RadishBase

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Alignment for radish unigene UN16879

               1      -     51
UN16879        --> CCTCTCTTTTTGCCATAATAATCATATCTCTGTCGCAATTTAGCAAAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758795       <-- ..................................................
EV529544       <-- ..................................................
EX768426       <-- ..................................................
EX901071       <-- ..................................................
EY945024       <-- ..................................................
EW736306       <-- ..................................................
EX769113       <-- ..................................................
FD544749       <-- ..................................................
EY936011       <-- ..................................................
FY451298       --> CCTCTCTTTTTGCCATAATAATCATATCTCTGTCACAATTTAGCAAAGTG
FD947663       --> .....................ggATATCTCTGTCGCAATTTAGCAAAGTG
EV524576       --> ..........................................ggAAAGTG
FD541534       --> ............................................ggAGTG
EV551594       --> .............................................ggGTG
EW731912       --> ...............................................ggG
EY949522       --> ...............................................ggG
FD947915       --> ..............................................gggG
EX754480       --> ..................................................
EX764525       --> ..................................................
EY940220       --> ..................................................
FD548580       --> ..................................................

               51     -    101
UN16879        --> AGACACAGAGAGACAGAGAGTATGGCGACCACACTTCATTGTCTCTCCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758795       <-- ..................................................
EV529544       <-- ..................................................
EX768426       <-- ..................................................
EX901071       <-- ..................................................
EY945024       <-- ..................................................
EW736306       <-- ..................................................
EX769113       <-- ..................................................
FD544749       <-- ..................................................
EY936011       <-- ..................................................
FY451298       --> AGACACAGAGAGACAGAGAGTATGGCGACCACACTTCATTGTCTCTCCAC
FD947663       --> AGACACAGAGAGACAGAGAGTATGGCGACCACACTTCATTGTCTCTCCAC
EV524576       --> AGACACAGAGAGACAGAGAGTATGGCGACCACACTTCATTGTCTCTCCAC
FD541534       --> AGACACAGAGA--CAGAGAGTATGGCGACCACACTTCATTGTCTCTCCAC
EV551594       --> AGACACAGAGA--CAGAGAATATGGCGACCACACTTCATTGTCTCTCCAC
EW731912       --> AGACACAGAGAGACAGAGAGTATGGCGACCACACTTCATTGTCTCTCCAC
EY949522       --> AGACACAGAGAGACAGAGAGTATGGCGACCACACTTCATTGTCTCTCCAC
FD947915       --> AGACACAGAGAGACAGAGAGTATTGCGACCACACTTCATTGTCTCTCCAC
EX754480       --> .....................ATGGCGACCACACTTCATTGTCTCTCCAC
EX764525       --> ..................................TTCATTGTCTCTCCAC
EY940220       --> ..................................................
FD548580       --> ..................................................

               101    -    151
UN16879        --> ACTCCATCTTCTTCCTCGAACCCATCGTCCTAAAACTCTTAACTCTCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758795       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV529544       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX768426       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901071       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY945024       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW736306       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX769113       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD544749       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY936011       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FY451298       --> ACTCCATCTTCTTCCTCGAACCCATCGTCCTAAAACTCTTAACTCTCTCA  Raphanus sativus cv GSK3-1
FD947663       --> ACTCCATCTTCTTCCACGAACCAATCGTCCTAAAACTCTTAACTCTCTCA  Raphanus sativus cv Early Scarlet Globe
EV524576       --> ACTCCATCTTCTTCCTCGCACCCATCGCCCTAAAACTCTTAACTCTCTCA  Raphanus raphanistrum subsp. maritimus
FD541534       --> ACTCCATCTTCTTCCACGATCCCATCGTCCTAAAACTCTCAACTCTCTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV551594       --> ACTCCATCTTCTTCCTCGCACCCATCGTCCTAAAACTCTTAACTCTCTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW731912       --> ACTCCATCTTCTTCCTCGAACCCATCGTCCTAAAACTCTTAACTCTCTCA  Raphanus sativus cv Rat-Tail Radish #3870
EY949522       --> ACTCCATCTTCTTCCTCGAACCCATCGTCCTAAAACTCTTAACTCTCTCA  Raphanus sativus cv Rat-Tail Radish #3870
FD947915       --> ACTCCATCTTCTTCCACGAACCAATCGTCCTAAAACTCTTAACTCTCTCA  Raphanus sativus cv Early Scarlet Globe
EX754480       --> ACTCCATCTTCTTCCTCGCACCCATCGTCCTAAAACTCTTAACTCTCTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX764525       --> ACTCCATCTTCTTCCTCGCACCCATCGCCCTAAAACTCTTAACTCTCTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940220       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD548580       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               151    -    201
UN16879        --> AACCAACCTCCAAATCACAACCTTGCAAGACCCCAGAACTACCCAACCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758795       <-- ..................................................
EV529544       <-- ..................................................
EX768426       <-- ..................................................
EX901071       <-- ..................................................
EY945024       <-- ..................................................
EW736306       <-- ..................................................
EX769113       <-- ..................................................
FD544749       <-- ..................................................
EY936011       <-- ..................................................
FY451298       --> AACCAACCTCCAAATCACAACCTTGCAAGACCCCGGAACTACCCAACCCC
FD947663       --> AACCAACCTCCAAAACACAACCTTGCAAGATCCCAGAACTAGCCAACCCC
EV524576       --> AACCAACCTCCAAATCACAACCTTGCAAGACCCCAGAATTACCCAACCCC
FD541534       --> AACCAACCTCCAAATCACAACCTTGCAAGATCCCAGAACTACCCAACCCC
EV551594       --> AACCAACCTCCAGATCACAACCTTGCAAGATCCCAGAACTACCCAACCCC
EW731912       --> AACCAACCTCCAAATCACAACCTTGCAAGACCCCGGAACTACCCAACCCC
EY949522       --> AACCAACCTCCAAATCACAACCTTGCAAGACCCCGGAACTACCCAACCCC
FD947915       --> AACCAACCTCCAAAACACAACCTTGCAAGATCCCAGAACTAGCCAACCCC
EX754480       --> AACCAACCTCCAGATCACAACCTTGCAAGACCCCAGAACTACCCAACCCC
EX764525       --> AACCAACCTCCAAATCACAACCTTGCAAGACCCCAGAACTACCCAACCCC
EY940220       --> ..CCAACCTCCAAAACACAACCTTGCAAGATCCCAGAACTAGCCAACCCC
FD548580       --> ..................................................

