1      -     51
UN16877        --> GATTTGAATTTATGAAAGTTATAAACTCCAGTGGCAATCACATAGACAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD562819       <-- GATTTGAATTTATGAAAGT-ATAAACTCCAGTGGCAATCACATAGACAAC
FD579295       <-- ...........................CCAGTGGCAATCACATAGACAAC
FD957356       <-- ..................................................
FD970495       <-- ..................................................
FD947976       <-- ..................................................
EX902616       <-- ..................................................
EX754468       <-- ..................................................
FD549575       <-- ..................................................
FD972994       <-- ..................................................
FY439379       <-- ..................................................
EV537169       <-- ..................................................
FD962944       <-- ..................................................
FY431427       <-- ..................................................
FD578176       <-- ..................................................
EW725140       <-- ..................................................
FD559633       <-- ..................................................
FD989058       <-- ..................................................
EX905460       <-- ..................................................
FD559907       <-- ..................................................
EY948169       <-- ..................................................
EV537899       <-- ..................................................
EX756167       <-- ..................................................
FD962423       <-- ..................................................
FD566633       --> .................GTTATAAACTCCAGTGGCAATCACATAGACAAC
FD583305       --> ...........................CCAGTGGCAATCACATAGACAAC
FD953071       --> ..................................................
EV542039       --> ..................................................
FD943825       --> ..................................................
EX906844       --> ..................................................
EX758785       --> ..................................................
FD545624       --> ..................................................
EY943921       --> ..................................................
FD968771       --> ..................................................
EV541464       --> ..................................................
FD959387       --> ..................................................
FD984887       --> ..................................................
EX760035       --> ..................................................

               51     -    101
UN16877        --> TGTTATTACCAAGACTTACTCAAAGATCATCAAAACTCAAAAA-GCATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD562819       <-- TGTTATTACCAAGACTTACTCAAAGATCATCAAAACTCAAAAA-GCATGG  Raphanus sativus var. oleiformis
FD579295       <-- TGTTATTACCAAGACTTACTCAAAGATCATCAAAACTCAAAAA-GCATGG  Raphanus sativus cv Rat-Tail Radish #3870
FD957356       <-- .......ACCAAGACTTACTCAAAGATCATCAAAACTCAAAAG-GCATGG  Raphanus sativus cv Rat-Tail Radish #3870
FD970495       <-- .......................AGATCATCAAAACTCAAAAA-GCATGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD947976       <-- .........................ATCATCAAAACTCAAAAAAGCATGG  Raphanus sativus cv Early Scarlet Globe
EX902616       <-- .......................cggTCATCAAAACTCAAAAA-GCATGG  Raphanus sativus cv Rat-Tail Radish #3870
EX754468       <-- ...........................CATCAAAACTCAAAAG-GCATGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549575       <-- ..............................CAAAACTCAAAAAAGCATGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD972994       <-- .........................ttttttttAACTCAAAAAAGCATTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FY439379       <-- ..................................ACTCAAAAA-GCATGG  Raphanus sativus cv GSK3-1
EV537169       <-- ................................................GG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962944       <-- ................................................GG  Raphanus raphanistrum subsp. maritimus
FY431427       <-- ................................................GG  Raphanus sativus cv GSK3-1
FD578176       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW725140       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD559633       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD989058       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX905460       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD559907       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY948169       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV537899       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX756167       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962423       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD566633       --> TGTTATTACCAAGACTTACTCAAAGATCATCAAAACTCAAAAA-GCATGG  Raphanus sativus var. oleiformis
FD583305       --> TGTTATTACCAAGACTTACTCAAAGATCATCAAAACTCAAAAA-GCATGG  Raphanus sativus cv Rat-Tail Radish #3870
FD953071       --> .......ACCAAGACTTACTCAAAGATCATCAAAACTCAAAAG-GCATGG  Raphanus sativus cv Rat-Tail Radish #3870
EV542039       --> .................gCTCAAAGATCATCAAAACTCAAAAA-GCATGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD943825       --> ........................GATCATCAAAACTCAAAAAAGCATGG  Raphanus sativus cv Early Scarlet Globe
EX906844       --> .......................cggTCATCAAAACTCAAAAA-GCATGG  Raphanus sativus cv Rat-Tail Radish #3870
EX758785       --> ...........................CATCAAAACTCAAAAG-GCATGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545624       --> ..............................CAAAACTCAAAAAAGCATGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY943921       --> .............................cgAAAACTCAAAAAAGCATGG  Raphanus sativus cv Rat-Tail Radish #3870
FD968771       --> ........................tttttttttAACTCAAAAAAGCATTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541464       --> ................................................GG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD959387       --> ................................................GG  Raphanus raphanistrum subsp. maritimus
FD984887       --> ..................................................  Raphanus raphanistrum subsp. landra
EX760035       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               101    -    151
UN16877        --> AATAGAAAAAGAGTCTTAACTTTCAGTTTCAGACATAAGTCTAGAATCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD562819       <-- AATAGAAAAAGAGTCTTAACTTTCAGTTTCAGACATAAGTCTAGAATCAA  Raphanus sativus var. oleiformis
FD579295       <-- AATAGAAAAAGAGTCTTAACTTTCAGTTTCAGACATAAGTCTAGAATCAA  Raphanus sativus cv Rat-Tail Radish #3870
FD957356       <-- AATAGAAAAAGAGTCTTAACTTTCAGTTTCAGACATAAGTCTAGAATCAA  Raphanus sativus cv Rat-Tail Radish #3870
FD970495       <-- AACAGAAAAAGAGTCTTAACTTTCAGTTTCAGACACAAGACTAGAATCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD947976       <-- AATAGAAAAAGAGTCTTAACATTCAGTTTCAGACATAAGTCTAGAATCAA  Raphanus sativus cv Early Scarlet Globe
EX902616       <-- AATAGAAAAAGAGTCTTAACTTTCAGTTTCAGACATAAGTCTAGAATCAA  Raphanus sativus cv Rat-Tail Radish #3870
EX754468       <-- AACAGAAAAAGAGTCTTAACTTTCAGTTTCAGACACAAGACTAGAATCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549575       <-- AATAGAAAAAGAGTCTTAACTTTCAGTTTCAGACATAAGTCTAGAATCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD972994       <-- AATAGAAAAAGAGTCTTAACTTTCAGTTTCAGACATAAGTCTAGAATCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY439379       <-- AATAGAAAAAGAGTCTTAACTTTCAGTTTCAGACATAAGTCTAGAATCAA  Raphanus sativus cv GSK3-1
