)

               601    -    651
UN16493        --> GTCTTGCCACACTGTGAGGTGGATGCAGTTGACCCGAAGAGCAGGCACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545939       <-- ATCTTGCCACACTGTGAGGTGGATGCAGTTGACCCGAAGAGCAGGCACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD968974       <-- GTCTTGCCACACTGTGAGGTGGATGCAGTTGACCCGAAGAGCAGGCA-AA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968851       <-- GTCTTGCCACACTGTGAGGTGGATGCAGTTGACCCGAAGAGCAGGCA-AA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901771       <-- GTCTTGCCACACTGTGAGGTGGATGCAGTTGACCCGAAGAGCAGGCACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538883       <-- .......................................AGCAGGCACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD975470       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540019       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540394       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536937       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755920       --> GTCTTGCCACACTGTGAGGTGGATGCAGTTGACCCGAAGA..........  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540426       --> GTCTTGCCACACTGTGAGGTGGATGCAGTTGACCCGAAGAGCACGCAC..  Raphanus raphanistrum subsp. raphanistrum (MS)
EV550694       --> ATCTTGCCACACTGTGAGGTGGATGCAGTTGACCCGAAGAGCAGGCACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD973096       --> GTCTTGCCACACTGTGAGGTGGATGCAGTTGACCCGAAGAGCAG-CA-AA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973247       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974106       --> GTCTTGCCA.........................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW732919       --> ATCTTGCCACACTGTGAGGTGGATGCAGTTGACCCGAAGAGCAGGCACAA  Raphanus sativus cv Rat-Tail Radish #3870
EX903721       --> ATCTTGCCACACTGTGAGGTGGATGCAGTTGACCCGAAGAGCAGGCACAA  Raphanus sativus cv Rat-Tail Radish #3870
FD979435       --> GTCTTGCCACACTGTGAGGTGGATGCAGTTGACCCGAAGAGCAGGCACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982070       --> ATCTTGCCACACTGTGAGGTGGATGCAGTTGACCCGAAGAGCAGGCACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY437635       --> ATCTTGCCACACTGTGAGGTGGATGCAGTTGACCCGAAGAGCAGGCACAA  Raphanus sativus cv GSK3-1
FY439357       --> ATCTTGCCACACTGTGAGGTGGATGCAGTTGACCCGAAGAGCAGGCACAA  Raphanus sativus cv GSK3-1
FY436942       --> ATCTTGCCACACTGT...................................  Raphanus sativus cv GSK3-1
FD542945       --> GTCTTGCCACACTGTGAGGTGGATGCAGTTGACCCGAAGAGCAGGCACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905306       --> GTCTTGCCACACTGTGAGGTGGATGCAGTTGACCCGAAGAGCAGGCACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548512       --> ATCTTGCCACACCGTGAGGTGGATGCAGTTGACCCGAAGAGCAGGCACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY434541       --> ATCTTGCCACACTGTGAGGTGGATGCAGTTGACCCGAAGAGCAGGCACAA  Raphanus sativus cv GSK3-1
EV534875       --> GTCTTGCCACACTGTGAGGTGGATGCAGTTGACCCGAAGAGCAGGCACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535810       --> GTCTTGCCACACTGTGAGGTGGATGCAGTTAACCCGAAGAGCAGGCACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW732906       --> ATCTTGCCACACTGTGAGGTGGATGCAGTTGACCCGAAGAGTAGGCACAA  Raphanus sativus cv Rat-Tail Radish #3870
EV535299       --> GTCTTGCCACACTGTGAGGTGGATGCAGTTGACCCGAAGAGCAGGCACAA  Raphanus raphanistrum subsp. raphanistrum (MS)

