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Alignment for radish unigene UN16644

               1      -     51
UN16644        --> GGGTCTCGGGTTTGGCGTTTCAATTTCAAACACCACTAGAAAGAGTCGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD952347       <-- ..................................................
FD974722       <-- ..................................................
FD952628       <-- ..................................................
FD959827       <-- ..................................................
EV544269       <-- ..................................................
FD975109       <-- ..................................................
FD963547       --> GGGTCTCGGGTTTGGCGTTTCAATTTCAAACACCACTAGAAAGAGGCGAA
EV538868       --> .........................ggAAACACCACTAGAAAGAGTAAAA
FD535515       --> ..................................................
FD956471       --> ..................................................
FD956825       --> ..................................................
FD978484       --> ..................................................
FD988419       --> ..................................................
FD978958       --> ..................................................

               51     -    101
UN16644        --> AAAAACGTTATCTATCCCCTTGCGAACGAGATACGAGACGTT-AGTGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD952347       <-- ..................................................
FD974722       <-- ..................................................
FD952628       <-- ..................................................
FD959827       <-- ..................................................
EV544269       <-- ..................................................
FD975109       <-- ..................................................
FD963547       --> AAAAACGTTATCTATCCCCTTGCGAACGAGATACGAGACGTT-AGTGAAG
EV538868       --> AAAAACGTTATCTATCCCCTTGCGAACGAGATACGAGACGTT-AGTGAAG
FD535515       --> ...................ggGCGAACGAGATACGAGACGTT-AGTGAAG
FD956471       --> ...................ggGCGAACGAGATACGAGACGTT-AGTGAAG
FD956825       --> ...................ggGCGAACGAGGTACGAGACGTT-AGTGAAG
FD978484       --> ..........................CGATATACGAAACGTTTAGTGAAG
FD988419       --> ..................................................
FD978958       --> ..................................................

               101    -    151
UN16644        --> AAGACCGAAATGGGAGACGACAGGCTGGATCTCGAGCTCTCCGATGAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD952347       <-- ..................................................
FD974722       <-- ..................................................
FD952628       <-- ..................................................
FD959827       <-- ..................................................
EV544269       <-- ..................................................
FD975109       <-- ..................................................
FD963547       --> AAGACCGAAATGGGAGACGACAGGCTGGATCTCGAGCTCTCCGATGAGGT
EV538868       --> AAGACCGCAATGGGAGACGACAGGCTGGATCTCGAGCTCTCCGATGAGGT
FD535515       --> AAGACCGAAATGGGAGACGACAGGCTGGATCTCGAGCTCTCCGATGAGGT
FD956471       --> AAGACCGAAATGGGAGACGACAGGCTGGATCTCGAGCTCTCCGATGAGGT
FD956825       --> AAGACCGAAATGGGAGACGACAGGCTGGATCTCGAGCTCTCCGATGAGGT
FD978484       --> AAGACCGCAATGGGAGACGACAGGCTGGATCTCGAGCTCTCCGATGAGGT
FD988419       --> ..................................................
FD978958       --> ..................................................

               151    -    201
UN16644        --> TCTGTCGGTGATTCCGATGGATCCTTTCGAGCAGCTGGATCTCGCGAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD952347       <-- ..................................................
FD974722       <-- ..................................................
FD952628       <-- ..................................................
FD959827       <-- ..................................................
EV544269       <-- ..................................................
FD975109       <-- ..................................................
FD963547       --> TCTGTCGGTGATTCCGATGGATCCTTTCGAGCAGCTGGATCTCGCGAGGA
EV538868       --> TCTGTCGGTGATTCCGATGGATCCTTTCGAGCAGCTGGATCTCGCGAGGA
FD535515       --> TCTGTCGGTGATTCCGATGGATCCTTTCGAGCAGCTGGATCTCGCGAGGA
FD956471       --> TCTGTCGGTGATTCCGATGGATCCTTTCGAGCAGCTGGATCTCGCGAGGA
FD956825       --> TCTGTCGGTGATTCCGATGGATCCTTTCGAGCAGCTGGATCTCGCGAGGA
FD978484       --> TCTGTCGGTGATTCCGATGGATCCTTTCGAGCAGCTGGATCTCGCGAGGA
FD988419       --> ..................................................
FD978958       --> ..................................................