EV537169       <-- AACAGAAAAAGAGTCTTAACTTTCAGTTTCAGACACAAGACTAGAATCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962944       <-- AATAGAAAAAGAGTCTTAACTTTCAGTTTCAGACATAAGTCTAGAATCAA  Raphanus raphanistrum subsp. maritimus
FY431427       <-- AATAGAAAAAGAGTCTTAACTTTCAGTTTCAGACATAAGTCTAGAATCAA  Raphanus sativus cv GSK3-1
FD578176       <-- .ATAGAAAAAGAGTCTTAACATTCAGTTTCAGACATAAGTCTAGAATCAA  Raphanus sativus cv Rat-Tail Radish #3870
EW725140       <-- ...AGAAAAAGAGTCTTAACTTTCAGTTTCAGACATAAGTCTAGAATCAA  Raphanus sativus cv Early Scarlet Globe
FD559633       <-- ...AGAAAAAGAGTCTTAACTT-CAGTT-CAGACACAAGTCTAGAATCAA  Raphanus raphanistrum subsp. landra
FD989058       <-- ...AGAAAAAGAGTCTTAACTTTCAGTTTCAGACACAAGCCTAGAATCAA  Raphanus raphanistrum subsp. landra
EX905460       <-- ....GAAAAAGAGTCTTAACATTCAGTTTCAGACATAAGTCTAGAATCAA  Raphanus sativus cv Rat-Tail Radish #3870
FD559907       <-- .....AAAAAGAGTCTTAACTTTCAGTTTCAGACACAAGTCTAGAATCAA  Raphanus raphanistrum subsp. landra
EY948169       <-- .........AGAGTCTTAACATTCAGTTTCAGACATAAGTCTAGAATCAA  Raphanus sativus cv Rat-Tail Radish #3870
EV537899       <-- ..........................................AGAATCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX756167       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962423       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD566633       --> AATAGAAAAAGAGTCTTAACTTTCAGTTTCAGACATAAGTCTAGAATCAA  Raphanus sativus var. oleiformis
FD583305       --> AATAGAAAAAGAGTCTTAACTTTCATTTTCAGACATAAGTCTAGAATCAA  Raphanus sativus cv Rat-Tail Radish #3870
FD953071       --> AATAGAAAAAGAGTCTTAACTTTCAGTTTCAGACATAAGTCTAGAATCAA  Raphanus sativus cv Rat-Tail Radish #3870
EV542039       --> AACAGAAAAAGAGTCTTAACTTTCAGTTTCAGACACAAGACTAGAATCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD943825       --> AATAGAAAAAGAGTCTTAACATTCAGTTTCAGACATAAGTCTAGAATCAA  Raphanus sativus cv Early Scarlet Globe
EX906844       --> AATAGAAAAAGAGTCTTAACTTTCAGTTTCAGACATAAGTCTAGAATCAA  Raphanus sativus cv Rat-Tail Radish #3870
EX758785       --> AACAGAAAAAGAGTCTTAACTTTCAGTTTCAGACACAAGACTAGAATCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545624       --> AATAGAAAAAGAGTCTTAACTTTCAGTTTCAGACATAAGTCTAGAATCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY943921       --> AATAGAAAAAGAGTCTTAACATTCAGTTTCAGACATAAGTCTAGAATCAA  Raphanus sativus cv Rat-Tail Radish #3870
FD968771       --> AATAGAAAAAGAGTCTTAACTTTCAGTTTCAGACATAAGTCTAGAATCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541464       --> AACAGAAAAAGAGTCTTAACTTTCAGTTTCAGACACAAGACTAGAATCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD959387       --> AATAGAAAAAGAGTCTTAACTTTCAGTTTCAGACATAAGTCTAGAATCAA  Raphanus raphanistrum subsp. maritimus
FD984887       --> ...AGAAAAAGAGTCTTAACTTTCAGTTTCAGACACAAGCCTAGAATCAA  Raphanus raphanistrum subsp. landra
EX760035       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               151    -    201
UN16877        --> AAGACATAAACACTCGAAATGCAACTCTTTTGTCCCTAACAGTGAAGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD562819       <-- AAGACATAAACACTCGAAATGCAACTCTTTTGTCCCTAACAGTGAAGAAA  Raphanus sativus var. oleiformis
FD579295       <-- AAGACATAAACACTCGAAATGCAACTCTTTTGTCCCTAACAGTGAAGAAA  Raphanus sativus cv Rat-Tail Radish #3870
FD957356       <-- AAGACATAAACACTCGAAATGCAACTCTTTTGTCCCTAACAGTGAAGAAA  Raphanus sativus cv Rat-Tail Radish #3870
FD970495       <-- AAGACATAAACACTCGAAATGCAACTCTTTTGTCCCTAACAGTGAAGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD947976       <-- AAGACATAAACACTCGAAATGCAACTCTTTTGTCCCTAACAATGAAGAAA  Raphanus sativus cv Early Scarlet Globe
EX902616       <-- AAGACATAAACACTCGAAATGCAACTCTTTTGTCCCTAACAGTGAAGAAA  Raphanus sativus cv Rat-Tail Radish #3870
EX754468       <-- AAGACATAAACACTCGAAATGCAACTCTTTTGTCCCTAACAGTGAAGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549575       <-- AAGACATAAACACTCGAAATGCAACTCTTTTGTCCATAACAGTGAAGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD972994       <-- AAGACATAAAAACTCGAAATGTAACTCTTTTGTCCCTAACAGTGAAGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY439379       <-- AAGACATAAACACTCGAAATGCAACTCTTTTGTCCCTAACAGTGAAGAAA  Raphanus sativus cv GSK3-1
EV537169       <-- AAGACATAAACACTCGAAATGCAACTCTTTTGTCCCTAACAGTGAAGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962944       <-- AAGACATAAACACTCGAAATGTAACTCTTTTGTCCCTAACAGTGAAGAAA  Raphanus raphanistrum subsp. maritimus
FY431427       <-- AAGACATAAACACTCGAAATGCAACTCTTTTGTCCCTAACAGTGAAGAAA  Raphanus sativus cv GSK3-1
FD578176       <-- AAGACATAAACACTCGAAATGCAACTCTTTTGTCCCTAACAATGAAGAAA  Raphanus sativus cv Rat-Tail Radish #3870
EW725140       <-- AAGACATAAACACTCGAAATGCAACTCTTTTGTCCCTAACAGTGAAGAAA  Raphanus sativus cv Early Scarlet Globe
FD559633       <-- AAGACATAAACACTCGAAATGCAACTCTTTTGTCCCTAACAGTGAAGAAA  Raphanus raphanistrum subsp. landra
FD989058       <-- AAGACATAAACACTCGAAATGCAACTCTGTTGTCCCTAACAGTGAAGAAA  Raphanus raphanistrum subsp. landra
EX905460       <-- AAGACATAAACACTCGAAATGCAACTCTTTTGTCCCTAACAATGAAGAAA  Raphanus sativus cv Rat-Tail Radish #3870
FD559907       <-- AAGACATAAACACTCGAAATGCAACTCTTTTGTCCCTAACAGTGAAGAAA  Raphanus raphanistrum subsp. landra
EY948169       <-- AAGACATAAACACTCGAAATGCAACTCTTTTGTCCCTAACAATGAAGAAA  Raphanus sativus cv Rat-Tail Radish #3870
EV537899       <-- AAGACATAAACACTCGAAATGCAACTCTTTTGTCCCTAACAGTGAAGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX756167       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962423       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD566633       --> AAGACATAAACACTCGAAATGCAACTCTTTTGTCCCTAACAGTGAAGAAA  Raphanus sativus var. oleiformis
FD583305       --> AAGACATAAACACTCGAAATGCAACTCTTTTGTCCCTAACAGTGAAAAAA  Raphanus sativus cv Rat-Tail Radish #3870
FD953071       --> AAGACATAAACACTCGAAATGCAACTCTTTTGTCCCTAACAGTGAAGAAA  Raphanus sativus cv Rat-Tail Radish #3870
EV542039       --> AAGACATAAACACTCGAAATGCAACTCTTTTGTCCCTAACAGTGAAGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD943825       --> AAGACATAAACACTCGAAATGCAACTCTTTTGTCCCTAACAATGAAGAAA  Raphanus sativus cv Early Scarlet Globe
EX906844       --> AAGACATAAACACTCGAAATGCAACTCTTTTGTCCCTAACAGTGAAGAAA  Raphanus sativus cv Rat-Tail Radish #3870
EX758785       --> AAGACATAAACACTCGAAATGCAACTCTTTTGTCCCTAACAGTGAAGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545624       --> AAGACATAAACACTCGAAATGCAACTCTTTTGTCCATAACAGTGAAGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY943921       --> AAGACATAAACACTCGAAATGCAACTCTTTTGTCCCTAACAATGAAGAAA  Raphanus sativus cv Rat-Tail Radish #3870
FD968771       --> AAGACATAAAAACTCGAAATGTAACTCTTTTGTCCCTAACAGTGAAGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541464       --> AAGACATAAACACTCGAAATGCAACTCTTTTGTCCCTAACAGTGAAGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD959387       --> AAGACATAAACACTCGAAATGTAACTCTTTTGTCCCTAACAGTGAAGAAA  Raphanus raphanistrum subsp. maritimus
FD984887       --> AAGACATAAACACTCGAAATGCAACTCTGTTGTCCCTAACAGTGAAGAAA  Raphanus raphanistrum subsp. landra
EX760035       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               201    -    251
UN16877        --> AAAA-AACAACAGCCAAACAAACTCTCCTCAGAACCTTCTGGGTGGCCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD562819       <-- TAAA-AACAACAGTCAAACAAACTCTCCTCAGAACCTTCTGGGTGGCCTG  Raphanus sativus var. oleiformis
FD579295       <-- TAAA-AACAACAGTCAAACAAACTCTCCTCAGAACCTTCTGGGTGGCCTG  Raphanus sativus cv Rat-Tail Radish #3870
FD957356       <-- TAAA-AACAACAGTCAAACAAACTCTCCTCAGAACCTTCTGGGTGGCCTG  Raphanus sativus cv Rat-Tail Radish #3870
FD970495       <-- AAAA-AACAACAGCCAAACACACTATCCTCAGAACCTTCTGGGTGGCCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD947976       <-- AAAA-AACAACAGCCAAACACACACTCCTCAGAACCTTCTGGGTGGCCTG  Raphanus sativus cv Early Scarlet Globe