               651    -    701
UN16493        --> GGGGAAGCTGGAGACAGAGAGCTTACTGCAATCAAAAGGTGTAAACTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545939       <-- GGGGAAGCTGGAGACAGAGAGCTTACTGCAATCAAAAGGTGTAAACTGGA
FD968974       <-- GGGGAAGCTGGGGGCAGAGAGCTTACTGCAATCAAAAGGTGTAAACTGGA
FD968851       <-- GGGGAAGCTGGGGGCAGAGAGCTTACTGCAATCAAAAGGTGTAAACTGGA
EY901771       <-- GGGGAAGCTGGAGACAGAGAGCTTACTGCAATCAAAAGGTGTAAACTGGA
FD538883       <-- GGGGAAGCTGGAGACAGAGAGCTTACTGCAATCAAAAGGTGTAAACTGGA
FD975470       <-- ..............................caaAAAAGGTGTAAACTGGA
EV540019       <-- ..................................................
EV540394       <-- ..................................................
FD536937       <-- ..................................................
EX755920       --> ..................................................
FD540426       --> ..................................................
EV550694       --> GGGGAAGCTGGAGACAGAGAGCTTACTGCAATCAAAAG-TGTAAACTGGA
FD973096       --> GGGGAAGCTGGGGGCAGAGAGCTTACTGCAATC.................
FD973247       --> ..................................................
FD974106       --> ..................................................
EW732919       --> GGGGAAGCTGGAGACAGAGAGCTTACTGCAATCAAAAGGTGTAAACTGGA
EX903721       --> GGGGAAGCTGGAGACAGAGAGCTTACTGCAATCAAAAG-TGTAAACTGGA
FD979435       --> GGGGAAGCTGGAGACAGAGAGCTTACTGCAA---AAACGTGTAAACTGGA
FD982070       --> GGGGAAGCTGGAGACAGAGAGCTTACTGCAATCAAA-GGTGTAAACTGGA
FY437635       --> GGGGAAGCTGGAGACAGAGAGCTTACTGCAATCAAAAGGTGTAAACTGGA
FY439357       --> GGGGAAGCTGGAGACAGAGAGCTTACTGCAATCAAAAGGTGTAAACTGGA
FY436942       --> ..................................................
FD542945       --> GGGGAAGCTGGAGACAGAGAGCTTACTGCAATCAAAAGGTGTAAACTGGA
EY905306       --> GGGGAAGCTGGAGACAGAGAGCTTACTGCAATCAAAAGGTGTAAACTGGA
EV548512       --> GGGGAAGCTGGAGACAGAGAGCTTACTGCAATCAAAAGGTGTAAACTGGA
FY434541       --> GGGGAAGCTGGAGACAGAGAGCTTACTGCAATCAAAAGGTGTAAACTGGA
EV534875       --> GGGGAAGCTGGAGACAGAGAGCTTACTGCAATCAAAAGGTGTAAACTGGA
EV535810       --> GGGGAAGCTGGAGACAGAGAGCTTACTGCAATCAAAAGGTGTAAACTGGA
EW732906       --> GGGGAAGCTGGAGACAGAGAGCTTACTGCAATCAAAAGGTGTAAACTGGA
EV535299       --> GGGGAAGCTGGAGACAGAGAGCTTACTGCAATCAAAAGGTGTAAACTGGA

               701    -    751
UN16493        --> CTTCTATACGTCCTGTCTACATCTACGGTCCATTGAACTACAACCCCGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545939       <-- CTTCTATACGTCCTGTCTACATCTACGGTCCATTGAGCTACAACCCCGTA
FD968974       <-- CTTCTATACGTCCTGTCTACATCTACGGTCCATTGAACTACAACCCCGTT
FD968851       <-- CTTCTATACGTCCTGTCTACATCTACGGTCCATTGAACTACAACCCCGTT
EY901771       <-- CTTCTATACGTTCTGTCTACATCTACGGTCCATTGAACTACAACCCCGTT
FD538883       <-- CTTCTATACGTCCTGTCTACATCTACGGTCCATTGAACTACAACCCCGTT
FD975470       <-- CTTCTATACGTCCTGTCTACATCTACGGTCCATTGAACTACAACCCCGTT
EV540019       <-- ..................ACATCTACGGTCCATTGAACTACAACCCCGTA
EV540394       <-- ..................ACATCTACGGTCCATTGAACTACAACCCCGTA
FD536937       <-- ...................CATCTACGGTCCATTGAACTACAACCCCGTT
EX755920       --> ..................................................
FD540426       --> ..................................................
EV550694       --> CTTCTATACGTCCTGTCTACATCTACGGTCCATTGAGCTACAACCCCGTA
FD973096       --> ..................................................
FD973247       --> ..................................................
FD974106       --> ..................................................
EW732919       --> CTTCCATACGTCCTGTCTACATCTACGGTCCATTGAACTACAACCCCGTC
EX903721       --> CTTCCATACGTCCTGTCTACATCTACGGTCCATTGAACTACACCCCg...
FD979435       --> CTTCTATACGTCCTGTCTACATCTACGGTCCATTGAACTACAACCCCGTT
FD982070       --> CTTCCATACGTCCTGTCTACATCTACG-TCCATTGAACTACA-CCCCGTc
FY437635       --> CTTCCATACGTCCTGTCTACATCTACGGTCCATTGAACTACAACCCCGTC
FY439357       --> CTTCCATACGTCCTGTCTACATCTACGGTCCATTGAACTACAACCCCGTC
FY436942       --> ..................................................
FD542945       --> CTTCTATACGTCCTGTCTACATCTACGGTCCATTGAACTACAACCCCGTT
EY905306       --> CTTCTATACGTTCTGTCTACATCTACGGTCCATTGAACTACAACCCCGTT
EV548512       --> CTTCCATACGTCCTGTCTACATCTACGGTTCATTGAACTACAACCCCGTC
FY434541       --> CTTCTATACGTCCTGTCTACATCTACGGTCCATTGAACTACAACCCCGTA
EV534875       --> CTTCTATACGTCCTGTCTACATCTACGGTCCATTGAACTACAACCCCGTA
EV535810       --> CTTCTATACGTCCTGTCTACATCTACGGTCCATTGAACTACAACCCCGTA
EW732906       --> CTTCTATACGTCCTGTCTACATCTACGGTCCATTGAACTACAACCCCGTC
EV535299       --> CTTCTATACGTCCTGTCTACATCTACGGTCCATTGAACTACAACCCCGTA

