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Alignment for radish unigene UN16874

               1      -     51
UN16874        --> GGACACGAGGTTACATTATCAACAGATAGCTAAGAAAATAACATAACACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX899847       <-- ..................................................
EW716141       --> GGACACGAGGTTACATTATCAACAGATAGCTAAGAAAATAACATAACACG
EX886411       --> GGACACGAGGTTACATTATCAACAGATAGCTAAGAAAATAACATAACACG
EV548851       --> ..ggACGAGGTTACATTATCAACAGATAGCTAAGAAAATAACATAACACG
EY933473       --> ..ggACGAGGTTACATTATCAACAGATAGCTAAGAAAATAACATAACACG
FD535014       --> ................................................ga
FY447642       --> ...............................................gca
FY449416       --> ..................................................
FY449456       --> ..................................................
EW714600       --> ..................................................
EY916705       --> ..................................................
EW734594       --> ..................................................
EX895826       --> ..................................................

               51     -    101
UN16874        --> CAGTCACATAAATATAGCTTAATGGAGGTGCACAAGGTGGTTGCTCCGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX899847       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW716141       --> CAGTCACATAAATATAGCTTAATGGAGGTGCACAAGGTGGTTACTCCGCC  Raphanus sativus var. oleiformis
EX886411       --> CAGTCACATAAATATAGCTTAATGGAGGTGCACAAGGTGGTTACTCCGCC  Raphanus sativus var. oleiformis
EV548851       --> CAGTCACATAAATATAGCTTAATGGAGGTGCACA-GGTGGTTACTCCGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY933473       --> CAGTCACATAAATATAGCTTAATGGAGGTGCACAAGGTGGTTACTCCGCC  Raphanus sativus var. oleiformis
FD535014       --> gAGTCACATAAATATAGCTCAATGGAGGTGCACAAGGTGGTTGCTCCGCC  Raphanus raphanistrum subsp. maritimus
FY447642       --> gAGTCACATAAATATAGCTTAATGGAGGTGCACAAGGTGGTTGCTCCGCC  Raphanus sativus cv GSK3-1
FY449416       --> .......ATAAATATAGCTTAATGGAGGTGCACAAGGTGGTTGCTCCGCC  Raphanus sativus cv GSK3-1
FY449456       --> .........AAATATAGCTTAATGGAGGTGCACAAGGTGGTTGCTCCGCC  Raphanus sativus cv GSK3-1
EW714600       --> ..................................................  Raphanus sativus var. oleiformis
EY916705       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734594       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX895826       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               101    -    151
UN16874        --> GCATAGGAGCACGGCGGCGAAGCTGAAGACAAGACTGAAGGAGACTTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX899847       <-- ..................................................
EW716141       --> GCATAGGAGCACGGCGGCGAAGCTGAAGACAAGACTGAAGGAGACTTTCT
EX886411       --> GCATAGGAGCACGGCGGCGAAGCTGAAGACAAGACTGAAGGAGACTTTC-
EV548851       --> GCATAGGAGCACGGCGGCGAAGCTGAAGACAAGACTGAAGGAGACTTTCT
EY933473       --> GCATAGGAGCACGGCGGCGAAGCTGAAGACAAGACTGAAGGAGACTTTCT
FD535014       --> GCATAGGAGCACGGCGGCGAAGCTGAAGACAAGACTGAAGGAGACTTTCT
FY447642       --> GCATAGGAGCACGGCGGCGAAGCTGAAGACAAGACTGAAGGAGACTTTCT
FY449416       --> GCATAGGAGCACGGCGGCGAAGCTGAAGACAAGACTGAAGGAGACTTTCT
FY449456       --> GCATAGGAGCACGGCGGCGAAGCTGAAGACAAGACTGAAGGAGACTTTCT
EW714600       --> ..................................................
EY916705       --> ..................................................
EW734594       --> ..................................................
EX895826       --> ..................................................

