RadishBase

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Alignment for radish unigene UN16600

               1      -     51
UN16600        --> GTAAAGATTTTGTGAAACAAGTGCCCATTTCATTTTTACTCTGTCAAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY440755       <-- GTAAAGATTTTGTGAAACAAGTGCCCATTTCATTTTTACTCTGTCAAAAA
EX757869       <-- ..................................................
EX763476       <-- ..................................................
FD579456       <-- ..................................................
EX756850       <-- ..................................................
FD978597       <-- ..................................................
EX889140       <-- ..................................................
EW723473       <-- ..................................................
EY932640       <-- ..................................................
FD988688       <-- ..................................................
FD541812       <-- ..................................................
EV525131       <-- ..................................................
FD939139       <-- ..................................................
EX762990       <-- ..................................................
EV537217       <-- ..................................................
FD973863       <-- ..................................................
FD579677       <-- ..................................................
FD949465       <-- ..................................................
FD940450       <-- ..................................................
EY900201       <-- ..................................................
EX761341       --> .........cTGTGAAACAAGTGCCCATTTCATTTTTACTCTGTCAAAAA
EV541500       --> ...........GTGAAACAAGTGCCAATTTCATTTTTACTCTGTCAAAAA
EY895801       --> ...........GTGAAACAAGTGCCCATTTCATTTTTACTCTGTCAAAAA
EY902256       --> ...........GTGAAACAAGTGCCCATTTCATTTTTACTCTGTCAAAAA
EX892934       --> ...........gcGAAACAAGTGCCCATTTCATTTTTACTCTGTCAAAAA
FD984555       --> ...........gcGAAACAAGTGCCCATTTCATTTTTACTCTGTCAAAAA
EX767146       --> ............gaAAACAAGTGCCCATTTCATTTTTACTCTGTCAAAAA
EW728080       --> .............gtAACAAGTGCCCATTTCATTTTTACTCTGTCAAGAA
EV529953       --> ....................GTGCCCATTTCATTTTTACTCTGTCAAAAA
EX767545       --> ..................................................
FD538020       --> ..................................................

               51     -    101
UN16600        --> CTTATCCTTACACCCATCTAGAATTTTGACTTTTGATAAGAGTTTACATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY440755       <-- CTTATCCTTACACCCATCTAGAATTTTGAATTTTGATAAGAGTTTACATG
EX757869       <-- ...................tagATTTTGACTTTTGATGTGAGTT-ACATG
EX763476       <-- ............................gacTTTGATAAGAGTTTACATG
FD579456       <-- ..................................................
EX756850       <-- ..................................................
FD978597       <-- ..................................................
EX889140       <-- ..................................................
EW723473       <-- ..................................................
EY932640       <-- ..................................................
FD988688       <-- ..................................................
FD541812       <-- ..................................................
EV525131       <-- ..................................................
FD939139       <-- ..................................................
EX762990       <-- ..................................................
EV537217       <-- ..................................................
FD973863       <-- ..................................................
FD579677       <-- ..................................................
FD949465       <-- ..................................................
FD940450       <-- ..................................................
EY900201       <-- ..................................................
EX761341       --> CTTATCCTTACACCCATCTAGAATTTTGACTTTTGATGTGAGTTTACATG
EV541500       --> CTTATCCTTACACCCATCTAGAATTTTGACTTTTGATAAGAGTTTACATG
EY895801       --> CTTATCCTTACACCCATCTAGAATTTTGACTTTTGATAAGAGTTTACATG
EY902256       --> CTTATCCTTACACCCATCTAGAATTTTGACTTTTGATAAGAGTTTACATG
EX892934       --> CTTATCCTTACACTCATCTAGAATTTTGACTTTTGATAAGAGTTTACATG
FD984555       --> CTTATCCCTACACCCATCTAGAATTTTGACTTTTGATAAGAGTTTACATG
EX767146       --> CTTATCCTTACAACCATCTAGAATTTTGACTTTTGATAAGAGTTTACATG
EW728080       --> CTTATCCTTACACCCATCTAGAATTTTGACTTTTGATAAGAGTTTACATG
EV529953       --> CTTATCCTTACACCCATCTAGAATTTTGACTTTTGATAAGAGTTTACATG
EX767545       --> ...gTCCTTACACCCATCTAGAATTTTGACTTTTGATAAGAGTTTACATG
FD538020       --> .....CCTTACACCCATCTAGAATTTTGACTTTTGATAAGAGTTTACATG

               101    -    151
UN16600        --> AGAAGAGGTTCTAAGAGCTCAGAACTACTAAAAGCCCTGTCGCCAATCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY440755       <-- AGAAGAGGTTCTAAGAGCTCAGAACTACTAAAAGCCCTATCGCCAATCAG
EX757869       <-- AGAAGAGGTTCTAAGAGCTCAGAACTACTAAAAGCCCTGTCGCCAATCAG
EX763476       <-- AGAAGAGGTTCTAAGAGCTCAGAACTACTAAAAGCCCTGTCGCCAATCAG
FD579456       <-- ..................................................
EX756850       <-- ..................................................
FD978597       <-- ..................................................
EX889140       <-- ..................................................
EW723473       <-- ..................................................
EY932640       <-- ..................................................
FD988688       <-- ..................................................
FD541812       <-- ..................................................
EV525131       <-- ..................................................
FD939139       <-- ..................................................
EX762990       <-- ..................................................
EV537217       <-- ..................................................
FD973863       <-- ..................................................
FD579677       <-- ..................................................
FD949465       <-- ..................................................
FD940450       <-- ..................................................
EY900201       <-- ..................................................
EX761341       --> AGAAGAGGTTCTAAGAGCTCAGAACTACTAAAAGCCCTGTCGCCAATCAG
EV541500       --> AGAAGAGGTTCTAAGAGCTCAGAACTACTAAAAGCCCTGTCGTCAATCAT
EY895801       --> AGAAGAGGTTCTAAGAGCTCAGAACTACTAAAAGCCCTGTCGCCAATCAG
EY902256       --> AGAAGAGGTTCTAAGAGCTCAGAACTACTAAAAGCCCTATCGCCAATCAG
EX892934       --> AGAAGAGGTTCTAAGAGCTCAGAACTACTAAAAGCCCTGTCGCCAATCAG
FD984555       --> GGAAGAGGTTCTAAGAGCTCAGAACTACTAAAAGCCCTGTCGCCAATCAG
EX767146       --> AGAAGAGGTTCTAAGAGCTCAGAACTACTAAAAGCCCTGTCGCCAATCAG
EW728080       --> AGAAGAGGTTCTAAGAGCTCAGAACTACTAAAAGCCCTGTCGCCAATCAG
EV529953       --> AGAAGAGGTTCTAAGAGCTCAGAACTACTAAAAGCCCTGTCGCCAATCAG
EX767545       --> AGAAGAGGTTCTAAGAGCTCAGAACTACTAAAAGCCCTGTCGCCAATCAG
FD538020       --> AGAAGAGGTTCTAAGAGCTCAGAACTACTAAAAGCCCTGTCGCCAATCAT

               151    -    201
UN16600        --> AATGGGAACAAAGTCAGATTGGGAGCTAGTGCTGTATTCATTTTGCAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY440755       <-- AATGGGAACAAAGTCAGATTGGGAGGTAGTGCTGTGTTCATTTTGCAGTT
EX757869       <-- AATGGGAACAAAGTCAGATTGGGAGGTAGTGCTGTATTCATTTTGCAGTT
EX763476       <-- AATGGGAACAAAGTCAGATTGGGAGCTAGTGCTGTATTCATTTTGCAGTT
FD579456       <-- ..................................................
EX756850       <-- ..................................................
FD978597       <-- ..................................................
EX889140       <-- ..................................................
EW723473       <-- ..................................................
EY932640       <-- ..................................................
FD988688       <-- ..................................................
FD541812       <-- ..................................................
EV525131       <-- ..................................................
FD939139       <-- ..................................................
EX762990       <-- ..................................................
EV537217       <-- ..................................................
FD973863       <-- ..................................................
FD579677       <-- ..................................................
FD949465       <-- ..................................................
FD940450       <-- ..................................................
EY900201       <-- ..................................................
EX761341       --> AATGGGAACAAAGTCAGATTGGGAGGTAGTGCTGTATTCATTTTGCAGTT
EV541500       --> AATGGGAACAAAGTCAGATTGGGAGCTAGTGCTGTGTTCATTTTGCAGTT
EY895801       --> AATGGGAACAAAGTCAGATTGGGAGCTAGTGCTGTATTCATTTTGCAGTT
EY902256       --> AATGGGAACAAAGTCAGATTGGGAGCTAGTGCTGTGTTCATTTTGCAGTT
EX892934       --> AATGGGAACAAAGTCAGATTGGGAGCTAGTGCTGTATTCATTTTGCAGTT
FD984555       --> AATGGGAACAAAGTCAGATTGGGAGCTAGTGCTGTATTCATTTTGCAGTT
EX767146       --> AATGGGAACAAAGTCAGATTGGGAGGTAGTGCTGTATTCATTTTGCAGTT
EW728080       --> AATGGGAACAAAGTCAGATTGGGAGCTAGTGCTGTATTCATTTTGCAGTT
EV529953       --> AATGGGAACAAAGTCAGATTGGGAGCTAGTGCTGTATTCATTTTGCAGTT
EX767545       --> AATGGGAACAAAGTCAGATTGGGAGCTAGTGCTGTATTCATTTTGCAGTT
FD538020       --> AATGGGAACAAAGTCAGATTGGGAGCTAGTGCTGTGTTCATTTTGCAGTT