               201    -    251
UN16879        --> CTCCAGATCCTTAAATCATCTCCCCTCCCTCTCGCACTCACCGCATTGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758795       <-- ..................................................
EV529544       <-- ..................................................
EX768426       <-- ..................................................
EX901071       <-- ..................................................
EY945024       <-- ..................................................
EW736306       <-- ..................................................
EX769113       <-- ..................................................
FD544749       <-- ..................................................
EY936011       <-- ..................................................
FY451298       --> CTCCAGATCCTTAAATCATCTCCCCTCCCTCTCGCACTCACCGCATTGCC
FD947663       --> CTCCAGATCCTTAAATCATCTCCCCTCCCTCTCGCACTCACCGCATTGCC
EV524576       --> CTCCAGATCCTTAAATCATCTCCCCTCCCTCTCGCACTCACCGCATTGCC
FD541534       --> CTCCAGATCCTTAAATCATCTCCCCTCCCTCTCGCACTCACCGCATTGCC
EV551594       --> CTCCAGATCCTTAAATCATCTCCCTTCCCTCTCGCACTCACCGCATTGCC
EW731912       --> CTCCAGATCCTTAAATCATCTCCCCTCCCTCTCGCACTCACCGCATTGCC
EY949522       --> CTCCAGATCCTTAAATCATCTCCCCTCCCTCTCGCACTCACCGCATTGCC
FD947915       --> CTCCAGATCCTTAAATCATCTCCCCTCCCTCTCGCACTCACCGCATTGCC
EX754480       --> CTCCAGATCCTTAAATCATCACCCCTCCCTCTAGCACTCACCGCATTGCC
EX764525       --> CTCCAGATCCTTAAATCATCTCCC-TCCCTCTCGCACTCACCGCATTGCC
EY940220       --> CTCCAGATGCTTAAATCATCTCCCCTCCCTCTCGCACTCACCGCATTGCC
FD548580       --> ..................................................

               251    -    301
UN16879        --> CTTTCTCATCGATCCACAGGATGCAGCAGCAGCTGGAGGACAGTTTGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758795       <-- ...TCTCGTCGATCCACAGGATGCAGCAGCAGCTGGAGGACAGTTTGGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV529544       <-- ...............ACAGGATGCAGCAGCAGCTGGAGGACAGTTTGATA  Raphanus raphanistrum subsp. maritimus
EX768426       <-- .....................TGCAGCAGCAGCTGGAGGACAGTTTGGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901071       <-- .....................TGCAGCAGCAGCTGGAGGACAGTTTGGGA  Raphanus sativus cv Early Scarlet Globe
EY945024       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW736306       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX769113       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD544749       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY936011       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FY451298       --> CTTTCTCATTGATCCACAGGATGCAGCAGCAGCTGGAGGACAGTTTGGGA  Raphanus sativus cv GSK3-1
FD947663       --> CTTTCTCATCGATCCACAGGATGCAGCAGCAGCTGGAGGACAGTTTGGGA  Raphanus sativus cv Early Scarlet Globe
EV524576       --> CTTTCTCATCGATCCACAGGATGCAGCAGCAGCTGGAGGACAGTTTGATA  Raphanus raphanistrum subsp. maritimus
FD541534       --> CTTTCTCATCGATCCACAGGATGCAGCAGCAGCTGGAGGACAGTTTGGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV551594       --> CTTTCTCATCGATCCACAGGATGCAGCAGCAGCTGGAGGACAGTTTGGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW731912       --> CTTTCTCATTGATCCACAGGATGCAGCAGCAGCTGGAGGACAGTTTGGGA  Raphanus sativus cv Rat-Tail Radish #3870
EY949522       --> CTTTCTCATTGATCCACAGGATGCAGCAGCAGCTGGAGGACAGTTTGGGA  Raphanus sativus cv Rat-Tail Radish #3870
FD947915       --> CTTTCTCATCGATCCACAGGATGCAGCAGCAGCTGGAGGACAGTTTGGGA  Raphanus sativus cv Early Scarlet Globe
EX754480       --> CTTTCTCGTCGATCCACAGGATGCAGCAGCAGCTGGAGGACAGTTTGGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX764525       --> CTTTCTCATCGATCCACAGGATGCAGCAGCAGCTGGAGGACAGTTTGGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940220       --> CTTTCTCATCGATCCACAGGATGCAGCAGCAGCTGGAGGACAGTTTGGGA  Raphanus sativus cv Early Scarlet Globe
FD548580       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               301    -    351
UN16879        --> TCTTGGAAGGACGATCGTTCGCGTTGATACACCCGATAGTGATGGGAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758795       <-- TCTTGGAAGGACGATCGTTCGCGTTGATACACCCGATAGTGATGGGAGGT
EV529544       <-- TTTTGGAAGGACGATCGTTCGCGTTGATACACCCGATAGTGATGGGAGGT
EX768426       <-- TCTTGGAAGGACGATCGTTCGCGTTGATACACCCGATAGTGATGGGAGGT
EX901071       <-- TCTTGGAAGGACGATCGTTCGCGTTGATACACCCGATAGTGATGGGAGGT
EY945024       <-- ..................................................
EW736306       <-- ..................................................
EX769113       <-- ..................................................
FD544749       <-- ..................................................
EY936011       <-- ..................................................
FY451298       --> TCTTGGAAGGACGATCGTTCGCGTTGATACACCCGATAGTGATGGGAGGT
FD947663       --> TCTTGGAAGGACGATCGTTCGCGTTGATACACCCGATAGTGATGGGAGGT
EV524576       --> TTTTGGAAGGACGATCGTTCGCGTTGATACACCCGATAGTGATGGGAGGT
FD541534       --> TCTTGGAAGGACGATCGTTCGCGTTGATACACCCGATAGTGATGGGAGGT
EV551594       --> TCTTGGAAGGACGATCGTTCGCGTTGATACACCCGATAGTGATGGGAGGT
EW731912       --> TCTTGGAAGGACGATCGTTCGCGTTGATACACCCGATAGTGATGGGAGGT
EY949522       --> TCTTGGAAGGACGATCGTTCGCGTTGATACACCCGATAGTGATGGGAGGT
FD947915       --> TCTTGGAAGGACGATCGTTCGCGTTGATACACCCGATAGTGATGGGAGGT
EX754480       --> TCTTGGAAGGACGATCGTTCGCGTTGATACACCCGATAGTGATGGGAGGT
EX764525       --> TCTTGGAAGGACGATCGTTCGCGTTGATACACCCGATAGTGATGGGAGGT
EY940220       --> TCTTGGAAGGACGATCGTTCGCGTTGATACACCCGATAGTGATGGGAGGT
FD548580       --> .......................................gGATGGGAGGT