               151    -    201
UN16874        --> TCCCTGATGATCCTCTAAGACAGTTCAGAGGACAACCGAACCGTATCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX899847       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW716141       --> TCCCTGACGATCCTCTAAGACAGTTCAGAGGACAACCGAACCGTATCAAA  Raphanus sativus var. oleiformis
EX886411       --> --CCTGACGATCCTCTAAGACAGTTCAGAGGACAACCGAACCGTATCAAA  Raphanus sativus var. oleiformis
EV548851       --> TCCCTGACGATCCTCTAAGACAGTTCAGAGGACAACCGAACCGTATCAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY933473       --> TCCCTGACGATCCTCCAAGACAGTTCAGAGGACAACCGAACCGTATCAAA  Raphanus sativus var. oleiformis
FD535014       --> TCCCTGATGATCCTCTAAGACAGTTCAGAGGACAACCGAACCGTACCAAA  Raphanus raphanistrum subsp. maritimus
FY447642       --> TCCCTGATGATCCTCTAAGACAGTTCAGAGGACAACCGAACCGTACCAAA  Raphanus sativus cv GSK3-1
FY449416       --> TCCCTGATGATCCTCTAAGACAGTTCAGAGGACAACCGAACCGTACCAAA  Raphanus sativus cv GSK3-1
FY449456       --> TCCCTGATGATCCTCTAAGACAGTTCAGAGGACAACCGAACCGTACCAAA  Raphanus sativus cv GSK3-1
EW714600       --> ..................................................  Raphanus sativus var. oleiformis
EY916705       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734594       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX895826       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               201    -    251
UN16874        --> CTCATACGAGCCGCTCAATACATTTTCCCAATCCTCCAGTGGTGTCCTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX899847       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW716141       --> CTCATACGAGCCGCTCAATACATTTTCCCAATCCTCCAGTGGTGTCCTGA  Raphanus sativus var. oleiformis
EX886411       --> CTCATACGAGCCGCTCAATACATTTTCCCAATCCTCCAGTGGTGTCCTGA  Raphanus sativus var. oleiformis
EV548851       --> CTCATACGAGCCGCTCAATACATTTTCCCAATCCTCCAGTGGTGTCCTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY933473       --> CTCATACGAGCCGCTCAATACATTTTCCCAATCCTCCAGTGGTGTCCTGA  Raphanus sativus var. oleiformis
FD535014       --> CTCATACGAGCCGCTCAATACATTTTCCCAATCCTCCAGTGGTGTCCAGA  Raphanus raphanistrum subsp. maritimus
FY447642       --> CTCATACGAGCCGCTCAATACATTTTCCCAATCCTCCAGTGGTGTCCAGA  Raphanus sativus cv GSK3-1
FY449416       --> CTCATACGAGCCGCTCAATACATTTTCCCAATCCTCCAGTGGTGTCCAGA  Raphanus sativus cv GSK3-1
FY449456       --> CTCATACGAGCCGCTCAATACATTTTCCCAATCCTCCAGTGGTGTCCAGA  Raphanus sativus cv GSK3-1
EW714600       --> ..................................................  Raphanus sativus var. oleiformis
EY916705       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734594       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX895826       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               251    -    301
UN16874        --> GTACAGCTTTAGACTCCTCAAATCTGACGTCGTTTCAGGTCTCACCATCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX899847       <-- ..................................................
EW716141       --> GTACAGCTTTAGACTCCTCAAATCTGACGTCGTTTCAGGTCTCACCATCG
EX886411       --> GTACAGCTTTAGACTCCTCAAATCTGACGTCGTTTCAGGTCTCACCATCG
EV548851       --> GTACAGCTTTAGACTCCTCAAATCTGACGTCGTTTCAGGTCTCACCATCG
EY933473       --> GTACAGCTTTAGACTCCTCAAATCTGACGTCGTTTCAGGTCTCGCCATCG
FD535014       --> GTACAGCTTTAGACTCCTCAAATCTGACGTCGTTTCAGGTCTCACCATCG
FY447642       --> GTACAGCTTTAGACTCCTCAAATCTGACGTCGTTTCAGGTCTCACCATCG
FY449416       --> GTACAGCTTTAGACTCCTCAAATCTGACGTCGTTTCAGGTCTCACCATCG
FY449456       --> GTACAGCTTTAGACTCCTCAAATCTGACGTCGTTTCAGGTCTCACCATCG
EW714600       --> ..................................................
EY916705       --> ..................................................
EW734594       --> ..................................................
EX895826       --> ..................................................

               301    -    351
UN16874        --> CTAGTTTAGCTATTCCTCAGGGGATAAGTTACGCGAAGCTAGCGAATTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX899847       <-- ..................................................
EW716141       --> CTAGTTTAGCTATTCCTCAGGGGATAAGTTACGCGAAGCTAGCGAATTTA
EX886411       --> CTAGTTTAGCTATTCCTCAGGGGATAAGTTACGCGAAGCTAGCGAATTTA
EV548851       --> CTAGTTTAGCTATTCCTCAGGGGATAAGTTACGCGAAGCTAGCGAATTTA
EY933473       --> CTAGTTTAGCTATTCCTCAGGGGATAAGTTACGCGAAGCTAGCGAATTTA
FD535014       --> CTAGTTTAGCTATTCCTCAGGGGATAAGTTACGCGAAGCTAGCGAATTTA
FY447642       --> CTAGTTTAGCTATTCCTCAGGGGATAAGTTACGCGAAGCTAGCGAATTTA
FY449416       --> CTAGTTTAGCTATTCCTCAGGGGATAAGTTACGCGAAGCTAGCGAATTTA
FY449456       --> CTAGTTTAGCTATTCCTCAGGGGATAAGTTACGCGAAGCTAGCGAATTTA
EW714600       --> ..................................................
EY916705       --> ..................................................
EW734594       --> ..................................................
EX895826       --> ..................................................

               351    -    401
UN16874        --> CCTCCAATTGTCGGTCTATACTCGAGCTTTGTACCACCGTTGGTTTATGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX899847       <-- ..................................................
EW716141       --> CCTCCAATTGTCGGTCTATACTCGAGCTTTGTACCACCGTTGGTTTATGC
EX886411       --> CCTCCAATTGTCGGTCTATACTCGAGCTTTGTACCACCGTTGGTTTATGC
EV548851       --> CCTCCAATTGTCGGTCTATACTCGAGCTTTGTACCACCGTTGGTTTATGC
EY933473       --> CCTCCAATTGTCGGTCTATACTCGAGCTTTGTACCACCGTTGGTTTATGC
FD535014       --> CCTCCAATTGTCGGTCTATACTCGAGCTTTGTACCACCGTTGGTTTATGC
FY447642       --> CCTCCAATTGTCGGTCTATACTCGAGCTTTGTACCACCGTTGGTTTATGC
FY449416       --> CCTCCAATTGTCGGTCTATACTCGAGCTTTGTACCACCGTTGGTTTATGC
FY449456       --> CCTCCAATTGTCGGTCTATACTCGAGCTTTGTACCACCGTTGGTTTATGC
EW714600       --> ..................................................
EY916705       --> ..................................................
EW734594       --> ..................................................
EX895826       --> ..................................................