               201    -    251
UN16644        --> AGATCACCTCAATGGCGATAGCTTCGAGGGTCTCGAATCTCGACTCCGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD952347       <-- ..................................................
FD974722       <-- ..................................................
FD952628       <-- ..................................................
FD959827       <-- ..................................................
EV544269       <-- ..................................................
FD975109       <-- ..................................................
FD963547       --> AGATCACCTCAATGGCGATAGCTTCGAGGGTCTCGAATCTCGACTCCGAG
EV538868       --> AGATCACCTCAATGACGATAGCTTCGAGGGTCTCGAATCTCGACTCAGAG
FD535515       --> AGATCACCTCAATGGCGATAGCTTCGAGGGTCTCGAATCTCGACTCCGAG
FD956471       --> AGATCACCTCAATGGCGATAGCTTCGAGGGTCTCGAATCTCGACTCCGAG
FD956825       --> AGATCACCTCAATGGCGATAGCTTCGAGGGTCTCGAATCTCGACTCCGAG
FD978484       --> AGATCACCTCAATGGCGATAGCTTCGAGGGTCTCGAATCTCGACTCCGAG
FD988419       --> ..........................................gCTCAGAG
FD978958       --> ..................................................

               251    -    301
UN16644        --> GTGGTTGAACTGAGACAGAAGCTTCAGGGTAAAGAAACTGCTGTCCGCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD952347       <-- ..................................................
FD974722       <-- ..................................................
FD952628       <-- ..................................................
FD959827       <-- ..................................................
EV544269       <-- ..................................................
FD975109       <-- ..................................................
FD963547       --> GTGGTTGAACTGAGACAGAAGCTTCAGGGTAAAGAAACTGCTGTCCGCGA
EV538868       --> GTGGTTGAATTGAGACAGAAGCTTCAGGGTAAAGAAACTGTTGTCCGCGA
FD535515       --> GTGGTTGAACTGAGACAGAAGCTTCAGGGTAAAGAAACTGCTGTCCGCGA
FD956471       --> GTGGTTGAACTGAGACAGAAGCTTCAGGGTAAAGAAACTGCTGTCCGCGA
FD956825       --> GTGGTTGAACTGAGACAGAAGCTTCAGGGTAAAGAAACTGCTGTCCGCGA
FD978484       --> GTGGTTGAATTGAGACAGAAGCTTCAGGGTAAAGAAACTGTTGTCCGTGA
FD988419       --> GTGGTTGAACTGAGACAGAAGATTCAGGGTCAAGAAACTGTTGTCCGCGA
FD978958       --> ..................................................

               301    -    351
UN16644        --> GCTCGAGGAGAAGGCATCTCGCCTCGAGAGAGACCGTCGCGAAGCTGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD952347       <-- ..................................................
FD974722       <-- ..................................................
FD952628       <-- ..................................................
FD959827       <-- ..................................................
EV544269       <-- ..................................................
FD975109       <-- ..................................................
FD963547       --> GCTCGAGGAGAAGGCATCTCGCCTCGAGAGAGACCGTCGCGAAGCTGATT
EV538868       --> GCTCGAGGAGAAGGCGTCTCGCCTCGAGAGAGACCGTCGCGAAGCTGATT
FD535515       --> GCTCGAGGAGAAGGCATCTCGCCTCGAGAGAGACCGTCGCGAAGCTGATT
FD956471       --> GCTCGAGGAGAAGGCATCTCGCCTCGAGAGAGACCGTCGCGAAGCTGATT
FD956825       --> GCTCGAGGAGAAGGCATCTCGCCTCGAGAGAGACCGTCGCGAAGCTGATT
FD978484       --> GCTCGAGGAGAAGGCGTCTCGCCTCGAGAGAGACCGTCGCGAAGCTGATT
FD988419       --> GCTCGAGGAGAAGACGTCTCGCCTCGAGAGAGACCGTCGCGAAGCTGATT
FD978958       --> ..................................................