               201    -    251
UN16600        --> TCAGGTCTGTTGCTTCTTCTTGATAGTCTTCGGTTTTGCCCCAGAGAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY440755       <-- TAAGATCAGTTGCTTCTTCTTGATAGTCTTCGGTTTTGCCCCATAGAACA
EX757869       <-- TCAGGTCTGTTGCTTCTTCTTGATAGTCTTCGGTTTTGCCCCATAGAACA
EX763476       <-- TCAGGTCTGTTGCTTCTTCTTGATAGTCTTCGGTTTTGCCCCAGAGAACA
FD579456       <-- ..................................................
EX756850       <-- ..................................................
FD978597       <-- ..................................................
EX889140       <-- ..................................................
EW723473       <-- ..................................................
EY932640       <-- ..................................................
FD988688       <-- ..................................................
FD541812       <-- ..................................................
EV525131       <-- ..................................................
FD939139       <-- ..................................................
EX762990       <-- ..................................................
EV537217       <-- ..................................................
FD973863       <-- ..................................................
FD579677       <-- ..................................................
FD949465       <-- ..................................................
FD940450       <-- ..................................................
EY900201       <-- ..................................................
EX761341       --> TCAGGTCTGTTGCTTCTTCTTGATAGTCTTCGGTTTTGCCCCATAGAACA
EV541500       --> TCAGGTCTGTTGCTTCTTCTTGATAGTCTTCGGTTTTGCCCCAGAGAACA
EY895801       --> TCAGGTCTGTTGCTTCTTCTTGATAGTCTTCGGTTTTGCCCCAGAGAACA
EY902256       --> TCAGGTCTGTTGCTTCTTCTTGATAGTCTTCGGTTTTGCCCCAGAGAACA
EX892934       --> TCAGGTCTGTTGCTTCTTCTTGATAGTCTTCGGTTTTGCCCCAGAGAACA
FD984555       --> TCAGGTCTGTTGCTTCTTCTTGATAGTCTTCGGTTTTGCCCCAGAGAACA
EX767146       --> TCAGGTCTGTTGCTTCTTCTTGATAGTCTTCGGTTTTGCCCCATAGAACA
EW728080       --> TCAGGTCTGTTGCTTCTTCTTGATGGTCTTCGGTTTTGCCCCAGAGAACA
EV529953       --> TCAGGTCTGTTGCTTCTTCTTGATAGTCTTCGGTTTTGCCCCAGAGAACA
EX767545       --> TCAGGTCTGTTGCTTCTTCTTGATAGTCTTCGGTTTTGCCCCAGAGAACA
FD538020       --> TCAGGTCTGTTGCTTCTTCTTGATAGTCTTCGGTTTTGCCCCAGAGAACA

               251    -    301
UN16600        --> ATGTAGAGACCAACGATGATAGCCAAAGCCCCCAGCAAGCTCCCAAGGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY440755       <-- ACGTAGAGCCCAAAGATGATAGCCAAAGCCCCCAGCAAGCTCCCAAGGTA  Raphanus sativus cv GSK3-1
EX757869       <-- ACGTAGAGACCAAAGATGATAGCCAAAGCCCCCAGCAAGCTCCCAAGGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763476       <-- ATATAGAGACCAACGATGATAGCCAAAGCCCCCAGCAAGCTCCCAAGGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD579456       <-- ......AGACCAACGATGATAGCCAAAGCCCC-AGCAAGCTCCCAAGGTA  Raphanus sativus cv Rat-Tail Radish #3870
EX756850       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978597       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX889140       <-- ..................................................  Raphanus sativus var. oleiformis
EW723473       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY932640       <-- ..................................................  Raphanus sativus var. oleiformis
FD988688       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD541812       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV525131       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD939139       <-- ..................................................  Raphanus sativus var. oleiformis
EX762990       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV537217       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973863       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD579677       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD949465       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD940450       <-- ..................................................  Raphanus sativus var. oleiformis
EY900201       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX761341       --> ACGTAGAGACCAAAGATGATAGCCAAAGCCCCCAGCAAGCTCCCAAGGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541500       --> ATGTAGAGACCAACGATGATAGCCAAAGCCCCCAGCAAGCTCCCAAGGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895801       --> ATATAGAGACCAACGATGATAGCCAAAGCCCCCAGCAAGCTCCCAAGGTA  Raphanus raphanistrum subsp. maritimus
EY902256       --> ATGTAGAGACTAACGATGATAGCCAAAGCCCCCAGCAAGCTCCCAAGGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX892934       --> ATATAGAGACCAACGATGATAGCCAAAGCCCCCAGCAAGCTCCCAAGGTA  Raphanus sativus var. oleiformis
FD984555       --> ATGTAGAGACCAACGATGATAGCCAAAGCCCCCAGCAAGCTCCCAAGGTA  Raphanus raphanistrum subsp. landra
EX767146       --> ACGTAGAGACCAAAGATGATAGCCAAAGCCCCCAGCAAGCTCCCAAGGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728080       --> ATATAGAGACCAACGATGATAGCCAAAGCCCCCAGCAAGCTCCCAAGGTA  Raphanus sativus cv Early Scarlet Globe
EV529953       --> ATATAGAGACCAACGATGATAGCCAAAGCCCCCAGCAAGCTCCCAAGGTA  Raphanus raphanistrum subsp. maritimus
EX767545       --> ATATAGAGACCAACGATGATAGCCAAAGCCCCCAGCAAGCTCCCAAGGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538020       --> ATGTAGAGACCAACGATGATAGCCAAAGCCCCCAGCAAGCTCCCAAGGTA  Raphanus raphanistrum subsp. raphanistrum (MS)

               301    -    351
UN16600        --> AGTCTGCTCGTTTAGATACAGAGCGCCGAAGAAAGTGACAATGACCGTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY440755       <-- AGTCTTCTCTTTTAGATACAGAGCGCCGAAGAAAGTGACAATGACCGTAG  Raphanus sativus cv GSK3-1
EX757869       <-- AGTCTTCTCTTTTAGATACAGAGCGCCGAAGAAAGTGACAATGACAGTAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763476       <-- AGTCTGCTCGTTTAGATACAGAGCGCCGAAGAAAGTGACAATGACCGTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD579456       <-- AGTCTGCTCGTTTAGATACGGAGCGCCGAAGAAAGTGACAATGACCGTAG  Raphanus sativus cv Rat-Tail Radish #3870
EX756850       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978597       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX889140       <-- ..................................................  Raphanus sativus var. oleiformis
EW723473       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY932640       <-- ..................................................  Raphanus sativus var. oleiformis
FD988688       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD541812       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV525131       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD939139       <-- ..................................................  Raphanus sativus var. oleiformis
EX762990       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV537217       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973863       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD579677       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD949465       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD940450       <-- ..................................................  Raphanus sativus var. oleiformis
EY900201       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX761341       --> AGTCTTCTCTTTTAGATACAGAGCGCCGAAGAAAGTGACAATGACAGTAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541500       --> AGTCTTCTCGTTTAGATACAGAGCGCCGAAGAAAGTGACAATGACCGTAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895801       --> AGTCTGCTCGTTTAGATACAGAGCGCCGAAGAAAGTGACAATGACCGTAG  Raphanus raphanistrum subsp. maritimus
EY902256       --> AGTCTTCTCGTTTAGATACAGAGCGCCGAAGAAAGTGACAATGACCGTAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX892934       --> AGTCTGCTCGTTTAGATACAGAGCGCCGAAGAAAGTGACAATGACCGTAG  Raphanus sativus var. oleiformis
FD984555       --> AGTCTGCTCGTTTAGATACAGAGCGCCGAAGAAAGTGACAATGACCGTAG  Raphanus raphanistrum subsp. landra
EX767146       --> AGTCTTCTCTTTTAGATACAGAGCGCCGAAGAAAGTGACAATGACAGTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728080       --> AGTCTGCTCGTTTAGATACAGAGCGCCGAAGAAAGTGACAATGGCCGCAG  Raphanus sativus cv Early Scarlet Globe
EV529953       --> AGTCTGCTCGTTTAGATACAGAGCGCCGAAGAAAGTGACGATGACCGTAG  Raphanus raphanistrum subsp. maritimus
EX767545       --> AGTCTGCTCGTTTAGATACAGAGCGCCGAAGAAAGTGACAATGACCGTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538020       --> AGTCTTCTCGTTTAGATACAGAGCGCCGAAGAAAGTGACAATGACCGTAG  Raphanus raphanistrum subsp. raphanistrum (MS)

               351    -    401
UN16600        --> AAAGAGGGTTGAAGAGTGCAGAGAAAAGAGGTCCTTTCCGCGACACGCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY440755       <-- ATAGAGGGTTGAAGAGTGCAGAGAAAAGAGGTCCTTTCCGCGACACGCAC
EX757869       <-- AAAGAGGGTTGAAGAGTGCAGAGAAAAGAGGTCCTTTCCGCGACACGCAC
EX763476       <-- AAAGAGGGTTGAAGAGTGCAGAGAAAAGAGGTCCTTTCCGCGACACGCAC
FD579456       <-- AAAGAGGGTTGAAGAGTGCAGAGAAAAGAGGTCCTTTCCGCGACACGCAC
EX756850       <-- ..................................................
FD978597       <-- ..................................................
EX889140       <-- ..................................................
EW723473       <-- ..................................................
EY932640       <-- ..................................................
FD988688       <-- ..................................................
FD541812       <-- ..................................................
EV525131       <-- ..................................................
FD939139       <-- ..................................................
EX762990       <-- ..................................................
EV537217       <-- ..................................................
FD973863       <-- ..................................................
FD579677       <-- ..................................................
FD949465       <-- ..................................................
FD940450       <-- ..................................................
EY900201       <-- ..................................................
EX761341       --> AAAGAGGGTTGAAGAGTGCAGAGAAAAGAGGTCCTTTCCGCGACACGCAC
EV541500       --> AAAGAGGGTTGAAGAGTGCAGAGAAAAGAGGTCCTTTCCGCGACACGCAC
EY895801       --> AAAGAGGGTTGAAGAGTGCAGAGAAAAGAGGTACTTTCCGCGACACGCAC
EY902256       --> AAAGAGGGTTGAAGAGTGCAGAGAAAAGAGGTCCTTTCCGCGACACGCAC
EX892934       --> AAAGAGGGTTGAAGAGTGCAGAGAAAAGAGGTCCTTTCCGCGACACGCAC
FD984555       --> AAAGAGGGTTGAAGAGTGCAGAGAAAAGAGGTCCTTTCCGCGACACGCAC
EX767146       --> AAAGAGGGTTGAAGAGTGCAGAGAAAAGAGGTCCTTTCCGCGACACGCAC
EW728080       --> AAAGAGGGTTGAAGAGTGCAGAGAAAAGAGGTCCTTTCCGCGACACGCAC
EV529953       --> AAAGAGGGTTGAAGAGTGCAGAGAAAAGAGGTCCTTTCCGCGACACGCAC
EX767545       --> AAAGAGGGTTGAAGAGTGCAGAGAAAAGAGGTCCTTTCCGCGACACGCAC
FD538020       --> AAAGAGGGTTGAAGAGTGCAGAGAAAAGAGGTCCTTTCCGCGACACGCAC