               351    -    401
UN16879        --> TTGTTCGTATACACTCTATACGCTGGTTACTTGGGTTGGCAATGGAGACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758795       <-- TTGTTCGTATACACTCTATACGCTGGTTACTTAGGTTGGCAATGGAGACG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV529544       <-- TTGTTCGTATACACTCTATACGCTGGTTACTTGGGTTGGCAATGGAGACG  Raphanus raphanistrum subsp. maritimus
EX768426       <-- TTGTTCGTATACACTCTATACGCTGGTTACTTGGGTTGGCAATGGAGACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901071       <-- TTGTTCGTATACACTCTATACGCTGGTTACTTGGGTTGGCAATGGAGACG  Raphanus sativus cv Early Scarlet Globe
EY945024       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW736306       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX769113       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD544749       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY936011       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FY451298       --> TTGTTCGTATACACTCTATACGCTGGTTACTTAGGTTGGCAATGGAGGCG  Raphanus sativus cv GSK3-1
FD947663       --> TTGTTCGTATACACTCTATACGCTGGTTACTTGGGTTGGCAATGGAGACG  Raphanus sativus cv Early Scarlet Globe
EV524576       --> TTGTTCGTATACACTCTATACGCTGGTTACTTGGGTTGGCAATGGAGACG  Raphanus raphanistrum subsp. maritimus
FD541534       --> TTGTTCGTATACACTCTATACGCTGGTTACTGAGGTTGGCAATGGAGGCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV551594       --> TTGTTCGTATACACTCTATACGCCGGTTACTTAGGTTGGCAATGGAGGCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW731912       --> TTGTTCGTATACACTCTATACGCTGGTTACTTAGGTTGGCAATGGAGGCG  Raphanus sativus cv Rat-Tail Radish #3870
EY949522       --> TTGTTCGTATACACTCTATACGCTGGTTACTTAGGTTGGCAATGGAGGCG  Raphanus sativus cv Rat-Tail Radish #3870
FD947915       --> TTGTTCGTATACACTCTATACGCTGGTTACTTGGGTTGGCAATGGAGACG  Raphanus sativus cv Early Scarlet Globe
EX754480       --> TTGTTCGTATACACTCTATACGCTGGTTACTTAGGTTGGCAATGGAGACG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX764525       --> TTGTTCGTATACACTCTATACGCTGGTTACTTGGGTTGGCAATGGAGACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940220       --> TTGTTCGTATACACTCTATACGCTGGTTACTTGGGTTGGCAATGGAGACG  Raphanus sativus cv Early Scarlet Globe
FD548580       --> TTGTTCGTATACACTCTGTACGCCGGTTACTTAGGTTGGCAATGGAGGCG  Raphanus raphanistrum subsp. raphanistrum (NY)

               401    -    451
UN16879        --> TGTGCGTACCATCCAAAGCGAGATCAACGAGCTCAAGAAACAGGTTAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758795       <-- TGTGCGTACCATCCAAAGCGAGATCAACGAGCTCAAGAAACAGGTTAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV529544       <-- TGTGCGTACCATCCAAAGCGAGATCAACGAGCTCAAGAAGCAGGTTAAGC  Raphanus raphanistrum subsp. maritimus
EX768426       <-- TGTGCGTACCATCCAAAGCGAGATCAACGAGCTCAAGAAGCAGGTTAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901071       <-- TGTGCGTACCATCCAAAGCGAGATCAACGAACTCAAGAAGCAGGTTAAGC  Raphanus sativus cv Early Scarlet Globe
EY945024       <-- ............CCAAAGCGAGATCAACGAGCTCAAGAAACAGGTTAAGC  Raphanus sativus cv Rat-Tail Radish #3870
EW736306       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX769113       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD544749       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY936011       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FY451298       --> TGTGCGTACCATCCAAAGCGAGATCAACGAGCTCAAGAAACAGGTTAAGC  Raphanus sativus cv GSK3-1
FD947663       --> TGTGCGTACCATCCAAAGCGAGATCAACGAACTCAAGAAGCAGGTTAAGC  Raphanus sativus cv Early Scarlet Globe
EV524576       --> TGTGCGTACCATCCAAAGCGAGATCAACGAGCTCAAGAAGCAGGTTAAGC  Raphanus raphanistrum subsp. maritimus
FD541534       --> TGTGCGTACCATCCAAAGCGAGATCAACGAGCTCAAGAAACAGGTTAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV551594       --> TGTGCGTACCATCCAAAGCGAGATCAATGAACTCAAGAAACAGGTTAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW731912       --> TGTGCGTACCATCCAAAGCGAGATCAACGAGCTCAAGAAACAGGTTAAGC  Raphanus sativus cv Rat-Tail Radish #3870
EY949522       --> TGTGCGTACCATCCAAAGCGAGATCAACGAGCTCAAGAAACAGGTTAAGC  Raphanus sativus cv Rat-Tail Radish #3870
FD947915       --> TGTGCGTACCATCCAAAGCGAGATCAACGAACTCAAGAAGCAGGTTAAGC  Raphanus sativus cv Early Scarlet Globe
EX754480       --> TGTGCGTACCATCCAAAGCGAGATCAACGAGCTCAAGAAACAGGTTAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX764525       --> TGTGCGTACCATCCAAAGCGAGATCAACGAGCTCAAGAAGCAGGTTAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940220       --> TGTGCGTACCATCCAAAGCGAGATCAA.......................  Raphanus sativus cv Early Scarlet Globe
FD548580       --> TGTGCGTACCATCCAAAGCGAGATCAATGAACTCAAGAAACAGGTTAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)

