RadishBase

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Alignment for radish unigene UN16717

               1      -     51
UN16717        --> ACCCAAATAACAGTCGATTAAAAGACCAAATTGAATAGCAAATAAACCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY900280       <-- ..................................................
EV539297       <-- ..................................................
EV570257       <-- ..................................................
EY921659       <-- ..................................................
FD556142       <-- ..................................................
FD533140       <-- ..................................................
EX756293       <-- ..................................................
FD986163       <-- ..................................................
FD533705       <-- ..................................................
FD964776       <-- ..................................................
EV543121       --> ACCCAAATAACAGTCGATTAAAAGACCAAATTGAATAGCAAATAAACCAG
EY895861       --> ...................AAAAGACCAAATTGAATAGCAAATAAACCAG
FD552494       --> ................................GAATAGCAAATAAACCAG
EX908832       --> ................................ggATAGCAAATAAACCAG
EV574596       --> .....................................GCAAATAAACCAG
EX907771       --> ....................................gGCAAATAAACCAG
EY917768       --> ....................................gGCAAATAAACCAG
FD982457       --> ....................................gGCAAATAAACCAG
EX776452       --> ..................................................
EX768230       --> ..................................................

               51     -    101
UN16717        --> TTTGATTTCAATTTTTCTATGACCACACCATAAAACCGGTTCACACACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY900280       <-- .................TATGACCACACCATAAAACCGGTTCACACACCA
EV539297       <-- ..................................................
EV570257       <-- ..................................................
EY921659       <-- ..................................................
FD556142       <-- ..................................................
FD533140       <-- ..................................................
EX756293       <-- ..................................................
FD986163       <-- ..................................................
FD533705       <-- ..................................................
FD964776       <-- ..................................................
EV543121       --> TTTGATTTTAATTTT-CTATGACCACACCATAAAACCGGTTCACACACCA
EY895861       --> TTTGATTTCAATTTTTCTATGACCACACCATAAAACCGGTTCACACACCA
FD552494       --> TTTGATTTCAATTTTTCTATGACCACACCATAAAACCGGTTCACACACCA
EX908832       --> TTTGATTTCAATTTTTCTATGACCACACCATAAAACCGGTTCACACACCA
EV574596       --> TTTGATTTCAATTTTTCTATAACCACACCATAAAACCGGTTCACACACCA
EX907771       --> TTTGATTTTAATTTT-CTATGACCACACCATAAAACCGGTTCACACACCA
EY917768       --> TTTGATTTCAATTTTTCTATGACCACACCATAAAACCGGTTCACACACCA
FD982457       --> TTTGATTTCAATTTTTCTATGACCACACCATAAAACCGGTTCACACACCA
EX776452       --> ...GATTTCAATTTTTCTATGACCACACCATAAAACCGGTTCACACACCA
EX768230       --> ..................................................

               101    -    151
UN16717        --> CTAGATATGTTCAAAATATGGTGATAGATCGTATACAACATCAGTTAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY900280       <-- CTAGATATGTTCAAAATATGGTGACAGATCGTATACAACATCAGTTAAAC
EV539297       <-- ..................................................
EV570257       <-- ..................................................
EY921659       <-- ..................................................
FD556142       <-- ..................................................
FD533140       <-- ..................................................
EX756293       <-- ..................................................
FD986163       <-- ..................................................
FD533705       <-- ..................................................
FD964776       <-- ..................................................
EV543121       --> CTAGATATGTTCAAAATATGGTGACAGATCGTATACAACATCAGTTAAAC
EY895861       --> CTAGATATGTTCAAAATATGGTGACAGATCGTATACAACATCAGTTAAAC
FD552494       --> CTAGATATGTTCAAAATATGGTGATAGATCGTATACAACATCAGTTAAAC
EX908832       --> CTAGATATGTTCAAAATATGGTGACAGATCGTATACAACATCAGTTAAAC
EV574596       --> CTAGATATGTTCAAAATATGGTGATAGATCGTATACAACATCAGTTAAAC
EX907771       --> CTAGATATGTTCAAAATATGGTGATAGATCGTATACAACATCAGTTAAAC
EY917768       --> CTAGATATGTTCAAAATATGGTGACAGATCGTATACAACATCAGTTAAAC
FD982457       --> CTAGATATGTTCAAAATATGGTGATAGATCGTATACAACATCAGTTAAAC
EX776452       --> CTAGATATGTTCAAAATATGGTGATAGATCGTATACAACATCAGTTAAAC
EX768230       --> ...GATATGTTCAAAATATGGTGATAGATCGTATACAACATCAGTTAAAC

               151    -    201
UN16717        --> AGT--CATTGAATCACATGATGAATCAGAAAATGGCAAATC-GATATCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY900280       <-- AGT--CATTGGATCACATGATGAATCAGAAAATGGCAAATC-GATATCCG
EV539297       <-- ..................................................
EV570257       <-- ..................................................
EY921659       <-- ..................................................
FD556142       <-- ..................................................
FD533140       <-- ..................................................
EX756293       <-- ..................................................
FD986163       <-- ..................................................
FD533705       <-- ..................................................
FD964776       <-- ..................................................
EV543121       --> AGTGTCATTGAATCACATGATGAATCAGAAAATGGCAAATC-GATATCCG
EY895861       --> AGT--CATTGGATCACATGATGAATCAAAAAATGGCAAATC-GATATCCG
FD552494       --> AGT--CATTGAATCACATGATGAATCAGAAAATGGCAAATCTGATATCCG
EX908832       --> AGT--CATTGGATCACATGATAGATCAGAAAATGGCAAATC-GATATCCG
EV574596       --> AGT--CATTGAATCACATGATGAATCAGAAAATGGCAAATCTGATATCCG
EX907771       --> AGT--CATTGAATCACATGATGAATCAGAAAATGGCAAATC-GATATCCG
EY917768       --> AGTGTCATTGAATCACGTGATGAATCAGAAAATGGCAAATC-GATATCCG
FD982457       --> AGT--CATTGAATCACATGATGAATCAGAAAATGGCAAATCTGATATCCG
EX776452       --> AGT--CATTGAATCACATGATGAATCAAAAAATGGCAAATCTGATATCCG
EX768230       --> AGT--CATTGAATCACATGATGAATCAGAAAATGGCAAATC-GATATCCG