               401    -    451
UN16600        --> CAAGCTTGTAGAAAGAAAGAAACCGCGAGTTGAAGTCCAGAGTATATGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY440755       <-- CAAGCTTGTAGAAAGAAAGAAACCGCGAGTTGAAGTCCAGAGTATATGCA  Raphanus sativus cv GSK3-1
EX757869       <-- CAAGCTTGTAGAAAGAAAGACACTGCCAACTGGAGTCCAGAGTATATGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763476       <-- CAAGCTTGTAGAAAGAAAGAAACCGCGAGTTGAAGTCCAGAGTATATGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD579456       <-- CAAGCTTGTAGAAAGAAAGAAACCGCGAGTTGAAGTCCAGAGTATATGCA  Raphanus sativus cv Rat-Tail Radish #3870
EX756850       <-- ....................................CCAGAGTATATGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978597       <-- .................................gagtcgGAGTATATGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX889140       <-- ...............................................GCA  Raphanus sativus var. oleiformis
EW723473       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY932640       <-- ..................................................  Raphanus sativus var. oleiformis
FD988688       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD541812       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV525131       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD939139       <-- ..................................................  Raphanus sativus var. oleiformis
EX762990       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV537217       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973863       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD579677       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD949465       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD940450       <-- ..................................................  Raphanus sativus var. oleiformis
EY900201       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX761341       --> CAAGCTTGTAGAAAGAAAGACACTGCCAACTGGAGTCCAGAGTATATGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541500       --> CAAGCTTGTAGAAAGAAAGACACTGCGAGTTGGAGTCCAGAGTATATGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895801       --> CAAGCTTGTAGAAAGAAAGAAACCGCGAGTTGAAGTCCAGAGTATATGCA  Raphanus raphanistrum subsp. maritimus
EY902256       --> CAAGCTTGTAGAAAGAAAGACACTGCGAGTTGGAGTCCAGAGTAAATGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX892934       --> CAAGCTTGTAGAAAGAAAGAAACCGCGAGTTGAAGTCCAGAGTATATGCA  Raphanus sativus var. oleiformis
FD984555       --> CAAGCTTGTAGAAAGAAAGACACTGCCAACTGGAGTCCAGAGTAAACGCA  Raphanus raphanistrum subsp. landra
EX767146       --> CAAGCTTGTAGAAAGAAAGACACTGCCAACTGGAGTCCAGAGTATATGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728080       --> CAAGCTTGTAGAAAGAAAGAAACCGCGAGTTGAAGTCCAGAGTATATGCA  Raphanus sativus cv Early Scarlet Globe
EV529953       --> CAAGCTTGTAGAAAGAAAGAAACCGCGAGTTGAAGTCCAGAGTATATGCA  Raphanus raphanistrum subsp. maritimus
EX767545       --> CAAGCTTGTAGAAAGAAAGAAACCGCGAGTTGAAGTCCAGAGTATATGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538020       --> CAAGCTTGTAGAAAGAAAGACACTGCGAGTTGGAGTCCAGAGTATATGCA  Raphanus raphanistrum subsp. raphanistrum (MS)

               451    -    501
UN16600        --> GCAGGAGAGTTTCAACGAGGAATCAAGCTTCCAGGACGTTAAGTCAGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY440755       <-- GCAGGAGAGTTTCAACGAGGAATCAAGCTTCCAGGACGTTAAGTCAGTGT
EX757869       <-- GCAGGAGAGTTTCAATGAGGAATCAAGCTTCCAGGACGTTGAGTCAGTGT
EX763476       <-- GCAGGAGAGTTTCAACGAGGAATCAAGCTTCCAGGACGTTAAGTCAGTGT
FD579456       <-- GCAGGAGAGTTTCAACGAGGAATCAAGCTTCCAGGACGTTAAGTCAGTGT
EX756850       <-- GCAGGAGAGTTTCAATGAGGAATCAAGCTTCCAGGACGTTAAGTCAGTGT
FD978597       <-- GCAG-AGAGTTTCAATGAGGAATCAAGCTTCCAGGACGTTAAGTCAGTGT
EX889140       <-- GCAG-AGAGTT-CAACGAGGAATCAAGCTTCCAGGACGT-AAGTCAGTGT
EW723473       <-- ..................................GACGTTAAGTCAGTGT
EY932640       <-- ....................................CGTTA-GTCAGTGT
FD988688       <-- ......................................gTAAGTCAGTGT
FD541812       <-- ................................................GT
EV525131       <-- ..................................................
FD939139       <-- ..................................................
EX762990       <-- ..................................................
EV537217       <-- ..................................................
FD973863       <-- ..................................................
FD579677       <-- ..................................................
FD949465       <-- ..................................................
FD940450       <-- ..................................................
EY900201       <-- ..................................................
EX761341       --> GCAGGAGAGTTTCAATGAGGAATCAAGCTTCCAGGACGTTGAGTCAGTGT
EV541500       --> GCAGGAGAGTTTCAACGAGGAATCAAGCTTCCAGGACGTTAAGTCAGTGT
EY895801       --> GCAGGAGAGTTTCAACGAGGAATCAAGCTTCCAGGACGTTAAGTCAGTGT
EY902256       --> GCAGGAGAGTTTCAACGAGGAATCAAGCTTCCAGGACGTAAAGTCAGTGT
EX892934       --> GCAGGAGAGTTTCAACGAGGAATCAAGCTTCCAGGACGTTAAGTCAGTGT
FD984555       --> GCAGGAGAGTTTCAATGAGGAATCAAGCTTCCAGGACGTTAAGTCAGTGT
EX767146       --> GCAGGAGAGTTTCAATGAGGAATCAAGCTTCCAGGACGTTAAGTCAGTGT
EW728080       --> GCAGGAGAGTTTCAACGAGGAATCAAGCTTCCAGGACGTTAAGTCAGTGT
EV529953       --> GCAGGAGAGTTTCAACGAGGAATCAAGCTTCCAGGACGTTAAGTCAGTGT
EX767545       --> GCAGGAGAGTTTCAACGAGGAATCAAGCTTCCAGGACGTTAAGTCAGTGT
FD538020       --> GCAGGAGAGTTTCAACGAGGAATCAAGCTTCCAGGACGTTAAGTCAGTGT

               501    -    551
UN16600        --> TGCCTAAGGCGAGGGCCATGAAGAAAGAGGCTATGGTAGCCAAGAAACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY440755       <-- TGCCTAAGGCGAGGGCCATGAAGAAAGAGGCTATGGTAGCCAAGAAACAA  Raphanus sativus cv GSK3-1
EX757869       <-- TGCCTAAGGCGAGAGCCATGAAGAAAGAGGCTATGGTAGCCAAGAAACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763476       <-- TGCCTAAGGCGAGGGCCATGAAGAAAGAGGCTATGGTAGCCAAGAAACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD579456       <-- TGCCTAAGGCGAGGGCCATGAAGAAAGAGGCTATGGTAGCCAAGAAACAA  Raphanus sativus cv Rat-Tail Radish #3870
EX756850       <-- -G-CTAA-GCGAGAGCCATGAAGAAAGAGGCTATGGTAGCCAAGAAACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978597       <-- TGC-TAAGGCGAGAGCCATGAAGAAAGAGGCTATGGTAGCCAAGAAACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX889140       <-- -G-CTAAGGCGAGGGCCATGAAGAAAGAGGCTATGGTAGCCAAGAAACAA  Raphanus sativus var. oleiformis
EW723473       <-- TGC-TAAGGCGAGGGCCATGAAGAAAGAGGCTATGGTAGCCAAGAAACAA  Raphanus sativus cv Early Scarlet Globe
EY932640       <-- -G-CTAA-GCGAGGGCCATGAAGAAAGAGGCTATGGTAGCCAAGAAACAA  Raphanus sativus var. oleiformis
FD988688       <-- -G-CTAAGGCGAGGGCCATGAAGAAAGAGGCTATGGTAGCCAAGAAACAA  Raphanus raphanistrum subsp. landra
FD541812       <-- TGTCTAAGGCGAGAGCCATGAAGAAAGAGGCTATGGTAGCCAAGAAACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV525131       <-- .......GGCGAGGGCCATGAAGAAAGAGGCTATGGTAGCCAAGAAACAA  Raphanus raphanistrum subsp. maritimus
FD939139       <-- ..................................................  Raphanus sativus var. oleiformis
EX762990       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV537217       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973863       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD579677       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD949465       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD940450       <-- ..................................................  Raphanus sativus var. oleiformis
EY900201       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX761341       --> TGCCTAAGGCGAGAGCCATGAAGAAAGAGGCTATGGTAGCCAAGAAACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541500       --> TGCCTAAGGCGAGAGCCATGAAGAAAGAGGCTATGGTAGCCAAGAAACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895801       --> TGCCTAAGGCGAGGGCCATGAAGAAAGAGGCTATGGTAGCCAAGAAACAA  Raphanus raphanistrum subsp. maritimus
EY902256       --> TGCCTAAGGCGAGAGCCATGAAGAAAGAGGCTATGGTAGCCAAGGAACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX892934       --> TGCCTAAGGCGAGGGCCATGAAGAAAGAGGCTATGGTAGCCAAGAAACAA  Raphanus sativus var. oleiformis
FD984555       --> TGCCTAAGGCGAGGGCCATGAAGAAAGAGGCTATGGTAGCCAAGAAACAA  Raphanus raphanistrum subsp. landra
EX767146       --> TGCCTAAGGCGAGAGCCATGAAGAAAGAGGCTATGGTAGCCAAGAAACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728080       --> TGCCTAAGGCGAGGGCCATGAAGAAAGAGGCTATGGTAGCCAAGAAACAA  Raphanus sativus cv Early Scarlet Globe
EV529953       --> TGCCTAAGGCGAGGGCCATGAAGAAAGAGGCTATGGTAGCCAAGAAACAA  Raphanus raphanistrum subsp. maritimus
EX767545       --> TGCCTAAGGCGAGGGCCATGAAGAAAGAGGCTATGGTAGCCAAGAAACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538020       --> TGTCTAAGGCGAGAGCCATGAAGAAAGAGGCTATGGTAGCCAAGAAACAA  Raphanus raphanistrum subsp. raphanistrum (MS)

