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Alignment for radish unigene UN16700

               1      -     51
UN16700        --> GGGAAAACCCTAGCTGTTACTGTTATCTCCGTCACTCTCTTCTGAGAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911253       <-- ..................................................
FD547598       <-- ..................................................
FD548133       <-- ..................................................
FD555134       <-- ..................................................
EY927662       <-- ..................................................
EY909149       --> GGGAAAACCCTAGCTGTTACTGTTATCTCCGTCACTCTCTTCTGAGAACA
EY931794       --> ..................................................
FD551755       --> ..................................................
FD552339       --> ..................................................
FD559429       --> ..................................................

               51     -    101
UN16700        --> GAGGAACTCGAGTCTTTCTTTACTCTTTACTCCGCAAGCAAGCAACAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911253       <-- ..................................................
FD547598       <-- ..................................................
FD548133       <-- ..................................................
FD555134       <-- ..................................................
EY927662       <-- ..................................................
EY909149       --> GAGGAACTCGAGTCTTTCTTTACTCTTTACCCCGCGAGCAAGCAACAATG
EY931794       --> ..gggagaacagaggaactcgagTCTTTACTCCGCAAGCAAGCAACAATG
FD551755       --> ..gggagaacagaggaactcgagTCTTTACTCCGCAAGCAAGCAACAATG
FD552339       --> ....gggaacagaggaactcgagTCTTTACTCCGCAAGCAAGCAACAATG
FD559429       --> ........ggagaggaactcgagTCTTTACTCCGCAAGCAAGCAACAATG

               101    -    151
UN16700        --> GTGAAGGCAACAAAGGCGGAGAAGAAGATCGCTTACGACGCGAAGCTATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911253       <-- ..................................................
FD547598       <-- ..................................................
FD548133       <-- ..................................................
FD555134       <-- ..................................................
EY927662       <-- ..................................................
EY909149       --> GTGAAGGCGACAAAGGCGGAGAAGAAGATCGCTTACGACGCGAAGCTATG
EY931794       --> GTGAAGGCAACAAAGGCGGAGAAGAAGATCGCTTACGACGCGAAGCTATG
FD551755       --> GTGAAGGCAACAAAGGCGGAGAAGAAGATCGCTTACGACGCGAAGCTATG
FD552339       --> GTGAAGGCAACAAAGGCGGAGAAGAAGATCGCTTACGACGCGAAGCTATG
FD559429       --> GTGAAGGCAACAAAGGCGGAGAAGAAGATCGCTTACGACGCGAAGCTATG

               151    -    201
UN16700        --> CCAGCTCATCGACGAGTTCACACAGATCTTAGTCGTCGCCGCGGACAACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911253       <-- ..................................................
FD547598       <-- ..................................................
FD548133       <-- ..................................................
FD555134       <-- ..................................................
EY927662       <-- ..................................................
EY909149       --> CCAGCTCATCGACGAGTTCACACAGATCTTGGTCGTCGCCGCGGACAGCG
EY931794       --> CCAGCTCATCGACGAGTTCACACAGATCTTAGTCGTCGCCGCGGACAACG
FD551755       --> CCAGCTCATCGACGAGTTCACACAGATCTTAGTCGTCGCCGCGGACAACG
FD552339       --> CCAGCTCATCGACGAGTTCACACAGATCTTAGTCGTCGCCGCGGACAACG
FD559429       --> CCAGCTCATCGACGAGTTCACACAGATCTTAGTCGTCGCCGCGGACAACG

               201    -    251
UN16700        --> TGGGATCGACTCAGCTACAGAACATCAGGAAGGGACTTCGCGGAGACTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911253       <-- ..................................................
FD547598       <-- ..................................................
FD548133       <-- ..................................................
FD555134       <-- ..................................................
EY927662       <-- ..................................................
EY909149       --> TGGGATCAACTCAGCTACAGAACATCAGGAAGGGACTTCGCGGAGACTCA
EY931794       --> TGGGATCGACTCAGCTACAGAACATCAGGAAGGGACTTCGCGGAGACTCA
FD551755       --> TGGGATCGACTCAACTACAGAACATCAGGAAGGGACTTCGCGGAGACTCA
FD552339       --> TGGGATCGACTCAGCTACAGAACATCAGGAAGGGACTTCGCGGAGACTCA
FD559429       --> TGGGATCGACTCAGCTACAGAACATCAGGAAGGGACTTCGCGGAGACTCA