EX902616       <-- TAAA-AACAACAGTCAAACAAACTCTCCTCAGAACCTTCTGGGTGGCCTG  Raphanus sativus cv Rat-Tail Radish #3870
EX754468       <-- AAAA-AACAACAGCCAAACACACTATCCTCAGAACCTTCTGGGTGGCCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549575       <-- AAAAGAACAACAGCCAAACACACTCTCCTCAGAACCTTCTGGGTGGCCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD972994       <-- AAAA-A-CAACAGCCAAATAAACTCTCCTCAGAACCTTCTGGGTGGCCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FY439379       <-- TAAA-AACAACAGTCAAACAAACTCTCCTCAGAACCTTCTGGGTGGCCTG  Raphanus sativus cv GSK3-1
EV537169       <-- AAAA-AACAACAGCCAAACACACTATCCTCAGAACCTTCTGGGTGGCCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962944       <-- AAAA-AACAACAGCCAAACAAACTCTCCTCAGAACCTTCTGGGTGGCCTG  Raphanus raphanistrum subsp. maritimus
FY431427       <-- TAAA-AACAACAGTCAAACAAACTCTCCTCAGAACCTTCTGGGTGGCCTG  Raphanus sativus cv GSK3-1
FD578176       <-- AAAA-AACAACAGCCAAACACACACTCCTCAGAACCTTCTGGGTGGCCTG  Raphanus sativus cv Rat-Tail Radish #3870
EW725140       <-- TAAA-AACAACAGTCAAACAAACTCTCCTCAGAACCTTCTGGGTGGCCTG  Raphanus sativus cv Early Scarlet Globe
FD559633       <-- TAAA-AACAACAGCCAAACAAACTCTCCTCAGAACCTTCTGGGTGGCCTG  Raphanus raphanistrum subsp. landra
FD989058       <-- TAAA-AACAACAGCCAAACAAACTCTCCTCAGAACCTTCTGGGTGGCCTG  Raphanus raphanistrum subsp. landra
EX905460       <-- AAAA-AACAACAGCCAAACACACACTCCTCAGAACCTTCTGGGTGGCCTG  Raphanus sativus cv Rat-Tail Radish #3870
FD559907       <-- TAAA-AACAACAGCCAAACAAACTCTCCTCAGAACCTTCTGGGTGGCCTG  Raphanus raphanistrum subsp. landra
EY948169       <-- AAAA-AACAACAGCCAAACACACACTCCTCAGAACCTTCTGGGTGGCCTG  Raphanus sativus cv Rat-Tail Radish #3870
EV537899       <-- AAAA-AACAACAGCCAAACACACTATCCTCAGAACCTTCTGGGTGGCCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX756167       <-- ......................ctaTCCTCAGAACCTTCTGGGTGGCCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962423       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD566633       --> TAAA-AACAACAGTCAAACAAACTCTCCTCAGAACCTTCTGGGTGGCCTG  Raphanus sativus var. oleiformis
FD583305       --> TAAA-AACAACAGTCAAACAAACTCTCCTCAAAACCTTCTGGGTGGCCTG  Raphanus sativus cv Rat-Tail Radish #3870
FD953071       --> TAAA-AACAACAGTCAAACAAACTCTCCTCAAAACCTTCTGGGTGGCCTG  Raphanus sativus cv Rat-Tail Radish #3870
EV542039       --> AAAA-AACAACAGCCAAACACACTATCCTCAGAACCTTCTGGGTGGCCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD943825       --> AAAA-AACAACAGCCAAACACACACTCCTCAGAACCTTCTGGGTGGCCTG  Raphanus sativus cv Early Scarlet Globe
EX906844       --> TAAA-AACAACAGTCAAACAAACTCTCCTCAAAACCTTCTGGGTGGCCTG  Raphanus sativus cv Rat-Tail Radish #3870
EX758785       --> AAAA-AACAACAGCCAAACACACTATCCTCAAAACCTTCTGGGTGGCCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545624       --> AAAAGAACAACAGCCAAACACACTCTCCTCAGAACCTTCTGGGTGGCCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY943921       --> AAAA-AACAACAGCCAAACACACACTCCTCAGAACCTTCTGGGTGGCCTG  Raphanus sativus cv Rat-Tail Radish #3870
FD968771       --> AAAA-A-CAACAGCCAAATAAACTCTCCTCAGAACCTTCTGGGTGGCCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541464       --> AAAA-AACAACAGCCAAACACACTATCCTCAGAACCTTCTGGGTGGCCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD959387       --> AAAA-AACAACAGCCAAACAAACTCTCCTCAGAACCTTCTGGGTGGCCTG  Raphanus raphanistrum subsp. maritimus
FD984887       --> TAAA-AACAACAGCCAAACAAACTCTCCTCAAAACCTTCTGGGTGGCCTG  Raphanus raphanistrum subsp. landra
EX760035       --> ....................................TTCTGGGGGGCCTG  Raphanus raphanistrum subsp. raphanistrum (MS)

               251    -    301
UN16877        --> TTAAAAGTAGGTGCCGGAGCCTGTGTCTCGACTATAGAGACGCCAGGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD562819       <-- TTAAAAGTAGGTGCCGGAGCCTGTGTCTCGACTATAGAGACGCCAGGAGT
FD579295       <-- TTAAAAGTAGGTGCCGGAGCCTGTGTCTCGACTATAGAGACGCCAGGAGT
FD957356       <-- TTAAAAGTAGGTGCCGGAGCCTGTGTCTCGACTATAGAGACGCCAGGAGT
FD970495       <-- TTAAAAGTAGGTGCCGGAGCCTGTGTCTCGACAATAGAGACGCCAGGAGT
FD947976       <-- TTAAAAGTAGTTGCCGGAGCCTGTGTCTCGACTATAGAGACGCCGGGAGT
EX902616       <-- TTAAAAGTAGGTGCCGGAGCCTGTGTCTCGACTATAGAGACGCCAGGAGT
EX754468       <-- TTAAAAGTAGGTGCCGGAGCCTGTGTCTCGACAATAGAGACGCCAGGAGT
FD549575       <-- TTAAAAGTAGGTGCCGGAGCCTGTGTCTCGACTATAGAGACGCCAGGAGT
FD972994       <-- TTAAAAGTAGGTGCCGGAGCCTGTGTCTCGACTATAGAGACGCCGGGAGT
FY439379       <-- TTAAAAGTAGGTGCCGGAGCCTGTGTCTCGACTATAGAGACGCCAGGAGT
EV537169       <-- TTAAAAGTAGGTGCCGGAGCCTGTGTCTCGACAATAGAGACGCCAGGAGT
FD962944       <-- TTAAAAGTAGGTGCCGGAGCCTGTGTCTCGACTATAGAGACGCCAGGAGT
FY431427       <-- TTAAAAGTAGGTGCCGGAGCCTGTGTCTCGACTATAGAGACGCCAGGAGT
FD578176       <-- TTAAAAGTAGTTGCCGGAGCCTGTGTCTCGACTATAGAGACGCCGGGAGT
EW725140       <-- TTAAAAGTAGGTGCCGGAGCCTGTGTCTCGACTATAGAGACGCCAGGAGT
FD559633       <-- TTAAAAGTAGGTGCCGGAGCCTGTGTCTCGACTATAGAGACGCCAGGAGT
FD989058       <-- TTAAAAGTAGGTGCCGGAGCCTGTGTCTCGACTATAGAGACGCCGGGAGT
EX905460       <-- TTAAAAGTAGTTGCCGGAGCCTGTGTCTCGACTATAGAGACGCCGGGAGT
FD559907       <-- TTAAAAGTAGGTGCCGGAGCCTGTGTCTCGACTATAGAGACGCCGGGAGT
EY948169       <-- TTAAAAGTAGTTGCCGGAGCCTGTGTCTCGACTATAGAGACGCCGGGAGT
EV537899       <-- TTAAAAGTAGGTGCCGGAGCCTGTGTCTCGACAATAGAGACGCCAGGAGT
EX756167       <-- TTAAAAGTAGGTGCCGGAGCCTGTGTCTCGACAATAGAGACGCCAGGAG-
FD962423       <-- ..................................................
FD566633       --> TTAAAAGTAGGTGCCGGAGCCTGTGTCTCGACTATAGAGACGCCAGGAGT
FD583305       --> TTAAAAGTAGGTGCCGGAGCCTGTGTCTCGACTATAGAGACGCCAGGAGT
FD953071       --> TTAAAAGTAGGTGCCGGAGCCTGTGTCTCGACTATAGAGACGCCAGGAGT
EV542039       --> TTAAAAGTAGGTGCCGGAGCCTGTGTCTCGACAATAGAGACGCCAGGAGT
FD943825       --> TTAAAAGTAGTTGCCGGAGCCTGTGTCTCGACTATAGAGACGCCGGGAGT
EX906844       --> TTAAAAGTAGGTGCCGGAGCCTGTGTCTCGACTATAGAGACGCCAGGAGT
EX758785       --> TTAAAAGTAGGTGCCGGAGCCTGTGTCTCGACAATAGAGACGCCAGGAGT
FD545624       --> TTAAAAGTAGGTGCCGGAGCCTGTGTCTCGACTATAGAGACGCCAGGAGT
EY943921       --> TTAAAAGTAGTTGCCGGAGCCTGTGTCTCGACTATAGAGACGCCGGGAGT
FD968771       --> TTAAAAGTAGGTGCCGGAGCCTGTGTCTCGACTATAGAGACGCCGGGAGT
EV541464       --> TTAAAAGTAGGTGCCGGAGCCTGTGTCTCGACAATAGAGACGCCAGGAGT
FD959387       --> TTAAAAGTAGGTGCCGGAGCCTGTGTCTCGACTATAGAGACGCCAGGAGT
FD984887       --> TTAAAAGTAGGTGCCGGAGCCTGTGTCTCGACTATAGAGACGCCGGGAGT
EX760035       --> TTAAAAGTAGGTGCCGGAACCTGTGTCTCGACAATAGAGACGCCAGGAG-

               301    -    351
UN16877        --> GTCACCCATTCCAAGGGAAGCAAGCATCTCGAGAGTCTCTTTGTCGACCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD562819       <-- GTCACCCATTCCAAGGGAAGCAAGCATCTAGAGAGTCTCTTTGTCGACCT
FD579295       <-- GTCACCCATTCCAAGGGAAGCAAGCATCTCGAGAGTCTCTTTGTCGACCT
FD957356       <-- GTCACCCATTCCAAGGGAAGCAAGCATCTCGAGAGTCTCTTTGTCGACCT
FD970495       <-- GTCACCCATTCCAAGGGAAGCAAGCATCTCGAGAGTCTCTTTGTCGACCT
FD947976       <-- GTCACCCATTCCAAGGGAGGCAAGCATCTCGAGAGTCTCTTTATCGACCT
EX902616       <-- GTCACCCATTCCAAGGGAAGCAAGCATCTCGAGAGTCTCTTTGTCGACCT
EX754468       <-- GTCACCCATTCCAAGGGAAGCAAGCATCTCGAGAGTCTCTTTGTCGACCT
FD549575       <-- GTCACCCATTCCAAGGGAAGCAAGCATCTCGAGAGTCTCTTTGTCGACCT
FD972994       <-- GTCACCCATTCCAAGGGAAGCAAGCATCTCGAGAGTCTCTTTGTCGACCT
FY439379       <-- GTCACCCATTCCAAGGGAAGCAAGCATCTCGAGAGTCTCTTTGTCGACCT
EV537169       <-- GTCACCCATTCCAAGGGAAGCAAGCATCTCGAGAGTCTCTTTGTCGACCT
FD962944       <-- GTCACCCATTCCAAGGGAAGCAAGCATCTCGAGAGTCTCTTTGTCGACCT
FY431427       <-- GTCACCCATTCCAAGGGAAGCAAGCATCTCGAGAGTCTCTTTGTCGACCT
FD578176       <-- GTCACCCATTCCAAGGGAGGCAAGCATCTCGAGAGTCTCTTTGTCGACCT
EW725140       <-- GTCACCCATTCCAAGGGAAGCAAGCATCTCGAGAGTCTCTTTGTCGACCT
FD559633       <-- GTCACCCATTCCAAGGGAGGCAAGCATCTCGAGAGTCTCTTTGTCGACCT
FD989058       <-- GTCACCCATTCCAAGGGAAGCAAGCATATCGAGAGTCTCTTTGTCGACCT
EX905460       <-- GTCACCCATTCCAAGGGAGGCAAGCATCTCGAGAGTCTCTTTGTCGACCT
FD559907       <-- GTCACCCATTCCAAGGGAAGCAAGCATATCGAGAGTCTCTc.........