               451    -    501
UN16879        --> CGACTCCTGTTTCTCCCGACGGATCCACGGTCGTTGACCCTCCTTCTGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758795       <-- CGACTCCTGTTTCTCCCGATGGATCCGCGGTCGTTGGCCCTCCTTCTGCG
EV529544       <-- CGACTCCTGTTTCTCCCGACGGATCCACGGTCGTTGACCCTCCTTCTGCG
EX768426       <-- CGACTCCTGTTTCTCCCGACGGATCCACGGTCGTTGACCCTCCTTCTGCG
EX901071       <-- CGACTCCTGTTTCTCCCGACGGATCCACGGTCGTTGACCCTCCTTCTGCG
EY945024       <-- CGACTCCTGTTTCTCCCGATGGATCCACGGTCGTTGACCCTCCTTCTGCG
EW736306       <-- .........................CACGGTCGTTGACCCTCCTTCTGCA
EX769113       <-- ..................................................
FD544749       <-- ..................................................
EY936011       <-- ..................................................
FY451298       --> CGACTCCTGTTTCTCCCGATGGATCCACGGTCGTTGACCCTCCTTCTGCG
FD947663       --> CGACTCCTGTTTCTCCCGACGGATCCACGGTCGTTGACCCTCCTTCTGCG
EV524576       --> CGACTCCTGTTTCTCCCGACGGATCCACGGTCGTTGACCCTCCTTCTGCG
FD541534       --> CGACTCCTGTTTCTCCCGGCGGATCCACGGTCGTTGACCCTCCTTCTGCG
EV551594       --> CGACTCCTGTTTCTCCCGATGGATCCACGGTCGTTGACCCTCCTTCTGCG
EW731912       --> CGACTCCTGTTTCTCCCGATGGATCCACGGTCGTTGACCCTCCTTCTGCA
EY949522       --> CGACTCCTGTTTCTCCCGATGGATCCACGGTCGTTGACCCTCCTTCTGCG
FD947915       --> CGACTCCTGTTTCTCCCGACGGATCCACGGTCGTTGACCCTCCTTCTGCG
EX754480       --> CGACTCCTGTTTCTCCCGATGGATCCGCGGTCGTTGGCCCTCCTTCTGCG
EX764525       --> CGACTCCTGTTTCTCCCGACGGATCCACGGTCGTTGACCCTCCTTCTGCG
EY940220       --> ..................................................
FD548580       --> CGACTCCTGTTTCTCCCGACGGATCCACGGTCGTTGACCCTCCTTCTGCG

               501    -    551
UN16879        --> ACTGAGCTTGAGATCCGACGGTTGACGGAAGAGAGGAAAGAGTTGGTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758795       <-- ACTGAGCTTGAGATCCGACGGTTGACGGAAGAGAGGAAAGAGTTGGTCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV529544       <-- ACTGAGCTTGAGATCCGACGGTTGACGGAAGAGAGGAAAGAGTTGATCAA  Raphanus raphanistrum subsp. maritimus
EX768426       <-- ACTGTGCTTGAGATCCGACGGTTGACGGAAGAGAGGAAAGAGTTGGTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901071       <-- ACGGAGCTTGAGATCCGACGGTTGACGGAAGAGAGGAAAGAGTTGGTCAA  Raphanus sativus cv Early Scarlet Globe
EY945024       <-- ACTGAGCTTGAGATCCGACGGTTGACGGAAGAGAGGAAAGAGTTGGTCAA  Raphanus sativus cv Rat-Tail Radish #3870
EW736306       <-- ACTGAGCTTGAGATCCGACGGTTGACGGAAGAGAGGAAAGAGTTGGTCAA  Raphanus sativus cv Rat-Tail Radish #3870
EX769113       <-- ................GACGGTTGACGGAAGAGAGGAAAGAGTTGGTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD544749       <-- ................GACGGTTGACGGAAGAGAGGAAAGAGTTGGTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY936011       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FY451298       --> ACTGAGCTTGAGATCCGACGGTTGACGGAAGAGAGGAAAGAGTTGGTCAA  Raphanus sativus cv GSK3-1
FD947663       --> ACGGAGCTTGAGATCCGACGGTTGACGGAAGAGAGGAAAGAGTTGGTCAA  Raphanus sativus cv Early Scarlet Globe
EV524576       --> ACTGAGCTTGAGATCCGACGGTTGACGGAAGAGAGGAAAGAGTTGATCAA  Raphanus raphanistrum subsp. maritimus
FD541534       --> ACTGAGCTTGAGATCCGACGGTTGACGGAAGAGAGGAAAGAGTTGGTCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV551594       --> ACGGAGCTTGAGATCCGACGGTTGACGGAAGAGAGGAAAGAGTTGGTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW731912       --> ACTGAGCTTGAGATCCGACGGTTGACGGAAGAGAGGAAAGAGTTGGTCAA  Raphanus sativus cv Rat-Tail Radish #3870
EY949522       --> ACTGAGCTTGAGATCCGACGGTTGACGGAAGAGAGGAAAGAGTTGGTCAA  Raphanus sativus cv Rat-Tail Radish #3870
FD947915       --> ACGGAGCTTGAGATCCGACGGTTGACGGAAGAGAGGAAAGAGTTGGTCAA  Raphanus sativus cv Early Scarlet Globe
EX754480       --> ACTGAGCTTGAGATCCGACGGTTGACGGAAGAGAGGAAAGAGTTGGTCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX764525       --> ACTGTGCTTGAGATCCGACGGTTGACGGAAGAGAGGAAAGAGTTGGTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940220       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD548580       --> ACGGAGCTTGAGATCCGACGGTTGACGGAAGAGAGGAAAGAGTTGGTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)

