Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN16541

               1      -     51
UN16541        --> GGGCAAAATTGGCCGCTTCTGAGTTTAGAACCCAAAAAGGATAATATAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530784       <-- ..................................................
EW736491       <-- ..................................................
EY895613       <-- ..................................................
EX767913       <-- ..................................................
EV526261       --> GGGCAAAATTGGCCGCTTCTGAGTTTAGAACCCAAAAAGGATAATATAAA
EY899951       --> ..................................................
EX763885       --> ..................................................
EW731425       --> ..................................................

               51     -    101
UN16541        --> AAGGGATTTAAACCTAAAGCCCCGAGAAACAAACCAAAACGGGGCCGCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530784       <-- ..................................................
EW736491       <-- ..................................................
EY895613       <-- ..................................................
EX767913       <-- ..................................................
EV526261       --> AAGGGATTTAAACCTAAAGCCCCGAGAAACAAACCAAAACGGGGCCGCCT
EY899951       --> ...........................ggaAAACCAAAACGGGGCCGCCT
EX763885       --> .................................ggAAAACGGGGCCGCCT
EW731425       --> ..................................................

               101    -    151
UN16541        --> GAAAGAGAGCAATAATGGCGAAAGGCGACGATGCTTTGGCGAGGAAGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530784       <-- ..................................................
EW736491       <-- ..................................................
EY895613       <-- ..................................................
EX767913       <-- ..................................................
EV526261       --> GAAAGAGAGCAATAATGGCGAAAGGCGACGATGCTTTGGCGAGGAAGAAG
EY899951       --> GAAAGAGAGCAATAATGGCGAAAGGCGACGATGCTTTGGCGAGGAAGAAG
EX763885       --> GAAAGAGAGCAATAATGGCGAAAGGCGACGATGCTTTGGCGAGGAAGAAT
EW731425       --> ..................................................

               151    -    201
UN16541        --> AACAAATCCAACCGGAAGAAGATGAATCGCAAGAACGATTCCGCCGCCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530784       <-- ..................................................
EW736491       <-- ..................................................
EY895613       <-- ..................................................
EX767913       <-- ..................................................
EV526261       --> AACAAATCCAACCGGAAGAAGATGAATCGCAAGAACGATTCCGCCGCCGT
EY899951       --> AACAAATCCAACCGGAAGAAGATGAATCGCAAGAACGATTCCGCCGCCGT
EX763885       --> AACAAATCCAACCGGAAGAAGATGAATCGCAAGAACGATTCCGCCGCCGT
EW731425       --> ..................................................

               201    -    251
UN16541        --> ATCCTCTCGCATCGCCGCTATCATCGCCGCCAAGAAGCGCCGCCAGACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530784       <-- ..................................................
EW736491       <-- ..................................................
EY895613       <-- ..................................................
EX767913       <-- ..................................................
EV526261       --> ATCCTCTCGCATCGCCGCTATCATCGCCGCCAAGAAGCGCCGCCAGACTG
EY899951       --> ATCCTCTCGCATCGCCGCTATCATCGCCGCCAAGAAGCGCCGCCAGACTG
EX763885       --> ATCCTCTCGCATCGCCGCTATCATCGCCGCCAAGAAGCGCCGCCAGACTG
EW731425       --> ..................................................

               251    -    301
UN16541        --> GCAAACGCAGCATGTGTCAGGGAATGTGTTTTAGCCTTCCTACACCAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530784       <-- ..................................................
EW736491       <-- ..................................................
EY895613       <-- ..................................................
EX767913       <-- ..................................................
EV526261       --> GCAAACGCAGCATGTGTCAGGGAATGTGTTTTAGCCTTCCTACACCAGAA
EY899951       --> GCAAACGCAGCATGTGTCAGGGAATGTGTTTTAGCCTTCCTACACCAGAA
EX763885       --> GCAAACGCAGCATGTGTCAGGGAATGTGTTTTAGCCTTCCTACACCAGAA
EW731425       --> ..................................................