               401    -    451
UN16874        --> GGTGTTGGGAAGCTCAAGAGATCTAGCGGTGGGACCAGTATCCATAGCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX899847       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW716141       --> GGTGTTGGGAAGCTCAAGAGATCTAGCGGTCGGACCAGTATCCATAGCGT  Raphanus sativus var. oleiformis
EX886411       --> GGTGTTGGGAAGCTCAAGAGATCTAGCGGTCGGACCAGTATCCATAGCGT  Raphanus sativus var. oleiformis
EV548851       --> GGTGTTGGGAAGCTCAAGAGATCTAGCGGTCGGACCAGTATCCATAGCGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY933473       --> GGTGTTGGGAAGCTCAAGAGATCTAGCGGTCGGACCAGTATCCATAGCGT  Raphanus sativus var. oleiformis
FD535014       --> GGTGTTGGGAAGCTCAAGAGATCTAGCGGTGGGACCAGTATCCATAGCGT  Raphanus raphanistrum subsp. maritimus
FY447642       --> GGTGTTGGGAAGCTCAAGAGATCTAGCGGTGGGACCAGTATCCATAGCGT  Raphanus sativus cv GSK3-1
FY449416       --> GGTGTTGGGAAGCTCAAGAGATCTAGCGGTGGGACCAGTATCCATAGCGT  Raphanus sativus cv GSK3-1
FY449456       --> GGTGTTGGGAAGCTCAAGAGATCTAGCGGTGGGACCAGTATCCATAGCGT  Raphanus sativus cv GSK3-1
EW714600       --> ..................................................  Raphanus sativus var. oleiformis
EY916705       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734594       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX895826       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               451    -    501
UN16874        --> CGTTGATCTTAGGGTCCATGCTAAGGCAACAAGTATCTCCCGTAGACAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX899847       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW716141       --> CGTTGATCTTAGGGTCCATGCTAAGGCAACAAGTATCTCCCGTAGACAAT  Raphanus sativus var. oleiformis
EX886411       --> CGTTGATCTTAGGGTCCATGCTAAGGCAACAAGTATCTCCCGTAGACAAT  Raphanus sativus var. oleiformis
EV548851       --> CGTTGATCTTAGGGTCCATGCTAAGGCAACAAGTATCTCCCGTAGACAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY933473       --> CGTTGATCTTAGGGTCCATGCTAAGGCAACAAGTATCTCCCGTAGACAAT  Raphanus sativus var. oleiformis
FD535014       --> CGTTGATCTTAGGGTCCATGCTAAGGCAGCAAGTATCTCCCGTAGACAAT  Raphanus raphanistrum subsp. maritimus
FY447642       --> CGTTGATCTTAGGGTCCATGCTAAGGCAGCAAGTATCTCCCGTAGACAAT  Raphanus sativus cv GSK3-1
FY449416       --> CGTTGATCTTAGGGTCCATGCTAAGGCAGCAAGTATCTCCCGTAGACAAT  Raphanus sativus cv GSK3-1
FY449456       --> CGTTGATCTTAGGGTCCATGCTAAGGCAGCAAGTATCTCCCGTAGACAAT  Raphanus sativus cv GSK3-1
EW714600       --> .........ggGGGTCCATGCCAAGGCAACAAGTATCTCCCGTAGACAAT  Raphanus sativus var. oleiformis
EY916705       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734594       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX895826       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               501    -    551
UN16874        --> CCTATTCTCTTTTTACAGCTCGCTTTCACTTCTACCTTCTTTGCTGGTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX899847       <-- ..................................................
EW716141       --> CCTATTCTCTTTTTACAGCTCGCTTTCACTTCTACCTTCTTTGCTGGTCT
EX886411       --> CCTATTCTCTTTTTACAGCTCGCTTTCACTTCTACCTTCTTTGCTGGTCT
EV548851       --> CCTATTCTCTTTTTACAGCTCGCTTTCACTTATACCTTCTTTGCTGGCCT
EY933473       --> CCTATTCTCTTTTTACAGCTCGCTTTCACTTCTACCTTCTTTGCTGGTCT
FD535014       --> CCTATTCTCTTTTTACAGCTCGCTTTCACTTCTACCTTCTTTGCTGGTCT
FY447642       --> CCTATTCTCTTTTTACAGCTCGCTTTCACTTCTACCTTCTTTGCTGGTCT
FY449416       --> CCTATTCTCTTTTTACAGCTCGCTTTCACTTCTACCTTCTTTGCTGGTCT
FY449456       --> CCTATTCTCTTTTTACAGCTCGCTTTCACTTCTACCTTCTTTGCTGGTCT
EW714600       --> CCTATTCTCTTTTTACAGCTCGCTTTCACTTCTACCTTCTTTGCTGGTCT
EY916705       --> ..................................................
EW734594       --> ..................................................
EX895826       --> ..................................................

               551    -    601
UN16874        --> CTTTCAAGCCTCTCTTGGAATCCTCAGGCTGGGATTTATAATCGACTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX899847       <-- ..................................................
EW716141       --> CTTTCAAGCCTCTCTTGGAATCCTCAGGCTGGGATTTATAATCGACTTTC
EX886411       --> CTTTCAAGCCTCTCTTGGAATCCTCAGGCTGGGATTTATAATCGACTTTC
EV548851       --> CTTTCAAGCCTCTCTTGGAATCCTCAGGCTGGGATTTATAATCGACTTTC
EY933473       --> CTTTCAAGCCTCTCTTGGAATCCTCAGGCTGGGATTTATAATCGACTTTC
FD535014       --> CTTTCAAGCCTCTCTTGGAATCCTCAGGCTGGGATTTATAATCGACTTTC
FY447642       --> CTTTCAAGCCTCTCTTGGAATCCTCAGGCTGGGATTTATAATCGACTTTC
FY449416       --> CTTTCAAGCCTCTCTTGGAATCCTCAGGCTGGGATTTATAATCGACTTTC
FY449456       --> CTTTCAAGCCTCTCTTGGAATCCTCAGGCTGGGATTTATAATCGACTTTC
EW714600       --> CTTTCAAGCCTCTCTTGGAATCCTCAGGCTGGGATTTATAATCGACTTTC
EY916705       --> ..................................................
EW734594       --> ..................................................
EX895826       --> ..................................................