               751    -    801
UN16493        --> GAAGAATGGTTCTTCCACCGTCTCAAAGCTGGTCGACCTATCCCAGTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545939       <-- GAAGAATGGTTCTTCCACCGTCTCAAAGCTGGTCGACCTATCCCAGTTCC
FD968974       <-- GAAGAATGGTTCTTCCACCGTCTCAAAGCTGGTCGACCTATCCCAGTTCC
FD968851       <-- GAAGAATGGTTCTTCCACCGTCTCAAAGCTGGTCGACCTATCCCAGTTCC
EY901771       <-- GAAGAATGGTTCTTCCACCGTCTCAAAGCTGGTCGACCTATCCCAGTTCC
FD538883       <-- GAAGAATGGTTCTTCCACCGTCTCAAAGCTGGTCGACCTATCCCAGTTCC
FD975470       <-- GAAGAATGGTTCTTCCACCGTCTCAAAGCTGGTCGACCTATCCCAGTTCC
EV540019       <-- GAAGAATGGTTCTTTCACCGTCTCAAAGCTGGTCGACCTATCCCAGTTCC
EV540394       <-- GAAGAATGGTTCTTTCACCGTCTCAAAGCTGGTCGACCTATCCCAGTTCC
FD536937       <-- GAAGAATGGTTCTTCCACCGTCTCAAAGCTGGTCGACCTATCCCAGTTCC
EX755920       --> ..................................................
FD540426       --> ..................................................
EV550694       --> GAAGAATGGTTCTTCCACCGTCTCAAAGCTGGTCGACCTATCCCAGTTCC
FD973096       --> ..................................................
FD973247       --> ..................................................
FD974106       --> ..................................................
EW732919       --> GAAGAATGGTTCTTCCACCGTCTCAAAGCTGGTCGGCCTATCCCAGTTCC
EX903721       --> ..................................................
FD979435       --> GAAGAATGGTTCTTCCACCGTCTCAAAGCTGGTCGACCTATCCCAGT...
FD982070       --> ga................................................
FY437635       --> GAAGAATGGTTCTTCCACCGTCTCAAAGCTGGTCGACCTATCCCAGTTCC
FY439357       --> GAAGAATGGTTCTTCCACCGTCTCAAAGCTGGTCGACCTATCCCAGTTCC
FY436942       --> ..................................................
FD542945       --> GAAGAATGGTTCTTCCACCGTCTCAAAGCTGGTCGACCTATCCCAGTTCC
EY905306       --> GAAGAATGGTTCTTCCACCGTCTCAAAGCTGGTCGACCTATCCCAGTTCC
EV548512       --> GAAGAATGGTTCTTCCACCGTCTCAAAGCTGGTCGACCTATCCCAGTTCC
FY434541       --> GAAGAATGGTTCTTCCACCGTCTCAAAGCTGGTCGACCTATCCCAGTTCC
EV534875       --> GAAGAATGGTTCTTTCACCGTCTCAAAGCTGGTCGACCTATCCCAGTTCC
EV535810       --> GAAGAATGGTTCTTTCACCGTCTCAAAGCTGGTCGACCTATCCCAGTTCC
EW732906       --> GAAGAATGGTTCTTCCACCGTCTCAAAGCTGGTCGACCTATCCCAGTTCC
EV535299       --> GAAGAATGGTTCTTTCACCGTCTCAAAGCTGGTCGACCTATCCCAGTTCC

               801    -    851
UN16493        --> AAACTCTGGGATCCAGATCTCACAACTCGGTCACGTTAA-GGACTTGGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545939       <-- AAACTCTGGGATCCAGATCTCACAACTCGGTCACGTTAA-GGACTTGGCA
FD968974       <-- AAACTCTGGGATCCAGATCTCACAACTCGGTCACGTTAA-GGACTTGGCA
FD968851       <-- AAACTCTGGGATCCAGATCTCACAACTCGGTCACGTTAA-GGACTTGGCA
EY901771       <-- AAACTCTGGGATCCAGATCTCACAACTCGGTCACGTTAA-GGACTTGGCA
FD538883       <-- AAACTCTGGGATCCAGATCTCACAACTCGGTCACGTTAA-GGACTTGGCA
FD975470       <-- AAACTCTGGGATCCAGATCTCACAACTCGGTCACGTTAA-GGACTTGGCA
EV540019       <-- AAACTCTGGGATCCAGATCTCACAACTCGGTCACGTTAA-GGACTTGGCA
EV540394       <-- AAACTCTGGGATCCAGATCTCACAACTCGGTCACGTTAA-GGACTTGGCA
FD536937       <-- AAACTCTGGGATCTAGATCTCACAACTCGGTCACGTTAA-GGACTTGGCA
EX755920       --> ..................................................
FD540426       --> ..................................................
EV550694       --> AAACTCTGGGATCCAGATCTCACAACTCGGTCACGT..............
FD973096       --> ..................................................
FD973247       --> ..................................................
FD974106       --> ..................................................
EW732919       --> AAACTCTGGGATCCAGATCTCACA-CTCGGTCACGT..............
EX903721       --> ..................................................
FD979435       --> ..................................................
FD982070       --> ..................................................
FY437635       --> AAACTCTGGGATCCAGATCTCACAACTCGGTCACGTTAA-GGACTTGGCA
FY439357       --> AAACTCTGGGATCCAGATCTCACAACTCGGTCACGTTAA-GGACTTGGCA
FY436942       --> ..................................................
FD542945       --> AAACTCTGGGATCCAGATCTCACAACTCGGTCACGTTAA-G-ACTTGGCA
EY905306       --> AAACTCTGGGATC-AGATCTCACAACTCGGTCACG...............
EV548512       --> AAACTCTGGGATCCAGATCTCACAACTCGGTCACGTTAA-AGACTTGGCA
FY434541       --> AAACTCTGGGATCCAGATCTCACAACTCGGTCACGTTAA-GGACTTGGCA
EV534875       --> AAACTCTGGGATCCAGATCTCACAACTCGGTCACGTTAA-AGACTTGGCA
EV535810       --> AAACTCTGGGATCCAGATCTCACAACTCGGTCACGTTAAAGGACTTGGCA
EW732906       --> AAACTCTGTCATCCAGATCTCACAACTCGGTCACGTTAA-GGACTTGGCA
EV535299       --> AAACTCTGGGATCCAGATCTCACAACTCGGTCACGTTAA-GGACTTGGCA