               251    -    301
UN16700        --> GTGGTGCTCATGGGGAAGAACACCATGATGAAACGTTCGGTTAAGATCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911253       <-- ..................................................
FD547598       <-- ..................................................
FD548133       <-- ..................................................
FD555134       <-- ..................................................
EY927662       <-- ..................................................
EY909149       --> GTGGTGCTCATGGGGAAGAACACTATGATGAAGCGTTCTGTTAAGATCCA
EY931794       --> GTGGTGCTCATGGGGAAGAACACCATGATGAAACGTTCGGTTAAGATCCA
FD551755       --> GTGGTGCTCATGGGGAAGAACACCATGATGAAACGTTCGGTTAAGATCCA
FD552339       --> GTGGTGCTCATGGGGAAGAACACCATGATGAAACTTTCGGTTAAGATCCA
FD559429       --> GTGGTGCTCATGGGGAAGAACACCATGATGAAACGTTCGGTTAAGATCCA

               301    -    351
UN16700        --> CGCCGAGAACACGGGGAACACTGGGATCCTCAATCTCATGCCCCTCCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911253       <-- ..................................................
FD547598       <-- ..................................................
FD548133       <-- ..................................................
FD555134       <-- ..................................................
EY927662       <-- ..................................................
EY909149       --> CGCCGAGAACACCGGGAACACTGGGATCCTCAATCTCATGCCCCTCCTTC
EY931794       --> CGCCGAGAACACGGGGAACACTGGGATCCTCAATCTCATGCCCCTCCTTC
FD551755       --> CGCCGAGAACACGGGGAACACTGGGATCCTCAATCTCATGCCCCTCCTTC
FD552339       --> CGCCGAGAACACGGGGAACACTGGGATCCTCAATCTCATGCCCCTCCTTC
FD559429       --> CGCCGAGATTACGGGGAACACTGGGATCCTCAATCTCATGCCCCTCCTTC

               351    -    401
UN16700        --> AGGGAAATGTTGGTTTGATCTTCACCAAGGGTGACCTCAAGGAAGTGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911253       <-- ..................TCTTCACCAAGGGTGACCTCAAGGAAGTGAGC
FD547598       <-- ..................................................
FD548133       <-- ..................................................
FD555134       <-- ..................................................
EY927662       <-- ..................................................
EY909149       --> AGGGAAATGTTGGTTTGATCTTCACCAAGGGTGACCTCAAGGAAGTGAGC
EY931794       --> AGGGAAATGTTGGTTTGATCTTCACCAAGGGTGACCTCAAGGAAGTGAGC
FD551755       --> AGGGAAATGTTGGTTTGATCTTCACCAAGGGTGACCTCAAGGAAGTGAGC
FD552339       --> AGGGAAATGTTGGTTTGATCTTCACCAAGGGTGACCTCAAGGAAGTGAGC
FD559429       --> AGGGAAATGTTGGTTTGATCTTCACCAAGGGTGACCTCAAGGAAGTGAGC

               401    -    451
UN16700        --> GAGGAAGTTGCCAAGTACAAGGTCGGTGCTCCTGCTCGTGTGGGTTTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911253       <-- GAGGAAGTTGCCAAGTACAAGGTCGGTGCTC-TGCTCGTGTGGGTTTGGT
FD547598       <-- ...................................TCGTGTGGGTTTGGT
FD548133       <-- ...................................TCGTGTGGGTTTGGT
FD555134       <-- ...................................TCGTGTGGGTTTGGT
EY927662       <-- ..................................................
EY909149       --> GAGGAAGTTGCCAAGTACAAGGTTGGTGCTCCTGCTCGTGTGGGTTTGGT
EY931794       --> GAGGAAGTTGCCAAGTACAAGGTCGGTGCTCCTGCTCGTGTGGGTTTGGT
FD551755       --> GAGGAAGTTGCCAAGTACAAGGTCGGTGCTCCTGCTCGTGTGGGTTTGGT
FD552339       --> GAGGAAGTTGCCAAGTACAAGGTCGGTGCTCCTGCTCGTGTGGGTTTGGT
FD559429       --> GAGGAAGTTGCCAAGTACAAGGTCGGTGCTCCTGCTCGTGTGGGTTTGGT