               601    -    651
UN16874        --> TATCAAAAGCAACATTGATAGGTTTTATGGCGGGTGCAGCCATAATAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX899847       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW716141       --> TATCAAAAGCAACATTGATAGGTTTTATGGCGGGTGCAGCCATAATAGTA  Raphanus sativus var. oleiformis
EX886411       --> TATCAAAAGCAACATTGATAGGTTTTATGGCGGGTGCAGCCATAATAGTA  Raphanus sativus var. oleiformis
EV548851       --> TATCAAAAGCAACATTGATAGGTTTTATGGCGGGTGCAGCCATAATAGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY933473       --> TATCAAAAGCAACATTGATAGGTTTTATGGCGGGTGCAGCCATAATAGTA  Raphanus sativus var. oleiformis
FD535014       --> TATCAAAAGCAACATTAATAGGTTTTATGGCGGGTGCAGCCATAATAGTA  Raphanus raphanistrum subsp. maritimus
FY447642       --> TATCAAAAGCAACATTAATAGGTTTTATGGCGGGTGCAGCCATAATAGTA  Raphanus sativus cv GSK3-1
FY449416       --> TATCAAAAGCAACATTAATAGGTTTTATGGCGGGTGCAGCCATAATAGTA  Raphanus sativus cv GSK3-1
FY449456       --> TATCAAAAGCAACATTAATAGGTTTTATGGCGGGTGCAGCCATAATAGTA  Raphanus sativus cv GSK3-1
EW714600       --> TATCAAAAGCGACATTGATAGGTTTTATGGCGGGTGCAGCCATAATAGTA  Raphanus sativus var. oleiformis
EY916705       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734594       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX895826       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               651    -    701
UN16874        --> TCATTGCAACAGCTAAAGGCTCTGCTTGGGATAACTCATTTCACTAAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX899847       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW716141       --> TCATTGCAACAGCTAAAGGCTCTGCTTGGGATAACTCATTTCACTAAGCA  Raphanus sativus var. oleiformis
EX886411       --> TCATTGCAACAGCTAAAG-CTCTGCTTGGGATAAC...............  Raphanus sativus var. oleiformis
EV548851       --> TCATTGCAACAGCTAAAGGCTCTGCTTGGGATAACTCATTTCACTAAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY933473       --> TCATTGCAACAGCT....................................  Raphanus sativus var. oleiformis
FD535014       --> TCATTGCAACAGCTAAAGGCTCTGCTAGGGATAACTCATTTCACTAAGCA  Raphanus raphanistrum subsp. maritimus
FY447642       --> TCATTGCAACAGCTAAAGGCTCTGCTAGGGATAACTCATTTCACTAAGCA  Raphanus sativus cv GSK3-1
FY449416       --> TCATTGCAACAGCTAAAGGCTCTACTAGGGATAACTCATTTCACTAAGCA  Raphanus sativus cv GSK3-1
FY449456       --> TCATTGCAACAGCTAAAGGCTCTACTAGGGATAACTCATTTCACTAAGCA  Raphanus sativus cv GSK3-1
EW714600       --> TCATTGCAACAGCTAAAGGCTCTGCTTGGGATAACTCATTTCACTAAGCA  Raphanus sativus var. oleiformis
EY916705       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734594       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX895826       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               701    -    751
UN16874        --> AATGAGTGTGATCCCTGTTCTCTCCTCTGTTTTCCACCACACCAACGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX899847       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW716141       --> AATGAGTGTAATCCCTGTTCTCTCCTCCGTTTTC-ACCACACCAACGAGT  Raphanus sativus var. oleiformis
EX886411       --> ..................................................  Raphanus sativus var. oleiformis
EV548851       --> AATGAGTGTAATCCCTGTTCTCTCCTCTGTTTTCCACCACACCAACGAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY933473       --> ..................................................  Raphanus sativus var. oleiformis
FD535014       --> AATGAGTGTGATCCCTGTTCTCTCCTCTGTTTTCCACCACACCAACGAGT  Raphanus raphanistrum subsp. maritimus
FY447642       --> AATGAGTGTGATCCCTGTTCTCTCCTCTGTTTTCCACCACACCAACGAGT  Raphanus sativus cv GSK3-1
FY449416       --> AATGAGTATGATCCCTGTTCTCTCCTCTGTTTTCCACCACACCAACGAGT  Raphanus sativus cv GSK3-1
FY449456       --> AATGAGTATGATCCCTGTTCTCTCCTCTGTTTTCCACCACACCAACGAGT  Raphanus sativus cv GSK3-1
EW714600       --> AATGAGTGTAATCCCTGTTCTCTCCTCTGTTTTCCACCACACCAACGAGT  Raphanus sativus var. oleiformis
EY916705       --> .........................................gCAACGAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734594       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX895826       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               751    -    801
UN16874        --> GGTCATGGCAAACGATTGTGATGGGATTCTGCTTCTTGCTGTTCTTGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX899847       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW716141       --> GGTCATAGCAAACGATTGTGATGGGAGTCTGCTT................  Raphanus sativus var. oleiformis
EX886411       --> ..................................................  Raphanus sativus var. oleiformis
EV548851       --> GGTCATGGCAAACGATTGTGATGGGAGTCTGCTTCTTGCTGTTCTTGCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY933473       --> ..................................................  Raphanus sativus var. oleiformis
FD535014       --> GGTCATGGCAAACGATTGTGATGGGATTCTG...................  Raphanus raphanistrum subsp. maritimus
FY447642       --> GGTCATGGCAAACGATTGTGATGGGATTCTGCTTCTTGCTGTTCTTGCTC  Raphanus sativus cv GSK3-1
FY449416       --> GGTCATGGCAAACGATTGTGATGGGATTCTGCTTCTTGCTGTTCTTGCTC  Raphanus sativus cv GSK3-1
FY449456       --> GGTCATGGCAAACGATTGTGATGGGATTCTGCTTCTTGCTGTTCTTGCTC  Raphanus sativus cv GSK3-1
EW714600       --> GGTCATGGCAAACGATTGTGATGGGAGTCTGCTTCTTGCTGTTCTTGCTC  Raphanus sativus var. oleiformis
EY916705       --> GGTCATGGCAAACGATTGTGATGGGATTCTGCTTCTTGCTGTTCTTGCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734594       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX895826       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               801    -    851
UN16874        --> GCCACACGTCACCTCAGCATGAAGAAGCCGAAGCTGTTCTGGGTCTCAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX899847       <-- ..................................................
EW716141       --> ..................................................
EX886411       --> ..................................................
EV548851       --> GCCACACGTCACCTCAGCATGAAGAAGCCGAAATTGTTCTGGGTCTCAGC
EY933473       --> ..................................................
FD535014       --> ..................................................
FY447642       --> GCCACACGTCACCTCAGCATGAAGAAGCCGAAGCTGTTCTGGGTCTCAGC
FY449416       --> GCCACACGTCACCTCAGCATGAAGAAGCCGAAGCTGTTCTGGGTCTCAGC
FY449456       --> GCCACACGTCACCTCAGCATGAAGAAGCCGAAGCTGTTCTGGGTCTCAGC
EW714600       --> GCCACACGTCACCTCAGCATGAAGAAGCTGAAATTGTTCTGGGTCTCAGC
EY916705       --> GCCACACGTCACCTCAGCATGAAGAAGCCGAAGCTGTTCTGGGTCTCAGC
EW734594       --> ..................................................
EX895826       --> ..................................................