EY948169       <-- GTCACCCATTCCAAGGGAGGCAAGCATCTCGAGAGTCTCTTTGTCGACCT
EV537899       <-- GTCACCCATTCCAAGGGAAGCAAGCATCTCGAGAGTCTCTTTGTCGACCT
EX756167       <-- GTCACCCATTCCAAGGGAAGCAAGCATCTCGAGAGTCTCTTTGTCGACCT
FD962423       <-- ..................................................
FD566633       --> GTCACCCATTCCAAGGGAAGCAAGCATCTAGAGAGTCTCTTTGTCGACCT
FD583305       --> GTCACCCATTCCAAGGGAAGCAAGCATCTCGAGAGTCTCTTTGTCGACCT
FD953071       --> GTCACCCATTCCAAGGGAAGCAAGCATCTCGAGAGTCTCTTTGTCGACCT
EV542039       --> GTCACCCATTCCAAGGGAAGCAAGCATCTCGAGAGTCTCTTTGTCGACCT
FD943825       --> GTCACCCATTCCAAGGGAGGCAAGCATCTCGAGAGTCTCTTTGTCGACCT
EX906844       --> GTCACCCATTCCAAGGGAAGCAAGCATCTCGAGAGTCTCTTTGTCGACCT
EX758785       --> GTCACCCATTCCAAGGGAAGCAAGCATCTCGAGAGTCTCTTTGTCGACCT
FD545624       --> GTCACCCATTCCAAGGGAAGCAAGCATCTCGAGAGTCTCTTTGTCGACCT
EY943921       --> GTCACCCATTCCAAGGGAGGCAAGCATCTCGAGAGTCTCTTTGTCGACCT
FD968771       --> GTCACCCATTCCAAGGGAAGCAAGCATCTCGAGAGTCTCTTTGTCGACCT
EV541464       --> GTCACCCATTCCAAGGGAAGCAAGCATCTCGAGAGTCTCTTTGTCGACCT
FD959387       --> GTCACCCATTCCAAGGGAAGCAAGCATCTCGAGAGTCTCTTTGTCGACCT
FD984887       --> GTCACCCATTCCAAGGGAAGCAAGCATATCGAGAGTCTCTTTGTCGACCT
EX760035       --> GTCACCCATTCCAAGGGAAGCAAGCATCTCGAGAGTCTCTTTGTCGACCT

               351    -    401
UN16877        --> TGATCACATCGGTCCTGATAGCAGACTCGTCGGGGACAAAGTCCATGCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD562819       <-- TGATCACATCGGTCCTGATAGCAGACTCGTCGGGGACAAAGTCCATGCGG
FD579295       <-- TGATCACATCGGTCCTGATAGCAGACTCGTCGGGGACAAAGTCCATGCGG
FD957356       <-- TGATCACATCGGTCCTGATAGCAGACTCGTCGGGGACAAAGTCCATGCGG
FD970495       <-- TGATCAAATCGGTCCTGATAGCAGACTCGTCGGGGACAAAGTCCATGCGG
FD947976       <-- TGATCACATCGGTCCTGATAGCAGACTCGTCGGGGACAAAGTCCATGCGG
EX902616       <-- TGATCACATCGGTCCTGATAGCAGACTCGTCGGGGACAAAGTCCATGCGG
EX754468       <-- TGATCAAATCGGTCCTGATAGCAGACTCGTCGGGGACAAAGTCCATGCGG
FD549575       <-- TGATCACATCGGTCCTGATAGCAGACTCGTCGGGGACAAAGTCCATGCGG
FD972994       <-- TGATCACATCGGTCTTGATAGCAGACTCGTCGGGGACAAAGTCCATGCGG
FY439379       <-- TGATCACATCGGTCCTGATAGCAGACTCGTCGGGGACAAAGTCCATGCGG
EV537169       <-- TGATCAAATCGGCCCTGATAGCAGACTCGTCGGGGACAAAGTCCATGCGG
FD962944       <-- TGATCACATCGGTCCTGATAGCAGACTCGTCGGGGACAAAGTCCATGCGG
FY431427       <-- TGATCACATCGGTCCTGATAGCAGACTCGTCGGGGACAAAGTCCATGCGG
FD578176       <-- TGATCACATCGGTCCTGATAGCAGACTCGTCGGGGACAAAGTCCATGCGG
EW725140       <-- TGATCACATCGGTCCTGATAGCAGACTCGTCGGGGACAAAGTCCATGCGG
FD559633       <-- TGATCACATCGGTCCTGATAGCAGACTCGTCGGGGACAAAGTCCATGCGG
FD989058       <-- TGATCACATCAGTCCTGATAGCAGACTCGTCGGGGACAAAGTCCATGCGG
EX905460       <-- TGATCACATCGGTCCTGATAGCAGACTCGTCGGGGACAAAGTCCATGCGG
FD559907       <-- ..................................................