               301    -    351
UN16541        --> GATCCCTTCAATGAGAAGCTGGGTAAAGTGAGCATTGTCAAAGAGAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530784       <-- ..................................................
EW736491       <-- ..................................................
EY895613       <-- ..................................................
EX767913       <-- ..................................................
EV526261       --> GATCCCTTCAATGAGAAGCTGGGTAAAGTGAGCATTGTCAAAGAGAAGAA
EY899951       --> GATCCCTTCAATGAGAAGCTGGGTAAAGTGAGCATTGTCAAAGAGAAGAA
EX763885       --> GATCCCTTCAATGAGAAGCTGGGTAAAGTGAGCATTGTCAAAGAGAAGAA
EW731425       --> ..................................................

               351    -    401
UN16541        --> GAAGAAGAAAAAGGTCAAGTCTAGAGATGCTCTTTCAGTGAATAAATCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530784       <-- ..................................................
EW736491       <-- ..................................................
EY895613       <-- ..................................................
EX767913       <-- ..................................................
EV526261       --> GAAGAAGAAAAAGGTCAAGTCTAGAGATGCTCTTTCAGTGAATAAATCTT
EY899951       --> GAAGAAGAAAAAGGTCAAGTCTAGAGATGCTCTTTCAGTGAATAAATCTT
EX763885       --> GAAGAAGAAAAAGGTCAAGTCTAGAGATGCTCTTTCAGTGAATAAATCTT
EW731425       --> ..................................................

               401    -    451
UN16541        --> CTCTTAAGAAACCATCTCGAGACGGCGATGAGAAGAAGACGGAGAAGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530784       <-- ..................................................
EW736491       <-- ..................................................
EY895613       <-- ..................................................
EX767913       <-- ..................................................
EV526261       --> CTCTTAAGAAACCATCTCGAGACGGCGATGAGAAGAAGACGGAGAAGATG
EY899951       --> CTCTTAAGAAACCATCTCGAGACGGCGATGAGAAGAAGACGGAGAAGATG
EX763885       --> CTCTTAAGAAACCATCTCGAGACGGTGATGAGAAGAAGACAGAGAAGACG
EW731425       --> ..................................................

               451    -    501
UN16541        --> AGGGTGATTCATGGTCCACGTAAGTTGGTGATGCTCTGCCTGACCGAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530784       <-- ..................................................
EW736491       <-- ..................................................
EY895613       <-- ..................................................
EX767913       <-- ..................................................
EV526261       --> AGGGTGATTCATGGTCCACGTAAGTTGGTGATGCTCTGCCTGACCGAAAT
EY899951       --> AGGGTGATTCATGGTCCACGTAAGTTGGTGATGCTCTGCCTGACCGAAAT
EX763885       --> AGGGTGGTTCATGGTCCACGTAAGTTGGTTATGCTGTGCCTGACCGAAAT
EW731425       --> ..................................................

               501    -    551
UN16541        --> CGAGAGCTCCTTTCATCACCTTGAGAAGCCTTTGTTCACTAGCACTTGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530784       <-- ...................................TCACTAGCACTTGGG
EW736491       <-- ..................................................
EY895613       <-- ..................................................
EX767913       <-- ..................................................
EV526261       --> CGAGAGCTCCTTTCATCACCTTGAGAAGCCTTTGTTCACTAGCACTTGGG
EY899951       --> CGAGAGCTCCTTTCATCACCTTGAGAAGCCTTTGTTCACTAGCACTTGGG
EX763885       --> AGAGAGCACGTTTCATCAGCTTGAGAAGCCTTTGTTCACTAGCACTTGGG
EW731425       --> ......CTCCTTTCATAACCTTGAGAAGCCTTTGTTCACTAGCACTTGGG

               551    -    601
UN16541        --> GGAATGAGTTCTGGAAATCTTTTCATTCTGGTAAAGATGTTGTTGAGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530784       <-- GGAATGAGTTCTGGAAATCTTTTCATTCTGGTAAAGATGTTGTTGAGACT
EW736491       <-- ...........TGGAAATCTTTTCATTCTGGTAAAGATGTTGTTGAGACT
EY895613       <-- ...................................aagatgtgTGAGACT
EX767913       <-- ..................................................
EV526261       --> GGAATGAGTTCTGGAAATCTTTTCATTCTGGTAAAGATGTTGTTGAGACT
EY899951       --> GGAATGAGTTCTGGAAATCTTTTCATTCTGGTAAAGATGTTGTTGAGACT
EX763885       --> GGAATGAGTTCTGGAAGTCTTTTCATTCTGGTAAAGATGTTGTTGAGA-T
EW731425       --> GAAATGAGTTCTGGAAATCTTTTCATTCTGGTAAAGATGTTGTTGAGACT