               851    -    901
UN16874        --> TGGAGCTCCGCTACTCTCAGTTATCGTCTCTACACTTATCGTCTTTGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX899847       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW716141       --> ..................................................  Raphanus sativus var. oleiformis
EX886411       --> ..................................................  Raphanus sativus var. oleiformis
EV548851       --> TGGAGCTC-GCTACTCTCAGTTATAGTCTCTACACTTATCGTCTTgt...  Raphanus raphanistrum subsp. raphanistrum (NY)
EY933473       --> ..................................................  Raphanus sativus var. oleiformis
FD535014       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY447642       --> TGGAGCTCCGCTACTCTCAGTTACCGTCTCTACACTT.............  Raphanus sativus cv GSK3-1
FY449416       --> TGGAGCTCCGCTACTCTCAGTTACCGTCTCTACACTTATCG.........  Raphanus sativus cv GSK3-1
FY449456       --> TGGAGCTCCGCTACTCTCAGTTACCGTCTCTACACTTA............  Raphanus sativus cv GSK3-1
EW714600       --> TGGAGCTCCGCTACTCTCAGTTATAGTCTCTACACTTATCGTCTTTGTTT  Raphanus sativus var. oleiformis
EY916705       --> TGGAGCTCCGCTACTCTCAGTTATCGTCTCTACACTTATCGTATTTGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734594       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX895826       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               901    -    951
UN16874        --> CGAGAGCTGATCGTCATGGCATTAGCGTCATTGGGAAACTACAAGAAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX899847       <-- ..................................................
EW716141       --> ..................................................
EX886411       --> ..................................................
EV548851       --> ..................................................
EY933473       --> ..................................................
FD535014       --> ..................................................
FY447642       --> ..................................................
FY449416       --> ..................................................
FY449456       --> ..................................................
EW714600       --> CAAGAGCTGATCGTCATGGCATTAGCGTCATAGGGAAACTACAAGAAGGT
EY916705       --> CGAGAGCTGATCGTCATGGCATTAGCGTCATTGGGAAACTACAAGAAGGT
EW734594       --> ..................................................
EX895826       --> ..................................................

               951    -   1001
UN16874        --> TTGAATCCACCGTCTTGGAACATGCTTCAGTTCCACGGAAGTCATCTCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX899847       <-- ..................................................
EW716141       --> ..................................................
EX886411       --> ..................................................
EV548851       --> ..................................................
EY933473       --> ..................................................
FD535014       --> ..................................................
FY447642       --> ..................................................
FY449416       --> ..................................................
FY449456       --> ..................................................
EW714600       --> TTGAATCCACCGTCTTGGAACATGCTTCAGTTCCACGGAAGTCATCTCGG
EY916705       --> TTGAATCCACCGTCTTGGAACATGCTTCAGTTCCAAGGAAGTCATCTCGG
EW734594       --> ............gCTTGGAACATGCTTCAGTTCCACGGAAGTCATCTCGG
EX895826       --> ..................................................

               1001   -   1051
UN16874        --> ACTCGTTGCCAAAACAGGACTCATCACCGGAATCGTCTCCCTCACCGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX899847       <-- ..................................................
EW716141       --> ..................................................
EX886411       --> ..................................................
EV548851       --> ..................................................
EY933473       --> ..................................................
FD535014       --> ..................................................
FY447642       --> ..................................................
FY449416       --> ..................................................
FY449456       --> ..................................................
EW714600       --> ACTCGTTGCCAAAACAGGACTCATCACCGGAATCGTCTCCCTCACCGAAG
EY916705       --> ACTCGTTGCCAAAACAGGACTCATCACCGGAATCGTCTCCCTCACCGAAG
EW734594       --> ACTCGTTGCCAAAACAGGACTCATCACCGGAATCTTCTCCCTCACCGAAG
EX895826       --> ..................................................