               451    -    501
UN16700        --> AGCCCCAATTGATGTGGTTGTCCAGCCTGGTAACACCGGTCTCGATCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911253       <-- AGCCCCAATTGATGTGGTTGTCCAGCCTGGTAACACCGGTCTCGATCCAT
FD547598       <-- AGCCCCAATTGATGTGGTTGTCCAGCCTGGTAACACCGGTCTCGATCCAT
FD548133       <-- AGCCCCAATTGATGTGGTTGTCCAGCCTGGTAACACCGGTCTCGATCCAT
FD555134       <-- AGCCCCAATTGATGTGGTTGTCCAGCCTGGTAACACCGGTCTCGATCCAT
EY927662       <-- ..................................................
EY909149       --> TGCCCCAATTGACGTGGTTGCCCAGCCTGGTAACACCGGTCTCGATCCAT
EY931794       --> AGCCCCAATTGATGTGGTTGTCCAGCCTGGTAACACCGGTCTCGATCCAT
FD551755       --> AGCCCCAATTGATGTGGTTGTCCAGCCTGGTAACACCGGTCTCGATCCAT
FD552339       --> AGCCCCAATTGATGTGGTTGTCCAGCCTGGTAACACCGGTCTCGATCCAT
FD559429       --> AGCCCCAATTGATGTGGTTGTCCAGCCTGGTAACACCGGTCTCGATCCAT

               501    -    551
UN16700        --> CCCAGACATCTTTCTTCCAGGTTCTTAACATTCCAACTAAGATTAACAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911253       <-- CCCAGACATCTTTCTTCCAGGTTCTTAACATTCCAACTAAGATTAACAAG
FD547598       <-- CCCAGACATCTTTCTTCCAGGTTCTTAACATTCCAACTAAGATTAACAAG
FD548133       <-- CCCAGACATCTTTCTTCCAGGTTCTTAACATTCCAACTAAGATTAACAAG
FD555134       <-- CCCAGACATCTTTCTTCCAGGTTCTTAACGTTCCAACTAAGATTAACAAG
EY927662       <-- ..................................................
EY909149       --> CCCAGACATCTTTCTTCCAGGTTCTTAACATCCCAACTAAGATTAACAAG
EY931794       --> CCCAGACATTTTTCTTCCAGGTTCTTAACATTCCAACTAAGATTAACAAG
FD551755       --> CCCAGACATCTTTCTTCCAGGTTCTTAACATTCCAACTAAGATTAACAAG
FD552339       --> CCCAGACATCTTTCTTCCAGGTTCTTAACATTCCAACTAAGATTAACAAG
FD559429       --> CCCAGACATCTTTCTTCCAGGTTCTTAACGTTCCAACTAAGATTAACAAG

               551    -    601
UN16700        --> GGAACAGTCGAAATCATCACCCCTGTTGAGCTCATCAAGCAAGGTGACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911253       <-- GGAACAGTCGAAATCATCACCCCTGTTGAGCTCATCAAGCAAGGTGACAA
FD547598       <-- GGAACAGTCGAAATCATCACCCCTGTTGAGCTCATCAAGCAAGGTGACAA
FD548133       <-- GGAACAGTCGAAATCATCACCCCTGTTGAGCTCATCAAGCAAGGTGACAA
FD555134       <-- GGAACAGTCGAAATCATCACCCCTGTTGAGCTCATCAAGCAAGGTGACAA
EY927662       <-- ............................AGCTCATCAAACAAGGTGACAA
EY909149       --> GGAACAGTCGAAATCATCACCCCTGTTGAGCTCATC..............
EY931794       --> GGAACAGTCGAAATCATCACCCCTGTTGAGCTCATCAAACAAGGTGACAA
FD551755       --> GGAACAGTCGAAATCATCACCCCTGTTGAGCTCATCAAGCAAGGTGACAA
FD552339       --> GGAACAGTCGAAATCATCACCCCTGTTGAGCTCATCAAGCAAGGTGACAA
FD559429       --> GGAACAGTCGAAATCATCACCCCTGTTGAGCTCATCAAGCAAGGTGACAA