               551    -    601
UN16600        --> GTCCAGGAGGAAGTGTACAAGTGATCATGACAATGATTAGCAATTGGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY440755       <-- GTCCAGGAGGAAGTGTACAAGTGATCATGACAATGATTAGCAATTGGAAC
EX757869       <-- GTCCAGGAGGAAGTGTACAAGTGATCATGACAATGATTAGCAATTGGAAC
EX763476       <-- GTCCAGGAGGAAGTGTACAAGTGATCATGACAATGATTAGCAATTGGAAC
FD579456       <-- GTCCAGGAGGAAGTGTACAAGTGATCATGACAATGATTAGCAATTGGAAC
EX756850       <-- GTCCAGGAGGAAGTGTACAAGTGATCATGACAATGATTAGCAATTGGAAC
FD978597       <-- GTCCAGGAGGAAGTGTACAAGTGATCATGACAATGATTAGCAATTGGAAC
EX889140       <-- GTCCAGGAGGAAGTGTACAAGTGATCATGACAATGATTAGCAATTGGAAC
EW723473       <-- GTCCAGGAGGAAGTGTACAAGTGATCATGACAATGATTAGCAATTGGAAC
EY932640       <-- GTCCAGGAGGAAGTGTACAAGTGATCATGACAATGATTAGCAATTGGAAC
FD988688       <-- GTCCAGGAGGAAGTGTACAAGTGATCATGACAATGATTAGCAATTGGAAC
FD541812       <-- GTCCAGGATGAAGTGTACAAGTGATCATGACAATGATTAGCAATTGGAAC
EV525131       <-- GTCCAGGAGGAAGTGTACAAGTGATCATGACAATGATTAGCAATTGGAAC
FD939139       <-- ...............................................gaa
EX762990       <-- ..................................................
EV537217       <-- ..................................................
FD973863       <-- ..................................................
FD579677       <-- ..................................................
FD949465       <-- ..................................................
FD940450       <-- ..................................................
EY900201       <-- ..................................................
EX761341       --> GTCCAGGAGGAAGTGTACAAGTGATCATGACAATGATTAGCAATTGGAAC
EV541500       --> GTCCAGGATGAAGTGTACAAGTGATCATGACAATGATTAGCAATTGGAAC
EY895801       --> GTCCAGGAGGAAGTGTACAAGTGATCATGACAATGATTAGCAATTGGAAC
EY902256       --> GTCCAGGAGGAAGTGTACAAGTGATCATGACAATGATTAGCAATTGGAAC
EX892934       --> GTCCAGGAGGAAGTGTACAAGTGATCATGACAATGATTAGCAATTGGAAC
FD984555       --> GTCCAGGAGGAAGTGTACAAGTGATCATGACAATGATTAGCAATTGGAAC
EX767146       --> GTCCAGGAGGAAGTGTACAAGTGATCATGACAATGATTAGCAATTGGAAC
EW728080       --> GTCCAGGAGGAAGTGTACAAGTGATCATGACAATGATTAGCAATTGGAAC
EV529953       --> GTCCAGGAGGAAGTGTACAAGTGATCATGACAATGATTAGCAATTGGAAC
EX767545       --> GTCCAGGAGGAAGTGTACAAGTGATCATGACAATGATTAGCAATTGGAAC
FD538020       --> GTCCAGGATGAAGTGTACAAGTGATCATGACAATGATTAGCAATTGGAAC

               601    -    651
UN16600        --> CTGAAGGATCAACCAAGAAGACCAAGAAAA-TGTGCTGACGAGAAGACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY440755       <-- CTGAAGGATCAACCAAGAAGACCAAGAAAA-TGTGCTGACGAGAAGACAT  Raphanus sativus cv GSK3-1
EX757869       <-- CTGAAGGATCAACCA-GAGGACCAAGAAAA-TGTGCTGACGAGAAGACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763476       <-- CTGAAGGATCAACCAAGAAGACCAAGAAAA-TGTGCTGACGAGAAGACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD579456       <-- CTGAGGGATCAACCAAGAAGACCAAGAAAA-TGTGCTGACGAGAAGACAT  Raphanus sativus cv Rat-Tail Radish #3870
EX756850       <-- GTGAAGGATCAACCAGGAGGACCAAGAAAA-TGTGCTGACGAGAAGACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978597       <-- -TGAAGGATCAACCAGGAGGACCAAGAAAA-TGTGCTGACGAGAAGACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX889140       <-- -TGAAGGATCAACCAAGAAGACCAAGAAAA-TGTGCTGACGAGAAGACAT  Raphanus sativus var. oleiformis
EW723473       <-- CTGAAGGATCAACCAAGAAGACCAAGAAAAATGTGCTGACGAGAAGACAT  Raphanus sativus cv Early Scarlet Globe
EY932640       <-- -TGAAGGATCAACCAAGAAGACCAAGAAAA-TGTGCTGACGAGAAGACAT  Raphanus sativus var. oleiformis
FD988688       <-- -TGAAGGATCAACCAAGAAGACCAAGAAAA-TGTGCTGACGAGAAGACAT  Raphanus raphanistrum subsp. landra
FD541812       <-- CTGAAGGATCAACCAGGAGGACCAAGAAAA-TGTGCTGACGAGAAGACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV525131       <-- -TGAAGGATCAACCAAGAAGACCAAGAAAA-TGCGCTGACGAGAAGACAT  Raphanus raphanistrum subsp. maritimus
FD939139       <-- CTGAAGGATCAACCAAGAAGACCAAGAAAA-TGTGCTGACGAGAAGACAT  Raphanus sativus var. oleiformis
EX762990       <-- .TGATGGATCAACCAGGAGGACCAAGAAAA-TGTGCTGACGAGAAGACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV537217       <-- ....AGGATCAACCAGGAGGACCAAGAAAA-TGTGCTGACGAGAAGACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973863       <-- ....AGGATCAACCAGGAGGACCAAGAAAA-TGTGCTGACGAGAAGACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD579677       <-- ............CCAAGAAGACCAAGAAAA-TGTGCTGACGAGAAGACAT  Raphanus sativus cv Rat-Tail Radish #3870
FD949465       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD940450       <-- ..................................................  Raphanus sativus var. oleiformis
EY900201       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX761341       --> CTGAAGGATCAACCA-GAGGACCAAGAAAA-TGTGCTGACGAGAAGACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541500       --> CTGAAGGATCAACCAGGAGGACCAAGAAAA-TGTGCTGACGAGAAGACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895801       --> CTGAAGGATCAACCAAGAAGACCAAGAAAA-TGTGCTGACGAGAAGACAT  Raphanus raphanistrum subsp. maritimus
EY902256       --> CTGAAGGATCAACCAGGAGGACCAAGAAAA-TGTGCTGACGAGAAGACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX892934       --> CTGAAGGATCAACCAAGAAGACCAAGAAAA-TGTGCTGACGAGAAGACAT  Raphanus sativus var. oleiformis
FD984555       --> CTGAAGGATCAACCAAGAAGACCAAGAAAA-TGTGCTGACGAGAAGACAT  Raphanus raphanistrum subsp. landra
EX767146       --> CTGAAGGATCAACCAGGAGGACCAAGAAAA-TGTGCTGACGAGAAGACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728080       --> CTGAAGGATCAACCAAGAAGACCAAGAAAA-TGTGCTGACGAGAAGACAT  Raphanus sativus cv Early Scarlet Globe
EV529953       --> CTGAAGGATCAACCAAGAAGACCAAGAAAA-TGCGCTGACGAGAAGACAT  Raphanus raphanistrum subsp. maritimus
EX767545       --> CTGAAGGATCAACCAAGAAGACCAAGAAAA-TGTGCTGACGAGAAGACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538020       --> CTGAAGGATCAACCAGGAGGACCAAGAAAA-TGTGCTGACGAGAAGACAT  Raphanus raphanistrum subsp. raphanistrum (MS)

