1      -     51
UN16889        --> AAACTAATAACTATTGAAGTAGTAATCATTAGCAAAAGCCAGACTAATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923762       <-- AAACTAATAACTATTGAAGTAGTAATCATTAGCAAAAGCCAGACTAATCA
EV565960       <-- ...........................................CTAATCA
EV566284       <-- ...........................................CTAATCA
FD947660       <-- ..................................................
EY919514       --> AAACTAATAACTATTGAAGTAGTAATCATTAGCAAAAGCCAGACTAATCA
FD943565       --> ..................................................
FD575880       --> ..................................................
FD575914       --> ..................................................
EV571451       --> ..................................................

               51     -    101
UN16889        --> TAGCAGAAAATGTTGATCAAATTAACAAAAAGCATTCAACTTCGAAA-CT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923762       <-- TAGCAGAAAATGTTGATCAAATTAACAAAAAGCATACAACTTCGAAA-CT
EV565960       <-- TAGCAGAAAATGTTGATCAAATTAACAAAAAGCATTCAACTTCGAAA-CT
EV566284       <-- TAGCAGAAAATGTTGATCAAATTAACAAAAAGCATTCAACTTCGAAAACT
FD947660       <-- ...............................GCATTCAACTTCGAAA-CT
EY919514       --> TAGCAGAAAATGTTGATCAAATTAACAAAAAGCATACAACTTCGAAA-CT
FD943565       --> ...............................GCATTCAACTTCGAAA-CT
FD575880       --> ................................CATTCAACTTCGAAA-CT
FD575914       --> ..................................................
EV571451       --> ..................................................

               101    -    151
UN16889        --> CTTTCACAAAATTC-AAAAAACAAACATTGTTCTGACAAACTGAAACAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923762       <-- CTTTCACAAAATTC-AAAAAACAAACATTGTTCTGACAAACTGAAACAAA  Raphanus raphanistrum subsp. landra
EV565960       <-- CTTTCACAAAATTC-AAAAAACAAACATTGTTCTGACAAACTGAAACAAA  Raphanus raphanistrum subsp. landra
EV566284       <-- CTTTCACAAAATTC-AAAAAACAAACATTGTTCTGACAAACTGAAACAAA  Raphanus raphanistrum subsp. landra
FD947660       <-- CTTTCACAAAATTCGAAAAAACAAACATTGTTCTGACAAACTGAAACAAA  Raphanus sativus cv Early Scarlet Globe
EY919514       --> CTTTCACAAAATTC-AAAAAACAAACATTGTTCTGACAAACTGAAACAAA  Raphanus raphanistrum subsp. landra
FD943565       --> CTTTCACAAAATTCGAAAAAACAAACATTGTTCTGACAAACTGAAACAAA  Raphanus sativus cv Early Scarlet Globe
FD575880       --> CTTTCACAAAATTCGAAAAAACAAACATTGTTCTGACAAACTGAAACAAA  Raphanus sativus cv Early Scarlet Globe
FD575914       --> ..................AAACAAACATTGTTCTGACAAACTGAAACAAA  Raphanus sativus cv Early Scarlet Globe
EV571451       --> ..................................................  Raphanus raphanistrum subsp. landra

               151    -    201
UN16889        --> TGAGCCAAAAAAAAAA-TCTCAGAGCCTCCTTCCTCTTCTACCACCCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923762       <-- TGAGCCAAAAAAAAAAATCTCAGAGCCTCCTTCCTCTTCTACCACCCTTT  Raphanus raphanistrum subsp. landra
EV565960       <-- TGAGCCAAAAAAAAAA-TCTCAGGGCCTCCTTCCTCTTCTACCACCCTTT  Raphanus raphanistrum subsp. landra
EV566284       <-- TGAGCCAAAAAAAAAA-TCTCAGGGCCTCCTTCCTCTTCTACCACCCTTT  Raphanus raphanistrum subsp. landra
FD947660       <-- TGAGCCAAAAAAAAAA--CTCAGAGCCTCCTTCCTCTTCTACCACCCTTT  Raphanus sativus cv Early Scarlet Globe
EY919514       --> TGAGCCAAAAAAAAAAATCTCAGAGCCTCCTTCCTCTTCTACCACCCTTT  Raphanus raphanistrum subsp. landra
FD943565       --> TGAGCCAAAAAAAAAA--CTCAGAGCCTCCTTCCTCTTCTACCACCCTTT  Raphanus sativus cv Early Scarlet Globe
FD575880       --> TGAGCCAAAAAAAAA---CTCAAAGCCTCCTTCCTCTTCTACCACCCTTT  Raphanus sativus cv Early Scarlet Globe
FD575914       --> TGAGCCAAAAAAAAA---CTCAGAGCCTCCTTCCTCTTCTACCACCCTTT  Raphanus sativus cv Early Scarlet Globe
EV571451       --> ..................................................  Raphanus raphanistrum subsp. landra