               851    -    901
UN16493        --> ACAGCCTTTCTTGCCGTGCTTGGTAACGAGAAAGCCAGCAGAGAGATATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545939       <-- ACAGCCTTTCTCGCCGTGCTTGGTAACGAGAAAGCAAGCATAGAGATATT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD968974       <-- ACAGCCTTTCTTGCCGTGCTTGGTAACGAGAAAGCCAGCAGAGAGATATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968851       <-- ACAGCCTTTCTTGCCGTGCTTGGTAACGAGAAAGCCAGCAGAGAGATATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901771       <-- ACAGCCTTTCTTGCCGTGCTTGGTAACGAGAAAGCCAGCAGAGAGATATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538883       <-- ACAGCCTTTCTTGTCGTGCTTGGTAACGAGAAAGCCAGCAGAGAGATATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD975470       <-- ACAGCCTTTCTTGCCGTGCTTGGTAACGAGAAAGCCAGCAGAGAGATATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540019       <-- ACAGCCTTTTTGGCCGTGCTTGGTAACGAGAAAGCCAGCAGAGAGATATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540394       <-- ACAGCCTTTTTGGCCGTGCTTGGTAACGAGAAAGCCAGCAGAGAGATATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536937       <-- ACAGCCTTTCTTGCCGTGCTTGGTAACGAGAAAGCCAGCAGAGAGATATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755920       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540426       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV550694       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD973096       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973247       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974106       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW732919       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX903721       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD979435       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982070       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY437635       --> ACAGCCTTTCTCGCCGTGCTTGGTAACGAGAAAGCAAGCAGAGAGATATT  Raphanus sativus cv GSK3-1
FY439357       --> ACAGCCTTTCTCGCCGTGCTTGGTAACGAGAAAGCAAGCAG.........  Raphanus sativus cv GSK3-1
FY436942       --> ..................................................  Raphanus sativus cv GSK3-1
FD542945       --> -CAGCCTTTCTTGTCGTGCTTGGTA-CGAGAAgcagcaga..........  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905306       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548512       --> ACAGCCTTTCTCGCCGTGCTTGGTAACGAGAAAGCCAGCAGAGAGATAT.  Raphanus raphanistrum subsp. raphanistrum (NY)
FY434541       --> ACAGCCTTTCTCGCCGTGCTTGGTAACGAGAAAGCAAGCAGAGAGATATT  Raphanus sativus cv GSK3-1
EV534875       --> ACAGCCTTTTTGGCCGTGCTTGGTAACGAGAAAGCCAGCAGAGAGATATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535810       --> ACAGCCTTTTTGGCCGTGCTTGGTAACGAGAAAGCCAGCAGAGAGATAT-  Raphanus raphanistrum subsp. raphanistrum (MS)
EW732906       --> ACAGCCTTTCTCGCCGTGCTTGGTAACGAGAAAGCCAGCAGAGAGATATT  Raphanus sativus cv Rat-Tail Radish #3870
EV535299       --> ACAGCCTTTTTGGCCGTGCTTGGTAACGAGAAAGCCAGCAGAGAGATATT  Raphanus raphanistrum subsp. raphanistrum (MS)