               651    -    701
UN16600        --> AAGCAACCGAGTAACCAAGTGGTGTCGTTGTCTTGGTTTAACAGGGCGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY440755       <-- AAGCAACCGAGTAACCAAGTGGTGTCGTTGTCTTGGTTTAACAGGGCGTT  Raphanus sativus cv GSK3-1
EX757869       <-- AAGCAACCGAGTAACCAAGTGGTGTCGTTGTCTTGGTTTAACAGGGCGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763476       <-- AAGCAACCGAGTAACCAAGTGGTGTCGTTGTCTTGGTTTAACATGGCGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD579456       <-- AAGCAACCGAGTAACCAAGTGGTGTCGTTGTCTTGGTTTAACATGGCGTT  Raphanus sativus cv Rat-Tail Radish #3870
EX756850       <-- AAGAAACCGAGTAACCAAGTGGTGTCGTTGTCTTGGTTTAACAGGGCGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978597       <-- AAGCAACCGAGTAACCAAGTGGTGTCGTTGTCTTGGTTTAACAGGGCGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX889140       <-- AAGCAACCGAGTAACCAAGTGGTGTCGTTGTCTTGGTTTAACATGGCGTT  Raphanus sativus var. oleiformis
EW723473       <-- AAGCAACCGAGTAACCAAGTGGTGTCGTTGTCTTGGTTTAACATGGCGTT  Raphanus sativus cv Early Scarlet Globe
EY932640       <-- AAGCAACCGAGTAACCAAGTGGTGTCGTTGTCTTGGTTTAACATGGCGTT  Raphanus sativus var. oleiformis
FD988688       <-- AAGCAACCGAGTAACCAAGTGGTGTCGTTGTCTTGGTTTAACAGGGCGTT  Raphanus raphanistrum subsp. landra
FD541812       <-- AAGCAACCGAGTAACCAAGTGGTGTCGTTGTCTTGGTTTAACAGGGCGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV525131       <-- AAGCAACCGAGTAACCAAGTGGTGTCGTTGTCTTGGTTTAACAGGGCGTT  Raphanus raphanistrum subsp. maritimus
FD939139       <-- AAGCAACCGAGTAACCAAGTGGTGTCGTTGTCTTGGTTTAACATGGCGTT  Raphanus sativus var. oleiformis
EX762990       <-- AAGCAACCGAGTAACCAAGTGGTGTCGTTGTCTTGGTTTAACAGGGCGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV537217       <-- AAGCAACCGAGTAACCAAGTGGTGTCGTTGTCTTGGTTTAACAGGGCGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973863       <-- AAGCAACCGAGTAACCAAGTGGTGTCGTTGTCTTGGTTTAACAGGGCGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD579677       <-- AAGCAACCGAGTAACCAAGTGGTGTCGTTGTCTTGGTTTAACATGGCGTT  Raphanus sativus cv Rat-Tail Radish #3870
FD949465       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD940450       <-- ..................................................  Raphanus sativus var. oleiformis
EY900201       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX761341       --> AAGCAACCGAGTAACCAAGTGGTGTCGTTGTCTTGGTTTAACAGGGCGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541500       --> AAGCAACCGAGTAACCAAGTGGTGTCGTTGTCTTGGTTTAACAGGGCGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895801       --> AAGCAACCGAGTAACCAAGTGGTGTCGTTGTCTTGGTTTAACATGGCGTT  Raphanus raphanistrum subsp. maritimus
EY902256       --> AAGCAACCGAGTAACCAAGTGGTGTCGTTGTCTTGGTTTA..........  Raphanus raphanistrum subsp. raphanistrum (MS)
EX892934       --> AAGCAACCGAGTAACCAAGTGGTGTCGTTGTCTTGGTTTAACATGGCGTT  Raphanus sativus var. oleiformis
FD984555       --> AAGCAACCGAGTAACCAAGTGGTGTCGTTGTCTTGGTTTAACAGGGCGTT  Raphanus raphanistrum subsp. landra
EX767146       --> AAGCAACCGAGTAACCAAGTGGTGTCGTTGTCTTGGTTTAACAGGGCGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728080       --> AAGCAACCGAGTAACCAAGTGGTGTCGTTGTCTTGGTTTAACATGGCGTT  Raphanus sativus cv Early Scarlet Globe
EV529953       --> AAGCAACCGAGTAACCAAGTGGTGTCGTTGTCTTGGTTTAACAGGGCGTT  Raphanus raphanistrum subsp. maritimus
EX767545       --> AAGCAACCGAGTAACCAAGTGGTGTCGTTGTCTTGGTTTAACATGGCGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538020       --> AAGCAACCGAGTAACCAAGTGGTGTCGTTGTCTTGGTTTAACAGGGCGTT  Raphanus raphanistrum subsp. raphanistrum (MS)

               701    -    751
UN16600        --> GAGCAGTTTAGGTCCTCTTAGAAAAGTCATTGCCATGGCTCCTCCCACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY440755       <-- GAGCAGTTTAGGTCCTCTTAGAAAAGTCATTGCCATGGCTCCTCCCACAC  Raphanus sativus cv GSK3-1
EX757869       <-- GAGCAGTTTAGGTCCTCTTAGAAAAGTCATTGCCATGGCTCCTCCCACAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763476       <-- GAGCAGTTTAGGTCCTCTTAGAAAAGTCATTGCCATGGCTCCTCCTACAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD579456       <-- GAGCAGTTTAGGTCCTCTTAGAAAAGTCATTGCCATGGCTCCTCCTACAC  Raphanus sativus cv Rat-Tail Radish #3870
EX756850       <-- GAGCAGTTTAGGTCCTCTTAGAAAAGTCATTGCCATGGCTCCTCCCACAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978597       <-- GAGCAGTTTAGGTCCTCTTAGAAAAGTCATTGCCATGGCTCCTCCCACAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX889140       <-- GAGCAGTTTAGGTCCTCTTAGAAAAGTCATTGCCATGGCTCCTCCTACAC  Raphanus sativus var. oleiformis
EW723473       <-- GAGCAGTTTAGGTCCTCTTAGAAAAGTCATTGCCATGGCTCCTCCTACAC  Raphanus sativus cv Early Scarlet Globe
EY932640       <-- GAGCAGTTTAGGTCCTCTTAGAAAAGTCATTGCCATGGCTCCTCCTACAC  Raphanus sativus var. oleiformis
FD988688       <-- GAGCAGTTTAGGTCCTCTTAGAAAAGTCGTTGCCATGGCTCCTCCCACAC  Raphanus raphanistrum subsp. landra
FD541812       <-- GAGCAGTTTAGGTCCTCTTAGAAAAGTCATTGCCATGGCTCCTCCCACAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV525131       <-- GAGCAGTTTAGGTCCTCTTAGAAAAGTCATTGCAATGGCTCCTCCCACAC  Raphanus raphanistrum subsp. maritimus
FD939139       <-- GAGCAGTTTAGGTCCTCTTAGAAAAGTCATTGCCATGGCTCCTCCTACAC  Raphanus sativus var. oleiformis
EX762990       <-- GAGCAGTTTAGGTCCTCTTAGAAAAGTCATTGCCATGGCTCCTCCCACAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV537217       <-- GAGCAGTTTAGGTCCTCTTAGAAAAGTCATTGCCATGGCTCCTCCCACAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973863       <-- GAGCAGTTTAGGTCCTCTTAGAAAAGTCATTGCCATGGCTCCTCCCACAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD579677       <-- GAGCAGTTTAGGTCCTCTTAGAAAAGTCATTGCCATGGCTCCTCCTACAC  Raphanus sativus cv Rat-Tail Radish #3870
FD949465       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD940450       <-- ..................................................  Raphanus sativus var. oleiformis
EY900201       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX761341       --> GAGCAGTTTAGGTCCTCTTAGAAAAGTCATTGCCATGGCTCCTCCCACAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541500       --> GAGCAGTTTAGGTCCTCTTAGAAAAGTCATTGCCATGGCTCCTCCCACAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895801       --> GAGCAGT...........................................  Raphanus raphanistrum subsp. maritimus
EY902256       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX892934       --> GAGCAGT...........................................  Raphanus sativus var. oleiformis
FD984555       --> GAG...............................................  Raphanus raphanistrum subsp. landra
EX767146       --> GAGCAGTTTAGGTCCTCTTAGAAAAGTCATTGCCATGGCTCCTCCCACAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728080       --> GAGCAGTTTAGGTCCTCTTAGAAAAGTCATTGCCATGGCTCCTCCTACAC  Raphanus sativus cv Early Scarlet Globe
EV529953       --> GAGCAGTTTAGGTCCTCTTAGAAAAGTCATTGCAATGGCTCCTCCCACAC  Raphanus raphanistrum subsp. maritimus
EX767545       --> GAGCAGTTTAGGTCCTCTTAGAAAAGTCATTGCCATGGCTCCTCCTACAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538020       --> GAGCAGTTTAGGTCCTCTTAGAAAAGTCATTGCCATGGCTCCTCCCACAC  Raphanus raphanistrum subsp. raphanistrum (MS)