               351    -    401
UN16644        --> CGAGGTTGAAGACCGTCCTCGAAGAGAATATGATCCTGACAAAGGAGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD952347       <-- ..................................................
FD974722       <-- ..................................................
FD952628       <-- ..................................................
FD959827       <-- ..................................................
EV544269       <-- ..................................................
FD975109       <-- ..................................................
FD963547       --> CGAGGTTGAAGACCGTCCTCGAAGAGAATATGATCCTGACAAAGGAGAAG
EV538868       --> CGAGGCTAAAGACCGTCCTCGAAGAGAATATGATTCTGACAAAGGAGAAG
FD535515       --> CGAGGTTGAAGACCGTCCTCGAAGAGAATATGATCCTGACAAAGGAGAAG
FD956471       --> CGAGGTTGAAGACCGTCCTCGAAGAGAATATGATCCTGACAAAGGAGAAG
FD956825       --> CGAGGTTGAAGACCGTCCTCGAAGAGAATATGATCCTGACAAAGGAGAAG
FD978484       --> CGAGGCTAAAGACCGTCCTCGAAGAGAATATGATCCTGACAAAGGAGAAG
FD988419       --> CGAGGTTGAAGACCGTCCTCGAATAGAATATGATCCTGACAAAGGAGAAG
FD978958       --> ..................................................

               401    -    451
UN16644        --> GATTCACTGGCAATGACTGTAACGAAACTAACTCGTGATTTGGCTAAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD952347       <-- GATTCACTGGCAGTGACTGTAACGAAACTAACTCGTGATTTGGCTAAGCT
FD974722       <-- ..........cgATGACTGTAACAAAACTCACTCGTGATTTG-CTAAGCT
FD952628       <-- .............TGACTGTAACGAAACTAACTCGTGATTTGGCTAAGCT
FD959827       <-- ..................................................
EV544269       <-- ..................................................
FD975109       <-- ..................................................
FD963547       --> GATTCACTGGCAATGACTGTAACGAAACTAACTCGTGATTTGGCTAAGCT
EV538868       --> GATTCACTGGCAATGACTGTAACAAAACTCACTCGTGATTTGGCTAAGCT
FD535515       --> GATTCACTGGCAATGACTGTAACGAAACTAACTCGTGATTTGGCTAAGCT
FD956471       --> GATTCACTGGCAGTGACTGTAACGAAACTAACTCGTGATTTGGCTAAGCT
FD956825       --> GATTCACTGGCAATGACTGTAACGAAACTAACTCGTGATTTGGCTAAGCT
FD978484       --> GATTCACTGGCGATGACTGTAACAAAACTCACTCGTGATTTGGCTAAGCT
FD988419       --> GATTCACTGGCAATGACTGTAACGAAACTAACTCGTGATTTGGCTAAGCT
FD978958       --> ..................................................

               451    -    501
UN16644        --> GGAGACATTCAAGCGGCAGTTAATCAAGTCTTTGAGCGACGAGAGTGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD952347       <-- GGAGACATTCAAGCGGCAGTTAATCAAGTCTTTGAGCGACGAGAGTGCTC
FD974722       <-- GGAGACATTCAAGCGGCAGTTAATCAAGTCTTTGAGCGACGAGAGTGCTC
FD952628       <-- GGAGACATTCAAGCGGCAGTTAATCAAGTCTTTGAGCGACGAGAGTGCTC
FD959827       <-- ..................................................
EV544269       <-- ..................................................
FD975109       <-- ..................................................
FD963547       --> GGAGACATTCAAGCGGCAGTTAATCAAGTCTTTGAGCGACGAGAGTGTTC
EV538868       --> GGAGACATTCAAGCGGCAGTTAATCAAATCTTTGAGCGACGAGAGTGCTC
FD535515       --> GGAGACATTCAAGCGGCAGTTAATCAAGTCTTTGAGCGACGAGAGTGCTC
FD956471       --> GGAGACATTCAAGCGGCAGTTAATCAAGTCTTTGAGCGACGAGAGTGCTC
FD956825       --> GGAGACATTCAAGCGGCAGTTAATCAAGTCTTTGAGCGACGAGAGTGCTC
FD978484       --> GGAGACATTCAAGCGGCAGTTAATCAAGTCTTTGAGCGACGAGAGTGCTC
FD988419       --> GGAGACATTCAAGCGGCAGTTAATCAAATCTCTGAGCGACGAGAGTGCTC
FD978958       --> ..................................................