               551    -    601
UN16879        --> AGGGTCTTACAGAGACAAACACTTTGACGCGGGCTCTGTTTTGTTAGGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758795       <-- AGGGTCTTACAGAGACAAACACTTTGACGCGGGCTCTGTTTTGTTAGGGC
EV529544       <-- AGGGTCTTACAGAGACAAACACTTTGACGCGGGCTCTGTTTTGTTAGGGT
EX768426       <-- AGGGTCTTACAGAGACAAACACTTTGACGCGGGCTCTGTTTTGTTAGGGT
EX901071       <-- AGGGTCTTACAGAGACAAACACTTTGACGCGGGCTCTGTTTTGTTAGGGT
EY945024       <-- AGGGTCTTACAGAGACAAACACTTTGACGCGGGCTCTGTTTTGTTAGGGT
EW736306       <-- AGGGTCTTACAGAGACAAACACTTTGACGCGGGCTCTGTTTTGTTAGGGT
EX769113       <-- AGGGTCTTACAGAGACAAACACTTTTACGCGGGCTCTGTTTTGTTAGGGT
FD544749       <-- AGGGTCTTACAGAGACAAACACTTTGACGCGGGCTCTGTTTTGTTAGGGT
EY936011       <-- ........ACAGAGACAAACACTTTGACGCGGGCTCTGTTTTGTTAGGGT
FY451298       --> AGGGTCTTACAGAGACAAACACTTTGACGCGGGCTCTGTTTTGTTAGGGT
FD947663       --> AGGGTCTTACAGAGACAAACACTTTGACGCGGGCTCTGTTTTGTTAGGGT
EV524576       --> AGGGTCTTACAGAGACAAACACTTTGACGCGGGCTCTGTTTTGTTAGGGT
FD541534       --> AGGGTCTTACAGAGACAAACACTTTGACGCAGGCTCTGTTTTGTTAGGGT
EV551594       --> AGGGTCTTACAGAGACAAACACTTTGACGCAGGCTCTGTTTTGTTAGGGT
EW731912       --> AGGGTCTTACAGAGACAAACACTTTGACGCGGGCTCTGTTTTGTTAGGGT
EY949522       --> AGGGTCTTACAGAGACAAACACTTTGACGCGGGCTCTGTTTTGTTAGGGT
FD947915       --> AGGGTCTTACAGAGACAAACACTTTGACGCGGGCTCTGTTTTGTTAGGGT
EX754480       --> AGGGTCTTACAGAGACAAACACTTTGACGCGGGCTCTGTTTTGTTAGGGC
EX764525       --> AGGGTCTTACAGAGACAAACACTTTGACGCGGGCTCTGTTTTGTTAGGGT
EY940220       --> ..................................................
FD548580       --> AGGGTCTTACAGAGACAAACACTTTGACGCGGGCTCTGTTTTGTTAGGGT

               601    -    651
UN16879        --> TTGGTGTTTTGGAAGCTGTGTTTGGTGGTCTTAATACTTATCTTCGTACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758795       <-- TTGGTGTTTTGGAAGCTGTGTTTGGTGGTCTTAACACTTATCTTCGTACC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV529544       <-- TTGGTGTTTTGGAAGCTGTGTTTGGTGGTCTTAATACTTATCTTCGTACC  Raphanus raphanistrum subsp. maritimus
EX768426       <-- TTGGTGTTTTGGAAGCTGTGTTTGGTGGTCTTAATACTTATCTTCGTACC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901071       <-- TTGGTGTTTTGGAAGCTGTGTTTGGTGGTCTTAATACTTATCTTCGTACC  Raphanus sativus cv Early Scarlet Globe
EY945024       <-- TTGGTGTTTTGGAAGCTGTGTTTGGTGGTCTTAATACTTATCTTCGTACC  Raphanus sativus cv Rat-Tail Radish #3870
EW736306       <-- TTGGTGTTTTGGAAGCTGTGTTTGGTGGTCTTAATACTTATCTTCGTACC  Raphanus sativus cv Rat-Tail Radish #3870
EX769113       <-- TTGGTGTTTTGGAAGCTGTGTTTGGTGGTCTTAACACTTATCTTCGTACC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD544749       <-- TTGGTGTTTTGGAAGCTGTGTTTGGTGGTCTTAACACTTATCTTCGTACC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY936011       <-- TTGGTGTTTTGGAAGCTGTGTTTGGTGGTCTTAATACTTATCTTCGTACC  Raphanus sativus cv Early Scarlet Globe
FY451298       --> TTGGTGTTTTGGAAGCTGTGTTTGGTGGTCTTAATACTTATCTTCGTACC  Raphanus sativus cv GSK3-1
FD947663       --> TTGGTGTTTTGGAAGCTGTGTTTGGTGGTCTTAATACTTATCTTCGTACC  Raphanus sativus cv Early Scarlet Globe
EV524576       --> TTGGTGTTTTGGAAGCTGTGTTTGGTGGTCTTAATACTTATCTTCGTACC  Raphanus raphanistrum subsp. maritimus
FD541534       --> TTGGTGTTTTGGAAGCTGTGTTTGGTGGTCTTAACACTTATCTTCGTACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV551594       --> TTGGTGTTTTGGAAGCTGTGTTTGGTGGTCTTAACACTTATCTTCGTACC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW731912       --> TTGGTGTTTTGGAAGCTGTGTTTGGTGGTCTTAATACTTATCTTCGTACC  Raphanus sativus cv Rat-Tail Radish #3870
EY949522       --> TTGGTGTTTTGGAAGCTGTGTTTGGTGGTCTTAATACTTATCTTCGTACC  Raphanus sativus cv Rat-Tail Radish #3870
FD947915       --> TTGGTGTTT-GGAAG...................................  Raphanus sativus cv Early Scarlet Globe
EX754480       --> TTGGTGTTTTGGAAGCTGTGTTTGGTGGTCTTAACACTTATCTTCGTACC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX764525       --> TTGGTGTTTTGGAAGCTGTGTTTGGTGGTCTTAATACTTATCTTCGTACC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940220       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD548580       --> TTGGTGTTTTGGAAGCTGTGTTTGGTGGTCTTAACACTTATCTTCGTACC  Raphanus raphanistrum subsp. raphanistrum (NY)