               1051   -   1101
UN16874        --> GTATCGCAGTAGGAAGAACATTCGCAGCGGTAAAAAACTACCACGTAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX899847       <-- ..................................................
EW716141       --> ..................................................
EX886411       --> ..................................................
EV548851       --> ..................................................
EY933473       --> ..................................................
FD535014       --> ..................................................
FY447642       --> ..................................................
FY449416       --> ..................................................
FY449456       --> ..................................................
EW714600       --> GTATCGCAGTAGGAAGAACATTCGCAGCGGTAAAAA-CTACCACGTAGAC
EY916705       --> GTATCGCAGTAGGAAGAACATTCGCAGCGGTAAAAAACTACCACGTAGAC
EW734594       --> GTATCGCAGTAGGAAGAACATTCGCAGCGGTAAAAAACTACCACGTAGAC
EX895826       --> .................................................g

               1101   -   1151
UN16874        --> GGAAACAAAGAGATGATCGCCATAGGTCTAATGAACGTTGTCGGCTCCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX899847       <-- ..................................................
EW716141       --> ..................................................
EX886411       --> ..................................................
EV548851       --> ..................................................
EY933473       --> ..................................................
FD535014       --> ..................................................
FY447642       --> ..................................................
FY449416       --> ..................................................
FY449456       --> ..................................................
EW714600       --> GGAAACAAAGAGATGATCGCCATAGGTCTAATGAACGTTGTCG-CTCCGC
EY916705       --> GGAAACAAAGAGATGATCGCCATAGGTCTAATGAACGTTGTCGGCTCCGC
EW734594       --> GGAAACAAAGAGATGATCGCCATAGGTCTAATGAACGTTGTCGGCTCCGC
EX895826       --> GGAAACAAAGAAATGATCGCCATAGGTCTAATGAACGTTGTCGGCTCCGC

               1151   -   1201
UN16874        --> CACTTCATGCTACGTCACAACCGGAGCATTCTCTAGATCAGCCGTTAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX899847       <-- ..................................................
EW716141       --> ..................................................
EX886411       --> ..................................................
EV548851       --> ..................................................
EY933473       --> ..................................................
FD535014       --> ..................................................
FY447642       --> ..................................................
FY449416       --> ..................................................
FY449456       --> ..................................................
EW714600       --> CACTTCATGCTACGTCACAACCGGAGCATTCTCTAGATCAGCCGTTAACA
EY916705       --> CACTTCATGCTACGTCACAACCGGAGCATTCTCTAGATCAGCCGTTAACA
EW734594       --> CACTTCGTGCTACGTCACAACCGGAGCATTCTCTAGATCAGCCGTTAACA
EX895826       --> CACTTCATGCTACGTCACAACCGGAGCATTCTCTAGATCAGCCGTTAACA

               1201   -   1251
UN16874        --> ACAACGCCGGATGTAAAACCGCGGTTTCAAACATCGTGATGTCTGTCACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX899847       <-- ..................................................
EW716141       --> ..................................................
EX886411       --> ..................................................
EV548851       --> ..................................................
EY933473       --> ..................................................
FD535014       --> ..................................................
FY447642       --> ..................................................
FY449416       --> ..................................................
FY449456       --> ..................................................
EW714600       --> ACAACGCCCGATGTAAAACCGCGGTTTCAA-CATCGTGATGTCTGTCACC
EY916705       --> ACAACGCCGGATGTAAAACCGCGGTTTCAAACATCGTGATGTCTGTCACC
EW734594       --> ACAACGCCGGATGTAAAACCGCGGTTTCAAACATCGTGATGTCTGTCACC
EX895826       --> ACAACGCCGGATGTAAAACCGCGGTTTCAAACATCGTGATGTCTGTCACC

               1251   -   1301
UN16874        --> GTTATGGTCACACTCCTCTTCTTAATGCCGCTTTTCGAATACACTCCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX899847       <-- ..................................................
EW716141       --> ..................................................
EX886411       --> ..................................................
EV548851       --> ..................................................
EY933473       --> ..................................................
FD535014       --> ..................................................
FY447642       --> ..................................................
FY449416       --> ..................................................
FY449456       --> ..................................................
EW714600       --> GTTATGGTCACACTCCTCTTCTTAATGCCGCTTT-CG-ATACACTCCCAA
EY916705       --> GTTATGGTCACACTCCTCTTCTTAATGCCGCTTTTCGAATACACTCCCAA
EW734594       --> GTTATGGTCACACTCCTCTTCTTAATGCCGCTTTTCGAATACACTCCCAA
EX895826       --> GTTATGGTCACACTCCTCTTCTTAATGCCGCTTTTCGAATACACTCCCAA

               1301   -   1351
UN16874        --> CGTGGTCCTCGGTGCCATCATTGTGACCGCGGTCATTGGTCTCATCGACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX899847       <-- ..................................................
EW716141       --> ..................................................
EX886411       --> ..................................................
EV548851       --> ..................................................
EY933473       --> ..................................................
FD535014       --> ..................................................
FY447642       --> ..................................................
FY449416       --> ..................................................
FY449456       --> ..................................................
EW714600       --> CGTG..............................................
EY916705       --> CGTGGTCCTCGGTGCCATCATTGTGACCGCGGTCATTGGTCTCATCGACC
EW734594       --> CGTGGTCCTCGGTGCCATCATTGTGACCGCGGTCATTGGTCTCATCGACC
EX895826       --> TGTGGTCCTCGGTGCCATCATTGTGACCGCGGTCATTGGTCTCATTGACC

               1351   -   1401
UN16874        --> TTCCCGCAGCTCGTCATATATGGAGGATTGATAAGTTTGATTTCTTGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX899847       <-- ..................................................
EW716141       --> ..................................................
EX886411       --> ..................................................
EV548851       --> ..................................................
EY933473       --> ..................................................
FD535014       --> ..................................................
FY447642       --> ..................................................
FY449416       --> ..................................................
FY449456       --> ..................................................
EW714600       --> ..................................................
EY916705       --> TTCCCGCAGCTCGTCATATATGGAGGATTGATAAGTTTGATTTCTTGGTG
EW734594       --> TTCCCGCAGCTCGTCATATATGGAGGATTGATAAGTTTGATTTCTTGGTG
EX895826       --> TTCCCGCGGCTCGTCATATATGGAGGATTGATAAGTTTGATTTCTTGGTG