               601    -    651
UN16541        --> AGTGTGACATCTTCCTCCCTTGAACAAATCGCATGGATCGTTTCGACTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530784       <-- AGTGTGACATCTTCCTCCCTTGAACAAATCGCATGGATCGTTTCGACTGC
EW736491       <-- AGTGTGACATCTTCCTCCCTTGAACAAATCGCATGGATCGTTTCGACTGC
EY895613       <-- AGTGTGACATCTTCCTC--CTG-AC-AATCGCAT-GATCG-TTCGACTGC
EX767913       <-- ...........................ATCGCATGGATCGTTTCGACTGC
EV526261       --> AGTGTGACATCTTCCTCCCTTGAACAAATCGCATGGATCGTTTCGACTGC
EY899951       --> AGTGTGACATCTTCCTCCCTTGAACAAATCGCATGGATCGTTTCGACTGC
EX763885       --> AGTGGGACATCTTCCTCCCTTGAACAAATCGCATGGATCGTTTCGACTGC
EW731425       --> AGTGTGACATCTTCCTCCCTTGAACAAATCGCATGGATCGTTTCGACTGC

               651    -    701
UN16541        --> CACTGATGCTATTTCTATGCGAGAGAAATACGAGGAGAGCCTACCACTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530784       <-- CTCTGATGCTATTTCTATGCGAGAGAAATACGAGGAGAGCCTACCACTAA
EW736491       <-- CACTGATGCTATTTCTATGCGAGAGAAAGACGAGGAGAGCCT---ACTAA
EY895613       <-- CACTGATGCTATTTCTATGCGAGAGAA-TACGAGGAGAGC-TACCACTAA
EX767913       <-- CACTGATGCTATTTCTATGCGAGAGAAATACGAGGAGAGCCTACCACTAA
EV526261       --> CTCTGATGCTATTTCTATGCGAGAGAAATACGAGGAGAGCCTACCACTAA
EY899951       --> CACTGATGCTATTTCTATGCGAGAGAAATACGAGGAGAGCCTACCACTAA
EX763885       --> CACTGATGCTATTTCTATGCGAGAGAAATACGAGGAGAGCCTACCACTAA
EW731425       --> CACTGATGCTATTTCTATGCGAGAGAAAGACGAGGAGAGCCTAC---TAA

               701    -    751
UN16541        --> GCAGTAGTCCTTTTCTCTTATATCTCGTACCATCTCAGTCCAAAGCTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530784       <-- GCAATAGCCCTTTTCTCTTATATCTCGTACCATCTCAGTCCAAAGCTTCT  Raphanus raphanistrum subsp. maritimus
EW736491       <-- GCAGTAGTCCTTTTCTCTTATATCTCGTACCATCTCAGTCCAAAGCTTCA  Raphanus sativus cv Rat-Tail Radish #3870
EY895613       <-- GCAATAGCCCTTTTCTCTTATATCTCGTACCATCTCAGTCCAAAGCTTCT  Raphanus raphanistrum subsp. maritimus
EX767913       <-- GCAGTAGTCTTTTTCTCTTATATCTCGTACCATCTCAGTCCAAAGCTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV526261       --> GCAATAGCCCTTTTCTCTTATATCTCGTACCATCTC..............  Raphanus raphanistrum subsp. maritimus
EY899951       --> GCAATAGCCCTTTTCTCTTATATCTCGTACCATCTCAGTCCAAAGCTTCT  Raphanus raphanistrum subsp. maritimus
EX763885       --> GCAGTAGTCTTTTTCTCTTATATCTCGTACCATCTCAGTCCAAAGCTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW731425       --> GCAGTAGTCCTTTTCTCTTATATCTCGTACCATCTCAGTCCAAAGCTTCA  Raphanus sativus cv Rat-Tail Radish #3870