               501    -    551
UN16644        --> CTCCTCAAACAGAGCCTGTTGATATAAAAGCATGCGACCAGTCAAGTATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD952347       <-- CTCCTCAAACAGAGCCTGTTGATATAAAAGCATGCGACCAGTCAAGTATT
FD974722       <-- CTCCTCAAACAGAGCCTGTTGATATAAAGGCATGCGACCAGTCAAGTATT
FD952628       <-- CTCCTCAAACAGAGCCTGTTGATATAAAAGCATGCGACCAGTCAAGTATT
FD959827       <-- ..................................................
EV544269       <-- ..................................................
FD975109       <-- ..................................................
FD963547       --> CTCCTCAAACAGAGCCTGTTGATATAAAAGCATGCGACCAGTCAAGTATT
EV538868       --> CTCCTCAAACAGAGGCTGTTGATATAAAGGCATGCGACCAGTCAAGTATT
FD535515       --> CTCCTCAAACAGAGCCTGTTGATATAAAAGCATGCGACCAGTCAAGTATT
FD956471       --> CTCCTCAAACAGAGCCTGTTGATATAAAAGCATGCGACCAGTCAAGTATT
FD956825       --> CTCCTCAAACAGAGCCTGTTGATATAAAAGCATGCGACCAGTCAAGTATT
FD978484       --> CTCCTCAAACAGAGCCTGTTGATATAAAGGCATGCGACCAGTCAAGTATT
FD988419       --> CTCCTCAAACAGAGCCTGTTGATATAAAAGCATGCGACCAGTCAAGTATT
FD978958       --> ..................................................