               651    -    701
UN16879        --> GGTAAACTCTTCCCCGGTCCTCATCTTTACGCTGGAGCAGGGATAACGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758795       <-- GGTAAACTCTTCCCCGGTCCTCATCTTTACGCCGGTGCAGGGATAACGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV529544       <-- GGTAAACTCTTCCCTGGTCCTCATCTTTACGCTGGAGCAGGGATAACGGT  Raphanus raphanistrum subsp. maritimus
EX768426       <-- GGTAAACTCTTCCCTGGTCCTCATCTTTACGCTGGAGCAGGGATAACGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901071       <-- GGTAAACTCTTCCCTGGTCCTCATCTTTACGCTGGAGCAGGGATAACGGT  Raphanus sativus cv Early Scarlet Globe
EY945024       <-- GGTAAACTCTTCCCCGGTCCTCATCTTTACGCTGGAGCAGGGATAACGGT  Raphanus sativus cv Rat-Tail Radish #3870
EW736306       <-- GGTAAACTCTTCCCCGGTCCTCATCTTTACGCTGGAGCAGGGATAACGGT  Raphanus sativus cv Rat-Tail Radish #3870
EX769113       <-- GGTAAACTCTTCCCCGGTCCTCATCTTTACGCCGGTGCAGGGATAACGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD544749       <-- GGTAAACTCTTCCCCGGTCCTCATCTTTACGCCGGTGCAGGGATAACGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY936011       <-- GGTAAACTCTTCCCTGGTCCTCATCTTTACGCTGGAGCAGGGATAACGGT  Raphanus sativus cv Early Scarlet Globe
FY451298       --> GGTAAACTCTTCCCCGGTCCTCATCTTTACGCTGGAGCAGGGATAACGGT  Raphanus sativus cv GSK3-1
FD947663       --> GGTAAACTCTTCCCTGGTCCTCATCTTTACGCTGGA..............  Raphanus sativus cv Early Scarlet Globe
EV524576       --> GGTAAACTCTTCCCTGGTCCTCATCTTTACGCTGGAGCAGGGATAACGGT  Raphanus raphanistrum subsp. maritimus
FD541534       --> GGAAAA............................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV551594       --> GGTAAACTCTTCCCCGGTCCTCATCTTTACGCTGGAGCAGGGATAACGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW731912       --> GGTAAACTCTTCCCCGGTCCTCATCTTTACGCTGGAGCAGGGATAACGGT  Raphanus sativus cv Rat-Tail Radish #3870
EY949522       --> GGTAAACTCTTCCCCGGTCCTCATCTTTACGCTGGA..............  Raphanus sativus cv Rat-Tail Radish #3870
FD947915       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX754480       --> GGTAAACTCTTCCCCGGTCCTCATCTTTACGCCGGTGCAGGGATAACGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX764525       --> GGTAAACTCTTCCCTGGTCCTCATCTTTACGCTGGAGCAGGGATAACGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940220       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD548580       --> GGTAAACTCTTCCCCGGTCCTCATCTTTACGCCGGTGCAGGGATAACGGT  Raphanus raphanistrum subsp. raphanistrum (NY)

               701    -    751
UN16879        --> GCTATGGGCTGCTGCAGCGGCTTTGGTACCGGCAATGCAAAAAGGGAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758795       <-- ACTATGGGCTGCTGCAGCGGCTTTGGTACCGGCAATGCAAAAAGGGAATG
EV529544       <-- GCTATGGGCTGCTGCAGCGGCTTTGGTACCGGCAATGCAAAAAGGGAATG
EX768426       <-- GCTATGGGCTGCTGCAGCGGCTTTGGTACCGGCAATGCAAAAAGGGAATG
EX901071       <-- GCTATGGGCTGCTGCAGCGGCTTTGGTACCGGCAATGCAAAAAGGGAATG
EY945024       <-- GCTATGGGCTGCTGCAGCGGCTTTGGTACCGGCAATGCAAAAAGGGAATG
EW736306       <-- GCTATGGGCTGCTGCAGCGGCTTTGGTACCGGCAATGCAAAAAGGGAATG
EX769113       <-- GCTATGGGCTGCTGCAGCGGCTTTGGTACCGGCAATGCAAAAAGGGAATG
FD544749       <-- GCTATGGGCTGCTGCAGCGGCTTTGGTACCGGCAATGCAAAAAGGGAATG
EY936011       <-- GCTATGGGCTGCTGCAGCGGCTTTGGTACCGGCAATGCAAAAAGGGAATG
FY451298       --> GCTATGGGCTGCTGCAGCGGCTTTGGTACCGGCAATGCAAAAAGGGAATG
FD947663       --> ..................................................
EV524576       --> GCTATGGGCTGCTGCAGCGGCTTTGGTACCGGCAATGCAAAAAGGGAATG
FD541534       --> ..................................................
EV551594       --> GCTATGGGCTGCTGCAGCGGCTTTGGTACCGGCAATGCAAAAAGGGAATG
EW731912       --> GCTATGGGCTGCTGCAGCGGCTTTGGTACCGGCAATGCAAAAAGGGAATG
EY949522       --> ..................................................
FD947915       --> ..................................................
EX754480       --> ACTATGGGCTGCTGCAGCGGCTTTGGTAC.....................
EX764525       --> GCTATGGGCTGCTGCAGCGGCTTTGGTACCGGCAAT..............
EY940220       --> ..................................................
FD548580       --> GCTATGGGCTGCTGCAGCGGCTTTGGTACCGGCAATGCAAAAAGGGAATG

               751    -    801
UN16879        --> AGACGGCGAGGAATCTACACATTGCGTTGAACGGTCTCAATGTTCTTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758795       <-- AGACGGCGAGGAATCTACACATTGCGTTGAACGGTCTCAATGTTCTTCTT
EV529544       <-- AGACGGCGAGGAATCTACACATTGCGTTGAACGGTCTCAATGTTCTTCTT
EX768426       <-- AGACGGCGAGGAATCTACACATTGCGTTGAACGGTCTCAATGTTCTTCTT
EX901071       <-- AGACGGCGAGGAATCTACACATTGCGTTGAACGGTCTCAATGTTCTTCTT
EY945024       <-- AGACGGCGAGGAATCTACACATTGCGTTGAACGGTCTCAATGTTCTTCTT
EW736306       <-- AGACGGCGAGGAATCTACACATTGCGTTGAACGGTCTCAATGTTCTTCTT
EX769113       <-- AGACGGCGAGGAATCTACACATTGCGTTGAACGGTCTCAATGTTTTTCTT
FD544749       <-- AGACGGCGAGGAATCTACACATTGCGTTGAACGGTCTCAATGTTCTTCTT
EY936011       <-- AGACGGCGAGGAATCTACACATTGCGTTGAACGGTCTCAATGTTCTTCTT
FY451298       --> AGACGGCGAGGAATCTACACATTGCGTTGAACGGTCTCAATGTTCTTCTT
FD947663       --> ..................................................
EV524576       --> AGACGGCGAGGAATCTACACATTGCGTTGAACGGTCTCAATGTTCTTCTT
FD541534       --> ..................................................
EV551594       --> AGACGGCGAGGAATCTACACATTGCGTTGAACGGTCTCAATGTTCTT...
EW731912       --> AGACGGCGAGGAATCTACACATTGCGTTGAACGGTCTCAATGTTCTTCTT
EY949522       --> ..................................................
FD947915       --> ..................................................
EX754480       --> ..................................................
EX764525       --> ..................................................
EY940220       --> ..................................................
FD548580       --> AGACGGCGAGGAATCTACACATTGCGTTGAACGGTCTCAATGTTCTTCTT