               901    -    951
UN16493        --> CAACATCTCAGGAGAGAAGTACGTCACCTTTGATGGCTTAGCAAAAGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545939       <-- CAACATCTCAGGAGAGAAGTACGTCACCTTTGATGGCTTAGCAAGAGCTT
FD968974       <-- CAACATCTCGGGAGAGAAGTACGTCACCTTTGATGGCTTAGCAAAAGCTT
FD968851       <-- CAACATCTCGGGAGAGAAGTACGTCCCCTTTGATGGCTTAGCAAAAGCTT
EY901771       <-- CAACATCTCAGGAGAGAAGTACGTCACCTTTGATGGCTTAGCAAAAGCTT
FD538883       <-- CAACATCTCAGGAGAGAAGTACGTCACCTTTGATGGCTTAGCAAAAGCTT
FD975470       <-- CAACATCTCAGGAGAGAAGTACGTCACCTTTGATGGCTTAGCAAAAGCTT
EV540019       <-- CAGCATCTCAGGAGAGAAGTACGTCACCTTTGATGGCTTAGCAAGAGCTT
EV540394       <-- CAACATCTCAGGAGAGAAGTACGTCACCTTTGATGGCTTAGCAAGAGCTT
FD536937       <-- CAACATCTCAGGAGAGAAGTACGTCACCTTTGATGGCTTAGCAAAAGCTT
EX755920       --> ..................................................
FD540426       --> ..................................................
EV550694       --> ..................................................
FD973096       --> ..................................................
FD973247       --> ..................................................
FD974106       --> ..................................................
EW732919       --> ..................................................
EX903721       --> ..................................................
FD979435       --> ..................................................
FD982070       --> ..................................................
FY437635       --> CAACATCT..........................................
FY439357       --> ..................................................
FY436942       --> ..................................................
FD542945       --> ..................................................
EY905306       --> ..................................................
EV548512       --> ..................................................
FY434541       --> CAACATCTCAGGAGAGAAGTACGTCACCTTTGATGGCTTAGCAAGAGCTT
EV534875       --> CAACATCTCAG-AGAGA-GCACGTCACCTTTGAT................
EV535810       --> CAACATCT..........................................
EW732906       --> CAACATCTC.........................................
EV535299       --> CAGCATCTCAGGAGAGAAGTACGTCACCTTTGATGGCTTAGCAAGAGCTT

               951    -   1001
UN16493        --> GCGCAAAGGCTGGTGGGTTTCCAGAGCCAGAGATTGTTCACTACAACCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545939       <-- GCGCAAAGGCTGGTGGGTTTCCAGAGCCAGAGATTGTTCACTACAACCCT
FD968974       <-- GCGCAAAGGCTGGTGGGTTTCCAGAGCCAGAGATTGTTCACTACAACCCT
FD968851       <-- GCGCAAAGGCTGGTGGGTTTCCAGAGCCAGAGATTGTTCACTACAACCCT
EY901771       <-- GCGCAAAGGCTGGTGGGTTTCCAGAGCCAGAGATTGTTCACTACAACCCT
FD538883       <-- GCGCAAAGGCTGGTGGGTTTCCAGAGCCAGAGATTGTTCACTACAACCCT
FD975470       <-- GCGCAAAGGCTGGTGGGTTTCCAGAGCCAGAGATTGTTCACTACAACCCT
EV540019       <-- GCGCAAAGGCTGGTGGGTTTCCAGAGCCAGAGATTGTTCACTACAACCCT
EV540394       <-- GCGCAAAGGCTGGTGGGTTTCCAGAGCCAGAGATTGTTCACTACAACCCT
FD536937       <-- GCGCAAAGGCTGGTGGGTTTCCAGAGCCAGAGATTGTTCACTACAACCCT
EX755920       --> ..................................................
FD540426       --> ..................................................
EV550694       --> ..................................................
FD973096       --> ..................................................
FD973247       --> ..................................................
FD974106       --> ..................................................
EW732919       --> ..................................................
EX903721       --> ..................................................
FD979435       --> ..................................................
FD982070       --> ..................................................
FY437635       --> ..................................................
FY439357       --> ..................................................
FY436942       --> ..................................................
FD542945       --> ..................................................
EY905306       --> ..................................................
EV548512       --> ..................................................
FY434541       --> GCGCAAAGGCT.......................................
EV534875       --> ..................................................
EV535810       --> ..................................................
EW732906       --> ..................................................
EV535299       --> GCGCAAAGGCTGGTGGGTTTCCAGAGCCAGAGATTGTTCACTACAACCCT