               201    -    251
UN16717        --> GTTTAAAGCTTCTTCT---GAGCAGCTTTCGTACCGGGAAGTGTTCCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY900280       <-- GTTTAGAGCTTCTTCTTATGAGCAGCCTTTATACCGGGAAGTGTTCCAAA  Raphanus raphanistrum subsp. maritimus
EV539297       <-- .....................GCAGCTT-CGTACCGGGAAGTGTTCCAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV570257       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY921659       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD556142       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD533140       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX756293       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD986163       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD533705       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD964776       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV543121       --> GTTTAAAGCTTCTTCT---GAGCAGCTTTCGTACCGGGAAGTGTTCCAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895861       --> GTTTAAAGCTTCTTCTTATGAGCAGCCTTTATACCGGGAAGTGTTCCAAA  Raphanus raphanistrum subsp. maritimus
FD552494       --> GTTTAAAGCTTCTTCT---GAGCAGCTTTCGTACCGGGAAGTGTTCCAAA  Raphanus raphanistrum subsp. landra
EX908832       --> GTTTAGAGCTTCTTCTTCTGAGCAGCCTTTATACCGGGGAGTGTTCCAAA  Raphanus sativus cv Rat-Tail Radish #3870
EV574596       --> GTTTAAAGCTTCTTCT---GAGCAGCTTTCGTACCGGGAAGTGTTCCAAA  Raphanus raphanistrum subsp. landra
EX907771       --> GTTTAAAGCTTCTTCT---GAGCAGCTTTCGTACCGGGAAGTGTTCCAAA  Raphanus sativus cv Rat-Tail Radish #3870
EY917768       --> GTTTAGAGCTTCTTCTTCTGAGCAGCCTTTGTACCGGGAAGTGTTCCAAA  Raphanus raphanistrum subsp. landra
FD982457       --> GTTTAAAGCTTCTTCT---GAGCAGCTTTCGTACCGGGAAGTGTTCCAAA  Raphanus raphanistrum subsp. landra
EX776452       --> GTTTAAAGCTTCTTCT---GAGCAGCTTTCGTACCGGGAAGTGTTCCAAA  Raphanus raphanistrum subsp. landra
EX768230       --> GTTTAAAGCTTCTTCT---GAGCAGCTTTCGTACCGGGAAGTGTTCCAAA  Raphanus raphanistrum subsp. raphanistrum (NY)

               251    -    301
UN16717        --> GACTCTATCCCAGAGAGAAGAAGTGATTCCATATCCTTTGTCCTGGATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY900280       <-- GACTCTATCCCAGAGAGATGAAGTGATTCCGTATCCTTTGTCCTGGATTC
EV539297       <-- GACTCTATCCCAGAGAGA--AAGTGATTCCATATCCTTTGTCCTGGATTC
EV570257       <-- ............gaaAGAAGAAGTGAT-CCATAT--CTTGT-CTGGA-TC
EY921659       <-- ...................agAGTGAT-CCATATC-TTTGTCCTGGAT-C
FD556142       <-- ................................................TC
FD533140       <-- ..................................................
EX756293       <-- ..................................................
FD986163       <-- ..................................................
FD533705       <-- ..................................................
FD964776       <-- ..................................................
EV543121       --> GACTCTATCCCAGAGAGAA--AGTGATTCCATATCCTTTGTCCTGGATTC
EY895861       --> GACTCTATCCCAAAAAGATGAAGTGATTCCGTATCCTTTGTCCTGGATTC
FD552494       --> GACTCTATCCCAGAGAGAAGAAGTGATTCCATATCCTTTGTCCTGGATTC
EX908832       --> GACTCTATCCCAGAGAGATGAAGTGATTCCATATCCTTTGTCCTGGATTC
EV574596       --> GACTCTATCCCAGAGAGAAGAAGTGATTCCATATCCTTTGTCCTGGATTC
EX907771       --> GACTCTATCCCAGAGAGAAGAAGTGATTCCATATCCTTTGTCCTGGATTC
EY917768       --> GACTCTATCCCAGAGAGAAGAAGTGATTCCATATCCTTTGTCCTGGATTC
FD982457       --> GACTCTATCCCAGAGAGAAGAAGTGATTCCATATCCTTTGTCCTGGATTC
EX776452       --> GACTCTATCCCAGAGAGAAGAAGTGATTCCATATCCTTTATCCTGGATTC
EX768230       --> GACTCTATCCCAGAGAGAAGAAGTGATTCCATATCCTTTGTCCTGGATTC

               301    -    351
UN16717        --> TGAAGTGATGGTTCAGATGGTATTTCTTGAGATGCTTGAAGGTTGGTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY900280       <-- TGAAGTGATGGTTCAGATGGTATTTCTTGAGATGCTTGAAGGTTGGTTCT
EV539297       <-- TGAAGTGATGGTTCAGATGGTATTTCTTGAGATGCTTGAAGGTTGGTTCT
EV570257       <-- TGAAGTGATGGTTCAGGTGGTATTCCTTGAGATGCTTGAAGGTTGGTTCT
EY921659       <-- TGAAGTGGTGGTTCAGATGGTACTTCTTGAGATGCTTGAAGGTTGGTTCT
FD556142       <-- TGAAGTGATGGTTCAGATGGTATTTCTTGAGATGCTTGAAGGTTGGTTCT
FD533140       <-- .........................tcTGAGATGCTTGAAGGTTGGTTAT
EX756293       <-- ..................................................
FD986163       <-- ..................................................
FD533705       <-- ..................................................
FD964776       <-- ..................................................
EV543121       --> TGAAGTGATGGTTCAGATGGTATTTCTTGAGATGCTTGAAGGTTGGTTCT
EY895861       --> TGAAGTGATGGTTCAAATGGTATTTCTTGAGATGCTTGAAGGTTGGTTCT
FD552494       --> TGAAGTGATGGTTCAGATGGTATTTCTTGAGATGCTTGAAGGTTGGTTCT
EX908832       --> TGAAGTGATGGTTCAGATGGTATTTCTTGAGATGCTTGAAGGTTGGTTCT
EV574596       --> TGAAGTGATGGTTCAGGTGGTATTCCTTGAGATGCTTGAAGGTTGGTTCT
EX907771       --> TGAAGTGATGGTTCAGATGGTATTTCTTGAGATGCTTGAAGGTTGGTTCT
EY917768       --> TGAAGTGGTGGTTCAGATGGTACTTCTTGAGATGCTTGAAGGTTGGTTCT
FD982457       --> TGAAGTGATGGTTCAGGTGGTATTTCTTGAGATGCTTGAAGGTTGGTTCT
EX776452       --> TGAAGTGATGGTTCAGATGGTATTTCTTGAGATGCTTGAAGGTTGGTTCT
EX768230       --> TGAAGTGATGGTTCAGATGGTATTTCTTGAGATGCTTGAAGGTTGGTTCT