               751    -    801
UN16600        --> ACACACCTGTTCCTATTATCTTTGCTACACTTTTCAAACTTCTCCTCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY440755       <-- ACACACCTGTTCCTATTATCTTTGCTACACTTTTCAAACTTCTACTCTTT  Raphanus sativus cv GSK3-1
EX757869       <-- ACACACCTGTTCCTATTATCTTTGCTACACTTTTCAAACTTCTACTCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763476       <-- ACACACCTGTTCCTc...................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD579456       <-- ACACACCTGTTCCTATTATCTTTGCTACACTTTTCAAACTTCTCCTCTTT  Raphanus sativus cv Rat-Tail Radish #3870
EX756850       <-- ACACACCTGTTCCTATTATCTTTGCTACACTTTTCAAACTTCTACTCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978597       <-- ACACACCTGTTCCTATTATCTTTGCTACACTTTTCAAACTTCTACTCTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX889140       <-- ACACACCTGTTCCTATTATCTTTGCTACACTTTTCAAACTTCTCCTCTTT  Raphanus sativus var. oleiformis
EW723473       <-- ACACACCTGTTCCTATTATCTTTGCTACACTTTTCAAACTTCTCCTC--T  Raphanus sativus cv Early Scarlet Globe
EY932640       <-- ACACACCTGTTCCTATTATCTTTGCTACACTTTTCAAACTTCTCCTCTTT  Raphanus sativus var. oleiformis
FD988688       <-- ACACACCTGTTCCTATTATCTTTGCTACACTTTTCAAACTTCTACTCTTT  Raphanus raphanistrum subsp. landra
FD541812       <-- ACACACCTGTTCCTATTATCTTTGCTACACTTTTCAAACTTCTCCTCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV525131       <-- ACACACCTGTTCCTATTATCTTTGCTACACTCTTCAAACTTCTCCTCTTT  Raphanus raphanistrum subsp. maritimus
FD939139       <-- ACACACCTGTTCCTATTATCTTTGCTACACTTTTCAAACTTCTCCTCTTT  Raphanus sativus var. oleiformis
EX762990       <-- ACACACCTGTTCCTATTATCTTTGCTACACTTTTCAAACTTCTACTCTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV537217       <-- ACACACCTGTTCCTATTATCTTTGCTACACTTTTCAAACTTCTCCTCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973863       <-- ACACACCTGTTCCTATTATCTTTGCTACACTTTTCAAACTTCTACTCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD579677       <-- ACACACCTGTTCCTATTATCTTTGCTACACTTTTCAAACTTCTCCTCTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD949465       <-- ................TATCTTTGCTACACTTTTCAAACTTCTCCTCTTT  Raphanus sativus cv Early Scarlet Globe
FD940450       <-- ..................................CAAACTTCTCCTCTTT  Raphanus sativus var. oleiformis
EY900201       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX761341       --> ACACACCTGTTCCTATTATCTTTGCTACACTTTTCAAACTTCTACTCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541500       --> ACACACCTGTTCCTATTATCTTTGCTACACTTTTCAAACTTCTCCTCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895801       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY902256       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX892934       --> ..................................................  Raphanus sativus var. oleiformis
FD984555       --> ..................................................  Raphanus raphanistrum subsp. landra
EX767146       --> ACACACCTGTTCCTATTATCTTTGCTACACTTTTCAAACTTCTACTCTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728080       --> ACACACCTGTTCCTATTATCTTTGCTACACTTTTCAAACTTCTCCTCT--  Raphanus sativus cv Early Scarlet Globe
EV529953       --> ACACACCTGTTCCTATTATCTTTGCTACACTCTTCAAACTTCTCCTCTTT  Raphanus raphanistrum subsp. maritimus
EX767545       --> ACACACCTGTTCCTc...................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538020       --> ACACACCTGTTCCTATTATCTTTGCTACACTTTTCAAACTTCTCCTCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)

               801    -    851
UN16600        --> ATCCTCTCGAATCCAACAATGATGGAGATGATGAAGGTGACAGCAGGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY440755       <-- ATCCTCTCGAATCCAACAATGATGGAGATG....................
EX757869       <-- ATCCTCTCGAATCCAACAATc.............................
EX763476       <-- ..................................................
FD579456       <-- ATCCTCTCGAATCCAACAATGATGGAGATGATGAAGGTGACAGCAGGAAT
EX756850       <-- ATCCTCTCGAATCCAACAATGATGGAGATGATGAAGGTGACAGCAGGAAT
FD978597       <-- ATCCTCTCGAATCCAACAATGATGGAGATGATGAAGGTGACAGCAGGAAT
EX889140       <-- ATCCTCTCGAATCCAACAATGATGGAGATGATGAAGGTGACAGCAGGAAT
EW723473       <-- ATCCTCTCGAATCCAACAATGATGGAGATGATGAAGGTGACAGCAGGAAT
EY932640       <-- ATCCTCTCGAATCCAACAATGATGGAGATGATGAAGGTGACAGCAGGAAT
FD988688       <-- ATCCTCTCGAATCCAACAATGATGGAGATGATGAAGGTGACAGCAGGAAT
FD541812       <-- ATCCTCTCGAATCCAACAATGATGGAGATGATGAAGGTGACAGCAGGAAT
EV525131       <-- ATCCTCTCGAATCCAACAATGATGGAGATGATGAAGGTGACAGCAGGAAT
FD939139       <-- ATCCTCTCGAATCCAACGATGATGGAGATGATGAAGGTGACAGCAGGAAT
EX762990       <-- ATCCTCTCGAATCCAACAATGATGGAGATGATGAAGGTGACAGCAGGAAT
EV537217       <-- ATCCTCTCGAATCCAACAATGATGGAGATGATGAAGGTGACAGCAGGAAT
FD973863       <-- ATCCTCTCGAATCCAACAATGATGGAGATGATGAAGGTGACAGCAGGAAT
FD579677       <-- ATCCTCTCGAATCCAACAATGATGGAGATGATGAAGGTGACAGCAGGAAT
FD949465       <-- ATCCTCTCAAATCCAACAATGATGGAGATGATGAAGGTGACAGCAGGAAT
FD940450       <-- ATCCTCTCGAATCCAACAATGATGGAGATGATGAAGGTGACAACAGGAAT
EY900201       <-- ..................................................
EX761341       --> ATCCTCTC..........................................
EV541500       --> ATCCTCTCGAATCCAACAATGATGGAGATG....................
EY895801       --> ..................................................
EY902256       --> ..................................................
EX892934       --> ..................................................
FD984555       --> ..................................................
EX767146       --> ATCCTCT...........................................
EW728080       --> ATCCTCTCGAATCCAACAATGATGG.........................
EV529953       --> ATCCTCTCGAATCCAACAATGATGGAGATG....................
EX767545       --> ..................................................
FD538020       --> ATCCTCTCGAATCCAACAATGATGGAGATG....................

               851    -    901
UN16600        --> AAGATTGGTCATGGCACAAGCCATGGATGAAGAAGATAAGTCAAGCCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY440755       <-- ..................................................
EX757869       <-- ..................................................
EX763476       <-- ..................................................
FD579456       <-- AAGATTGGTCATGGCACAAGCCATGGATGAAGAAGATAAGTCAAGCCCTT
EX756850       <-- AAGATTGGTCATGGCACAAGCCATGGATGAAGAAGATAAGTCAAGCCCTT
FD978597       <-- AAGATTGGTCATGGCACAAGCCATGGATGAAGAAGATAAGTCAAGCCCTT
EX889140       <-- AAGATTGGTCATGGCACAAGCCATGGATGAAGAAGATAAGTCAAGCCCTT
EW723473       <-- AAGATTGGTCATGGCACAAGCCATGGATGAAGAAGATAAGTCAAGCCCTT
EY932640       <-- AAGATTGGTCATGGCACAAGCCATGGATGA--AAGATAAGTCAAGCCCTT
FD988688       <-- AAGATTGGTCATGGCACAAGCCATGGATGAAGAAGATAAGTCAAGCCCTT
FD541812       <-- TAGATTGGTCATGGCACAAGCCATGGATGAAGAAGATAAGTCAAGTCTTT
EV525131       <-- AAGATTGGTCATGGCACAAGCCATGGATGAAGAAGATAAGTCAAGCCCTT
FD939139       <-- AAGATTGGTCATGGCACAAGCCATGGATGAAGAAGATAAGTCAAGCCCTT
EX762990       <-- AAGATTGGTCATGGCACAAGCCATGGATGAAGAAGATAAGTCAAGCCCTT
EV537217       <-- TAGATTGGTCATGGCACAAGCCATGGATGAAGAAGATAAGTCAAGTCCTT
FD973863       <-- AAGATTGGTCATGGCACAAGCCATGGATGAAGAAGATAAGTCAAGCCCTT
FD579677       <-- AAGATTGGTCATGGCACAAGCCATGGATGAAGAAGATAAGTCAAGCCCTT
FD949465       <-- AAGATTGGTCATGGCACAAGCCATGGATGAAGAGGATAAGTCAAGCCCTT
FD940450       <-- AAGATTGGTCATGGCACAAGCCATGGATGAAGAAGATAAGTCAAGCCCTT
EY900201       <-- ..................................................
EX761341       --> ..................................................
EV541500       --> ..................................................
EY895801       --> ..................................................
EY902256       --> ..................................................
EX892934       --> ..................................................
FD984555       --> ..................................................
EX767146       --> ..................................................
EW728080       --> ..................................................
EV529953       --> ..................................................
EX767545       --> ..................................................
FD538020       --> ..................................................