EY948169       <-- TGATCACATCGGTCCTGATAGCAGACTCGTCGGGGACAAAGTCCATGCGG
EV537899       <-- TGATCAAATCGGTCCTGATAGCAGACTCGTCGGGGACAAAGTCCATGCGG
EX756167       <-- TGATCAAATCGGTCCTGATAGCAGACTCGTCGGGGACAAAGTCCATGCGG
FD962423       <-- .....ACATCGGTCCTGATA-CAGACTCGTCGGGGACAAAGTCCATGCGG
FD566633       --> TGATCACATCGGTCCTGATAGCAGACTCGTCGGGGACAAAGTCCATGCGG
FD583305       --> TGATCACATCGGTCCTGATAGCAAACTCGTCGGGGACAAAGTCCATGCGG
FD953071       --> TGATCACATCGGTCCTGATAGCAAACTCGTCGGGGACAAAGTCCATGCGG
EV542039       --> TGATCAAATCGGTCCTGATAGCAGACTCGTCGGGGACAAAGTCCATGCGG
FD943825       --> TGATCACATCGGTCCTGATAGCAGACTCGTCGGGGACAAAGTCCATGCGG
EX906844       --> TGATCACATCGGTCCTGATAGCAAACTCGTCGGGGACAAAGTCCATGCGG
EX758785       --> TGATCAAATCGGTCCTGATAGCAAACTCGTCGGGGACAAAGTCCATGCGG
FD545624       --> TGATCACATCGGTCCTGATAGCAGACTCGTCGGGGACAAAGTCCATGCGG
EY943921       --> TGATCACATCGGTCCTGATAGCAGACTCGTCGGGGACAAAGTCCATGCGG
FD968771       --> TGATCACATCGGTCTTGATAGCAGACTCGTCGGGGACAAAGTCCATGCGG
EV541464       --> TGATCAAATCGGCCCTGATAGCAGACTCGTCGGGGACAAAGTCCATGCGG
FD959387       --> TGATCACATCGGTCCTGATAGCAGACTCGTCGGGGACAAAGTCCATGCGG
FD984887       --> TGATCACATCAGTCCTGATAGCAGACTCGTCGGGGACAAAGTCCATGCGG
EX760035       --> TGATCAAATCGGTCCTGATAGCAGACTCGTCGGGGACAAAGTCCATGCGG

               401    -    451
UN16877        --> CGCTCACGCTCTTCCTCTTGGAGCTTGAGTGAGATGCCACGCACTGGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD562819       <-- CGCTCACGCTCTTCCTCTTGGAGCTTGAGTGAGATGCCACGCACTGGTCC  Raphanus sativus var. oleiformis
FD579295       <-- CGCTCACGCTCTTCCTCTTGGAGCTTGAGTGAGATGCCACGCACCGGTCC  Raphanus sativus cv Rat-Tail Radish #3870
FD957356       <-- CGCTCACGCTCTTCCTCTTGGAGCTTGAGTGAGATGCCACGCACCGGTCC  Raphanus sativus cv Rat-Tail Radish #3870
FD970495       <-- CGCTAACGCTCTTCCTCTTGGAGCTTGAGTGAGATGCCACGCACTGGTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD947976       <-- CGCTCACGCTCCTCCTCTTGGAGCTTGAGTGAGATGCCACGCACCGGTCC  Raphanus sativus cv Early Scarlet Globe
EX902616       <-- CGCTCACGCTCTTCCTCTTGGAGCTTGAGTGAGATGCCACGCACCGGTCC  Raphanus sativus cv Rat-Tail Radish #3870
EX754468       <-- CGCTCACGCTCTTCCTCTTGGAGCTTGAGTGAGATGCCACGCACTGGTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549575       <-- CGCTCACGCTCTTCCTCTTGGAGCTTGAGTGAGATGCCACGCACCGGTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD972994       <-- CGCTCACGCTCTTCCTCTTGGAGCTTGAGCGAGATGCCACGCACTGGTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FY439379       <-- CGCTCACGCTCTTCCTCTTGGAGCTTGAGTGAGATGCCACGCACTGGTCC  Raphanus sativus cv GSK3-1
EV537169       <-- CGCTCACGCTCTTCCTCTTGGAGCTTGAGTGAGATGCCACGCACTGGTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962944       <-- CGCTCACGCTCTTCCTCTTGGAGCTTGAGGGAGATGCCACGCACTGGTCC  Raphanus raphanistrum subsp. maritimus
FY431427       <-- CGCTCACGCTCTTCCTCTTGGAGCTTGAGTGAGATGCCACGCACTGGTCC  Raphanus sativus cv GSK3-1
FD578176       <-- CGCTCACGCTCCTCCTCTTGGAGCTTGAGTGAGATGCCACGCACCGGTCC  Raphanus sativus cv Rat-Tail Radish #3870
EW725140       <-- CGCTCACGCTCTTCCTCTTGGAGCTTGAGTGAGATGCCACGCACTGGTCC  Raphanus sativus cv Early Scarlet Globe
FD559633       <-- CGCTCACGCTCTTCCTCTTGGAGCTTGAGTGAGATGCCACGCACCGGTCC  Raphanus raphanistrum subsp. landra
FD989058       <-- CGCTCACGCTCTTCCTCTTGGAGCTTGAGCGAGATGCCACGCACCGGTCC  Raphanus raphanistrum subsp. landra
EX905460       <-- CGCTCACGCTCCTCCTCTTGGAGCTTGAGTGAGATGCCACGCACCGGTCC  Raphanus sativus cv Rat-Tail Radish #3870
FD559907       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY948169       <-- CGCTCACGCTCCTCCTCTTGGAGCTTGAGTGAGATGCCACGCACCGGTCC  Raphanus sativus cv Rat-Tail Radish #3870
EV537899       <-- TGCTCACGCTCTTCCTCTTGGAGCTTGAGTGAGATGCCACGCACTGGTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX756167       <-- CGCTCACGCTCTTCCTCTTGGAGCTTGAGTGAGATGCCACGCACTGGTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962423       <-- CGCTCACGCTCTTCCTCTTGGAGCTTGAGGGAGATGCCACGCACTGGTCC  Raphanus raphanistrum subsp. maritimus
FD566633       --> CGCTCACGCTCTTCCTCTTGGAGCTTGAGTGAGATGCCACGCACTGGTCC  Raphanus sativus var. oleiformis
FD583305       --> CGCTCACGCTCTTCCTCTTGGAGCTTGAGTGAAATGCCACGCACCGGTCC  Raphanus sativus cv Rat-Tail Radish #3870
FD953071       --> CGCTCACGCTCTTCCTCTTGGAGCTTGAGTGAGATGCCACGCACCGGTCC  Raphanus sativus cv Rat-Tail Radish #3870
EV542039       --> TGCTCACGCTCTTCCTCTTGGAGCTTGAGTGAGATGCCACGCACTGGTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD943825       --> CGCTCACGCTCCTCCTCTTGGAGCTTGAGTGAGATGCCACGCACCGGTCC  Raphanus sativus cv Early Scarlet Globe
EX906844       --> CGCTCACGCTCTTCCTCTTGGAGCTTGAGTGAGATGCCACGCACCGGTCC  Raphanus sativus cv Rat-Tail Radish #3870
EX758785       --> CGCTCACGCTCTTCCTCTTGGAGCTTGAGTGAGATGCCACGCACTGGTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545624       --> CGCTCACGCTCTTCCTCTTGGAGCTTGAGTGAGATGCCACGCACCGGTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY943921       --> CGCTCACGCTCCTCCTCTTGGAGCTTGAGTGAGATGCCACGCACCGGTCC  Raphanus sativus cv Rat-Tail Radish #3870
FD968771       --> CGCTCACGCTCTTCCTCTTGGAGCTTGAGCGAGATGCCACGCACTGGTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541464       --> CGCTCACGCTCTTCCTCTTGGAGCTTGAGTGAGATGCCACGCACTGGTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD959387       --> CGCTCACGCTCTTCCTCTTGGAGCTTGAGGGAGATGCCACGCACTGGTCC  Raphanus raphanistrum subsp. maritimus
FD984887       --> CGCTCACGCTCTTCCTCTTGGAGCTTGAGCGAGATGCCACGCACCGGTCC  Raphanus raphanistrum subsp. landra
EX760035       --> CGCTCACGCTCTTCCTCTTGGAGCTTGAGTGAGATGCCACGCACTGGTCC  Raphanus raphanistrum subsp. raphanistrum (MS)

               451    -    501
UN16877        --> -CTTCTGGATCCTCTTCATGAGATGGGTGGAGAATCCGGCGATCTTGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD562819       <-- -CTTCTGGATCCTCTTCATGAGATGGGTGGAGAATCCGGCGATCTTATTG
FD579295       <-- -CTTCTGGATCCTCTTCATGAGATGGGTGGAGAATCCGGCGATCTTGTTG
FD957356       <-- -CTTCTGGATCCTCTTCATGAGATGGGTGGAGAATCCGGCGATCTTGTTG
FD970495       <-- -CTTCTGGATCCTCTTCATGAGATGGGTGGAGAATCCGGCGATCTTGTTG
FD947976       <-- -CTTCTGGATCCTCTTCATGAGATGGGTGGAGAACCCGGCGATCTTGTTG
EX902616       <-- -CTTCTGGATCCTCTTCATGAGATGGGTGGAGAATCCGGCGATCTTGTTG
EX754468       <-- -CTTCTGGATCCTCTTCATGAGATGGGTGGAGAATCCGGCGATCTTGTTG
FD549575       <-- -CTTCTGGATCCTCTTCATGAGATGGGTGGAGAATCCGGCGATCTTGTTG
FD972994       <-- -CTTCTGGATCCTCTTCATGAGATGGGTGGAGAATCCGGCGATCTTGTTG
FY439379       <-- -CTTCTGGATCCTCTTCATGAGATGGGTGGAGAATCCGGCGATCTTATTG
EV537169       <-- -CTTCTGGATCCTCTTCATGAGATGGGTGGAGAATCCGGCGATCTTGTTG
FD962944       <-- TCTTCTGGATCCTCTTCATGAGATGGGTGGAGAATCCGGCGATCTTGTTG
FY431427       <-- -CTTCTGGATCCTCTTCATGAGATGGGTGGAGAATCCGGCGATCTTATTG
FD578176       <-- -CTTCTGGATCCTCTTCATGAGATGGGTGGAGAACCCGGCGATCTTGTTG
EW725140       <-- -CTTCTGGATCCTCTTCATGAGATGGGTGGAGAATCCGGCGATCTTATTG
FD559633       <-- -CTTCTGGATCCTCTTCATGAGATGGGTGGAGAATCCGGCGATCTTGTTG
FD989058       <-- -CTTCTGGATCCTCTTCATGAGATGGGTGGAGAACCCGGCGATCTTGTTG
EX905460       <-- -CTTCTGGATCCTCTTCATGAGATGGGTGGAGAACCCGGCGATCTTGTTG
FD559907       <-- ..................................................