               351    -    401
UN16717        --> TTAGGTTGACCGTGGTGTAGATAGAAATGAGTACAATCATACATCACATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY900280       <-- TTAGGTTGACCGTGGTGTAGATAGAAATGAGTACAATCATACATCACATA
EV539297       <-- TTAGGTTGACCGTGGTGTAGATAGAAATGAGTACAATCATACATCACATA
EV570257       <-- TTAGGTTGACCGTGGTGTAGATAGAAATGAGTACAATCATACATCACATA
EY921659       <-- TTAGGTTGACCGTGGTGTAGATAGAAATGAGTACAATCATACATCACATA
FD556142       <-- TTAGGTTGACCGTGGTGTAGATAGAAATGAGTACAATCATACATCACATA
FD533140       <-- TTAGGTTGACCGTGGTGTAGATAGAAATGAGTACAATCATACATCACATA
EX756293       <-- .....................TAGAAATGAGTACAATCATACATCACATA
FD986163       <-- ..................................................
FD533705       <-- ..................................................
FD964776       <-- ..................................................
EV543121       --> TTAGGTTGACCGTGGTGTAGATAGAAATGAGTACAATCATACATCACATA
EY895861       --> TTAGGTTGACCGTGGTGTAGATAGAAATGAGTACAATCATACATCACATA
FD552494       --> TTAGGTTGACCGTGGTGTAGATAGAAATGAGTACAATCATACATCACATA
EX908832       --> TTAGGTTGACCGTGGTGTAGATAGAAATGAGTACAATCATACATCACATA
EV574596       --> TTAGGTTGACCGTGGTGTAGATAGAAATGAGTACAATCATACATCACATA
EX907771       --> TTAGGTTGACCGTGGTGTAGATAGAAATGAGTACAATCATACATCACATA
EY917768       --> TTAGGTTGACCGTGGTGTAGATAGAAATGAGTACAATCATACATCACATA
FD982457       --> TTAGGTTGACCGTGGTGTAGATAGAAATGAGTACAATCATACATCACATA
EX776452       --> TTAGGTTGACCGTGGTGTAGATAGAAATGAGTACAATCATACATCACATA
EX768230       --> TTAGGTTGACCGTGGTGTAGATAGAAATGAGTACAATCATACATCACATA

               401    -    451
UN16717        --> GCCAAACAAAATGCCTCCAAGCATAGCAGGAGCTGTAGCAGGAGTAGCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY900280       <-- GCCAAACAAAATGCCTCCAAGCATAGCAGGAGCTGTAGCAGGAGTAGCTA
EV539297       <-- GCCAAACAAAATGCCTCCAAGCATAGCAGGAGCTGTAGCAGGAGTAGCTA
EV570257       <-- GCCAAACAAAATGCCTCCAAGCATAGCAGGAGCTGTAGCAGGAGTAGCTA
EY921659       <-- GCCAAACAAAATGCCTCCAAGCATAGCAGGAGCTGTAGCAGGAGTAGCTA
FD556142       <-- GCCAAACAAAATGCCTCCAAGCATAGCAGGAGCTGTAGCAGGAGTAGCTA
FD533140       <-- GCCAAACAAAATGCCTCCAAGCATAGCAGGAGCTGTAGCAGGAGTAGCTA
EX756293       <-- GCCAAACAAAATGCCTCCAAGCATAGCAGGAGCTGTAGCAGGAGTAGCTA
FD986163       <-- ..................................................
FD533705       <-- ..................................................
FD964776       <-- ..................................................
EV543121       --> GCCAAACAAAATGCCTCCAAGCATAGCAGGAGCTGTAGCAGGAGTAGCTA
EY895861       --> GCCAAACAAAATGCCTCCAAGCATAGCAGGAGCTGTAGCAGGAGTAGCTA
FD552494       --> GCCAAACAAAATGCCTCCAAGCATAGCAGGAGCTGTAGCAGGAGTAGCTA
EX908832       --> GCCAAACAAAATGCCTCCAAGCATAGCAGGAGCTGTAGCAGGAGTAGCTA
EV574596       --> GCCAAACAAAATGCCTCCAAGCATAGCAGGAGCTGTAGCAGGAGTAGCTA
EX907771       --> ACCAAACAAAATGCCTCCAAGCATAGCAGGAGCTGTAGCAGGAGTAGCTA
EY917768       --> GCCAAACAAAATGCCTCCAAGCATAGCAGGAGCTGTAGCAGGAGTAGCTA
FD982457       --> GCCAAACAAAATGCCTCCAAGCATAGCAGGAGCTGTAGCAGGAGTAGCTA
EX776452       --> GCCAAACAAAATGCCTCCAAGCATAGCAGGAGCTGTAGCAGGAGTAGCTA
EX768230       --> GCCAAACAAAATGCCTCCAAGCATAGCAGGAGCTGTAGCAGGAGTAGCTA