               551    -    601
UN16644        --> GGATCAACTGGTTCATATACAGGCAAAG---ATGAAAGGACCAACGTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD952347       <-- GGATCAACTGGTTCATATACAGGCAAAG---ATGAAAGGACCAACGTACA  Raphanus sativus cv Rat-Tail Radish #3870
FD974722       <-- GGATCAACTGGTTCATATACAGGCAAAG---ATGAAAGGACCAACGTACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD952628       <-- GGATCAACTGGTTCATATACAGGCAAAG---ATGAAAGGACCAACGTACA  Raphanus sativus cv Rat-Tail Radish #3870
FD959827       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV544269       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD975109       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD963547       --> GGATCAACTGGTTCATATACAGGCAAAG---ATGAAAGGACCAACGTACA  Raphanus raphanistrum subsp. maritimus
EV538868       --> GTATCAACTGGTTCATATACAGGCAAAG---ATGAAAGGACCAACGTACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD535515       --> GGATCAACTGGTTCATATACAGGCAAAGCAGATGAAAGGACCAACGTACA  Raphanus raphanistrum subsp. maritimus
FD956471       --> GGATCAACTGGTTCATATACAGGCAAAG---ATGAAAGGACCAACGTACA  Raphanus sativus cv Rat-Tail Radish #3870
FD956825       --> GGATCAACTGGTTCATATACAGGCAAAG---ATGAAAGGACCAACGTACA  Raphanus sativus cv Rat-Tail Radish #3870
FD978484       --> GGATCAACTGGTTCATATACAGGCAAAG---ATGAAAGGACCAACGTACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD988419       --> GGATCAACTGGTTCATATACAGGCAAAG---ATGAAAGGGCCAACGTACA  Raphanus raphanistrum subsp. landra
FD978958       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               601    -    651
UN16644        --> TTCATCACACCGTTCTTACAGTGGATCTACCGACATGAACAAATTCTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD952347       <-- TTCATCACACCGTTCTTACAGTGGATCTACCGACATGAACAAATTCTCAA  Raphanus sativus cv Rat-Tail Radish #3870
FD974722       <-- CTCAGCACACCGTTCTTACAGTGGATCTACCGACATGAACAAATTCTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD952628       <-- TTCATCACACCGTTCTTACAGTGGATCTACCGACATGAACAAATTCTCAA  Raphanus sativus cv Rat-Tail Radish #3870
FD959827       <-- ...........................................TTCTCAA  Raphanus raphanistrum subsp. maritimus
EV544269       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD975109       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD963547       --> TTCATCACACCGTTCTTACAGTGGATCTACCGACATGAACAAATTCTCAA  Raphanus raphanistrum subsp. maritimus
EV538868       --> CTCATCACACCGTTCTTACAGTGGATCTTCCGACATGAACAAATTCTCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD535515       --> TTCATCACACCGTTCTTACAGTGGATCTACCGACATGAACAAATTCTCAA  Raphanus raphanistrum subsp. maritimus
FD956471       --> TTCATCACACCGTTCTTACAGTGGATCTACCGACATGAACAAATTCTCAA  Raphanus sativus cv Rat-Tail Radish #3870
FD956825       --> TTCATCACACCGTTCTTACAGTGGATCTACCGACATGAACAAATTCTCAA  Raphanus sativus cv Rat-Tail Radish #3870
FD978484       --> CTCAGCACACCGTTCTTACAGTGGATCTACCGACATGAACAAATTCTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD988419       --> CTCATCACACCGTTCTTACAGTGGATCTACCGACATGAACAAATTCTCAA  Raphanus raphanistrum subsp. landra
FD978958       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               651    -    701
UN16644        --> TGACACCATACATCTCCCCACGCCTCACCCCATCCGCAACACCGAAGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD952347       <-- TGACACCATACATCTCCCCACGCCTCACCCCATCCGCAACACCGAAGATC  Raphanus sativus cv Rat-Tail Radish #3870
FD974722       <-- TGACACCATACATCTCTCCACGCCTTACCCCATCCGCAACACCGAAGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD952628       <-- TGACACCATACATCTCCCCACGCCTCACCCCATCCGCAACACCGAAGATC  Raphanus sativus cv Rat-Tail Radish #3870
FD959827       <-- TGACACCATACATCTCCCCACGCCTCACCCCATCCGCAACACCGAAGATC  Raphanus raphanistrum subsp. maritimus
EV544269       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD975109       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD963547       --> TGACACCATACATCTCCCCACGCCTCACCCCATCCGCAACACCGAAGATC  Raphanus raphanistrum subsp. maritimus
EV538868       --> TGACACCATACATCTCTCCACGCCTCACCCCATCCGCAACACCCAAGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD535515       --> TGACACCATACATCTCCCCACGCCTCACCCCATCCGCAACGCCGAAGATC  Raphanus raphanistrum subsp. maritimus
FD956471       --> TGACACCATACATCTCCCCACGCCTCACCCCATCCGCAACACCGAAGATC  Raphanus sativus cv Rat-Tail Radish #3870
FD956825       --> TGACACCATACATCTCCCCACGCCTCACCCCATCCGCAACACCGAAGATC  Raphanus sativus cv Rat-Tail Radish #3870
FD978484       --> TGACACCATACATCTCTCCACGCCTTACCCCATCCGCAACACCGAAGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD988419       --> TGACACCATACATCTCTCCACGCCTCACCCCATCCGCAACACCGAAGATC  Raphanus raphanistrum subsp. landra
FD978958       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               701    -    751
UN16644        --> ATCTCCACAAGCGTATCCCCTCGAGGCTATTCTGCAGCTGGTTCTCCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD952347       <-- ATCTCCACAAGCGTATCCCCTCGAGGCTATTCTGCAGCTGGTTCTCCCAA
FD974722       <-- ATCTCCACAAGCGTATCCCCTCGAGGCTATTTTGCAGCTGGTTCTCCCAA
FD952628       <-- ATCTCCACAAGCGTATCCCCTCGAGGCTATTCTGCAGCTGGTTCTCCCAA
FD959827       <-- ATCTCCACAAGCGTATCCCCTCGAGGCTATTCTGCAGCTGGTTCTCCCAA
EV544269       <-- .gCTCCCCAAGC-TATCCCCTCGAGGCTATTCTGCAGCTGGTTCTCCCAA
FD975109       <-- ..................................................
FD963547       --> ATCTCCACAAGCGTATCCCCTCGAG-CTATTCTGCAGCTGGTTCTCC--A
EV538868       --> ATCTCCACAAGCGTATCCCCTCGAGGCTATTCTGCAGCTGGTTCTCCCAA
FD535515       --> ATCTCCACAAGCGTATCCCCTCGAG-CTATTCTGCATCTGGTTCTCCCAA
FD956471       --> ATCTCCACAAGCGTATCCCCTCGAGGCTATTCTGCAGCTGGTTCTCCCAA
FD956825       --> ATCTCCACAAGCGTATCCCCTCGAGGCTATTCTGCAGCTGGTTCTCCCAA
FD978484       --> ATCTCCACAAGCGTATCCCCTCGAG-CTATTCTGCAGCTGGTTCTCCCAA
FD988419       --> ATCTCCACAAGCGTAACCCCTCGAGGCTATTCTGCAGCTGGTTCTCCCAA
FD978958       --> ..................................................