               1001   -   1051
UN16493        --> AAAGAGTTCGACTTTGGGAAGAAGAAAGCCTTCCCTTTCCGTGACCAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545939       <-- AAAGAGTTCGACTTTGGGAAGAAGAAGGCCTTCCCTTTCCGTGACCAGCA
FD968974       <-- AAAGAGTTCGACTTTGGGAAGAAGAAAGCCTTCCCTTTCCGTGACCAGCA
FD968851       <-- AAAGAGTTCGACTTTGGGAAGAAGAAAGCCTTCCCTTTCCGTGACCAGCA
EY901771       <-- AAAGAGTTCGACTTTGGGAAGAAGAAAGCCTTCCCTTTCCGTGACCAGCA
FD538883       <-- AAAGAGTTCGACTTTGGGAAGAAGAAAGCCTTCCCTTTCCGTGACCAGCA
FD975470       <-- AAAGAGTTCGACTTTGGGAAGAAGAAAGCCTTCCCTTTCCGTGACCAGCA
EV540019       <-- AAAGAGTTCGACTTTGGGAAGAAAAAGGCCTTCCCTTTCCGTGACCAGCA
EV540394       <-- AAAGAGTTCGACTTTGGGAAGAAAAAGGCCTTCCCTTTCCGTGACCAGCA
FD536937       <-- AAAGAGTTCGACTTTGGGAAGAAGAAAGCCTTCCCTTTCCGTGACCAGCA
EX755920       --> ..................................................
FD540426       --> ..................................................
EV550694       --> ..................................................
FD973096       --> ..................................................
FD973247       --> ..................................................
FD974106       --> ..................................................
EW732919       --> ..................................................
EX903721       --> ..................................................
FD979435       --> ..................................................
FD982070       --> ..................................................
FY437635       --> ..................................................
FY439357       --> ..................................................
FY436942       --> ..................................................
FD542945       --> ..................................................
EY905306       --> ..................................................
EV548512       --> ..................................................
FY434541       --> ..................................................
EV534875       --> ..................................................
EV535810       --> ..................................................
EW732906       --> ..................................................
EV535299       --> AAAGAGTTCGACTTTGGGAAGAAAAAGGCCTTCCCTTTCCGTGACCAGCA

               1051   -   1101
UN16493        --> TTTCTTTGCCTCGGTGGAGAAAGCAAAGCATGTCTTGGGATGGAAACCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545939       <-- TTTCTTTGCCTCGGTGGAGAAAGCAAAGCATGTCTTGGGATGGACACCGG
FD968974       <-- TTTCTTTGCCTCGGTGGAGAAAGCAAAGCATGTCTTGGGATGGAAACCAG
FD968851       <-- TTTCTTTGCCTCGGTGGAGAAAGCAAAGCATGTCTTGGGATGGAAACCAG
EY901771       <-- TTTCTTTGCCTCGGTGGAGAAAGCAAAGCATGTCTTGGGATGGAAACCAG
FD538883       <-- TTTCTTTGCCTCGGTGGAGAAAGCAAAGCATGTCTTGGGATGGAAACCAG
FD975470       <-- TTTCTTTGCCTCGGTGGAGAAAGCAAAGCATGTCTTGGGATGGAAACCAG
EV540019       <-- TTTCTTTGCCTCGGTGGAGAAAGCAAAGCATGTCTTGGGATGGAAACCAG
EV540394       <-- TTTCTTTGCCTCGGTGGAGAAAGCAAAGCATGTCTTGGGATGGAAACCAG
FD536937       <-- TTTCTTTGCCTCGGTGGAGAAAGCAAAGCATGTCTTGGGATGGAAACCAG
EX755920       --> ..................................................
FD540426       --> ..................................................
EV550694       --> ..................................................
FD973096       --> ..................................................
FD973247       --> ..................................................
FD974106       --> ..................................................
EW732919       --> ..................................................
EX903721       --> ..................................................
FD979435       --> ..................................................
FD982070       --> ..................................................
FY437635       --> ..................................................
FY439357       --> ..................................................
FY436942       --> ..................................................
FD542945       --> ..................................................
EY905306       --> ..................................................
EV548512       --> ..................................................
FY434541       --> ..................................................
EV534875       --> ..................................................
EV535810       --> ..................................................
EW732906       --> ..................................................
EV535299       --> TTTCTTTGCCTCGGTGGAGAAAGCAAAGCATGTCTTGGGATGGAAACCAG

               1101   -   1151
UN16493        --> AGTTCGACTTGGTGGATGGTCTCACTGACTCATACAACCTCGACTTCGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545939       <-- AGTTCGACTTGGTGGATGGTCTCACTGACTCATACAACCTCGACTTCGGT
FD968974       <-- AGTTCGACTTGGTGGATGGTCTCACTGACTCGTACAACCTCGACTTCGGT
FD968851       <-- AGTTCGACTTGGTGGATGGTCTCACTGACTCGTACAACCTCGACTTCGGT
EY901771       <-- AGTTCGACTTGGTGGATGGTCTCACTGACTCATACAACCTCGACTTCGGT
FD538883       <-- AGTTCGACTTGGTGGATGGTCTCACTGACTCATACAACCTCGACTTCGGT
FD975470       <-- AGTTCGACTTGGTGGATGGTCTCACTGACTCATACAACCTCGACTTCGGT
EV540019       <-- AGTTCGACTTGGTGGATGGTCTCACTGACTCATACAACCTCGACTTCGGT
EV540394       <-- AGTTCGACTTGGTGGATGGTCTCACTGACTCATACAACCTCGACTTCGGT
FD536937       <-- AGTTCGACTTGGTGGATGGTCTCACTGACTCATACAACCTCGACTTCGGT
EX755920       --> ..................................................
FD540426       --> ..................................................
EV550694       --> ..................................................
FD973096       --> ..................................................
FD973247       --> ..................................................
FD974106       --> ..................................................
EW732919       --> ..................................................
EX903721       --> ..................................................
FD979435       --> ..................................................
FD982070       --> ..................................................
FY437635       --> ..................................................
FY439357       --> ..................................................
FY436942       --> ..................................................
FD542945       --> ..................................................
EY905306       --> ..................................................
EV548512       --> ..................................................
FY434541       --> ..................................................
EV534875       --> ..................................................
EV535810       --> ..................................................
EW732906       --> ..................................................
EV535299       --> AGTTCGACTTGGTGGATGGTCTCACTGACTCATACAACCTCGACTTCGGT