               451    -    501
UN16717        --> TGAGGTGGAGAAGCTTCCATAGTGGAACCAAGAGGATGGCTGTTGCGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY900280       <-- TGAGGTGGAGAAGCTTCCATAGTGGAACCAAGAGGATGGCTGTTGCGGTG  Raphanus raphanistrum subsp. maritimus
EV539297       <-- TGAGGTGCAGAAGCTTCCATAGTGGAACCAAGAGGATGGCTGTTGCGGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV570257       <-- TGAGGTGGAGAAGCTTCCATAGTGGAACCAAGAGGATGGCTGTTGCGGTG  Raphanus raphanistrum subsp. landra
EY921659       <-- TGAGGTGGAGAAGCTTCCATAGTGGAACCAAGAGGATGGCTGTTGCGGTG  Raphanus raphanistrum subsp. landra
FD556142       <-- TGAGGTGGAGAAGCTTCCATAGTGGAACCAAGAGGATGGCTGTTGCGGTG  Raphanus raphanistrum subsp. landra
FD533140       <-- TGAGGTGGAGAAGCTTCCATAGTGGAACCAAGAGGATGGCTGTTGCGGTG  Raphanus raphanistrum subsp. maritimus
EX756293       <-- TGAGGTGCAGAAGCTTCCATAGAGGAACCAAGAGAATGGCTGTTGCGGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD986163       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD533705       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD964776       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV543121       --> TGAGGTGCAGAAGCTTCCATAGTGGAACCAAGAGGATGGCTGTTGCGGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895861       --> TGAGGTGGAGAAGCTTCCATAGTGGAACCAAAAGGATGGCTGTTGCGGTG  Raphanus raphanistrum subsp. maritimus
FD552494       --> TGAGGTGGAGAAGCTTCCATAGTGGAACCAAGAGGATGGCTGTTGCGGTG  Raphanus raphanistrum subsp. landra
EX908832       --> TGAGGTGGAGAAGCTTCCATAGTGGAACCAAGAGGATGGCTGTTGCGGTG  Raphanus sativus cv Rat-Tail Radish #3870
EV574596       --> TGAGGTGGAGAAGCTTCCATAGTGGAACCAAGAGGATGGCTGTTGCGGTG  Raphanus raphanistrum subsp. landra
EX907771       --> TGAGGTGCAGAAGCTTCCATAGTGGAACCAAGAGGATGGCTGTTGCGGTA  Raphanus sativus cv Rat-Tail Radish #3870
EY917768       --> TGAGGTGGAGAAGCTTCCATAGTGGAACCAAGAGGATGGCTGTTGCGGTG  Raphanus raphanistrum subsp. landra
FD982457       --> TGAGGTGGAGAAGCTTCCATAGTGGAACCAAGAGGATGGCTGTTGCGGTG  Raphanus raphanistrum subsp. landra
EX776452       --> TGAGGTGGAGAAGCTTCCATAGTGGAACCAAGAGGATGGCTGTTGCGGTG  Raphanus raphanistrum subsp. landra
EX768230       --> TGAGGTGCAGAAGCTTCCATAGTGGAACCAAGAGGATGGCTGTTGCGGTA  Raphanus raphanistrum subsp. raphanistrum (NY)

               501    -    551
UN16717        --> GGAGGGAAAACAAGACGAAGGCCGTCTTGTGGGTGCTTGTGATGGCATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY900280       <-- GGAGGGAAAACAAGACGAAGGCCGTCTTGTGGGTGCTTGTGATGGCATCC  Raphanus raphanistrum subsp. maritimus
EV539297       <-- GGAGGGAAAACAAGACGAAGACCGTCTTGTGGGTGCTTGTGATGGCATCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV570257       <-- GGAGGGAAAACAAGACGAAGGCCGTCTTGTGGGTGCTTGTGATGGCATCC  Raphanus raphanistrum subsp. landra
EY921659       <-- GGAGGGAAAACAAGACGAAGGCCGTCTTGTGGGTGCTTGTGATGGCATCC  Raphanus raphanistrum subsp. landra
FD556142       <-- GGAGGGAAAACAAGACGAAGGCCATCTTGTGGGTGCTTGTGATGGCATCC  Raphanus raphanistrum subsp. landra
FD533140       <-- GGAGGGAAAACAAGACGAAGGCCGTCTTGTGGGTGCTTGTGATGGCATCC  Raphanus raphanistrum subsp. maritimus
EX756293       <-- GGAGGGAAAACAAGACGAAGACCGTCTTGTGGGTGCTTGTGATGGCATCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD986163       <-- .....GAAAACAAGACGAAGGCCGTCTTATGGGTGCTTGTGATGGCATCC  Raphanus raphanistrum subsp. landra
FD533705       <-- ...................GGCCGTCTTGTGGGTGCTTGTGATGGCATCC  Raphanus raphanistrum subsp. maritimus
FD964776       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV543121       --> GGAGGGAAAACAAGACGAAAACCGTCTTGTGGGTGCTTGTGATGGCATCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895861       --> GGAGGGAAAACAAGACGAAGGCCGTCTTGTGGGTGCTTGTGATGGCATCC  Raphanus raphanistrum subsp. maritimus
FD552494       --> GGAGGGAAAACAAGACGAAGGCCATCTTGTGGGTGCTTGTGATGGCATCC  Raphanus raphanistrum subsp. landra
EX908832       --> GGAGGGAAAACAAGACGAAGACCGTCTTGTGGGTGCTTGTGATGGCATCC  Raphanus sativus cv Rat-Tail Radish #3870
EV574596       --> GGAGGGAAAACAAGACGAAGGCCGTCTTGTGGGTGCTTGTGATGGCATCC  Raphanus raphanistrum subsp. landra
EX907771       --> GGAGGGAAAACAAGACGAAAACCGTCTTGTGGGTGCTTGTGATGGCATCC  Raphanus sativus cv Rat-Tail Radish #3870
EY917768       --> GGAGGGAAAACAAGACGAAGGCCGTCTTGTGGGTGCTTGTGATGGCATCC  Raphanus raphanistrum subsp. landra
FD982457       --> GGAGGGAAAACAAGACGAAGGCCGTCTTATGGGTGCTTGTGATGGCATCC  Raphanus raphanistrum subsp. landra
EX776452       --> GGAGGGAAAACAAGACGAAGGCCGTCTTGTGGGTGCTTGTGATGGCATCC  Raphanus raphanistrum subsp. landra
EX768230       --> GGAGGGAAAACAAGACGAAGGCCGTCTTGTGGGTGCTTGTGATGGCATCC  Raphanus raphanistrum subsp. raphanistrum (NY)