               751    -    801
UN16644        --> AAGAACATCCGGTGCAGTTTCTCCCTCCAAGACGACAATCTGGTACCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD952347       <-- AAGAACATCCGGTGCAGTTTCTCCCTCCAAGACGACAATCTGGTACCCTT
FD974722       <-- AAGAACATCCGGTGCAGTTTCTCCCTCGAAGACGACAATCTGGTACCCTT
FD952628       <-- AAGAACATCCGGTGCAGTTTCTCCCTCCAAGACGACAATTTGGTACCCTT
FD959827       <-- AAGAACATCCGGTGCAGTTTCTCCCTCCAAGACGACAATCTGGTACCCTT
EV544269       <-- AAGAACATCCGGTGCAGTTTCTCCCTCCAAGACGACAATCTGGTACCCTT
FD975109       <-- ..................................................
FD963547       --> AAG-ACATCC-GTGCAGTTTCT............................
EV538868       --> AAGAACATCCGGAGCAGTTTCTCCCTCGAAGACGACAATCTGGTACCCTT
FD535515       --> Ag................................................
FD956471       --> AAGAACATCCG-TGCAGTTTCTCCCTCCAAGACGACAATCTGGTACCCTT
FD956825       --> AAGAACATCCCGTGCAGTTTCTCCCTCCA-GACGACAATCTGGTACCCTT
FD978484       --> A-GAACAT..........................................
FD988419       --> AAGAACATCCGGTGCAGTTTCTCCCTCGAAGACGACAATCTGGTACCCTT
FD978958       --> ..................................................

               801    -    851
UN16644        --> CGAGTCAGCAGTCATCAGCTGCTAATTCTCCACCTCGCAACCGTACACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD952347       <-- CGAGTCAGCAGTCATCAGCTGCTAATTCTCCACCTCGCAACCGTACACTC
FD974722       <-- CGAGTCAGCAGTCATCAGCTGCTAATTCTCCACCTCGCAACCGTACACTC
FD952628       <-- CGAGTCAGCAGTCATCAGCTGCTAATTCTCCACCTCGCAACCGTACACTC
FD959827       <-- CGAGTCAGCAGTCATCAGCTGCTAATTCTCCACCTCGCAACCGTACACTC
EV544269       <-- CGAGTCAGCAGTCATCAGCTGCTAATTCTCCACCTCGCAACCGTACACTC
FD975109       <-- ..................................................
FD963547       --> ..................................................
EV538868       --> CGAGTCAGC.........................................
FD535515       --> ..................................................
FD956471       --> CGAGTCAGCAGTCATCAGCTGCTAATTCTC-A-CTCGC-ACCGTACACTC
FD956825       --> CGAGTCAGCAGTCATCAGCTGCTAATTCTCCACCTCGCAcc.........
FD978484       --> ..................................................
FD988419       --> CGAGTCAGCAGTCATCAGCTGCTAATTCTCCACCTCGCAACCGTACACTC
FD978958       --> ..................................................

               851    -    901
UN16644        --> CCAGCTCGTACACCTCGGATGGACGGTAAGGAGTTCTTCAGACAAGCCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD952347       <-- CCAGCTCGTACACCTCGGATGGACGGTAAGGAGTTCTTCAGACAAGCCAG
FD974722       <-- CCAGCTCGTACACCTAGGATGGACGGTAAGGAGTTCTTCAGACAAGCCAG
FD952628       <-- CCAGCTCGTACACCTCGGATGGACGGTAAGGAGTTCTTCAGACAAGCCAG
FD959827       <-- CCAGCTCGTACACCTCGGATGGACGGTAAGGAGTTCTTCAGACAAGCCAG
EV544269       <-- CCAGCTCGTACACCTCGGATGGACGGTAAGGAGTTCTTCAGACAAGCCAG
FD975109       <-- ..................................................
FD963547       --> ..................................................
EV538868       --> ..................................................
FD535515       --> ..................................................
FD956471       --> CCAGCTCGTACAC.....................................
FD956825       --> ..................................................
FD978484       --> ..................................................
FD988419       --> CCAGCTCGTACACCTCGGATGGACGGTAAGGAGTTCTTCAGACAAGCCAG
FD978958       --> ..................................................