               801    -    851
UN16879        --> TTCATTTGGCAAATCCCAACAGGTTTTGATATCGTACTTAAGGTCTTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758795       <-- TTCATTTGGCAAATCCCAACAGGTTTTGATATCGTACTTAAGGTCTTTGA
EV529544       <-- TTCATTTGGCAAATCCCAACAGGTTTTGATATCGCACTTAAGGTCTTTGA
EX768426       <-- TTCATTTGGCAAATCCCAACAGGTTTTGATATCGTACTTAAGGTCTTTGA
EX901071       <-- TTCATTTGGCAAATCCCAACAGGTTTTGATATCGTACTTAAGGTCTTTGA
EY945024       <-- TTCATTTGGCAAATCCCAACAGGTTTTGATATCGTACTTAAGGTCTTTGA
EW736306       <-- TTCATTTGGCAAATCCCAACAGGTTTTGATATCGTACTTAAGGTCTTTGA
EX769113       <-- TTCATTTGGCAAATCCCAACAGGTTTTGATATCGTACTTAAGGTCTTTGA
FD544749       <-- TTCATTTGGCAAATCCCAACAGGTTTTGATATCGTACTTAAGGTCTTTGA
EY936011       <-- TTCATTTGGCAAATCCCAACAGGTTTTGATATCGTACTTAAGGTCTTTGA
FY451298       --> TTCATTTGG.........................................
FD947663       --> ..................................................
EV524576       --> TTCATTTGGCAAATCCCA................................
FD541534       --> ..................................................
EV551594       --> ..................................................
EW731912       --> TTCATTTGGCAAATCCCA................................
EY949522       --> ..................................................
FD947915       --> ..................................................
EX754480       --> ..................................................
EX764525       --> ..................................................
EY940220       --> ..................................................
FD548580       --> TTCATTTGGCAAATCCCAACAGGTTTTGATATCGTACTTAAGGTCTTTGA

               851    -    901
UN16879        --> GTTCACGAAATGGCCTTAAACCCTTCACTTGTTGTTTGTGGTCTCTTTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758795       <-- GTTCACGAAATGGCCTTAAACCCTTCACTCCTTGTTTGTGGTCTCTTTCG
EV529544       <-- GTTCACGAAATGGCCTTAAACCCTTCACTCCTTGTTTGTGGTCTCTTTCG
EX768426       <-- GTTCACGAAATGGCCTTAAACCCTTCACTCCTTGTTTGTGGTTTCTTTCG
EX901071       <-- GTTCACGAAATGGCCTTAAACCCTTCACTTGTTGTGTGTGGTCTCTTTCG
EY945024       <-- GTTCACGAAATGGCCTTAAACCCTTCACTCGTTGTTTGTGGTCTCTTTCG
EW736306       <-- GTTCACGAAATGGCCTTAAACCCTTCACTCGTTGTTTGTGGTCTCTTTCG
EX769113       <-- GTTCACGAAATGGCCTTAAACCCTTCGCTTGTTGTGTGTGGTCTCTTTCG
FD544749       <-- GTTCACGAAATGGCCTTAAACCCTTCGCTTGTTGTGTGTGGTCTCTTTCG
EY936011       <-- GTTCACGAAATGGCCTTAAACCCTTCACTTGTTGTGTGAGGTTTCTTTCG
FY451298       --> ..................................................
FD947663       --> ..................................................
EV524576       --> ..................................................
FD541534       --> ..................................................
EV551594       --> ..................................................
EW731912       --> ..................................................
EY949522       --> ..................................................
FD947915       --> ..................................................
EX754480       --> ..................................................
EX764525       --> ..................................................
EY940220       --> ..................................................
FD548580       --> GTTCACGAAATGGCCTTAAACCCTTCGCTTGTTGTGTGTGGTCTCTTTCG

               901    -    951
UN16879        --> CTTTTGTTTTTTTTT-CTTTGTCTTTACAGTTCTATGTAGTTGTTGGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758795       <-- CTTTTGTTTTTTTTTTCTTTGTCTTTACAGTTCTATGTAGTTGTTGGACT
EV529544       <-- CTTTTGTTTTTTTTTTCTTTGTCTTTACAGTTCTATGTAGTTGTTGGACT
EX768426       <-- CTTTTGTTTTTTTTT-CTTTGTCTTTACAGTTCTATGTAGTTGTTGGACT
EX901071       <-- CTTTTGTTTTTTTT--C-TTCTCTTTACAGTT----CTAGTTGTTGGACT
EY945024       <-- CTTTTGTTTTTTTTT-CTTTGTCTTTACAGTTCTATGTAGTTGTTGGACT
EW736306       <-- CTTTTGTTTTTTTTT-CTTTGTCTTTACAGTTCTATGTAGTTGTTGGACT
EX769113       <-- CTTTTGTTTTTTTTTTCCTTCTCTTTACAGTT----CTAGTTGTTGGACT
FD544749       <-- CTTTTGTTTTTTTTTTCCTTCTCTTTACAGTT----CTAGTTGTTGGACT
EY936011       <-- CTTTTGTTTTTTTTT-CTT-CTCTTTACAGTT----CTAGTTGTTGGACT
FY451298       --> ..................................................
FD947663       --> ..................................................
EV524576       --> ..................................................
FD541534       --> ..................................................
EV551594       --> ..................................................
EW731912       --> ..................................................
EY949522       --> ..................................................
FD947915       --> ..................................................
EX754480       --> ..................................................
EX764525       --> ..................................................
EY940220       --> ..................................................
FD548580       --> CTTTTGTTTTT.......................................