               551    -    601
UN16717        --> ATGAAGAAGATAGTGTGCAGTGTTTGCCCAGTAGCTCTTGGTTTCTATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY900280       <-- ATGAAGAAGATAGTGTGCAGTGTTTGCCCAGTAGCTCTTGGTTTCTATGT
EV539297       <-- ATGAAGAAGATAGTGTGCAGTGTTTGCCCAGTAGCTCTTGGTTTCTATGT
EV570257       <-- ATGAAGAAGATAGTGTGCAGTGTTTGCCCAGTAGCTCTTGGTTTCTATGT
EY921659       <-- ATGAAGAAGATAGTGTGCAGTGTTTGCCCAGTAGCTCTTGGTTTCTATGT
FD556142       <-- GTGAAGAAGATAGTGTGCAGTGTTTGCCCAGTAACTCTTGGTTTCTATGT
FD533140       <-- ATGAAGAAGATAGTGTGCAGTGTTTGCCCAGTAGCTCTTGGTTTCTATGT
EX756293       <-- ATGAAGAAGATAGTGTGCAGTGTTTGCCCAGTAGCTCTTGGTTTCTATGT
FD986163       <-- ATGAAGAAGATAGTGTGCAGTGTTTGCCCAGTAGCTCTTGGTTTCTATGT
FD533705       <-- ATGAAGAAGATAGTGTG-AGTGTTTGCCCAGTAGCTCTTGGTTTCTATGT
FD964776       <-- ...AAGAAGATAGTGTGCAGTGTTTGCCCAGTAGCTCTTGGTTTCTATGT
EV543121       --> ATGAAGAAGATAGTGTGCAGTGTTTGCCCAGTAGCTCTTGGTTTCTATGT
EY895861       --> ATGA..............................................
FD552494       --> GTGAAGAAGATAGTGTGCAGTGTTTGCCCAGTAACTCTTGGTTTCTATGT
EX908832       --> ATGAAGAAGATAATGTGCAGTGTTTGCCCAGTAGCTCTTGGTTTCTATGT
EV574596       --> ATGAAGAAGATAGTGTGCAGTGTTTGCCCAGTAGCTCTTGGTTTCTATGT
EX907771       --> ATGAAGAAGATAGTGTGCAGTGTTTACCCAGTAGCTCTTGGTTTCTATGT
EY917768       --> ATGAAGAAGATAGTGTGCAGTGTTTGCCCAGTAGCTCTTGGTTTCTATGT
FD982457       --> ATGAAGAAGATAGTGTGCAGTGTTTGCCCAGTAGCTCTTGGTTTCTATGT
EX776452       --> GTGAAGAAGATAGTGTGCAGTGTTTGCCCAGTAACTCTTGGTTTCTATGT
EX768230       --> ATGAAGAAGATAGTGTGCAGTGTTTGCCCAGTAGCTCTTGGTTTCTATGT

               601    -    651
UN16717        --> GGAAAAGGAAACGATGAAGTGTGTACTCGAGCAATGTCCACGTGAATACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY900280       <-- GGAAAAGGAAACGATGAAGTGTGTACTCGAGCAATGTCCACGTGAATACG
EV539297       <-- GGAAAAGGAAACGATGAAGTGTGTACTCGAGAAGTGTCCAGGTGAATACG
EV570257       <-- GGAAAAGGAAACGATGAAGTGTGTACTCGAGCAATGTCCACGTGAATACG
EY921659       <-- GGAAAAGGAAACGATGAAGTGTGTACTCGAGCAATGTCCACGTGAATACG
FD556142       <-- GGAAAAGGAAACGATGAAGAGTGTACTCGAGCAGTGTCCACGTGAATACG
FD533140       <-- GGAAAAGGAAACGATGAAGTGTGTACTCGAGCAATGTCCACGTGAATACG
EX756293       <-- GGAAAAGGAAACGATGAAGTGTGTACTCGAGCAATGTCCAGGTGAATACG
FD986163       <-- GGAAAAGGAAACGATGAAGTGTGTACTCGAGCAATGTCCACGTGAATACG
FD533705       <-- GGAAAAGGAAACGATGAAGTGTGTACTCGAGCAATGTCCACGTGAATACG
FD964776       <-- GGAAAAGGAAACGATGAAGTGTGTACTCGAGCAATGTCCACGTGAATACG
EV543121       --> GGAAAAGGAAACGATGAAGTGTGTACTCGAGAAGTGTCCAGGTGAATACG
EY895861       --> ..................................................
FD552494       --> GGAAAAGGAAACGATGAAGAGTGTACTCGAGCAGTGTCCACGTGAATACG
EX908832       --> GGAAAAGGAAACGATGAAGTGTGTACTCGAGCAATGTCCACGTGAATACG
EV574596       --> GGAAAAGGAAACGATGAAGTGTGTACTCGAGCAATGTCCACGTGAATACG
EX907771       --> GGAAAAGGAAACGATGAAGTGTGTACTCGAGCAAAGTCCACGTGAATACG
EY917768       --> GGAAAAGGAAACGATGAAGTGTGTACTCGAGCAATGTCCACGTGAATACG
FD982457       --> GGAAAAGGAAACGATGAAGTGTGTACTCGAGCAATGTCCACGTGAATACG
EX776452       --> GGAAAAGGAAACGATGAAGAGTGTACTCGAGCAGTGTCCACGTGAATACG
EX768230       --> GGAAAAGGAAACGATGAAGTGTGTACTCGAGCAATGTCCACGTGAATACG