               901    -    951
UN16644        --> GAGCCGATTATCATATGAGCAATTCAGTGCCTTCTTAGCTAACATTAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD952347       <-- GAGCCGATTATCATATGAGCAATTCAGTGCCTTCTTAGCTAACATTAAGG
FD974722       <-- GAGCCGATTATCATATGAGCAATTCAGTGCCTTCTTAGCTAACATTAAGG
FD952628       <-- GAGCCGATTATCATATGAGCAATTCAGTGCCTTCTTAGCTAACATTAAGG
FD959827       <-- GAGCCGATTATCATATGAGCAATTCAGTGCCTTTTTAGCTAACATTAAGG
EV544269       <-- GAGCCGATTATCATATGAGCAATTCAGTGCCTTCTTAGCTAACATTAAGG
FD975109       <-- .....................................GCTAACATTAAGG
FD963547       --> ..................................................
EV538868       --> ..................................................
FD535515       --> ..................................................
FD956471       --> ..................................................
FD956825       --> ..................................................
FD978484       --> ..................................................
FD988419       --> GAGCCGATTATCATATGAGCAATTCAGTGCCTTCT...............
FD978958       --> .....................................GCTAACATTAAGG

               951    -   1001
UN16644        --> AACTCAACGCTCAGAAGCAAACCCGAGAGGAAACGTTGAGGAAAGCAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD952347       <-- AACTCAACGCTCAGAAGCAAACCCGAGAGGAAACGTTGAGGAAAGCAGAT
FD974722       <-- AACTCAACGCTCAGAAGCAAACACGAGAGGAAACGTTGAGGAAAGCAGAT
FD952628       <-- AACTCAACGCTCAGAAGCAAACCCGAGAGGAAACGTTGAGGAAAGCAGAT
FD959827       <-- AACTCAACGCTCAGAAGCAAACCCGAGAGGAAACGTTGAGGAAAGCAGAT
EV544269       <-- AACTCAACGCTCAGAAGCAAACCCGAGAGGAAACGTTGAGGAAAGCAGAT
FD975109       <-- AACTCAACGCTCAGAAGCAAACACGAGAGGAAACGTTGAGGAAAGCAGAT
FD963547       --> ..................................................
EV538868       --> ..................................................
FD535515       --> ..................................................
FD956471       --> ..................................................
FD956825       --> ..................................................
FD978484       --> ..................................................
FD988419       --> ..................................................
FD978958       --> AACTCAACGCTCAGAAGCAAACACGAGAGGAAACGTTGAGGAAAGCAGAT

               1001   -   1051
UN16644        --> GAGATATTTGGGGAAGATAACAAAGATCTCTACCTATCTTTCCAAGGTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD952347       <-- GAGATATTTGGGGAAGATAACAAAGATCTCTACCTATCTTTCCAAGGTCT
FD974722       <-- GAGATATTTGGGGAAGATAACAAAGATCTCTACCTATCTTTCCAAGGTCT
FD952628       <-- GAGATATTTGGGGAAGATAACAAAGATCTCTACCTATCTTTCCAAGGTCT
FD959827       <-- GAGATATTTGGGGAAGATAACAAAGATCTCTACCTATCTTTCCAAGGTCT
EV544269       <-- GAGATATTTGGGGAAGATAACAAAGATCTCTACCTATCTTTCCAAGGTCT
FD975109       <-- GAGATATTTGGGGAAGATAACAAAGATCTCTACCTATCTTTCCAAGGTCT
FD963547       --> ..................................................
EV538868       --> ..................................................
FD535515       --> ..................................................
FD956471       --> ..................................................
FD956825       --> ..................................................
FD978484       --> ..................................................
FD988419       --> ..................................................
FD978958       --> GAGATATTTGGGGAAGATAACAAAGATCTCTACCTATCTTTCCAAGGTCT

               1051   -   1101
UN16644        --> TCTCAACAGAAACATGCGTTAAAAACTTTACGAGTCTTGAATCTCTCGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD952347       <-- TCTCAACAGAAACATGCGTTAAAAACTTTACGAGTCTTGAATCTCTCGAC
FD974722       <-- TCTCAACAGAAACATGCGTTAA--ACTTAACGAGTCTTGGATCTCTCGAC
FD952628       <-- TCTCAACAGAAACATGCGTTAAAAACTTTACGAGTCTTGAATCTCTCGAC
FD959827       <-- TCTCAACAGAAACATGCGTTAAAAACTTTACGAGTCTTGAATCTCTCGAC
EV544269       <-- TCTCAACAGAAACATGCGTTAAAAACTTTACGAGTCTTAAATCTCTCGAC
FD975109       <-- TCTCAACAGAAACATGCGTTAA--ACTTAACGAGTCTTGGATCTCTCGAC
FD963547       --> ..................................................
EV538868       --> ..................................................
FD535515       --> ..................................................
FD956471       --> ..................................................
FD956825       --> ..................................................
FD978484       --> ..................................................
FD988419       --> ..................................................
FD978958       --> TCTCAACAGAAACATGCGTTAAA--CTTAACGAGTCTTGGATCTCTCGAC