               1151   -   1201
UN16493        --> CGTGGAACTTTCAGAAAAGAGGCGGATTTCACTACTGACGACATGATTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545939       <-- CGTGGAACTTTCAGAAAAGAGGCGGATTTCACTACTGACGACATGATTCT
FD968974       <-- CGTGGAACTTTCAGAAAAGAGGCGGATTTCACTACTGACGACATGATTCT
FD968851       <-- CGTGGAACTTTCAGAAAAGAGGCGGATTTCACTACTGACGACATGATTCT
EY901771       <-- CGTGGAACTTTCAGAAAAGAGGCGGATTTCACTACTGACGACATGATTCT
FD538883       <-- CGTGGAACTTTCAGAAAAGAGGCGGATTTCACTACTGACGACATGATTTT
FD975470       <-- CGTGGAACTTTCAGAAAAGAGGCGGATTTCACTACTGACGACATGATTCT
EV540019       <-- CGTGGAACTTTCAGAAAAGAGGCGGATTTCACTACTGACGACATGATTTT
EV540394       <-- CGTGGAACTTTCAGAAAAGAGGCGGATTTCACTACTGACGACATGATTTT
FD536937       <-- CGTGGAACTTTCAGAAAAGAGGCGGATTTCACTACTGACGACATGATTCT
EX755920       --> ..................................................
FD540426       --> ..................................................
EV550694       --> ..................................................
FD973096       --> ..................................................
FD973247       --> ..................................................
FD974106       --> ..................................................
EW732919       --> ..................................................
EX903721       --> ..................................................
FD979435       --> ..................................................
FD982070       --> ..................................................
FY437635       --> ..................................................
FY439357       --> ..................................................
FY436942       --> ..................................................
FD542945       --> ..................................................
EY905306       --> ..................................................
EV548512       --> ..................................................
FY434541       --> ..................................................
EV534875       --> ..................................................
EV535810       --> ..................................................
EW732906       --> ..................................................
EV535299       --> CGTGGAACTTTCAGAAAAGAGGCGGATTTCACTACTGACGACATGATTCT

               1201   -   1251
UN16493        --> AAGCAAGAAGCTTGTTCTTCAATAGAAACATTCTTGGCTTGTATATGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545939       <-- AAGCAAGAAACTTGTTCTTCAATAGAAACATTCTTGGCTTGTATATGGTT
FD968974       <-- AAGCAAGAAGCTTGTTCTTCAATAGAAACATTCTTGGCTTGTATATGGTT
FD968851       <-- AAGCAAGAAGCTTGTTCTTCAATAGAAACATTCTTGGCTTGTATATGGTT
EY901771       <-- AAGCAAGAAGCTTGTTCTTCAATAGAAACATTCTTGGCTTGTATATGGTT
FD538883       <-- AAGCAAGAAGCTTGTTCTTCAATAGAAACATTCTTGGCTTGTATATGGTT
FD975470       <-- AAGCAAGAAGCTTGTTCTTCAATAGAAACATTCTTGGCTTGTATATGGTT
EV540019       <-- AAGCAAGAAGCTTGTTCTTCAATAGAAACATTCTTGGCTTGTATATGGTT
EV540394       <-- AAGCAAGAAGCTTGTTCTTCAATAGAAACATTCTTGGCTTGTATATGGTT
FD536937       <-- AAGCAAGAAGCTTGTTCTTCAATAGAAACATTCTTGGCTTGTATATGGTT
EX755920       --> ..................................................
FD540426       --> ..................................................
EV550694       --> ..................................................
FD973096       --> ..................................................
FD973247       --> ..................................................
FD974106       --> ..................................................
EW732919       --> ..................................................
EX903721       --> ..................................................
FD979435       --> ..................................................
FD982070       --> ..................................................
FY437635       --> ..................................................
FY439357       --> ..................................................
FY436942       --> ..................................................
FD542945       --> ..................................................
EY905306       --> ..................................................
EV548512       --> ..................................................
FY434541       --> ..................................................
EV534875       --> ..................................................
EV535810       --> ..................................................
EW732906       --> ..................................................
EV535299       --> AAGCAAGAAGCTTGTTCTTCAATAGAAACATTCTTGGCTTGTATATGGTT