               651    -    701
UN16717        --> CCAAATGCAACTATTAAACCCATCTGGGGAAATGTCAGTCCCCTCGCCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY900280       <-- CCAAATGCAACTATTAAACCCATCTGGGGAAATGTCAGTCCCCTCGCCGC  Raphanus raphanistrum subsp. maritimus
EV539297       <-- CCAAATGCAACAATTAAACCCATCTGGGGAAATGTCAGTCCCCTCGCCGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV570257       <-- CCAAATGCAACTATTAAACCCATCTGGGGAAACGTCAGTCCCCTCGCCGC  Raphanus raphanistrum subsp. landra
EY921659       <-- CCAAATGCAACTATTAAACCCATCTGGGGAAATGTCAGTCCCCTCGCCGC  Raphanus raphanistrum subsp. landra
FD556142       <-- CCAAATGCAACTATTAAACCCATCTGGGGAAACGCCAGTCCCCTCGCCGC  Raphanus raphanistrum subsp. landra
FD533140       <-- CCAAATGCAACTATTAAACCCATCTGGGGAAATGTCAGTCCCCTCGCCGC  Raphanus raphanistrum subsp. maritimus
EX756293       <-- CCAAATGCAACAATTAAACCGATCTGGGGAAATGTCAGTCCCCTCGCCGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD986163       <-- CCAAATGCAACTATTAAACCCATCTGGGGAAATGTCAGTCCCCTCGCCGC  Raphanus raphanistrum subsp. landra
FD533705       <-- CCAAATGCAACTATTAAACCCATCTGGGGAAATGTCAGTCCCCTCGCCGC  Raphanus raphanistrum subsp. maritimus
FD964776       <-- CCAAATGCAACTATTAAACCCATCTGGGGAAATGTCAGTCCCCTCGCCGC  Raphanus raphanistrum subsp. maritimus
EV543121       --> CCAAATGCAACAATTAAACCCATCTGGGGAAATGTCAGTCCCCTCGCCGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895861       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD552494       --> CCAAATGCAACTATTAAACCCATCTGGGGAAACGCCAGTCCCCTCGCCGC  Raphanus raphanistrum subsp. landra
EX908832       --> CCAAATGCAACTATTAAACCCATCTGGGGAAATGTCAGTCCCCTCGCCGC  Raphanus sativus cv Rat-Tail Radish #3870
EV574596       --> CCAAATGCAACTATTAAACCCATCTGGGGAAACGTCAGTCCCCTCGCCGC  Raphanus raphanistrum subsp. landra
EX907771       --> CCAAATGCAACAATTAAACCGATCTGGGGAAATGTCAGTCCCCTCGCCGC  Raphanus sativus cv Rat-Tail Radish #3870
EY917768       --> CCAAATGCAACTATTAAACCCATCTGGGGAAATGTCAGTCCCCTCGCCGC  Raphanus raphanistrum subsp. landra
FD982457       --> CCAAATGCAACTATTAAACCCATCTGGGGAAATGTCAGTCCCCTCGCCGC  Raphanus raphanistrum subsp. landra
EX776452       --> CCAAATGCAACTATTAAACCCATCTGGGGAAACGTCAGTCCCCTCGCCGC  Raphanus raphanistrum subsp. landra
EX768230       --> CCAAATGCAACAATTAAACCGATCTGGGGAAATGTCAGTCCCCTCGCCGC  Raphanus raphanistrum subsp. raphanistrum (NY)

               701    -    751
UN16717        --> GGAGATTGAAAGAACGTAGCAGACAACTGGAAGCCAGATTGTTGGGATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY900280       <-- GGAGATTGAAAGAACGTAGCAGACAACTGGAAGCCAGATTGTTGGGATTG
EV539297       <-- GGAGATTGAAAGAACGTAGCAGACAACTGGAAGCCAGATTGTTGGGATTG
EV570257       <-- GGAGATTGAAAGAACGTAGCAGACAACTGGAAGCCAGATTGTTGGGATTG
EY921659       <-- GGAGATTGAAAGAACGTAGCAGACAACTGGAAGCCAGATAGTTGGGATTG
FD556142       <-- GGAGATTGAAAGAACGTAGCAGACAACTGGAAGCCAGATTGTTGGGATTG
FD533140       <-- GGAGATTGAAAGAACGTAGCAGACAACTGGAAGCCAGATTGTTGGGATTG
EX756293       <-- GGAGATTGAAAGAACGTAGCAGACAACTGGAAGCCAGATTGTTGGGATAG
FD986163       <-- GGAGATTGAAAGAACGTAGCAGACAACTGGAAGCCAGATTGTTGGGATTG
FD533705       <-- GGAGATTGAAAGAACGTAGCAGACAACTGGAAGCCAGATTGTTGGGATTG
FD964776       <-- GGAGATTGAAAGAACGTAGCAGACAACTGGAAGCCAGATTGTTGGGATTG
EV543121       --> GGAGATTGAAAGAACGTAGCAGACAACTGGAAGCCAGATTGTTGGGATTG
EY895861       --> ..................................................
FD552494       --> GGAGATTGAAAGAAC...................................
EX908832       --> GGAGATTGAAAGAACGTAGCAGACAACTGGAAGCCAGGTTGTTGGGATTG
EV574596       --> GGAGATTGAAAGAACGTAGCAGACAACTGGAAGCCAGATTGTTGGGATTG
EX907771       --> GGAGATTGAAAGAACGTAGCAGACAACTGGAAGCCAGATTGTTGGGATTG
EY917768       --> GGAGATTGAAAGAA....................................
FD982457       --> GGAGATTGAAAGAACGTAGC..............................
EX776452       --> GGAGATTGAAAGAACGTAGCAGACAACTGGAAGCCAGATTGTTGGGATTG
EX768230       --> GGAGATTGAAAGAACGTAGCAGACAACTGGAAGCCAGATTGTTGGGATTG