               1101   -   1151
UN16644        --> CAATGTTATATGATCATAACCATTGTAGTATGTGTATTCTCGACCATATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD952347       <-- CAATGTTATATGATCATAACCATTGTAGTATGTGTATTCTCGACCATATC
FD974722       <-- CAATGTTATATGAGCATAATCATTGTAGTATGTGTATTCTCGACCACATC
FD952628       <-- CAATGTTATATGATCATAACCATTGTAGTATGTGTATTCTCGACCATATC
FD959827       <-- CAATGTTATATGATCATAACCATTGTAGTATGTGTATTCTCGACCATATC
EV544269       <-- CAATGTTATATGATCATAACCATTGTAGTATGTGTATTCTCGACCATATC
FD975109       <-- CAATGTTATATGAGCATAATCATTGTAGTATGTGTATTCTCGACCATATC
FD963547       --> ..................................................
EV538868       --> ..................................................
FD535515       --> ..................................................
FD956471       --> ..................................................
FD956825       --> ..................................................
FD978484       --> ..................................................
FD988419       --> ..................................................
FD978958       --> CAATGTTATATGAGCATAATCATTGTAGTATGTGTATTCTCGACCATATC

               1151   -   1201
UN16644        --> TAGTGACATGGAAAGTGTTTTTTACTTTTCACAACAGCAAACAATGAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD952347       <-- TAGTGACATGGAAAGTGTTTTTTACTTTTCACAACAGCAAACAATGAAAA
FD974722       <-- TAGTGACATGGAAAGTGTTTTTTACTTTCCACAACAGCAAACAATGAAAA
FD952628       <-- TAGTGACATGGAAAGTGTTTTTTACTTTTCACAACAGCAAACAATGAAAA
FD959827       <-- TAGTGACATGGAAAGTGTTTTTTACTTTTCACAACAGCAAACAATGAAAA
EV544269       <-- TAG...............................................
FD975109       <-- TAGTGACATGGAAAGTGTTTTTTACTTTCCACAACAGCAAACAATGAAAA
FD963547       --> ..................................................
EV538868       --> ..................................................
FD535515       --> ..................................................
FD956471       --> ..................................................
FD956825       --> ..................................................
FD978484       --> ..................................................
FD988419       --> ..................................................
FD978958       --> TAGTGACATGGAAAGTGTTTTTTACTTTCCACAACAGCAAACAATGAAAA

               1201   -   1251
UN16644        --> ATCTCGCTTTGGAAAGTGTTTAGTGCATCCTTGATGGAAACTGGCGTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD952347       <-- ATCTCGCTTTGc......................................
FD974722       <-- ATCTCGCTTgg.......................................
FD952628       <-- ATCTCGCTTTGG......................................
FD959827       <-- ATCTCGCTTTGGAAAATGTTTAGTGCATCttgacg...............
EV544269       <-- ..................................................
FD975109       <-- ATCTCGCTTTGAAAAGTGTTTAGTGCATCCTTGATGGAAACTGGCGTTGT
FD963547       --> ..................................................
EV538868       --> ..................................................
FD535515       --> ..................................................
FD956471       --> ..................................................
FD956825       --> ..................................................
FD978484       --> ..................................................
FD988419       --> ..................................................
FD978958       --> ATCTCGCTTTGAAAAGTGTTTAGTGCATCCTTGATGGAAACTGGCGTTGT

               1251   -   1301
UN16644        --> GTTTAAGTCTTCTT
                   ~~~~~~~~~~~~~~
FD952347       <-- ..............
FD974722       <-- ..............
FD952628       <-- ..............
FD959827       <-- ..............
EV544269       <-- ..............
FD975109       <-- GTTTAAGTCTTCTT
FD963547       --> ..............
EV538868       --> ..............
FD535515       --> ..............
FD956471       --> ..............
FD956825       --> ..............
FD978484       --> ..............
FD988419       --> ..............
FD978958       --> GTTTAAGTCTTCTT