               1251   -   1301
UN16493        --> GTGTGTTTGATCTCAAACTGAAGAAGATTCTCAAGTTTATCGTCGTCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545939       <-- GT----GTGATCTCAAACTGAAGAAGATTCTCAAGTTTAACGTCGTCTCA
FD968974       <-- GTGTGTTTGATCTCAAACTGAAGAAGATTCTCAAGTTTATCGTCGTCTCA
FD968851       <-- GTGTGTTTGATCTCAAACTGAAGAAGATTCTCAAGTTTATCGTCGTCTCA
EY901771       <-- GTGTGTTTGATCTCAAACTGAAGAAGATTCTCAAGTTTATCGTCGTCTCA
FD538883       <-- GTGTGTTTGATCTCAAACTGAAGAAGATTCTCAAGTTTATCGTCGTCTCA
FD975470       <-- GTGTGTTTGATCTCAAACTGAAGAAGATTCTCAAGTTTATCGTCGTCTCA
EV540019       <-- GTGTGTTTGATCTCAAACTGAAGAAGATTCTCAAGTTTATCGTCGTCTCA
EV540394       <-- GTGTGTTTGATCTCAAACTGAAGAAGATTCTCAAGTTTATCGTCGTCTCA
FD536937       <-- GTGTGTTTGATCTCAAACTGAAGAAGATTCTCAAGTTTATCGTCGTCTCA
EX755920       --> ..................................................
FD540426       --> ..................................................
EV550694       --> ..................................................
FD973096       --> ..................................................
FD973247       --> ..................................................
FD974106       --> ..................................................
EW732919       --> ..................................................
EX903721       --> ..................................................
FD979435       --> ..................................................
FD982070       --> ..................................................
FY437635       --> ..................................................
FY439357       --> ..................................................
FY436942       --> ..................................................
FD542945       --> ..................................................
EY905306       --> ..................................................
EV548512       --> ..................................................
FY434541       --> ..................................................
EV534875       --> ..................................................
EV535810       --> ..................................................
EW732906       --> ..................................................
EV535299       --> GT................................................

               1301   -   1351
UN16493        --> AATGTATTTTCTGTATGGATTGTGTTCGAGTTTTTTCTATAAAAAA-GAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545939       <-- AATGTATTTTCTGTATGGATTGTGTTCGAGTTTTTTCTATAAAAAAaagc
FD968974       <-- AATGTATTTTCTGTATGGATTGTGTTCGAGTTTTTTCTATAAAAAA-GAG
FD968851       <-- AATGTATTTTCTGTATGGATTGTGTTCGAGTTTTTTCTATAAAAAA-GAG
EY901771       <-- AATGTATTTTCTGTATGGATTGTGTTCGAGTTTTTTCTATAAAAAA-GAG
FD538883       <-- AATGTATTTTCTGTATGGATTGTGTTCGAGTTTTTTCTATAAAAAA-G..
FD975470       <-- AA-GTATTTTCTGTATGGATTGTGTTCGAGTTTTTTCTATAAAAAA-G..
EV540019       <-- AATGTATTTTCTGTATGGATTGTGTTCGAGTTTTTTCc............
EV540394       <-- AATGTATTTTCTGTATGGATTGTGTTCGAGTTTTTTCTATAAAAAAAGAG
FD536937       <-- AATGTATTTTCTGTATGGATTGTGTTCGAGTTTTTTCTATAAAAAA-GAG
EX755920       --> ..................................................
FD540426       --> ..................................................
EV550694       --> ..................................................
FD973096       --> ..................................................
FD973247       --> ..................................................
FD974106       --> ..................................................
EW732919       --> ..................................................
EX903721       --> ..................................................
FD979435       --> ..................................................
FD982070       --> ..................................................
FY437635       --> ..................................................
FY439357       --> ..................................................
FY436942       --> ..................................................
FD542945       --> ..................................................
EY905306       --> ..................................................
EV548512       --> ..................................................
FY434541       --> ..................................................
EV534875       --> ..................................................
EV535810       --> ..................................................
EW732906       --> ..................................................
EV535299       --> ..................................................

               1351   -   1401
UN16493        --> GCGCGCGGTCTGAATATTTTTTTCTACAAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545939       <-- ................................
FD968974       <-- GCGCGCGGTCTGAATATTTTTTTCTgc.....
FD968851       <-- GCGCGCGGTCTGAATATTTTTTTCTgc.....
EY901771       <-- GCGCGCGGTCTGAATATTTT............
FD538883       <-- ................................
FD975470       <-- ................................
EV540019       <-- ................................
EV540394       <-- GCGCGCGGTCTGAATATTTTTTTCTACAAACC
FD536937       <-- GCGCACGGTCTGAATATTTTTTTCTAC.....
EX755920       --> ................................
FD540426       --> ................................
EV550694       --> ................................
FD973096       --> ................................
FD973247       --> ................................
FD974106       --> ................................
EW732919       --> ................................
EX903721       --> ................................
FD979435       --> ................................
FD982070       --> ................................
FY437635       --> ................................
FY439357       --> ................................
FY436942       --> ................................
FD542945       --> ................................
EY905306       --> ................................
EV548512       --> ................................
FY434541       --> ................................
EV534875       --> ................................
EV535810       --> ................................
EW732906       --> ................................
EV535299       --> ................................