               751    -    801
UN16541        --> GAGGTTCGATCGGTTTGCAAGGCGCTGAAACGTCTTGGAGTTCATGCAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530784       <-- CAGGTTCGATCGGTTTGCAAGGCGCTGAAACGTCTTGGAGTTCATGCAGT  Raphanus raphanistrum subsp. maritimus
EW736491       <-- GAGGTTCGATCGGTTTGCAAGGCGCTGAAACGTCTTGGAGTTCATGCAGT  Raphanus sativus cv Rat-Tail Radish #3870
EY895613       <-- CAGGTTCGATCGGTTTGCAAGGCGCTGAAACGTCTTGGAGTTCATGCAGT  Raphanus raphanistrum subsp. maritimus
EX767913       <-- GAGGTTCGATCGGTTTGCAAGGCGCTGAAACGTCTTGGAGTTCATGCAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV526261       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY899951       --> CAGGTTCGATCGGTTTGCA-GGCGCTGAAACGTCTTGGAGTTCATGCAGT  Raphanus raphanistrum subsp. maritimus
EX763885       --> GAGGTTCGATCGGTTTGCAAG-CGCTGAAACGTCTTGGAGTTCATGCAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW731425       --> GAGGTTCGATCGGTTTGCAAGGCGCTGAAACGTCTTGGAGTTCATGCAGT  Raphanus sativus cv Rat-Tail Radish #3870

               801    -    851
UN16541        --> GAGCTTACACAATGG-AGCCGAAATAGATCATCAGATTTCTGGATTGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530784       <-- GAGCTTACACAATGG-AGCCGAAATAGATCATCAGATTTCTGGATTGAAA
EW736491       <-- GAGCTTACACAATGG-AGCCGAAATAGATCATCAGATTTCTGGATTGAAA
EY895613       <-- GAGCTTACACAATGG-AGCCGAAATAGATCATCAGATTTCTGGATTGAAA
EX767913       <-- GAGCTTACACAATGG-AGCCGAAATAGATCATCAGATTTCTGGATTGAAA
EV526261       --> ..................................................
EY899951       --> GAGCTTACACAATGGGAGCCGAAATAGATCAT..................
EX763885       --> GAGCTTACACAATGG-AGCCGAA-TAGATCATCAGATTTCTGGATTGAAA
EW731425       --> GAGCTTACACAATGG-AGCCGAAATAGATCATCAGATTTCTGGATTGAAA

               851    -    901
UN16541        --> AGCTTAGAACCTGAATTTATAGTTTCCACACCTGAGCGACTTTTGGAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530784       <-- AGCTTAGAACCTGAATTTATAGTTTCCACACCTGAGCGACTTTTGGAGAT
EW736491       <-- AGCTTAGAACCTGAATTTATAGTTTCCACACCTGAGCGACTTTTGGAGAT
EY895613       <-- AGCTTAGAACCTGAATTTATAGTTTCCACACCTGAGCGACTTTTGGAGAT
EX767913       <-- AGCTTAGAACCTGAATTTATAGTTTCCACACCTGAGCGACTTTTGGAGAT
EV526261       --> ..................................................
EY899951       --> ..................................................
EX763885       --> -GCTTAGAACCTGAATT-ATAGTTT.........................
EW731425       --> AGCTTAGAACCTGAATTTATAGTTTCCACACCTGAGCGACTTTTGGAGAT

               901    -    951
UN16541        --> TGTTGCCCTCAAAGGAGTTGATATATCGGGGGTTTCGTTACTGGTCATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530784       <-- TGTTGCCCTCAAAGGAGTTGATATATCGGGGGTTTCGTTACTGGTCATTG
EW736491       <-- TGTTGCCCTCAAAGGAGTTGATATATCGGGGGTTTCGTTACTGGTCATTG
EY895613       <-- TGTTGCCCTCAAAGGAGTTGATATATCGGGGGTTTCGTTACTGGTCATTG
EX767913       <-- TGTTGCCCTCAAAGGAGTTGATATATCGGGGGTTTCGTTACTGGTCATTG
EV526261       --> ..................................................
EY899951       --> ..................................................
EX763885       --> ..................................................
EW731425       --> TGTTGCCCTCAAAGGAGTTGATATATCGGGGGTTTCGTTACTGGTCATTG