               1401   -   1451
UN16874        --> ATGTTATGCGCCTTCTTTGGTGTTGTTTTCTTGTCGGTCCAGAATGGTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX899847       <-- ..............CTTTGGTGTTGTTTTCTTGTCGGTCCAGAATGGTCT
EW716141       --> ..................................................
EX886411       --> ..................................................
EV548851       --> ..................................................
EY933473       --> ..................................................
FD535014       --> ..................................................
FY447642       --> ..................................................
FY449416       --> ..................................................
FY449456       --> ..................................................
EW714600       --> ..................................................
EY916705       --> ATGTTATGCGCCTTCTTTGGTGTTGTTTTCTTGTCGtcca..........
EW734594       --> ATGTTATGCGCCTTCTTTGGTGTTGTTTTCTTGTCGGTCCAGAACGGTCT
EX895826       --> ATGTTATGCGCCTTCTTTGGTGTTGTTTTCTTGTCGGTCCAGAATGGTCT

               1451   -   1501
UN16874        --> AGCTATAGCGGTGGGACTATCGTTGTTCAAGTTATTAATCCAAGTAACGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX899847       <-- AGCTATAGCGGTGGGACTATCGTTGTTCAAGTTATTAATCCAAGTAACGA
EW716141       --> ..................................................
EX886411       --> ..................................................
EV548851       --> ..................................................
EY933473       --> ..................................................
FD535014       --> ..................................................
FY447642       --> ..................................................
FY449416       --> ..................................................
FY449456       --> ..................................................
EW714600       --> ..................................................
EY916705       --> ..................................................
EW734594       --> AGCTATAGCGGTGGGACTATCGTTGTTCAAGTTATTAATGCAAGTAACGA
EX895826       --> AGCTATAGCGGTGGGACTATCGTTGTTCAAGTTATTAATCCAAGTAACGA

               1501   -   1551
UN16874        --> GGCCGAAGACGGTTATTATGGGGAATATTCCGGGGACGGATGTGTACCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX899847       <-- GGCCGAAGACGGTTATTATGGGGAATATTCCGGGGACGGATGTGTACCGT
EW716141       --> ..................................................
EX886411       --> ..................................................
EV548851       --> ..................................................
EY933473       --> ..................................................
FD535014       --> ..................................................
FY447642       --> ..................................................
FY449416       --> ..................................................
FY449456       --> ..................................................
EW714600       --> ..................................................
EY916705       --> ..................................................
EW734594       --> GGCCGAAGACGGTTATTATGGGGAATATTCCGGGGACGGATGTGTACCGT
EX895826       --> GGCCGAAGACGGTTATTATGGGGAATATTCCGGGGACGGATGTGTACCGT

               1551   -   1601
UN16874        --> AATCTTCATCATTACAAAGATGCACGAAG-ATCCCAGGGTTCCTTGTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX899847       <-- AATCTTCATCATTACAAAGATGCACGAAGGATCCCAGGGTTCCTTGTCCT
EW716141       --> ..................................................
EX886411       --> ..................................................
EV548851       --> ..................................................
EY933473       --> ..................................................
FD535014       --> ..................................................
FY447642       --> ..................................................
FY449416       --> ..................................................
FY449456       --> ..................................................
EW714600       --> ..................................................
EY916705       --> ..................................................
EW734594       --> AATCTTCATCATTACAAAGATCCACGAAG-ATCCCAGGGTTCCTTGTCCT
EX895826       --> AATCTTCATCATTACAAAGATGCACGAAGGATCCCAGGGTTCCTTGTCCT

               1601   -   1651
UN16874        --> AAGCATTGAATCTCCTGTCAATTTTGCCAATTCTAATTACCTCACCGAA-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX899847       <-- AAGCATTGAATCTCCTGTCAATTTTGCCAATTCTAATTACCTCACCGAAA
EW716141       --> ..................................................
EX886411       --> ..................................................
EV548851       --> ..................................................
EY933473       --> ..................................................
FD535014       --> ..................................................
FY447642       --> ..................................................
FY449416       --> ..................................................
FY449456       --> ..................................................
EW714600       --> ..................................................
EY916705       --> ..................................................
EW734594       --> AAGCATTGAATCTCCTGTCAATTTTGCCAATTCTAATTACCTCACCGAA-
EX895826       --> AAGCATTGAATCTCCTGTCAATTTTGCCAATTCTAATTACCTCACCGAAA

               1651   -   1701
UN16874        --> GAACATCTCGTTGGATAGAAGA-TGCGAAGA-GAGGA-GCGCAAGAGA-G
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX899847       <-- GAACATCTCGTTGGATAGAAGAATGCGAAGAAGAGGAAGCGCAAGAGAAG
EW716141       --> ..................................................
EX886411       --> ..................................................
EV548851       --> ..................................................
EY933473       --> ..................................................
FD535014       --> ..................................................
FY447642       --> ..................................................
FY449416       --> ..................................................
FY449456       --> ..................................................
EW714600       --> ..................................................
EY916705       --> ..................................................
EW734594       --> GAACATCTCGTTGGATAGAAGA-TGCGAAGA-GAGGA-GCGCAAGAGA-G
EX895826       --> GAACATCTCGTTGGATAGAAGAATGCGAAGAAGAGGAAGCGCAAGAGAAG

               1701   -   1751
UN16874        --> CAT-CTAGCCTTCGGT-CT-GAT-CT-GAA-TGTCAGCTGTGAGTGGGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX899847       <-- CATTCTAGCCTTCGGTTCTTGATTCTTGAAATGTCAGCTGTGAGTGGGGT
EW716141       --> ..................................................
EX886411       --> ..................................................
EV548851       --> ..................................................
EY933473       --> ..................................................
FD535014       --> ..................................................
FY447642       --> ..................................................
FY449416       --> ..................................................
FY449456       --> ..................................................
EW714600       --> ..................................................
EY916705       --> ..................................................
EW734594       --> CAT-CTAGCCTTCGGT-CT-GAT-CT-GAA-TGTCAGCTGTGAGTGGGt.
EX895826       --> CATTCTAGCCTTCGGTTCTTGATTCTTGAAATGTCAGCTGTGAGTGGGGT

               1751   -   1801
UN16874        --> GGACACAAACGGAGTCTCGTTCTTTAAGGAATTAAAGAAAACCACAGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX899847       <-- GGACACAAACGGAGTCTCGTTCTTTAAGGAATTAAAGAAAACCACAGCAA
EW716141       --> ..................................................
EX886411       --> ..................................................
EV548851       --> ..................................................
EY933473       --> ..................................................
FD535014       --> ..................................................
FY447642       --> ..................................................
FY449416       --> ..................................................
FY449456       --> ..................................................
EW714600       --> ..................................................
EY916705       --> ..................................................
EW734594       --> ..................................................
EX895826       --> GGACACA...........................................