               201    -    251
UN16889        --> CGGCGGGTACTGTCCGTTGGGATGGGGGTAACATCCTCAATGCGGCCAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923762       <-- CGGCGGGTACTGTCCGTTGGGATCGGGGTAACATCCTCAATGCGGCCAAT  Raphanus raphanistrum subsp. landra
EV565960       <-- CGGCGGATACTGTCCGTTGGGATCGGGGTAACATCCTCAATGCGGCCAAT  Raphanus raphanistrum subsp. landra
EV566284       <-- CGGCGGATACTGTCCGTTGGGATCGGGGTAACATCCTCAATGCGGCCAAT  Raphanus raphanistrum subsp. landra
FD947660       <-- CGGCGGGTACTGTCCGTTGGGATGGGGGTAACATCCTCAATGCGGCCAAT  Raphanus sativus cv Early Scarlet Globe
EY919514       --> CGGCGGGTACTGTCCGTTGGGATCGGGGTAACATCCTCAATGCGGCCAAT  Raphanus raphanistrum subsp. landra
FD943565       --> CGGCGGGTACTGTCCGTTGGGATGGGGGTAACATCCTCAATGCGGCCAAT  Raphanus sativus cv Early Scarlet Globe
FD575880       --> CGGCGGGTACTGTCCGTTGGGATGGGGGTAACATCCTCAATGCGGCCAAT  Raphanus sativus cv Early Scarlet Globe
FD575914       --> CGGCGGGTACTGTCCGTTGGGATGGGGGTAACATCCTCAATGCGGCCAAT  Raphanus sativus cv Early Scarlet Globe
EV571451       --> ..................................................  Raphanus raphanistrum subsp. landra

               251    -    301
UN16889        --> CTTCATGCCAGAACGGGCAAGAGCTCTAAGAGCGGATTGAGCACCAGGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923762       <-- CTTCATGCCAGAACGGGCAAGAGCTCTAAGAGCGGATTGAGCACCAGGAC
EV565960       <-- CTTCATGCCAGAACGGGCAAGAGCTCTAAGAGCGGATTGAGCACCAGGAC
EV566284       <-- CTTCATGCCAGAACGGGCAAGAGCTCTAAGAGCGGATTGAGCACCAGGAC
FD947660       <-- CTTCATGCCAGAACGAGCAAGAGCTCTAAGAGCGGATTGAGCACCAGGAC
EY919514       --> CTTCATGCCAGAACGGGCAAGAGCTCTAAGAGCGGATTGAGCACCAGGAC
FD943565       --> CTTCATGCCAGAACGAGCAAGAGCTCTAAGAGCGGATTGAGCACCAGGAC
FD575880       --> CTTCATGCCAAAACGGGCAAGAGCTCTAAAAGCGGATTGAGCACCGGGAC
FD575914       --> CTTCATGCCAGAACGGGCAAGAGCTCTAAAAGCGGATTGAGCACCGGGAC
EV571451       --> .................................GGATTGAGCACCAGGAC

               301    -    351
UN16889        --> CAGGTGTCTTGGTCTTGTTTCCACCCGTGGCACGGAGCTTCACGTGCATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923762       <-- CAGGTGTCTTGGTCTTGTTTCCACCCGTGGCACGGAGCTTCACGTGCATA
EV565960       <-- CAGGTGTCTTGGTCTTGTTTCCACCCGTGGCACGGAGCTTCACGTGCATA
EV566284       <-- CAGGTGTCTTGGTCTTGTTTCCACCCGTGGCACGGAGCTTCACGTGCATA
FD947660       <-- CAGGTGTCTTGGTCTTGTTTCCACCCGTGGCACGGAGCTTCACGTGCATA
EY919514       --> CAGGTGTCTTGGTCTTGTTTCCACCCGTGGCACGGAGCTTCACGTGCATA
FD943565       --> CAGGTGTCTTGGTCTTGTTTCCACCCGTGGCACGGAGCTTCACGTGCATA
FD575880       --> CAGGTGTCTTGGTCTTGTTTCCACCCGTGGCACGGAGCTTCACGTGCATA
FD575914       --> CAGGTGTCTTGGTCTTGTTTCCACCCGTGGCACGGAGCTTCACGTGC...
EV571451       --> CAGGTGTCTTGGTCTTGTTTCCACCCGTGGCACGGAGCTTCACGTGCATA