               951    -   1001
UN16541        --> ATGAACTAGGTTCACTTTGCGCTAGTGGTTATCTAGATGCGGTGAAATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530784       <-- ATGAACTAGGTTCACTTTGCGCTAGTGGTTATCTAGATGCGGTGAAATCC
EW736491       <-- ATGAACTAGGTTCACTTTGCGCTAGTGGTTATCTAGATGCGGTGAAATCC
EY895613       <-- ATGAACTAGGTTCACTTTGCGCTAGTGGTTATCTAGATGCGGTGAAATCC
EX767913       <-- ATGAACTAGGTTCACTTTGCGCTAGTGGTTATCTAGATGCGGTGAAATCC
EV526261       --> ..................................................
EY899951       --> ..................................................
EX763885       --> ..................................................
EW731425       --> ATGAACTAGGTTCACTTTGCGCTAGTGGTTATCTAGATGCGGTGAAATCC

               1001   -   1051
UN16541        --> ATTAAGAAGGCCATCACCAGCGAGCACCGATCAGTAGTTTTCAACGACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530784       <-- ATTAAGAAGGCCATCACCAGCGAGCACCGATCAGTAGTTTTCAACGACAG
EW736491       <-- ATTAAGAAGGCCATCACCAGCGAGCACCGATCAGTAGTTTTCAACGACAG
EY895613       <-- ATTAAGAAGGCCATCACCAGCGAGCACCGATCAGTAGTTTTCAACGACAG
EX767913       <-- ATTAAGAAGGCCATCACCAGCGAGCACCGATCAGTAGTTTTCAACGACAG
EV526261       --> ..................................................
EY899951       --> ..................................................
EX763885       --> ..................................................
EW731425       --> ATTAAGAAGGCCATCACCAGCGAGCACCGATCAGTAGTTTTCAACGACAG

               1051   -   1101
UN16541        --> TGCTTCCTGTACTCCAGCCGTCCTGAGTCTTTTGGGGAGATTCTGACAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530784       <-- TGCTTCCTGTACTCCAGCCGTCCTGAGTCTTTTGGGGAGATTCTGACAAG
EW736491       <-- TGCTTCCTGTACTCCAGCCGTCCTGAGTCTTTTGGGGAGATTCTGACAAG
EY895613       <-- TGCTTCCTGTACTCCGGCCGTCCTGAGTCTTTTGGGGAGATTCTGACAAG
EX767913       <-- TGCTTCCTGTACTCCAGCCGTCCTGAGTCTTTTGGGGAGATTCTGACAAG
EV526261       --> ..................................................
EY899951       --> ..................................................
EX763885       --> ..................................................
EW731425       --> TGCTTCCTGTACTCCAGCCGTCCTGAGTCTTTTGGGGAGATTCTGACAAG

               1101   -   1151
UN16541        --> TATTGCTAAAGAGAGTGTTTACGGTGTGCTACACAGCTTTGTAACAGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530784       <-- TATTGCTAAAGAGAGTGTTTACGGTGTGCTACACAGCTTTGTAACAGAAA
EW736491       <-- TATTGCTAAAGAGAGTGTTTACGGTGTGCTACACAGCTTTGTAACAGAAA
EY895613       <-- TATTGCTAAAGAGAGTGTTTACGGTGTGCTACACAGCTTTGTAACAGAAA
EX767913       <-- TATTGCTAAAGAGAGTGTTTACGGTGTGCTACACAGGTTTGTAACAGAAA
EV526261       --> ..................................................
EY899951       --> ..................................................
EX763885       --> ..................................................
EW731425       --> TATTGCTAAAGAGAGTGTTTACGGTGTGCTACACAGCTTTGTAACAGAAA

               1151   -   1201
UN16541        --> AAGAGGAGGATGTGTTTTGTCTTGCTGGTTCATTGGTGAATGTTCTGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530784       <-- AAGAGGAGGATGTGTTTTGTCTTGCTGGTTCATTGGTGAATGTTCTAGAG
EW736491       <-- AAGAGGAGGATGTGTTTTGTCTTGCTGGTTCATTGGTGAATGTTCTGGAG
EY895613       <-- AAGAGGAGGATGTGTTTTGTCTTGCTGGTTCATTGGTGAATGTTCTAGAG
EX767913       <-- AAGAGGAGGATGTGTTTTGTCTTGCTTGTTCATTGGTGAATGTTCTGGAG
EV526261       --> ..................................................
EY899951       --> ..................................................
EX763885       --> ..................................................
EW731425       --> AAGAGGAGGATGTGTTTTGTCTTGCTGGTTCATTGGTGAATGTTCTGGAG