               751    -    801
UN16717        --> CCCACCAAACCGTGCGAGTCAAGAACTCCCAAAAATCACTCTGGAAAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY900280       <-- CCCACCAAACCGTGCGAGTCAAGAACTCCC....................
EV539297       <-- CCCACCAAACAGTGCGAGTCAAGAACTCCCAAAAATCACTCTGGAAAAAA
EV570257       <-- CCCACCAAACCGTGCGAGTCAAGAACTCCCAAAAATCACTCTGGAAAAAA
EY921659       <-- CCCACCAAACCGTGCGAGTCAAGAACTCCCAAAAATCACTCTGGAAAAAA
FD556142       <-- CCCACCAAACCGTGCGAGTCAAGAACTCCCAAAAATCACTCTGGAAAAAA
FD533140       <-- CCCACCAAACCGTGCGAGTCAAGAACTCCCAAAAATCACTCTGGAAAAAA
EX756293       <-- CCCACCAAACCGTGCGAGTCAAGAGCTCCCAAAAATCACTCTGGAAAAAA
FD986163       <-- CCCACCAAACCGTGCGAGTCAAGAACTCCCAAAAATCACTCTGGAAAAAA
FD533705       <-- CCCACCAAACCGTGCGAGTCAAGAACTCCCAAAAATCACTCTGGAAAAAA
FD964776       <-- CCCACCAAACCGTGCGAGTCAAGAACTCCCAAAAATCACTCTGGAAAAAA
EV543121       --> CCCACCAAACAGTGCGAGTCAAGAACTCCCAAAAATCACTCTGG......
EY895861       --> ..................................................
FD552494       --> ..................................................
EX908832       --> CTCACCAAACAGTGCGAGTCAAGAACTC......................
EV574596       --> CCCACCAAACCGTGCGAGTCAAGAACTCCCAAAAATCACTCTGG......
EX907771       --> CCCACCAAACAGTGCGAGTCAAGAACTCCCAAAAA...............
EY917768       --> ..................................................
FD982457       --> ..................................................
EX776452       --> CCCACCAAACCGTGCGAGTCA.............................
EX768230       --> CCCACCAAACAGTGCGAGTCAAGAACTCCCAAAAA...............

               801    -    851
UN16717        --> CGAGGACCCTCTACGCATACAATAGGTTGATGAATCCATTCCTGATATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY900280       <-- ..................................................
EV539297       <-- CGAGGACCCTCTACGCATACAATAGGTTGATGAATCCATTCCTGATATTC
EV570257       <-- CGAGGACCCTCTACGCATACAATAGGTTGATGAATCCATTCCTGATATTC
EY921659       <-- CGAGGACACTCTACGCATACAATAGGTTGATGAATCCATTCCTGATATTC
FD556142       <-- CGAGGACCCTCTACGCATACAATAGGTTGATGAATCCATTCCTGATATTC
FD533140       <-- CGAGGACCCTCTACGCATACAATAGGTCGATGAATCCATTCCTGATATTC
EX756293       <-- CGAGGACCCTCTACGCATACAATAGGTTGATGAATCCAT-CCTGATATTC
FD986163       <-- CGAGGACCCTCTACGCATACAATAGGTTGATGAATCCATTCCTGATATTC
FD533705       <-- CGAGGACCCTCTACGCATACAATAGGTTGATGAATCCATTCCTGATATTC
FD964776       <-- CGAGGACCCTCTACGCATACAATAGGTTGATGAATCCATTCCTGATATTC
EV543121       --> ..................................................
EY895861       --> ..................................................
FD552494       --> ..................................................
EX908832       --> ..................................................
EV574596       --> ..................................................
EX907771       --> ..................................................
EY917768       --> ..................................................
FD982457       --> ..................................................
EX776452       --> ..................................................
EX768230       --> ..................................................

               851    -    901
UN16717        --> TTCCCCAAGATGACCAACCTGAAAGACAAGTGGCTTATCCAAATCGACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY900280       <-- ..................................................
EV539297       <-- TTCCCCAAGATGACCAACCTGAAAGACAAGTGGCTTATCCAAATCGACAG
EV570257       <-- TTCCCCAAGATGACCAACCTGAAAGACAAGTGGCTTATCCAAATCGACAG
EY921659       <-- TTCCCCAAGATGACCAACCTGAAAGACAAGTGGCTTATCCAAATCGACAG
FD556142       <-- TTCCCCAAGATGACCAACCTGAAAGACAAGTGGCTTATCCAAATCGACAG
FD533140       <-- TTCCCCAAGATGACCAACCTGAAAGACAAGTGGCTTATCCAAATCGACAG
EX756293       <-- TTCCCCAAGATGACCAACCTGAAAGACAAGTGGCTTATCCAAATCGACAG
FD986163       <-- TTCCCCAAGATGACCAACCTGAAAGACAAGTGGCTTATCCAAATCGACAG
FD533705       <-- TTCCCCAAGATGACCAACCTGAAAGACAAGTGGCTTATCCAAATCGACAG
FD964776       <-- TTCCCCAAGATGACCAACCTGAAAGACAAGTGGCTTATCCAAATCGACAG
EV543121       --> ..................................................
EY895861       --> ..................................................
FD552494       --> ..................................................
EX908832       --> ..................................................
EV574596       --> ..................................................
EX907771       --> ..................................................
EY917768       --> ..................................................
FD982457       --> ..................................................
EX776452       --> ..................................................
EX768230       --> ..................................................