               951    -   1001
UN16879        --> TGTAATATGAGTCTTGACTCTATATATAAGCAAAGTCTTCTGCAAACTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758795       <-- TGTAATATGAGTCTTGACTCTATATATAAGCAAAGTCTTCTGCAAACTTT
EV529544       <-- TGTAATATGAGTCTTGACTCTATATATAAGCAAAGTCTTCTGCAACTTTT
EX768426       <-- TGTAATATGAGTCTTGACTCTATATATAAGCAAAGTCTTCTac.......
EX901071       <-- TGTAATATGAGTCTTGACTCTATATATAAGCAAAGTCTTCTGCAAACTTT
EY945024       <-- TGTAATATGAGTCTTGACTCTATATATAAGCAAAGTCTTCTGCAA-CTTT
EW736306       <-- TGTAATATGAGTCTTGACTCTATATATAAGCAAAGTCTTCTGCAA-CTTT
EX769113       <-- TGTAATATGAGTCTTGACTCTATATATAAGCAAAGTCTTCTGCAAACTTT
FD544749       <-- TGTAATATGAGTCTTGACTCTATATATAAGCAAAGTCTTCTGCAAACTTT
EY936011       <-- TGTAATATGAGTCTTGACTCTATATATAAGCAAAGTCTTCTGCAAACTTT
FY451298       --> ..................................................
FD947663       --> ..................................................
EV524576       --> ..................................................
FD541534       --> ..................................................
EV551594       --> ..................................................
EW731912       --> ..................................................
EY949522       --> ..................................................
FD947915       --> ..................................................
EX754480       --> ..................................................
EX764525       --> ..................................................
EY940220       --> ..................................................
FD548580       --> ..................................................

               1001   -   1051
UN16879        --> T-TTTTTGTTTTTGTAAATGCTGAATTGTAAAAATTCGTGAGTGGATGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758795       <-- T-TTTTTGTTTTTGT...................................
EV529544       <-- TGTTTTTGTTTTTGTAAATGCTGAATTGTAAAAATTCGTGAGTGGATGCC
EX768426       <-- ..................................................
EX901071       <-- T-TTTTTGTTTTTGTAAATGCTGAA.........................
EY945024       <-- T-TTTT-GTTTTTGTAAATGCTGAATTGTAAAAATTCGTGAGTGGATGCC
EW736306       <-- T-TTTTTGTTTTTGTAAATGCTGAATTGTAAAAATTCGTGAGTGGATGCC
EX769113       <-- T-TTTT-GTTTTTGTAAATGCTGAATTGTAAAAATTCGTGAGTGGATGCC
FD544749       <-- T-TTTTTGTTTTTGTAAATGCTGAATTGTAAAAATTCGTGAGTGGATGCC
EY936011       <-- T-TTTT-GTTTTTGTAAATGCTGAATTGTAAAAATTCGTGAGTGGATGCC
FY451298       --> ..................................................
FD947663       --> ..................................................
EV524576       --> ..................................................
FD541534       --> ..................................................
EV551594       --> ..................................................
EW731912       --> ..................................................
EY949522       --> ..................................................
FD947915       --> ..................................................
EX754480       --> ..................................................
EX764525       --> ..................................................
EY940220       --> ..................................................
FD548580       --> ..................................................

               1051   -   1101
UN16879        --> GATACGATATATGGTTCAACAACATTCTTAGCCATGTGTTTTTCAGAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758795       <-- ..................................................
EV529544       <-- GATACGATATATGGTTCAACAACATTCTTCGCCATGTGTTTTTCAGAGTA
EX768426       <-- ..................................................
EX901071       <-- ..................................................
EY945024       <-- GATACGATATATGGTTCAACAACATTCTTAGCCATGTGTTTTTCAGAGTA
EW736306       <-- GATACGATATATGGTTCAACAACATTCTTAGCCATGTGTTTTTCAGAGTA
EX769113       <-- GATACGATATATGGTTC.................................
FD544749       <-- GATACGATATATGGTTC.................................
EY936011       <-- GATACGATATATGTTTCAACAACATTCTc.....................
FY451298       --> ..................................................
FD947663       --> ..................................................
EV524576       --> ..................................................
FD541534       --> ..................................................
EV551594       --> ..................................................
EW731912       --> ..................................................
EY949522       --> ..................................................
FD947915       --> ..................................................
EX754480       --> ..................................................
EX764525       --> ..................................................
EY940220       --> ..................................................
FD548580       --> ..................................................

               1101   -   1151
UN16879        --> TTAATTTCTGCTGTAATGGTTTCAATGTACAATAATTCTAGTACTTTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758795       <-- ..................................................
EV529544       <-- TTAATT............................................
EX768426       <-- ..................................................
EX901071       <-- ..................................................
EY945024       <-- TT................................................
EW736306       <-- TTAATTTCTGCTGTAATGGTTTCAATGTACAATAATTCTAGTACTTTGGT
EX769113       <-- ..................................................
FD544749       <-- ..................................................
EY936011       <-- ..................................................
FY451298       --> ..................................................
FD947663       --> ..................................................
EV524576       --> ..................................................
FD541534       --> ..................................................
EV551594       --> ..................................................
EW731912       --> ..................................................
EY949522       --> ..................................................
FD947915       --> ..................................................
EX754480       --> ..................................................
EX764525       --> ..................................................
EY940220       --> ..................................................
FD548580       --> ..................................................

               1151   -   1201
UN16879        --> TAA
                   ~~~
EX758795       <-- ...
EV529544       <-- ...
EX768426       <-- ...
EX901071       <-- ...
EY945024       <-- ...
EW736306       <-- TAA
EX769113       <-- ...
FD544749       <-- ...
EY936011       <-- ...
FY451298       --> ...
FD947663       --> ...
EV524576       --> ...
FD541534       --> ...
EV551594       --> ...
EW731912       --> ...
EY949522       --> ...
FD947915       --> ...
EX754480       --> ...
EX764525       --> ...
EY940220       --> ...
FD548580       --> ...