               351    -    401
UN16889        --> GCGGTGATTCCAAGCTCCTTACAACGCTGAGCAACATCTTGAGCAGCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923762       <-- GCGGTGATTCCAAGCTCCTTACAACGCTGAGCAACATCTTGAGCAGCAAG  Raphanus raphanistrum subsp. landra
EV565960       <-- GCGGTGATTTCAAGCTCCTTACAACGCTGAGCAACATCTTGAGCAGCAAG  Raphanus raphanistrum subsp. landra
EV566284       <-- GCGGTGATTTCAAGCTCCTTACAACGCTGAGCAACATCTTGAGCAGCAAG  Raphanus raphanistrum subsp. landra
FD947660       <-- GCGGTGATTCCAAGCTCCTTGCAACGCTGAGCAACATCTTGAGCAGCAAG  Raphanus sativus cv Early Scarlet Globe
EY919514       --> GCGGTGATTCCAAGCTCCTTACAACGCTGAGCAACATCTTGAGCAGCAAG  Raphanus raphanistrum subsp. landra
FD943565       --> GCGGTGATTCCAAGCTCCTTGCAACGCTGAGCAACATCTTGAGCAGCAAG  Raphanus sativus cv Early Scarlet Globe
FD575880       --> GCGGTGATTCCAAGCTCCTTGCAACGCTGAGCAACATCTTGAGCAGCAAG  Raphanus sativus cv Early Scarlet Globe
FD575914       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV571451       --> GCGGTGATTTCAAGCTCCTTACAACGCTGAACAACATCTTGAGCAGCAAG  Raphanus raphanistrum subsp. landra

               401    -    451
UN16889        --> CATAGCTGCGTAAGGTGAGGACTCATCCCTGTCAGCTTTCACCTTCATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923762       <-- CATAGCTGCGTAAGGTGAGGACTCATCCCTGTCAGCTTTCACCTTCATCC  Raphanus raphanistrum subsp. landra
EV565960       <-- CATAGCTGCGTAAGGTGAGGACTCATCCCTGTCAGCTTTCACCTTCATCC  Raphanus raphanistrum subsp. landra
EV566284       <-- CATAGCTGCGTAAGGTGAGGACTCATCCCTGTCAGCTTTCACCTTCATCC  Raphanus raphanistrum subsp. landra
FD947660       <-- CATAGCTGCGTAAGGTGAGGACTCATCCCTGTCAGCTTTCACCTTCATTC  Raphanus sativus cv Early Scarlet Globe
EY919514       --> CATAGCTGCGTAAGGTGAGGACTCATCCCTGTCAGCTTTCACCTTCATCC  Raphanus raphanistrum subsp. landra
FD943565       --> CATAGCTGCGTAAGGTGAGGACTCATCCCTGTCAGCTTTCACCTTCATTC  Raphanus sativus cv Early Scarlet Globe
FD575880       --> CATAGCTGCGTAAGGTGAGGACTCATCCCTGTCAGCTTTCACCTTCATTC  Raphanus sativus cv Early Scarlet Globe
FD575914       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV571451       --> CATAGCTGCGTAAGGGGAGGACTCATCCCTGTCAGCTTTCACCTTCATCC  Raphanus raphanistrum subsp. landra

               451    -    501
UN16889        --> CACCAGTGATACGGACAAGGGTTTCACGTCCAGACAAATCAGTAACGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923762       <-- CACCAGTGATACGGACAAGGGTTTCACGTCCAGACAAATCAGTAACGTGA
EV565960       <-- CACCAGTGATACGGACAAGGGTTTCACGTCCAGACAAATAAGTAACGTGA
EV566284       <-- CACCAGTGATACGGACAAGGGTTTCACGTCCAGACAAATAAGTAACGTGA
FD947660       <-- CACCAGTGATACGGACAAGGGTTTCACGTCCAGc................
EY919514       --> CACCAGTGATACGGACAAGGGTTTCACGTCCAGACAAATCAGTAACGTGA
FD943565       --> CACCAGTGATACGGACAAGGGTTTCACGTCCAGc................
FD575880       --> CACCAGTGATACGGACAAGGGTTTCACGTCCAGACAAATCAGTAACGTGA
FD575914       --> ..................................................
EV571451       --> CACCAGTGATACGGACAAGGGTTTCACGTCCAGACAAATAAATAACGTGA