               901    -    951
UN16717        --> TGAAGCGTTCTGCGACCATCTTTGCCACCCAACCGAGACTCTTGGCTTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY900280       <-- ..................................................
EV539297       <-- TGAAGCGTTCTGCGACCATCTTTGCCACCCAACCGAGACTCTTGGCTTAG
EV570257       <-- TGAAGCGTTCTGCGACCATCTTTGCCACCCAACCGAGACTCTTGGCTTAG
EY921659       <-- TGAAGCGTTCTGCGACCATCTTTGCCACCCAACTGAGACTCCTGGCTTAG
FD556142       <-- TGAAGCGTTCTGCGACCATCTTTGCCACCCAACCGAGACTCTTGGCTTAG
FD533140       <-- TGAAGCGTTCTGCGGCCATCTTTGCCACCCAACTGAGACTCTTGGCTTAG
EX756293       <-- TGAAGCG...........................................
FD986163       <-- TGAAGCGTTCTGCGACCATCTTTGCCACCCAACCGAGACTCTTGGCTTAG
FD533705       <-- TGAAGCGTTCTGCGACCATCTTTGCCACCCAACCGAGACTCTTGGCTTAG
FD964776       <-- TGAAGCGTTCTGCGACCATCTTTGCCACCCAACCGAGACTCTTGGCTTAG
EV543121       --> ..................................................
EY895861       --> ..................................................
FD552494       --> ..................................................
EX908832       --> ..................................................
EV574596       --> ..................................................
EX907771       --> ..................................................
EY917768       --> ..................................................
FD982457       --> ..................................................
EX776452       --> ..................................................
EX768230       --> ..................................................

               951    -   1001
UN16717        --> AGGAAGAACAAACGCGTCTCTCTCTCTCTCT--GGGATTGTAAGAGACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY900280       <-- ..................................................
EV539297       <-- AGGAAGAACAAACGCGTCTCTCTCTCTCTCTCTGGGATTGTAAGAGACTC
EV570257       <-- AGGAAGAACAAACGCGTCTCTCTCTCTCTCT--GGGATTGTAAGAGACTC
EY921659       <-- AGGAAGAACAAACGCCTCTCTCTCTCTCTCTCTGGGATTGTAAGAGAATC
FD556142       <-- AGGAAGAACAAACGCCTCTCTCTCTCTCTCT--GGGATTGTAAGAGACTC
FD533140       <-- AGGAAGAACAAACGCCTCTCTCTCTCTCTCT--GGGATTGTAAGAGACTC
EX756293       <-- ..................................................
FD986163       <-- AGGAAGAACAAACGCGTCTCTCTCTCTC--T--GGGATTGTAAGAGACTC
FD533705       <-- AGGAAGAACAAACGCGTCTCTCTCTCTC--T--GGGATTGTAAGAGACTC
FD964776       <-- AGGAAGAACAAACGCGTCTCTCTCTCTCTCT--GGGATTGTAAGAGACTC
EV543121       --> ..................................................
EY895861       --> ..................................................
FD552494       --> ..................................................
EX908832       --> ..................................................
EV574596       --> ..................................................
EX907771       --> ..................................................
EY917768       --> ..................................................
FD982457       --> ..................................................
EX776452       --> ..................................................
EX768230       --> ..................................................

               1001   -   1051
UN16717        --> GC----T----TGCTTCTCTCCAATGAGGGGGAAGGAACAACAACAACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY900280       <-- ..................................................
EV539297       <-- GC----T----TGCTTCTCTCCAATGAGGGGGAAGGAACAACAACAACAa
EV570257       <-- GC----T----TGCTTCTCTCCAATGAGGGGGAAGGAACAACAACAACAG
EY921659       <-- GC----T----TGCTTCTCTCCAATGAGGGGGAAGGAACAACAACAATAG
FD556142       <-- GC----TCGCTTGCTTCTCTCCAATGAGGGGGAAG...............
FD533140       <-- GCCCGCT----TGCTTCTCTCCAATGAGGGGGAAGGAACAACAACAACAG
EX756293       <-- ..................................................
FD986163       <-- GC----T----TGCTTCTCTCCAATGAGGGGGAAG...............
FD533705       <-- GC----T----TGCTTTTCTCCAATGAGGGGGAAGGAACAACAACAACAG
FD964776       <-- GC----T----TGCTTCTCTCCAATGAGGGGGAAG...............
EV543121       --> ..................................................
EY895861       --> ..................................................
FD552494       --> ..................................................
EX908832       --> ..................................................
EV574596       --> ..................................................
EX907771       --> ..................................................
EY917768       --> ..................................................
FD982457       --> ..................................................
EX776452       --> ..................................................
EX768230       --> ..................................................

               1051   -   1101
UN16717        --> CAACACTCTGTCACACAACGATGGGTTTATTATGCTTCTTCTCTTGATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY900280       <-- ..................................................
EV539297       <-- cagagcaaccc.......................................
EV570257       <-- CAACACTCTGTCACACAACGATGGGTTTATTATGCTTCTTCTCTTGATAA
EY921659       <-- CAACcc............................................
FD556142       <-- ..................................................
FD533140       <-- Cgccc.............................................
EX756293       <-- ..................................................
FD986163       <-- ..................................................
FD533705       <-- Cccc..............................................
FD964776       <-- ..................................................
EV543121       --> ..................................................
EY895861       --> ..................................................
FD552494       --> ..................................................
EX908832       --> ..................................................
EV574596       --> ..................................................
EX907771       --> ..................................................
EY917768       --> ..................................................
FD982457       --> ..................................................
EX776452       --> ..................................................
EX768230       --> ..................................................

               1101   -   1151
UN16717        --> TGTTCGGCCCACGTTTTTCTCTCTTTTTTTTCCTTTTTTTCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY900280       <-- ............................................
EV539297       <-- ............................................
EV570257       <-- TGTTCGGCCCACGTTTTTCTCTCTTTTTTTTCCTTTTTTTCTTT
EY921659       <-- ............................................
FD556142       <-- ............................................
FD533140       <-- ............................................
EX756293       <-- ............................................
FD986163       <-- ............................................
FD533705       <-- ............................................
FD964776       <-- ............................................
EV543121       --> ............................................
EY895861       --> ............................................
FD552494       --> ............................................
EX908832       --> ............................................
EV574596       --> ............................................
EX907771       --> ............................................
EY917768       --> ............................................
FD982457       --> ............................................
EX776452       --> ............................................
EX768230       --> ............................................