               601    -    651
UN16700        --> AGTCGGTTCTTCTGAGGCCGCCCTTCTAGCCAAGCTCGGCATCAGGCCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911253       <-- AGTCGGTTCTTCTGAGGCCGCCCTTCTAGCCAAGCTCGGCATCAGGCCGT
FD547598       <-- AGTCGGTTCTTCTGAGGCCGCCCTTCTAGCCAAGCTCGGCATCAGGCCGT
FD548133       <-- AGTCGGTTCTTCTGAGGCCGCCCTTCTAGCCAAGCTCGGCATCAGGCCGT
FD555134       <-- AGTCGGTTCTTCTGAGGCCGCCCTTCTAGCCAAGCTCGGCATCAGGCCGT
EY927662       <-- AGTCGGTTCTTCTGAGGCCGCCCTTCTAGCCAAGCTCGGCATCAGGCCGT
EY909149       --> ..................................................
EY931794       --> AGTCGGTTCTTCTGAGGCCGCCCTTCTAGCCAAGCTCGGCATCAGGCCGT
FD551755       --> AGTCGGTTCTTCTGAGGCCGCCCTTCTAGCCAAGCTCGGCATCAGGCCGT
FD552339       --> AGTCGGTTCTTCTGAGGCCGCCCTTCTAGCCAAGCTCGGCA.........
FD559429       --> AGTCGGTTCTTCTGAGGCCGCCCTTCTAGCCAAGCTCGGCATCAGGCCGT

               651    -    701
UN16700        --> TCTCATACGGTCTTGTTGTCCAGTCGGTTTACGACAATGGCTCAGTCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911253       <-- TCTCATACGGTCTTGTTGTCCAGTCGGTTTACGACAATGGCTCAGTCTTC
FD547598       <-- TCTCATACGGTCTTGTTGTCCAGTCGGTTTACGACAATGGCTCAGTCTTC
FD548133       <-- TTTCATACGGTCTTGTTGTCCAGTCGGTTTACGACAATGGCTCAGTCTTC
FD555134       <-- TCTCATACGGTCTTGTTGTCCAGTCGGTTTACGACAATGGCTCAGTCTTC
EY927662       <-- TCTCATACGGTCTTGTCGTCCAGTCGGTTTACGACAATGGCTCAGTCTTC
EY909149       --> ..................................................
EY931794       --> TCTCATACGGTCTTGTCGTCCAGTCGGTTTACGACAATGGCTCAGTCTTC
FD551755       --> TCTCATACGGTCTTGTTGTCCAGTCGGTTTACGACAATGGCTCAGTCTTC
FD552339       --> ..................................................
FD559429       --> TCTCATACGGTCTTGTTGTCCAGTCGGTTTACGACAATGGCTCAGTCTTC

               701    -    751
UN16700        --> AGCCCAGAGGTTCTTGATCTCACGGAAGATGACCTTGTCCAGAAGTTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911253       <-- AGCCCAAAGGTTCTTGATCTCACGGAAGATGACCTTGTCCAGAAGTTTGC
FD547598       <-- AGCCCAGAGGTTCTTGATCTCACGGAAGATGACCTTGTCCAGAAGTTTGC
FD548133       <-- AGCCCAGAGGTTCTTGATCTCACGGAAGATGACCTTGTCCAGAAGTTTGC
FD555134       <-- AGCCCAGAGGTTCTTGATCTCACGGAAGATGACCTTGTCCAGAAGTTTGC
EY927662       <-- AGCCCAGAGGTTCTTGATCTCACGGAAGATGACCTTGTCCAGAAGTTTGC
EY909149       --> ..................................................
EY931794       --> AGCCCAGAGGTTCTTGATCTCACGGAAGATGACCTTGTCCAGAAGTTTGC
FD551755       --> AGCCC.............................................
FD552339       --> ..................................................
FD559429       --> AGCCCAGAGGTTCTTGATCTCACGGAAGATGAC-TTGTCCAGAAGTTTGC

               751    -    801
UN16700        --> CGCTGGTATCTGCATGGTCACTTCCTTGGCTCTAGCTATCTCTTACCCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911253       <-- CGCTGGTATCTGCATGGTCACTTCCTTGGCTCTAGCTATCTCTTACCCTA
FD547598       <-- CGCTGGTATCTGCATGGTCACTTCCTTGGCTCTAGCTATCTCTTACCCTA
FD548133       <-- CGCTGGTATCTGCATGGTCACTTCCTTGGCTCTAGCTATTTCTTACCCTA
FD555134       <-- CGCTGGTATCTGCATGGTCACTTCCTTGGCTCTAGCTATCTCTTACCCTA
EY927662       <-- CGCTGGTATCTGCATGGTCACTTCCTTGGCTCTAGCTATCTCTTACCCTA
EY909149       --> ..................................................
EY931794       --> CGCTGGTATCTGCATGGTCACTTCCTTGGCTCTAGCTATCTCTTACCCTA
FD551755       --> ..................................................
FD552339       --> ..................................................
FD559429       --> CGCTGGTATCTGCATGGTCACTTCCTTGGCTCTAGCTATCTCTTACC-TA