               901    -    951
UN16600        --> TAAAATAAGCGTTCTGATTCACAGTAACACCAAAAACAGCTGTGAAAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY440755       <-- ..................................................
EX757869       <-- ..................................................
EX763476       <-- ..................................................
FD579456       <-- TAAAATAAGCGTTCTGATTCACAGTAACACCAAAAACAGCTGTGAAAGCC
EX756850       <-- TAAAATAAGCGTTCTGATTCACAGTAACACCAAAAACAGCTGTGAAAGCC
FD978597       <-- TAAAATAAGCGTTCTGATTCACAGTAACACCAAAAACAGCTGTGAAAGCC
EX889140       <-- TAAAATAAGCGTTCTGATTCACAGTAACACCAAAAACAGCTGTGAAAGCC
EW723473       <-- TAAAATAAGCGTTCTGATTCACAGTAACACCAAAAACAGCTGTGAAAGCC
EY932640       <-- TAAAATAAGCGTTCTGATTCACAGTAACACCAAAAACAGCTGTGAAAGCC
FD988688       <-- TAAAATAAGCGTTCTGATTCACAGTAACACCAAAAACAGCTGTGAAAGCC
FD541812       <-- TAAAATAAGCGTTCTGATTCACAGTAACACCAAAAACAGCTGTGAAAGCC
EV525131       <-- TAAAATAAGCGTTCTGATTCACAGTAACACCAAAAACAGCTGTGAAAGCC
FD939139       <-- TAAAATAAGCGTTCTGATTCACAGTAACACCAAAAACAGCTGTGAAAGCC
EX762990       <-- TAAAATAAGCGTTCTGATTCACAGTAACACCAAAAACAGCTGTGAAAGCC
EV537217       <-- TAAAATAAGCGTTCTGATTCACAGTAACACCAAAAACAGCTGTGAAAGCC
FD973863       <-- TAAAATAAGCGTTCTGATTCACAGTAACACCAAAAACAGCTGTGAAAGCC
FD579677       <-- TAAAATAAGCGTTCTGATTCACAGTAACACCAAAAACAGCTGTGAAAGCC
FD949465       <-- TAAAATAAGCGTTCTGATTCACAGTAACACCAAAAACAGCTGTGAAAGCC
FD940450       <-- TAAAATAAGCGTTCTGATTCACAGTAACACCAAAAACAGCTGTGAAAGCC
EY900201       <-- ..................................................
EX761341       --> ..................................................
EV541500       --> ..................................................
EY895801       --> ..................................................
EY902256       --> ..................................................
EX892934       --> ..................................................
FD984555       --> ..................................................
EX767146       --> ..................................................
EW728080       --> ..................................................
EV529953       --> ..................................................
EX767545       --> ..................................................
FD538020       --> ..................................................