EY948169       <-- -CTTATGGATCCTCTTCATGAGATGGGTGGAGAACCCGGCGATCTTGTTG
EV537899       <-- -CTTCTGGATCCTCTTCATGAGATGGGTGGAGAATCCGGCGATCTTGTTG
EX756167       <-- -CTTCTGGATCCTCTTCATGAGATGGGTGGAGAATCCGGCGATCTTGTTG
FD962423       <-- -CTTCTGGATCCTCTTCATGAGATGGGTGGAGAATCCGGCGATCTTGTTG
FD566633       --> -CTTCTGGATCCTCTTCATGAGATGGGTGGAGAATCCGGCGATCTTATTG
FD583305       --> -CTTCTGGATCCTCTTCATGAGATGGGTGGAGAATCCGGCGATCTTGTTG
FD953071       --> -CTTCTGGATCCTCTTCATGAGATGGGTGGAGAATCCGGCGATCTTGTTG
EV542039       --> -CTTCTGGATCCTCTTCATGAGATGGGTGGAGAATCCGGCGATCTTGTTG
FD943825       --> -CTTCTGGATCCTCTTCATGAGATGGGTGGAGAACCCGGCGATCTTGTTG
EX906844       --> -CTTCTGGATCCTCTTCATGAGATGGGTGGAGAATCCGGCGATCTTGTTG
EX758785       --> -CTTCTGGATCCTCTTCATGAGATGGGTGGAGAATCCGGCGATCTTGTTG
FD545624       --> -CTTCTGGATCCTCTTCATGAGATGGGTGGAGAATCCGGCGATCTTGTTG
EY943921       --> -CTTATGGATCCTCTTCATGAGATGGGTGGAGAACCCGGCGATCTTGTTG
FD968771       --> -CTTCTGGATCCTCTTCATGAGATGGGTGGAGAATCCGGCGATCTTGTTG
EV541464       --> -CTTCTGGATCCTCTTCATGAGATGGGTGGAGAATCCGGCGATCTTGTTG
FD959387       --> -CTTCTGGATCCTCTTCATGAGATGGGTGGAGAATCCGGCGATCTTGTTG
FD984887       --> -CTTCTGGATCCTCTTCATGAGATGGGTGGAGAACCCGGCGATCTTGTTG
EX760035       --> -CTTCTGGAACCTCTTCATGAGATGGGTGGAGAATCCGGCGATCTTGTTG

               501    -    551
UN16877        --> CGGAGACGCTTCGAAGGGATGATTGCGACTTCTTCGAGGATCTTCTTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD562819       <-- CGGAGACGCTTCGAAGGGATGATTGCGACTTCTTCGAGGATCTTCTTGTT  Raphanus sativus var. oleiformis
FD579295       <-- CGGAGACGCTTCGAAGGGATGATTGCCACTTCTTCGAGGATCTTCTTGTT  Raphanus sativus cv Rat-Tail Radish #3870
FD957356       <-- CGGAGACGCTTCGAAGGGATGATTGCCACTTCTTCGAGGATCTTCTTGTT  Raphanus sativus cv Rat-Tail Radish #3870
FD970495       <-- CGGAGACGCTTCAAAGGGATGATTGCGACTTCTTCGAGGATCTTCTTGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD947976       <-- CGGAGACGCTTCGAAGGGATGATTGCCACTTCTTCAAGGATCTTCTTGTT  Raphanus sativus cv Early Scarlet Globe
EX902616       <-- CGGAGACGCTTCGAAGGGATGATTGCCACTTCTTCGAGGATCTTCTTGTT  Raphanus sativus cv Rat-Tail Radish #3870
EX754468       <-- CGGAGACGCTTCGAAGGGATGATTGCGACTTCTTCGAGGATCTTCTTGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549575       <-- CGGAGACGCTTCGAAGGGATGATTGCGACTTCTTCGAGGATCTTCTTGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD972994       <-- CGAAGACGCTTCGAAGGGATGATTGCGACTTCTTCGAGGATCTTCTTGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY439379       <-- CGGAGACGCTTCGAAGGGATGATTGCGACTTCTTCGAGGATCTTCTTGTT  Raphanus sativus cv GSK3-1
EV537169       <-- CGGAGACGCTTCGAAGGGATGATTGCGACTTCTTCGAGGATCTTCTTGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962944       <-- CGGAGACGCTTCGAAGGGATGATTGCCACTTCCTCGAGGATCTTCTTGTT  Raphanus raphanistrum subsp. maritimus
FY431427       <-- CGGAGACGCTTCGAAGGGATGATTGCGACTTCTTCGAGGATCTTCTTGTT  Raphanus sativus cv GSK3-1
FD578176       <-- CGGAGACGCTTCGAGGGGATGATTGCCACTTCTTCGAGGATCTTCTTGTT  Raphanus sativus cv Rat-Tail Radish #3870
EW725140       <-- CGGAGACGCTTCGAAGGGATGATTGCGACTTCTTCGAGGATCTTCTTGTT  Raphanus sativus cv Early Scarlet Globe
FD559633       <-- CGGAGACGCTTCGAAGGGATGATTGCTACTTCTTCGAGGATCTTCTTGTT  Raphanus raphanistrum subsp. landra
FD989058       <-- CGGAGACGCTTCGAAGGGATGATTGCCACTTCTTCGAGGATCTTCTTGTT  Raphanus raphanistrum subsp. landra
EX905460       <-- CGGAGACGCTTCGAAGGGATGATTGCCACTTCTTCGAGGATCTTCTTGTT  Raphanus sativus cv Rat-Tail Radish #3870
FD559907       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY948169       <-- CGGAGACGCTTTGAAGGGATGATTGCCACTTCTTCGAGGATCTTCTTGTT  Raphanus sativus cv Rat-Tail Radish #3870
EV537899       <-- CGGAGACGCTTCGAAGGGATGATTGCGACTTCTTCGAGGATCTTCTTGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX756167       <-- CGGAGACGCTTCGAAGGGATGATTGCGACTTCTTCGAGGATCTTCTTGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962423       <-- CGGAGACGCTTCGAAGGGATGATTGCCACTTCCTCGAGGATCTTCTTGTT  Raphanus raphanistrum subsp. maritimus
FD566633       --> CGGAGACGCTTCGAAGGGATGATTGCGACTTCTTCGAGGATCTTCTTGTT  Raphanus sativus var. oleiformis
FD583305       --> CGGAGACGCTTCGAAGGGATGATTGCCACTTCTTCGAGGATCTTCTTGTT  Raphanus sativus cv Rat-Tail Radish #3870
FD953071       --> CGGAAACGCTTCGAAGGGATGATTGCCACTTCTTCGAGGATCTTCTTGTT  Raphanus sativus cv Rat-Tail Radish #3870
EV542039       --> CGGAGACGCTTCGAAGGGATGATTGCGACTTCTTCGAGGATCTTCTTGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD943825       --> CGGAGACGCTTCGAAGGGATGATTGCCACTTCTTCAAGGATCTTCTTGTT  Raphanus sativus cv Early Scarlet Globe
EX906844       --> CGGAGACGCTTCGAAGGGATGATTGCCACTTCTTCGAGGATCTTCTTGTT  Raphanus sativus cv Rat-Tail Radish #3870
EX758785       --> CGGAGACGCTTCGAAGGGATGATTGCGACTTCTTCGAGGATCTTCTTGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545624       --> CGGAAACGCTTCGAAGGGATGATTGCGACTTCTTCGAGGATCTTCTTGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY943921       --> CGGAGACGCTTTGAAGGGATGATTGCCACTTCTTCGAGGATCTTCTTGTT  Raphanus sativus cv Rat-Tail Radish #3870
FD968771       --> CGAAGACGCTTCGAAGGGATGATTGCGACTTCTTCGAGGATCTTCTTGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541464       --> CGGAGACGCTTCGAAGGGATGATTGCGACTTCTTCGAGGATCTTCTTGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD959387       --> CGGAAACGCTTCGAAGGGATGATTGCCACTTCCTCGAGGATCTTCTTGTT  Raphanus raphanistrum subsp. maritimus
FD984887       --> CGGAGACGCTTCGAAGGGATGATTGCCACTTCTTCGAGGATCTTCTTGTT  Raphanus raphanistrum subsp. landra
EX760035       --> CGGAGACGCTTCGAAGGGATGATTGCGACTTCTTCGAGGATCTTCTTGTT  Raphanus raphanistrum subsp. raphanistrum (MS)

               551    -    601
UN16877        --> GGTGTGGAAGTCGAGTGTCATGCGAGAGTAGTATTTCTCGATCACCTGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD562819       <-- GGTGTGGAAGTCGAGTGTCATGCGAGAGTAGTATTTCTCGATCACCTGAC  Raphanus sativus var. oleiformis
FD579295       <-- GGTGTGGAAGTCCAGTGTCATGCGAGAGTAGTATTTCTCGATCACCTGAC  Raphanus sativus cv Rat-Tail Radish #3870
FD957356       <-- GGTGTGGAAGTCCAGCGTCATGCGAGAGTAGTATTTCTCGATCACTTGAC  Raphanus sativus cv Rat-Tail Radish #3870
FD970495       <-- GGTGTGGAAGTCGAGTGTCATGCGAGAGTAGTATTTCTCGATCACCTGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD947976       <-- GATGTGGAAGTCCAGTGTCATGCGAGAGTAGTATTTCTCGATCACCTGAC  Raphanus sativus cv Early Scarlet Globe
EX902616       <-- GGTGTGGAAGTCCAGCGTCATGCGAGAGTAGTATTTCTCGATCACCTGAC  Raphanus sativus cv Rat-Tail Radish #3870
EX754468       <-- GGTGTGGAAGTCGAGTGTCATGCGAGAGTAGTATTTCTCGATCACCTGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549575       <-- GGTGTGGAAGTCGAGTGTCATGCGAGAGTAGTATTTCTCGATCACCTGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD972994       <-- GGTGTGGAAGTCCAGCGTCATGCGAGAGTAGTATTTCTCGATCACCTGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FY439379       <-- GGTGTGGAAGTCGAGTGTCATGCGAGAGTAGTATTTCTCGATCACCTGAC  Raphanus sativus cv GSK3-1