               801    -    851
UN16700        --> CCCTTGCTGCTGCCCCGCATATGTTCATCAATGCATACAAGAATGCCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911253       <-- CCCTTGCTGCTGCCCCGCATATGTTCATCAATGCGTACAAGAATGCCTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547598       <-- CCCTTGCTGCTGCCCCGCATATGTTCATCAATGCGTACAAGAATGCCTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD548133       <-- CCCTTGCTGCTGCCCCGCATATGTTCATCAATGCGTACAAGAATGCCTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD555134       <-- CCCTTGCTGCTGCCCCGCATATGTTCATCAATGCATACAAGAATGCCTTG  Raphanus raphanistrum subsp. landra
EY927662       <-- CCCTTGCTGCTGCCCCGCATATGTTCATCAATGCATACAAGAATGCCTTG  Raphanus sativus var. oleiformis
EY909149       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY931794       --> CCCTTGCTGCTGCCCCGCATATGTTCATCAATGCATACA...........  Raphanus sativus var. oleiformis
FD551755       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552339       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD559429       --> CCCTTGCTGCTGCCCCGCATATGTTCATCAATGCATACAAGAA.......  Raphanus raphanistrum subsp. landra

               851    -    901
UN16700        --> GCTATCTCTGTTGCCACTGAGTACACTTTCCCTCAAGCAGAGAAGGTTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911253       <-- GCTATCTCTGTTGCGACTGAGTACACTTTCCCTCAAGCAGAGAGGGTTAA
FD547598       <-- GCTATCTCTGTTGCCACTGAGTACACTTTCCCTCAAGCCGAGAAGGTTAA
FD548133       <-- GCTATTTCTGTTGCCACTGAGTACACTTTCCCTCAAGCAGAGAAGGTTAA
FD555134       <-- GCTATCTCTGTTGCCACTGAGTACACTTTCCCTCAAGCAGAGAAGGTTAA
EY927662       <-- GCTATCTCTGTTGCCACTGAGTACACTTTCCCTCAAGCAGAGAAGGTTAA
EY909149       --> ..................................................
EY931794       --> ..................................................
FD551755       --> ..................................................
FD552339       --> ..................................................
FD559429       --> ..................................................

               901    -    951
UN16700        --> AGAGTTCTTGAAGGATCCTAGCAAGTTTGCTGTTGCTGTAGCGGCTGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911253       <-- AGAGTTCTTGAAGGATCCTAGCAAGTTTGCTGTTGCTGTAGCGGCTGTGT
FD547598       <-- AGAGTTCTTGAAGGATCCTAGCAAGTTTGCTGTTGCTGTAGCGGCTGTGT
FD548133       <-- AGAGTTCTTGAAGGATCCTAGCAAGTTTGCTGTTGCTGTAGCGGCTGTGT
FD555134       <-- AGAGTTCTTGAAGGATCCTAGCAAGTTTGCTGTTGCTGTAGCGGCTGTGT
EY927662       <-- AGAGTTCTTGAAGGATCCTAGCAAGTTTGCTGTTGCTGTAGCGGCTGTGT
EY909149       --> ..................................................
EY931794       --> ..................................................
FD551755       --> ..................................................
FD552339       --> ..................................................
FD559429       --> ..................................................

               951    -   1001
UN16700        --> CTGCTGATGCGGGTGGTGGTGCTTCAGCTGGAGCTGCCAAGGTAGAGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911253       <-- CTGCTGATGCGGGTGGTGGTGCTTCAGCTGGAGCTGCCAAGGTAGAGGAG
FD547598       <-- CTGCTGATGCGGGTGGTGGTGCTTCAGCTGGAGCTGCCAAGGTAGAGGAG
FD548133       <-- CTGCTGATGCGGGTGGTGGTGCTTCAGCTGGAGCTGCCAAGGTAGAGGAG
FD555134       <-- CTGCTGATGCGGGTGGTGGTGCTTCAGCTGGAGCTGCCAAGGTAGAGGAG
EY927662       <-- CTGCTGATGCGGGTGGTGGTGCTTCAGCTGGAGCTGCCAAGGTAGAGGAG
EY909149       --> ..................................................
EY931794       --> ..................................................
FD551755       --> ..................................................
FD552339       --> ..................................................
FD559429       --> ..................................................