               1201   -   1251
UN16541        --> GATTGTGGCCAGGACGTGCCTGGCTGTTGGAGGAATATGTCTAATTGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530784       <-- AATTGTGGCCAGGACGTGCCTGGCTGTTGGAGGAATATGTCTGATTGATC
EW736491       <-- GATTG-GGCCAGGACGTGCCTGGCTGTTGGAGTAATATGTCTAATTGATC
EY895613       <-- AATTGTGGCCAGGACGTGCCTGGCTGTTGGAGGAATATGTCTGATTGATC
EX767913       <-- GATTGTGGCCGGGACGTGCCTGGCTGTTGGAGGAATATGTCTAATTGATC
EV526261       --> ..................................................
EY899951       --> ..................................................
EX763885       --> ..................................................
EW731425       --> GATTG-GGCCAGGACGTGCCTGGCTGTTGGAGTAATATGTCTAATTGATC

               1251   -   1301
UN16541        --> AAACTTGTTGTTTCTCAATACTC-TTTTAAGTTACAATTTTAGTTTTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530784       <-- AAACTTGTCGTGTCTCAATACTC-TTTTAAGTTGCAATTTTAGTTTTTag
EW736491       <-- AAACTTGTTGTTTCTCAATACTCCTTTTAAGTTACAACTTTAGTTTTTGC
EY895613       <-- AAACTTGTCGTGTCTCAATACTC-TTTTAAGTTGCAATTTTAGTTTTTAG
EX767913       <-- AAACTTGTTGTTTCTCAATACTC-TTTTAAGTTACAAGTTTAGTTTTTGC
EV526261       --> ..................................................
EY899951       --> ..................................................
EX763885       --> ..................................................
EW731425       --> AAACTTGTTGTTTCTCAATACTCCTTTTAAGTTACAACTTTAGTTTTTGC

               1301   -   1351
UN16541        --> TTACTGAAAGTTTTAGCTGCAGGGAATTTTGGTTAAAGTGATATAAATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530784       <-- ttaccg............................................
EW736491       <-- TTACTGAAAGTTTTAGCTGCAGGGAATTTTGGTTAAAGTGATATAAATTT
EY895613       <-- TTACTGAAAGTTTTAGCTGCAGGGAACTTTGGTTAAAGTGATATAAATTT
EX767913       <-- TTACTGAAAGTTTTAGCTGCAGGGAATTTTGGTTAAGGTG..........
EV526261       --> ..................................................
EY899951       --> ..................................................
EX763885       --> ..................................................
EW731425       --> TTACTGAAAGTTTTAGCT................................

               1351   -   1401
UN16541        --> TGAGTAATTGATGTTTCTTTTTTTCCTTCTGATCATTTTCTTGTCCGGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530784       <-- ..................................................
EW736491       <-- TAAGTA-TTGATGTTTCTTT..............................
EY895613       <-- TGAGTAATTGATGTTTCTTTTTTTCCTTCTGATCATTTTCTTGTCCGGTC
EX767913       <-- ..................................................
EV526261       --> ..................................................
EY899951       --> ..................................................
EX763885       --> ..................................................
EW731425       --> ..................................................

               1401   -   1451
UN16541        --> CAATGATATGTTTAAAGTTGTTTGATTTTGAGTTCGCATCAAGTTCAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530784       <-- ..................................................
EW736491       <-- ..................................................
EY895613       <-- CAATGATATGTTTAAAGTTGTTTGATTTTGAGTTCGCATCAAGTTCAATA
EX767913       <-- ..................................................
EV526261       --> ..................................................
EY899951       --> ..................................................
EX763885       --> ..................................................
EW731425       --> ..................................................

               1451   -   1501
UN16541        --> AGAGACACTCGAGTCTTAATCAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~
EV530784       <-- .........................
EW736491       <-- .........................
EY895613       <-- AGAGACACTCGAGTCTTAATCAGCC
EX767913       <-- .........................
EV526261       --> .........................
EY899951       --> .........................
EX763885       --> .........................
EW731425       --> .........................