               951    -   1001
UN16600        --> ACCCACCAAAAGCCTCTTAGTCCAAGAGAAGGTTTGCTTGTTTTGCTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY440755       <-- ..................................................  Raphanus sativus cv GSK3-1
EX757869       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763476       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD579456       <-- ACTCACCAAAAGCCTCTTAGTCCAAGAGAAGGTTTGCTTGTTCTGCTCCA  Raphanus sativus cv Rat-Tail Radish #3870
EX756850       <-- ACCCACCAAAAGCCTCTTAGTCCAAGAGAAGGTTTGCTTGTTTTGATCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978597       <-- ACCCACCAAAAGCCTCTTAGTCCAAGAGAAGGTTTGCTTGTTTTGCTCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX889140       <-- ACCCACCAAAAGCCTCTTAGTCCAAGAGAAGGTTTGCTTGTTCTGCTCCA  Raphanus sativus var. oleiformis
EW723473       <-- ACCCACCAAAAGCCTCTTAGTCCAAGAGAAGGTTTGCTTGTTCTGCTCCA  Raphanus sativus cv Early Scarlet Globe
EY932640       <-- ACCCACCAAAAGCCTCTTAGTCCAAGAGAAGGTTTGCTTGTTCTGCTCCA  Raphanus sativus var. oleiformis
FD988688       <-- ACCCACCAAAAGCCTCTTAGTCCAAGAGAAGGTTTGCTTGTTTTGCTCCA  Raphanus raphanistrum subsp. landra
FD541812       <-- ACCCACCAAAAGCCTCTCAGTCCAAGAGAAGGTTTGCTTGTTTTGCTCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV525131       <-- ACCCACCATAAGCCTCTTAGTCCAAGAGAAGGTTTGCTTGTTTTGCTCCA  Raphanus raphanistrum subsp. maritimus
FD939139       <-- ACCCACCAAAAGCCTCTTAGTCCAAGAGAAGGTTTGTTTGTTCTGCTCCA  Raphanus sativus var. oleiformis
EX762990       <-- ACCCACCAAAAGCCTCTTAGTCCAAGAGAAGGTTTGCTTGTTTTGCTCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV537217       <-- ACCCACCAAAAGCCTCTCAGTCCAAGAGAAGGTTTGCTTGTTTTGCTCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973863       <-- ACCCACCAAAAGCCTCTTAGTCCAAGAGAAGGTTTGCTTGTTTTGCTCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD579677       <-- ACCCACCAAAAGCCTCTTAGTCCAAGAGAAGGTTTGCTTGTTCTGCTCCA  Raphanus sativus cv Rat-Tail Radish #3870
FD949465       <-- ACCCACCAAAAGCCTCTTAGTCCAAGAGAAGGTTTGCTTGTTCTGCTCCA  Raphanus sativus cv Early Scarlet Globe
FD940450       <-- ACCCACCAAAAGCCTCTTAGTCCAAGAGAAGGTTTGCTTGTTCTGCTCCA  Raphanus sativus var. oleiformis
EY900201       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX761341       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541500       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895801       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY902256       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX892934       --> ..................................................  Raphanus sativus var. oleiformis
FD984555       --> ..................................................  Raphanus raphanistrum subsp. landra
EX767146       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728080       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV529953       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX767545       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538020       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               1001   -   1051
UN16600        --> AGCGGAGAAGAAAGAGATGGGACAGATGAAAAGAGTAGCGATGGCTTGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY440755       <-- ..................................................  Raphanus sativus cv GSK3-1
EX757869       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763476       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD579456       <-- AGCGGAGAAGAAAGAGATGGGACAGATGAAAAGAGTAGCGATGGCTTGAC  Raphanus sativus cv Rat-Tail Radish #3870
EX756850       <-- AGCGGAGAAGAAAGAGATGGGACAGATGAAGAGAGTAGCGATAGCTTGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978597       <-- AGCGGAGAAGAAAGAGATGGGACAGATGAAGAGAGTAGCGATAGCTTGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX889140       <-- AGCGGAGAAGAAAGAGATGGGACAGATGAAAAGAGTAGCGATGGCTTGAC  Raphanus sativus var. oleiformis
EW723473       <-- AGCGGAGAAGAAAGAGATGGGACAGATGAAAAGAGTAGCGATGGCTTGAC  Raphanus sativus cv Early Scarlet Globe
EY932640       <-- AGCGGAGAAGAAAGAGATGGGACAGATGAAAAGAGTAGCGATGGCTTGAC  Raphanus sativus var. oleiformis
FD988688       <-- AGCGGAGAAGAAAGAGATGGGACAGATGAAGAGAGTAGCGATGGCTTGAC  Raphanus raphanistrum subsp. landra
FD541812       <-- AGCGGAGAAGAAAGAGATGGGACAGATGAAGAGAGTAGCGATAGCTTGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV525131       <-- AGCGGAGAAGAAAGAGATGGGACAGATGAAAAGAGTAGCGATGGCTTGAC  Raphanus raphanistrum subsp. maritimus
FD939139       <-- AGCGGAGAAGAAAGAGATGGGACAGATGAAAAGAGTAGCGATGGCTTGAC  Raphanus sativus var. oleiformis
EX762990       <-- AGCGGAGAAGAAAGAGATGGGACAGATGAAGAGAGTAGCGATAGCTTGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV537217       <-- AGCGGAGAAGAAAGAGATGGGACAGATGAAGAGAGTAGCGATAGCTTGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973863       <-- AGCGGAGAAGAAAGAGATGGGACAGATGAAGAGAGTAGCGATAGCTTGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD579677       <-- AGCGGAGAAGAAAGAGATGGGACAGATGAAAAGAGTAGCGATGGCTTGAC  Raphanus sativus cv Rat-Tail Radish #3870
FD949465       <-- AGCGGAGAAGAAAGAGATGGGACAGATGAAAAGAGTAGCGATGGCTTGAC  Raphanus sativus cv Early Scarlet Globe
FD940450       <-- AGCGGAGAAGAAAGAGATGGGACAGATGAAAAGAGTAGCGATGGCTTGAC  Raphanus sativus var. oleiformis
EY900201       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX761341       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541500       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895801       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY902256       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX892934       --> ..................................................  Raphanus sativus var. oleiformis
FD984555       --> ..................................................  Raphanus raphanistrum subsp. landra
EX767146       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728080       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV529953       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX767545       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538020       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               1051   -   1101
UN16600        --> GGTAAACTACGAAGACGGTGGGATTGAGTCCTTCCATGAAAGCAGCTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY440755       <-- ..................................................  Raphanus sativus cv GSK3-1
EX757869       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763476       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD579456       <-- GGTAAACTACGAAcc...................................  Raphanus sativus cv Rat-Tail Radish #3870
EX756850       <-- GGTAAACTACGAAGACAGTGGGGTTGAGTCCTTCCATGAAAGCAGCTTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978597       <-- GGTAAACTACGAAGACAGTGGGGTTGAGTCCTTCCATGAAAGCAGCTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX889140       <-- GGTAAACTACGAAGACGGTGGGATTGAGTCCTTCCATGAAAGCAGCTTTG  Raphanus sativus var. oleiformis
EW723473       <-- GGTAAACTACGAAGACGGTGGGATTAAGTCCTTCCATGAAAGCAGCTTTG  Raphanus sativus cv Early Scarlet Globe
EY932640       <-- GATAAACTACGAAGACGGTGGGATTGAGTCCTTCCATGAAAGCAGCTTTG  Raphanus sativus var. oleiformis
FD988688       <-- GGTAAACTACGAAGACGGTGGGATTGAGTCCTTCCATGAAAGCAGCTTTG  Raphanus raphanistrum subsp. landra
FD541812       <-- GGTAAACTACGAAGACAGTGGGGTTGAGTCCTTCCATGAAAGCAGCTTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV525131       <-- GGTAAACTACGAAGACGGTGGGATTGAGTCCTTCCATGAAAGCAGCTTTG  Raphanus raphanistrum subsp. maritimus
FD939139       <-- GGTAAACTACGAAGACGGTGGGATTGAGTCCTTCCATGAAAGCAGCTTTG  Raphanus sativus var. oleiformis
EX762990       <-- GGTAAACTACGAAGACAGTGGGGTTGAGTCCTTCCATGAAAGCAGCTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV537217       <-- GGTAAACTACGAAGACAGTGGGGTTGAGTCCTTCCATGAAAGCAGCTTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973863       <-- GGTAAGCTACGAAGACAGTGGGGTTGAGTCCTTCCATGAAAGCAGCTTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD579677       <-- GGTAAACTACGAAGACGGTGGGATTGAGTCCTTCCATGAAAGCAGCTTTG  Raphanus sativus cv Rat-Tail Radish #3870
FD949465       <-- GGTAAACTACGAAGACGGTGGGATTGAGTCCTTCCGTGAAAGCAGCTTTG  Raphanus sativus cv Early Scarlet Globe
FD940450       <-- GGTAAACTACGAAGACGGTGGGATTGAGTCCTTCCATGAAAGCAGCTTTG  Raphanus sativus var. oleiformis
EY900201       <-- ............AGACGGTGGGATTGAGTCCTTCCATGAAAGCAGCTTTG  Raphanus raphanistrum subsp. maritimus
EX761341       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541500       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895801       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY902256       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX892934       --> ..................................................  Raphanus sativus var. oleiformis
FD984555       --> ..................................................  Raphanus raphanistrum subsp. landra
EX767146       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728080       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV529953       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX767545       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538020       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               1101   -   1151
UN16600        --> GTGAAGAGTGCAACTCCTGCAGATGTAAACTGTAGCAGCACTAACGCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY440755       <-- ..................................................  Raphanus sativus cv GSK3-1
EX757869       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763476       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD579456       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX756850       <-- GTGAAGAGTGCAACTCCTGCAGATGTGAACTGTAGCAGCACTAACGCCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978597       <-- GTGAAGAGTGCGACTCCTGCAGATGTGAACTGTAGCAGCACTAACGCCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX889140       <-- GTGAAGAGTGCAACTCCTGCAGATGTAAACTGTAGCAGCACTAACGCCAT  Raphanus sativus var. oleiformis
EW723473       <-- GTGAAGAGTGCAACTCCTGCAGATGTAAACTGTAGCAGCACTAACGCCAT  Raphanus sativus cv Early Scarlet Globe
EY932640       <-- GTGAAGAGTGCAACTCCTGCAGATGTAAACTGTAGCAGCACTAACGCCAT  Raphanus sativus var. oleiformis
FD988688       <-- GTGAAGAGTGCAACTCCTGCAGATGTAAACTGTAGCAGCACTAACGCCAT  Raphanus raphanistrum subsp. landra
FD541812       <-- GTGAAGAGTGCAACTCCTGCAGATGTGAACTGTAGCAGCACTAACGCCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV525131       <-- GTGAAGAGTGCAACTCCTGCAGATGTAAACTGTAGCAGCACTAACGCCAT  Raphanus raphanistrum subsp. maritimus
FD939139       <-- GTGAAGAGTGCAACTCCTGCAGATGTAAACTGTAGCAGCACTAACGCCAT  Raphanus sativus var. oleiformis
EX762990       <-- GTGAAGAGTGCAACTCCTGCAGATGTGAACTGTAGCAGCACTAACGCCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV537217       <-- GTGAAGAGTGCAACTCCTGCAGATGTGAACTGTAGCAGCACTAACGCCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973863       <-- GTGAAGAGTGCAACTCCTGCAGATGTGAACTGTAGCAGCACTAACGCCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD579677       <-- GTGAAGAGTGCAACTCCTGCAGATGTAAACTGTAGCAGCACTAACGCCAT  Raphanus sativus cv Rat-Tail Radish #3870
FD949465       <-- GTGAAGAGTGCAACTCCTGCAGATGTAAACTGTAGCAGCACTAACGCCAT  Raphanus sativus cv Early Scarlet Globe
FD940450       <-- GTGAAGAGTGCAACTCCTGCAGATGTAAACTGTAGCAGCACTAACGCCAT  Raphanus sativus var. oleiformis
EY900201       <-- GTGAAGAGTGCAACTCCTGCAGATGTAAACTGTAGCAGCACTAACGCCAT  Raphanus raphanistrum subsp. maritimus
EX761341       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541500       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895801       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY902256       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX892934       --> ..................................................  Raphanus sativus var. oleiformis
FD984555       --> ..................................................  Raphanus raphanistrum subsp. landra
EX767146       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728080       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV529953       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX767545       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538020       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               1151   -   1201
UN16600        --> CACCGGCTTGTACTTCTCCATCTCCATCTCTTGCGCACCTTTCTCTCTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY440755       <-- ..................................................  Raphanus sativus cv GSK3-1
EX757869       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763476       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD579456       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX756850       <-- CACCGGCTTGTACTTCTCCATCTCCATCTCTTGCGCACCTTTCTCTCTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978597       <-- CACCGGCTTGTACTTCTCCATCTCCATCTCTTGCGCACCTTTCTCTCTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX889140       <-- CACCGGCTTGTACTTCTCCATCTCCATCTCTTGCGCACCTTTCTCTCTAT  Raphanus sativus var. oleiformis
EW723473       <-- CACCGGCTTGTACTTCT.................................  Raphanus sativus cv Early Scarlet Globe
EY932640       <-- CACCGGCTTGTACTTCTCCATCTCCATCTCTTGCGCACCTTTCTCTCTAT  Raphanus sativus var. oleiformis
FD988688       <-- CACCGGCTTGTATTTCTCCATCTCCATCTCTTGCGCACTTTTCTCCCTAT  Raphanus raphanistrum subsp. landra
FD541812       <-- CACCGGCTTGTACTTCTCCATCTCCATCTCTTGCGCACCTTTCTCTCTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV525131       <-- CACCGGCTTGTACTTCTCCATCTCCATCTCTTGCGCACCTTTCTCTCTAT  Raphanus raphanistrum subsp. maritimus
FD939139       <-- CACCGGCTTGTACTTCTCCATCTCCATCTCTTGCGCACCTTTCTCTCTAT  Raphanus sativus var. oleiformis
EX762990       <-- CACCGGCTTGTACTTCTCCATCTCCATCTCTTGCGCACCTTTCTCTCTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV537217       <-- CACCGGCTTGTACTTCTCCATCTCCATCTCTTGCGCACCTTTCTCTCTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973863       <-- CACCGGCTTGTACTTCTCCATCTCCATCTCTTGCGCACCTTTCTCTCTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD579677       <-- CACCGGCT..........................................  Raphanus sativus cv Rat-Tail Radish #3870
FD949465       <-- CACCGGCTTGTACTTCTCCATCTCCATCTCTTGCGCACCTTTCTCTCTAT  Raphanus sativus cv Early Scarlet Globe
FD940450       <-- CACCGGCTTGTACTTCTCCATCTCCATCTCTTGCGCACCTTTCTCTCTAT  Raphanus sativus var. oleiformis
EY900201       <-- CACCGGCTTATACTTCTCCATCTCCATCTCTTGCGCACCTTTCTCTCTAT  Raphanus raphanistrum subsp. maritimus
EX761341       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541500       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895801       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY902256       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX892934       --> ..................................................  Raphanus sativus var. oleiformis
FD984555       --> ..................................................  Raphanus raphanistrum subsp. landra
EX767146       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728080       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV529953       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX767545       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538020       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               1201   -   1251
UN16600        --> CTCTCTTTCTTATTTTAAGATTTAATGTATCTCACTAC..........
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY440755       <-- ................................................  Raphanus sativus cv GSK3-1
EX757869       <-- ................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763476       <-- ................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD579456       <-- ................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX756850       <-- CTCTCTTTCTTATTTTAAGATTTAATGTcc..................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978597       <-- CTCTCTTTCTTATTTTAAGATTTAATGTcc..................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX889140       <-- TTCTCTT--TTATTTTAAGATTTAATGTATCTCACTACaaatc.....  Raphanus sativus var. oleiformis
EW723473       <-- ................................................  Raphanus sativus cv Early Scarlet Globe
EY932640       <-- TTCTCTTTCTTATTTTAAGATTTAATGTATCTCACTACaaatgcacc.  Raphanus sativus var. oleiformis
FD988688       <-- CTCTCTTTCTTATTTTAAGATTTAATGTATCTTACTACaaatcc....  Raphanus raphanistrum subsp. landra
FD541812       <-- CTCTCTTTCTTATTTTAAGATTTAATGTcc..................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV525131       <-- TTCTCTTTCTTATTTTAAGATTTAATGTATCTCACTACaaatgaatcc  Raphanus raphanistrum subsp. maritimus
FD939139       <-- TTCTCTTTCTTATTTTAAGATTTAATGTATCTCACTACaaatcc....  Raphanus sativus var. oleiformis
EX762990       <-- CTCTCTTTCTTATTTTAAGATTTAATGTcc..................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV537217       <-- CTCTCTTTCTTATTTTAAGATTTAATGTcc..................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973863       <-- CTCTCTTTCTTATTTTAAGATTTc........................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD579677       <-- ................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD949465       <-- TTCTCTTTCTTATTTTAAGATTTAATGTATCTCACTACcc........  Raphanus sativus cv Early Scarlet Globe
FD940450       <-- t...............................................  Raphanus sativus var. oleiformis
EY900201       <-- TTCTCTTTCTTATTTTAAGATTTAATGTATCTCACTACccc.......  Raphanus raphanistrum subsp. maritimus
EX761341       --> ................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541500       --> ................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895801       --> ................................................  Raphanus raphanistrum subsp. maritimus
EY902256       --> ................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX892934       --> ................................................  Raphanus sativus var. oleiformis
FD984555       --> ................................................  Raphanus raphanistrum subsp. landra
EX767146       --> ................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728080       --> ................................................  Raphanus sativus cv Early Scarlet Globe
EV529953       --> ................................................  Raphanus raphanistrum subsp. maritimus
EX767545       --> ................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538020       --> ................................................  Raphanus raphanistrum subsp. raphanistrum (MS)