               1001   -   1051
UN16700        --> AAGAAGGAAGTGGTTGAGGAATCAGATGAAGAAGACTATGGTGGTTTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911253       <-- AAGAAGGAAGTGGTTGAGGAATCAGATGAAGAAGACTATGGTGGTTTTGA
FD547598       <-- AAGAAGGAAGTGGTTGAGGAATCAGATGAAGAAGACTATGGTGGTTTTGA
FD548133       <-- AAGAAGGAAGTGGTTGAGGAATCAGATGAAGAAGACTATGGTGGTTTTGA
FD555134       <-- AAGAAGGAAGTGGTTGAGGAATCAGATGAAGAAGACTATGGTGGTTTTGA
EY927662       <-- AAGAAGGAAGTGGTTGAGGAATCAGATGAAGAAGACTATGGTGGTTTTGA
EY909149       --> ..................................................
EY931794       --> ..................................................
FD551755       --> ..................................................
FD552339       --> ..................................................
FD559429       --> ..................................................

               1051   -   1101
UN16700        --> CATGTTCGGTGATGAGTAGATTAATATATGATTTTTTTACACAAAGACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911253       <-- CATGTTCGGTGATGAGTAGATTAATATATGATTTTTTTACACAAAGACAC
FD547598       <-- CATGTTCGGTGATGAGTAGATTAATATATGATTTTTTTACACAAAGACAC
FD548133       <-- CATGTTCGGTGATGAGTAGATTAATATATGATTTTTTTACACAAAGACAC
FD555134       <-- CATGTTCGGTGATGAGTAGATTAATATATGATTTTTTTACACAAAGACAC
EY927662       <-- CATGTTCGGTGATGAGTAGATTAATATATGATTTTTTTACACAAAGACAC
EY909149       --> ..................................................
EY931794       --> ..................................................
FD551755       --> ..................................................
FD552339       --> ..................................................
FD559429       --> ..................................................

               1101   -   1151
UN16700        --> ATTATGACTTCTCTATTACATCAAGAGACACATTGCATTGAGACACTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911253       <-- ATTATGACTTCTCTATTACATCAAGAGACACATTGCATTGAGACACTTTT
FD547598       <-- ATTATGACTTCTCTATTACATCAAGAGACACATTGCATTGAGACACTTTT
FD548133       <-- ATTATGACTTCTCTATTACATCAAGAGACACATTGCATTGAGACACTTTT
FD555134       <-- ATTATGACTTCTCTATTACATCAAGAGACGTATTGCATTGAGACACTTTT
EY927662       <-- ATTATGACTTCTCTATTACATCAAGGGACGTATTGCATTGAGACACTTTT
EY909149       --> ..................................................
EY931794       --> ..................................................
FD551755       --> ..................................................
FD552339       --> ..................................................
FD559429       --> ..................................................

               1151   -   1201
UN16700        --> TAGTGTTGATTTGTCCATTTTATCTTTTTTACCATCTGATCCAATTATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911253       <-- TAGTGTTGATTTGTCCATTTTATCTTTTTTACCATCTGATCC........
FD547598       <-- TAGTGTTGATTTGTCCATTTTATCTTTTTTACCATCTGATCC........
FD548133       <-- TAGTGTTGATTTGTCCATTTT.............................
FD555134       <-- TAGCGTTGATTTGTC...................................
EY927662       <-- TAGCGTTGATTTGTCCATTTTATCTTTTTTACCATCTGATCCAATTATTT
EY909149       --> ..................................................
EY931794       --> ..................................................
FD551755       --> ..................................................
FD552339       --> ..................................................
FD559429       --> ..................................................

               1201   -   1251
UN16700        --> CTGTTTTGAATTCTTTTGTCTTTCTTTGAATCTACTTGATGCAGTCTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911253       <-- ..................................................
FD547598       <-- ..................................................
FD548133       <-- ..................................................
FD555134       <-- ..................................................
EY927662       <-- CTGTTTTGAATTCTTTTGTCTTTCTTTGAATCTACTTGATGCAGTCTTTA
EY909149       --> ..................................................
EY931794       --> ..................................................
FD551755       --> ..................................................
FD552339       --> ..................................................
FD559429       --> ..................................................

               1251   -   1301
UN16700        --> ACTAATATAGTGGAACTCTAC
                   ~~~~~~~~~~~~~~~~~~~~~
EY911253       <-- .....................
FD547598       <-- .....................
FD548133       <-- .....................
FD555134       <-- .....................
EY927662       <-- ACTAATATAGTGGAACTCTAC
EY909149       --> .....................
EY931794       --> .....................
FD551755       --> .....................
FD552339       --> .....................
FD559429       --> .....................