EV537169       <-- GGTGTGGAAGTCGAGTGTCATGCGAGAGTAGTATTTCTCGATCACCTGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962944       <-- GGTGTGGAAGTCCAGTGTCATGCGAGAGTAGTATTTCTCGATCACCTGAC  Raphanus raphanistrum subsp. maritimus
FY431427       <-- GGTGTGGAAGTCGAGTGTCATGCGAGAGTAGTATTTCTCGATCACCTGAC  Raphanus sativus cv GSK3-1
FD578176       <-- GGTGTGGAAGTCCAGTGTCATGCGAGAGTAGTATTTCTCGATCACCTGAC  Raphanus sativus cv Rat-Tail Radish #3870
EW725140       <-- GGTGTGGAAGTCGAGTGTCATGCGAGAGTAGTATTTCTCGATCACCTGAC  Raphanus sativus cv Early Scarlet Globe
FD559633       <-- CGTGTGGAAGTCGAGCGTCATGCGAGAGTAGTATTTCTCGATCACCTGGC  Raphanus raphanistrum subsp. landra
FD989058       <-- GGTGTGGAAGTCTAGTGTCATGCGAGAGTAGTATTTCTCGATCACCTGAC  Raphanus raphanistrum subsp. landra
EX905460       <-- GGTGTGGAAGTCCAGTGTCATGCGAGAGTAGTATTTCTCGATCACCTGAC  Raphanus sativus cv Rat-Tail Radish #3870
FD559907       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY948169       <-- GGTGTGGAAGTCCAGTGTCATGCGAGAGTAGTATTTCTCGATCACCTGAC  Raphanus sativus cv Rat-Tail Radish #3870
EV537899       <-- GGTGTGGAAGTCGAGTGTCATGCGAGAGTAGTATTTCTCGATCACC....  Raphanus raphanistrum subsp. raphanistrum (MS)
EX756167       <-- GGTGTGGAAGTCGAGTGTCATGCGAGAGTAGTATTTCTCGATCACCTGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962423       <-- GGTGTGGAAGTCCAGTGTCATGCGAGAGTAGTATTTCTCGATCACCTGAC  Raphanus raphanistrum subsp. maritimus
FD566633       --> GGTGTGGAAGTCGAGTGTCATGCGAGAGTAGTATTTCTCGATCACCTGAC  Raphanus sativus var. oleiformis
FD583305       --> GGTGTGGAAGTCCAGTGTCATGCGAGAGTAGTATTTCTCGATCACCTGAC  Raphanus sativus cv Rat-Tail Radish #3870
FD953071       --> GGTGTGGAAGTCCAGCGTCATGCGAGAGTAGTATTTCTCGATCACTTGAC  Raphanus sativus cv Rat-Tail Radish #3870
EV542039       --> GGTGTGGAAGTCGAGTGTCATGCGAGAGTAGTATTTCTCGATCACCTGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD943825       --> GATGTGGAAGTCCAGTGTCATGCGAGAGTAGTATTTCTCGATCACCTGAC  Raphanus sativus cv Early Scarlet Globe
EX906844       --> GGTGTGGAAGTCCAGCGTCATGCGAGAGTAGTATTTCTCGATCACCTGAC  Raphanus sativus cv Rat-Tail Radish #3870
EX758785       --> GGTGTGGAAGTCGAGTGTCATGCGAGAGTAGTATTTCTCGATCACCTGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545624       --> GGTGTGGAAGTCGAGTGTCATGCGAGAGTAGTATTTCTCGATCACCTGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY943921       --> GGTGTGGAAGTCCAGTGTCATGCGAGAGTAGTATTTCTCGATCACCTGAC  Raphanus sativus cv Rat-Tail Radish #3870
FD968771       --> GGTGTGGAAGTCCAGCGTCATGCGAGAGTAGTATTTCTCGATCACCTGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541464       --> GGTGTGGAAGTCGAGTGTCATGCGAGAGTAGTATTTCTCGATCACCTGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD959387       --> GGTGTGGAAGTtcagt..................................  Raphanus raphanistrum subsp. maritimus
FD984887       --> GGTGTGGAAGTCTAGTGTCATGCGAGAGTAGTATTTCTCGATCACCTGAC  Raphanus raphanistrum subsp. landra
EX760035       --> GGTGTGGAAGTCGAGTGTCATGCGAGAGTAGTATTTCTCGATCACCTGAC  Raphanus raphanistrum subsp. raphanistrum (MS)

               601    -    651
UN16877        --> GAGATGATTTCTTCACCGTCTTGGTTCGGACACGCCCCATCTTTTCAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD562819       <-- GAGATGATTTCTTCACCGTCTTGGTTCGGACACGCCCCATCTTTTCGGTT  Raphanus sativus var. oleiformis
FD579295       <-- GAGATGATTTCTTCACCGTCTTGGTTCGGACACGCCCCATCTTTTCAGTT  Raphanus sativus cv Rat-Tail Radish #3870
FD957356       <-- GAGATGATTTCTTCACCGTCTTGGTTCGGACACGCCCCATCTTTTCAGTT  Raphanus sativus cv Rat-Tail Radish #3870
FD970495       <-- GAGATGATTTCTTCACCGTCTTGGTTCGGACACGCCCCATCTTTTCAGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD947976       <-- GAGATGATTTCTTCACCGTCTTGGTTCGGACACGCCCCATCTTTTCAGTT  Raphanus sativus cv Early Scarlet Globe
EX902616       <-- GAGATGATTTCTTCACCGTCTTGGTTCGGACACGCCCCATCTTTTCAGTT  Raphanus sativus cv Rat-Tail Radish #3870
EX754468       <-- GAGATGATTTCTTCACCGTCTTGGTTCGGACACGCCCCATCTTTTCAGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549575       <-- GAGATGATTTCTTCACCGTCTTGGTTCGGACACGCCCCATCTTTTCAGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD972994       <-- GAGATGATTTCTTCACCGTCTTGGTTCGGACACGCCCCATCTTCTCAGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY439379       <-- GAGATGATTTCTTCACCGTCTTGGTTCGGACACGCCCCATCTTTTCGGTT  Raphanus sativus cv GSK3-1
EV537169       <-- GAGATGATTTCTTCACCGTCTTGGTTCGGACACGCCCCATCTTTTCAGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962944       <-- GAGATGATTTCTTCACCGTCTTGGTTCGGACACGCCCCATCTTTTCGGTT  Raphanus raphanistrum subsp. maritimus
FY431427       <-- GAGATGATTTCTTCACCGTCTTGGTTCGGACACGCCCCATCTTTTCGGTT  Raphanus sativus cv GSK3-1
FD578176       <-- GAGATGATTTCTTCACCGTCTTGGTTCGGACACGCCCCATCTTTTCAGTT  Raphanus sativus cv Rat-Tail Radish #3870
EW725140       <-- GAGATGATTTCTTCACCGTCTTGGTTCGGACACGCCCCATCTTTTCGGTT  Raphanus sativus cv Early Scarlet Globe
FD559633       <-- GAGATGATTTCTTCACCGTCTTGGTTCGGACACGCCCCATCTTTTCGGTT  Raphanus raphanistrum subsp. landra
FD989058       <-- GAGATGATTTCTTCACCGTCTTGGTTCGGACACGCCCCATCTTTTCAGTT  Raphanus raphanistrum subsp. landra
EX905460       <-- GAGATGATTTCTTCACCGTCTTGGTTCGGACACGCCCCATCTTTTCAGTT  Raphanus sativus cv Rat-Tail Radish #3870
FD559907       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY948169       <-- GAGATGATTTCTTCACCGTCTTGGTTCGGACACGCCCCATCTTTTCAGTT  Raphanus sativus cv Rat-Tail Radish #3870
EV537899       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX756167       <-- GAGATGATTTCTTCACCGTCTTGGTTCGGACACGCCCCATCTTTTCAGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962423       <-- GAGATGATTTCTTCACCGTCTTGGTTCGGACACGCCCCATCTTTTCGGTT  Raphanus raphanistrum subsp. maritimus
FD566633       --> GAGATGATTTCTTCACCGTCTTGGTTCGGACACGCCCCATCTTTTCGGTT  Raphanus sativus var. oleiformis
FD583305       --> GAGATGATTTCTTCACCGTCTTGGTTCGGACACGCCCCATCTTTTCAGTT  Raphanus sativus cv Rat-Tail Radish #3870
FD953071       --> GAGATGATTTCTTCACCGTCTTGGTTCGGACACGCCCCATCTTTTCAGTT  Raphanus sativus cv Rat-Tail Radish #3870
EV542039       --> GAGATGATTTCTTCACCGTCTTGGTTCGGACACGCCCCATCTTTTCAGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD943825       --> GAGATGATTTCTTCACCGTCTTGGTTCGGACACGCCCCATCTTTTCAGTT  Raphanus sativus cv Early Scarlet Globe
EX906844       --> GAGATGATTTCTTCACCGTCTTGGTTCGGACACGCCCCATCTTTTCAGTT  Raphanus sativus cv Rat-Tail Radish #3870
EX758785       --> GAGATGATTTCTTCACCGTCTTGGTTCGGACACGCCCCATCTTTTCAGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545624       --> GAGATGATTTCTTCACCGTCTTGGTTCGGACACGCCCCATCTTTTCAGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY943921       --> GAGATGATTTCTTCACCGTCTTGGTTCGGACACGCCCCATCTTTTCAGTT  Raphanus sativus cv Rat-Tail Radish #3870