               501    -    551
UN16889        --> ATGAAAGTGTCGTTGAAGGAAGCGAAGATGTGGACAACACCGAACACTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923762       <-- ATGAAAGTGTCGTTGAAGGAAGCGAAGATGTGGACAACACCGAACACTTG
EV565960       <-- ATGAAAGTGTCGTTGAAGGAAGCGAAGATGTGGACAACACCGAACACTTG
EV566284       <-- ATGAAAGTGTCGTTGAAGGAAGCGAAGATGTGGA................
FD947660       <-- ..................................................
EY919514       --> ATGAAAGTGTCGTTGAAGGAAGCGAAGATGTGGACAACACCGAACACTTG
FD943565       --> ..................................................
FD575880       --> ATGAAAGTGTCGTTGAAGGAAGCGAAAATGTGGACAACACCGA.......
FD575914       --> ..................................................
EV571451       --> ATGAAAGTGTCGTTGAAGGAAGCGAAAATGTGGACAACACCGAACACTTG

               551    -    601
UN16889        --> TTCTCCATCACGAACAGCTGGCCCAAGAGTCACTGTCTCTTCCTTTGGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923762       <-- TTCTCCATCACGAACAGCTGGCCCAAGAGTCACTGTCTCTTCCTTTGGCT
EV565960       <-- TTCTCCATCACGAACAGCTGGCCCAAGAGTCACTGTCTCTTCCTTTGGCT
EV566284       <-- ..................................................
FD947660       <-- ..................................................
EY919514       --> TTCTCCATCACGAACAGCTGGCCCAAGAGTCACTGTCTCTTCCTTTGGCT
FD943565       --> ..................................................
FD575880       --> ..................................................
FD575914       --> ..................................................
EV571451       --> TTCTCCATCACGAACAGCTGGCCCAAGAATCACTGTCTCTTCCTTTGGCT

               601    -    651
UN16889        --> CTCTCGTCTTTCTCCTCGACATTTTTAGGGCAAGGAAAGGATGTGAAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923762       <-- CTCTCGTCTTTCTCCTCGACATTTTTAGGGCAAGGAAAGGATGTGAAAGA
EV565960       <-- CTCTCGTCTTTCTCCTCGACATTTTTAGGGCAAGGAAAGGATGTGAAAGA
EV566284       <-- ..................................................
FD947660       <-- ..................................................
EY919514       --> CTCTCGTCTTTCTCCTCGACATTTTTAGGGCAAGGAAAGGATGTGAAAGA
FD943565       --> ..................................................
FD575880       --> ..................................................
FD575914       --> ..................................................
EV571451       --> CTCTCGTCTTTCTCCTCGACATTTTTAGGGCAAGGAAAGGATGTGAAAGA

               651    -    701
UN16889        --> TCTTTCTTCTTCCTGTAGTTGCGCCGACGCAGAGATTTGGCAAGAGGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923762       <-- TCTTTCTTCTTCCTGTAGTTGCGCCGACGCAGAGATTTGGCAAGAGGGAG
EV565960       <-- TCTTTCTTCTTCCTGTAGTTGCGCCGACGCAGAGATTTGGCAAGAGGGAG
EV566284       <-- ..................................................
FD947660       <-- ..................................................
EY919514       --> TCTTTCTTCTTCCTGTAGTTGCGCCGACGCAGAGATTTGGCAAGAGGGAG
FD943565       --> ..................................................
FD575880       --> ..................................................
FD575914       --> ..................................................
EV571451       --> TCTTTCTTCTTCCTG...................................

               701    -    751
UN16889        --> AGCCCT
                   ~~~~~~
EY923762       <-- AGCCCT
EV565960       <-- AGCC..
EV566284       <-- ......
FD947660       <-- ......
EY919514       --> AGCCCT
FD943565       --> ......
FD575880       --> ......
FD575914       --> ......
EV571451       --> ......