               1801   -   1851
UN16874        --> AGAATAACATCGAGCTTGTGTTTGTGAACCCATTAAGTGAAGTGATGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX899847       <-- AGAATAACATCGAGCTTGTGTTTGTGAACCCATTAAGTGAAGTGATGGAG
EW716141       --> ..................................................
EX886411       --> ..................................................
EV548851       --> ..................................................
EY933473       --> ..................................................
FD535014       --> ..................................................
FY447642       --> ..................................................
FY449416       --> ..................................................
FY449456       --> ..................................................
EW714600       --> ..................................................
EY916705       --> ..................................................
EW734594       --> ..................................................
EX895826       --> ..................................................

               1851   -   1901
UN16874        --> AAGCTACAAAGAGCTGACGAAGAAGAAGAGTTCATGAGGCCTGAGTTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX899847       <-- AAGCTACAAAGAGCTGACGAAGAAGAAGAGTTCATGAGGCCTGAGTTTCT
EW716141       --> ..................................................
EX886411       --> ..................................................
EV548851       --> ..................................................
EY933473       --> ..................................................
FD535014       --> ..................................................
FY447642       --> ..................................................
FY449416       --> ..................................................
FY449456       --> ..................................................
EW714600       --> ..................................................
EY916705       --> ..................................................
EW734594       --> ..................................................
EX895826       --> ..................................................

               1901   -   1951
UN16874        --> CTTCTTGACTGTTTCTGAGGCCGTTGCGTCGCTCTCTCTTAAAGGAGGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX899847       <-- CTTCTTGACTGTTTCTGAGGCCGTTGCGTCGCTCTCTCTTAAAGGAGGCC
EW716141       --> ..................................................
EX886411       --> ..................................................
EV548851       --> ..................................................
EY933473       --> ..................................................
FD535014       --> ..................................................
FY447642       --> ..................................................
FY449416       --> ..................................................
FY449456       --> ..................................................
EW714600       --> ..................................................
EY916705       --> ..................................................
EW734594       --> ..................................................
EX895826       --> ..................................................

               1951   -   2001
UN16874        --> CATCTCTCAATAGCGTTTGACACTAAAGATTTTGTTTTATCGGTCCAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX899847       <-- CATCTCTCAATAGCGTTTGACACTAAAGATTTTGTTTTATCGGTCCAAAT
EW716141       --> ..................................................
EX886411       --> ..................................................
EV548851       --> ..................................................
EY933473       --> ..................................................
FD535014       --> ..................................................
FY447642       --> ..................................................
FY449416       --> ..................................................
FY449456       --> ..................................................
EW714600       --> ..................................................
EY916705       --> ..................................................
EW734594       --> ..................................................
EX895826       --> ..................................................

               2001   -   2051
UN16874        --> ATGATATTTGGCAGATGGTTAAAGGTCCCCTTCTTTTTCTATTTTCAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX899847       <-- ATGATATTTGGCAGATGGTTAAAGGTCCCCTTCTTTTTCTATTTTCAGTA
EW716141       --> ..................................................
EX886411       --> ..................................................
EV548851       --> ..................................................
EY933473       --> ..................................................
FD535014       --> ..................................................
FY447642       --> ..................................................
FY449416       --> ..................................................
FY449456       --> ..................................................
EW714600       --> ..................................................
EY916705       --> ..................................................
EW734594       --> ..................................................
EX895826       --> ..................................................

               2051   -   2101
UN16874        --> CAGCTAAGTTGTATGCTATGTTCATTTCTCTTTCTCTATCATTGAATTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX899847       <-- CAGCTAAGTTGTATGCTATGTTCATTTCTCTTTCTCTATCATTGAATTGA
EW716141       --> ..................................................
EX886411       --> ..................................................
EV548851       --> ..................................................
EY933473       --> ..................................................
FD535014       --> ..................................................
FY447642       --> ..................................................
FY449416       --> ..................................................
FY449456       --> ..................................................
EW714600       --> ..................................................
EY916705       --> ..................................................
EW734594       --> ..................................................
EX895826       --> ..................................................

               2101   -   2151
UN16874        --> TCAAGAATCTCAAGATGTATGTTTTGGTATTAGCTTTTGCTAATATGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX899847       <-- TCAAGAATCTCAAGATGTATGTTTTGGTATTAGCTTTTGCTAATATGGAG
EW716141       --> ..................................................
EX886411       --> ..................................................
EV548851       --> ..................................................
EY933473       --> ..................................................
FD535014       --> ..................................................
FY447642       --> ..................................................
FY449416       --> ..................................................
FY449456       --> ..................................................
EW714600       --> ..................................................
EY916705       --> ..................................................
EW734594       --> ..................................................
EX895826       --> ..................................................

               2151   -   2201
UN16874        --> TTTAGCCG
                   ~~~~~~~~
EX899847       <-- TTTAGCCG
EW716141       --> ........
EX886411       --> ........
EV548851       --> ........
EY933473       --> ........
FD535014       --> ........
FY447642       --> ........
FY449416       --> ........
FY449456       --> ........
EW714600       --> ........
EY916705       --> ........
EW734594       --> ........
EX895826       --> ........