FD968771       --> GAGATGATTTCTTCACCGTCTTGGTTCGGACACGCCCCATCTTCTCAGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541464       --> GAGATGATTTCTTCACCGTCTTGGTTCGGACACGCCCCATCTTTTCAGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD959387       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD984887       --> GAGATGATTTCTTCACCGTCTTGGTTCGGACACGCCCCATCTTTTCAGTT  Raphanus raphanistrum subsp. landra
EX760035       --> GAGATGATTTCTTCACCGTCTTGGTTCGGACACGCCCCATCTTTTCAGTT  Raphanus raphanistrum subsp. raphanistrum (MS)

               651    -    701
UN16877        --> TACCTGTGACTT-GCTTACTTACCTGC---GAGGAAGATGATG---CGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD562819       <-- TGCCTGTGACTT-GCTTACTTACCTGC---GAGGAAGATGATG---CGGC  Raphanus sativus var. oleiformis
FD579295       <-- TACCTGTGACTT-GCTTACTTACCTGC---GAGGAAGATGATG---CGGC  Raphanus sativus cv Rat-Tail Radish #3870
FD957356       <-- TACCTGTGACTT-GCTTACTTACCTGC---GAGGAAGATGATG---CGGC  Raphanus sativus cv Rat-Tail Radish #3870
FD970495       <-- TACCTGTGACTTAGCTTACTTACCTGC---GAGGAAGATGATG---CGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD947976       <-- TACCTGTGACTT-GCTTACTTACCTGC---GAGGAAGATGATG---CGGC  Raphanus sativus cv Early Scarlet Globe
EX902616       <-- TACCTGTGACTT-GCTTACTTACCTGC---GAGGAAGATGCTG---CGGC  Raphanus sativus cv Rat-Tail Radish #3870
EX754468       <-- TACC..............................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549575       <-- TACCTGTGACTT-ACTTACTTACCTGC---GAGGAAGATGATGATGCGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD972994       <-- TACCTGTGACTT-GCTTACTTACCTGC---GAGGAAGATGATG---CGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FY439379       <-- TGCCTGTGACTT-GCTTACTTACCTGC---GAGGAAGATGATG---CGGC  Raphanus sativus cv GSK3-1
EV537169       <-- TACCTGTGACTTAGCTTACTTACCTGC---GAGGAAGATGATG---CGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962944       <-- TGCCTGTGACTT-GCTTACTTACCTGC---GAGGAAGATGATGATGCGGC  Raphanus raphanistrum subsp. maritimus
FY431427       <-- TGCCTGTGAC........................................  Raphanus sativus cv GSK3-1
FD578176       <-- TACCTGTGACTT-GCTTACTTACCTGCTGCGAGGAAGATGATG---CGGC  Raphanus sativus cv Rat-Tail Radish #3870
EW725140       <-- TGCCTGTGACTT-GCTTACTTACCTGC---GAGGAAGGTGATG---CGGC  Raphanus sativus cv Early Scarlet Globe
FD559633       <-- TACCTGTGACTT-GCTTACTTACCTGC---GAGGGAGATGATG---CGGC  Raphanus raphanistrum subsp. landra
FD989058       <-- TACCTGTGACTT-GCTTACTTACCTGC---GAGGAAGATGATG---CGGC  Raphanus raphanistrum subsp. landra
EX905460       <-- TACCTGTGACTT-GCTTACTTACCTGC---GAGGAAGATGATG---CGGC  Raphanus sativus cv Rat-Tail Radish #3870
FD559907       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY948169       <-- TACCTGTGACTT-GCTTACTTACCTGC---GAGGAAGATGATG---CGGC  Raphanus sativus cv Rat-Tail Radish #3870
EV537899       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX756167       <-- TACCTGTGACTTAGCTTACTTACCTGC---GAGGAAGATGATG---CGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962423       <-- TGCCTGTGACTT-GCTTACTTACCTGC---GAGGAAGATGATGatgcggc  Raphanus raphanistrum subsp. maritimus
FD566633       --> TGCCTGTGACTT-GCTTACTTACCTGC---GAGGAAGATGATG---CGGC  Raphanus sativus var. oleiformis
FD583305       --> TACCTGTGACTT-GCTTACTTACCTGC---GAGGAAGATGATG---CGGC  Raphanus sativus cv Rat-Tail Radish #3870
FD953071       --> TACCTGTGACTT-GCTTACTTACCTGC---GAGGAAGATGATG---CGGC  Raphanus sativus cv Rat-Tail Radish #3870
EV542039       --> TACCTGTGACTTAGCTTACTTACCTGC---GAGGAAGATGATG---CGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD943825       --> TACCTGTGACTT-GCTTACTTACCTGC---GAGGAAGATGATG---CGGC  Raphanus sativus cv Early Scarlet Globe
EX906844       --> TACCTGTGACTT-GCTTACTTACCTGC---GAGGAAGATGCTG---CGGC  Raphanus sativus cv Rat-Tail Radish #3870
EX758785       --> TACC..............................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545624       --> TACCTGTGACTT-ACTTACTTACCTGC---GAGGAAGATGATGATGCGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY943921       --> TACCTGTGACTT-GCTTACTTACCTGC---GAGGAAGATGATG---CGGC  Raphanus sativus cv Rat-Tail Radish #3870
FD968771       --> TACCTGTGACTT-GCTTACTTACCTGC---GAGGAAGATGATG---CGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541464       --> TACCTGTGACTTAGCTTACTTACCTGC---GAGGAAGATGATG---CGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD959387       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD984887       --> TACCTGTGACTT-GCTTACTTACCTGC---GAGGAAGATGATG---CGGC  Raphanus raphanistrum subsp. landra
EX760035       --> TACCTGTGACTTAGCTTACTTACCTGC---GAGGAAGATGATG---CGGC  Raphanus raphanistrum subsp. raphanistrum (MS)

               701    -    751
UN16877        --> GGTAAACAAATGAAGGAGCAAAGACAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD562819       <-- GGTAAACAAATGAAGGAGCcc........
FD579295       <-- GGTAAACAAATGAAGGAGCAAAGACcc..
FD957356       <-- GGTAAACAAATGAAGGAGCAAAGACGGCC
FD970495       <-- GGTAAACAAATGAAGGAGCAAAGACcc..
FD947976       <-- GGTAAACAAATGAAGGATCAAAGACcc..
EX902616       <-- GGTAAACAAATGAAGGAGCAAAGcc....
EX754468       <-- .............................
FD549575       <-- GGCAAGCAAATGAAGGAGCAAAGACcc..
FD972994       <-- GGTAAACAAATGAAGGAGCAAAGACAGCC
FY439379       <-- .............................
EV537169       <-- GGTAAACAAATGAAGGAGCAAAGACcc..
FD962944       <-- GGCAAGCAAATGAAGGAGCcc........
FY431427       <-- .............................
FD578176       <-- GGTAAACAAATGAAGGATCAAAGACcc..
EW725140       <-- GGTAAACAAATGAAGGAGCAAAGACcc..
FD559633       <-- GGCAAGCAAATGAAGGAGCcc........
FD989058       <-- GGTAAACAAATGAAGGAGCcc........
EX905460       <-- GGTAAACAAATGAAGGAtccc........
FD559907       <-- .............................
EY948169       <-- GGTAAACAAATGAAGGATCAAAGACcc..
EV537899       <-- .............................
EX756167       <-- GGTAAACAAATGAAGGAGCAAAGACcc..
FD962423       <-- ggcaagccc....................
FD566633       --> GGTAAACAAATGAAGGAGCcc........
FD583305       --> GG...........................
FD953071       --> G............................
EV542039       --> GGTcc........................
FD943825       --> GGTAAACAAATGAAGGA............
EX906844       --> GGTAAACAAATGAAGGAGCAAAGcc....
EX758785       --> .............................
FD545624       --> GGCAAGCAAATGAAGGAGCAAAGACcc..
EY943921       --> GGTAAACAAATGAAGGATCAAAGACcc..
FD968771       --> G............................
EV541464       --> GGTAAACAAATGAAGGAGCAAAGACcc..
FD959387       --> .............................
FD984887       --> GGTAAACAAATGAAGGAGCcc........
EX760035       --> GGTAAACAAATGAAGGAGCAAAGACcc..