1      -     51
UN16899        --> GGAAAGCCTATGGTATCCACCTTGGAACAGAGATGTGCAGAAAGATCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540192       <-- ..................................................
EX760226       <-- ..................................................
EX760714       <-- ..................................................
FD984825       <-- ..................................................
EY949785       --> GGAAAGCCTATGGTATCCACCTTGGAACAGAGATGTGCAGAAAGATCTTG
FD988981       --> ..................................................
FD940852       --> ..................................................
FD938554       --> ..................................................

               51     -    101
UN16899        --> GCTCATGGAACAAAGTCTCTTCATCTCTACACATTGAACATGGAGAAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540192       <-- ..................................................
EX760226       <-- ..................................................
EX760714       <-- ..................................................
FD984825       <-- ..................................................
EY949785       --> GCTCATGGAACAAAGTCTCTTCATCTCTACACATTGAACATGGAGAAATC
FD988981       --> ..................................................
FD940852       --> ..................................................
FD938554       --> ..................................................

               101    -    151
UN16899        --> AGCTCTTGCAATATTAATGAATCTTGGTATGATTGATGAGTCAAAAATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540192       <-- ..................................................
EX760226       <-- ..................................................
EX760714       <-- ..................................................
FD984825       <-- ..................................................
EY949785       --> AGCTCTTGCAATATTAATGAATCTTGGTATGATTGATGAGTCAAAAATCT
FD988981       --> ..................................................
FD940852       --> ..................................................
FD938554       --> ..................................................

               151    -    201
UN16899        --> CTCGGTCGTTGCCGTGGAGACGCCCAGCAAATGTTTTCCGTACTAAGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540192       <-- ..................................................
EX760226       <-- ..................................................
EX760714       <-- ..................................................
FD984825       <-- ..................................................
EY949785       --> CTCGGTCGTTGCCGTGGAGACGCCCAGCAAATGTTTTCCGTACTAAGGAA
FD988981       --> ..................................................
FD940852       --> ..................................................
FD938554       --> ..................................................

               201    -    251
UN16899        --> GATGTGCGTCCCATTTTCTGGGCAAATCGTCCGAAGAGCTACATTTCTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540192       <-- ..................................................
EX760226       <-- ..................................................
EX760714       <-- ..................................................
FD984825       <-- ..................................................
EY949785       --> GATGTGCGTCCCATTTTCTGGGCAAATCGTCCGAAGAGCTACATTTCTAG
FD988981       --> ..................................................
FD940852       --> ..................................................
FD938554       --> ..................................................

               251    -    301
UN16899        --> AACTAAGGGATGGGAGGACT-CCCACAAGGCCGGTGGGGTGATTCACGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540192       <-- AACCAAGGGATGGGAAGACT-CCCACAAGGCCGGTGGGGTGATTCACGCA
EX760226       <-- ..................................................
EX760714       <-- ..................................................
FD984825       <-- ..................................................
EY949785       --> AACTAAGGGATGGGAGGACTTCCCACAAGGCCGGTGGGGTGATTCACGCA
FD988981       --> ..................................................
FD940852       --> ..................................................
FD938554       --> ..................................................

               301    -    351
UN16899        --> GTGCTTCATATGGTGCACTCACGGATCATCAGTTCTCACGTCCACGAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540192       <-- GTGCCTCATATGGTGCACTCACGGATCATCAGTTCTCACGTCAACGAGCA
EX760226       <-- ......CATATGGTGCACTCACGGATCATCAGTTCTCACGTCCACGAGCA
EX760714       <-- ..................................................
FD984825       <-- ..................................................
EY949785       --> GTGCTTCATATGGTGCACTCTCGGATCATCAGTTCTCACGCCCACGAGCA
FD988981       --> ..................................................
FD940852       --> ..................................................
FD938554       --> ..................................................

               351    -    401
UN16899        --> CGTGACAAGAAGCTTCAACAAGAATGGGTTGTCCCATTGAAAAGCGTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540192       <-- CGTGACAAGAAGCTTCAACAAGAATGGGTTGTCCCATTGAAAAGCGTTGA
EX760226       <-- CGTGACAAGAAGCTTCAACAAGAATGGGTTGTCCCATTGAAAAGCGTTGA
EX760714       <-- ..................................................
FD984825       <-- ..................................................
EY949785       --> CGTGACAAGAAGCTTCAGCAAGAATGGGTTGTCCCATTAAAAAGCGTTGA
FD988981       --> ..................................................
FD940852       --> ..................................................
FD938554       --> ..................................................

               401    -    451
UN16899        --> AGATATTCAGGAGAAATTCAAGGAGCTCTGTCTTGGAAACTT-AAAAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540192       <-- AGATATCCAGGAGAAATTCAAGGAGCTCTGTCTTGGAAACTTGAAAAAGC
EX760226       <-- AGATATTCAGGAGAAATTCAAGGAGCTCTGTCTTGGAAACTT-AAAAAGC
EX760714       <-- ........AGGAGAAATTCAAGGAGCTCTGTCTTGGAAACTT-AAAAAGC
FD984825       <-- ..................................................
EY949785       --> AGATATTCAGGAGAAATTCAAGGAGCTCTGCCTTGGAAACTT-AAAAAGT
FD988981       --> ..................................................
FD940852       --> ..................................................
FD938554       --> ..................................................

               451    -    501
UN16899        --> AGTCCATGGTCTGAACTGGACGGACTCCAGCCAGAGACAAAGATCATAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540192       <-- AGTCCATGGTCTGAACTGGACGGGCTCCAGCCAGAGACAAAGATCATAAA
EX760226       <-- AGTCCATGGTCTGAACTGGACGGACTCCAGCCAGAGACAAAGATCATAAA
EX760714       <-- AGTCCATGGTCTGAACTGGACGGACTCCAGCCAGAGACAAAGATCATAAA
FD984825       <-- .......GGTCTGAACTGGATGGGCTCCAGCCAGAGACAAAGATCATAAA
EY949785       --> AGTCCATGGTCTGAACTGGACGGACTCCATCCTGAGACAAAGATCATAAA
FD988981       --> ..................................................
FD940852       --> ..................................................
FD938554       --> ..................................................

               501    -    551
UN16899        --> CGAGCAGCTGGTGAAAATCAACTCCAAAGGCTTCTTGACCATCAATAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540192       <-- CGAGCAGCTGGTGAAAATCAACTCCAAAGGCTTCTTGACCATCAATAGCC
EX760226       <-- CGAGCAGCTGGTGAAAATCAACTCCAAAGGCTTCTTGACCATCAATAGCC
EX760714       <-- CGAGCAGCTGGTGAAAATCAACTCCAAAGGCTTCTTGACCATCAATAGCC
FD984825       <-- CGAGCTGCTGGTGAACATCAACTCCAAAGGCTTCTTGTCCATCAATAGCC
EY949785       --> CGAGCAGCTGGTGAAAATCAACTCCAAAGGCTTCTTGACCATCAATAGCC
FD988981       --> ................ATCAACTCCAAAGGCTTCTTGTCCATCAATAGCC
FD940852       --> ..................................................
FD938554       --> ..................................................

               551    -    601
UN16899        --> AACCATCTGTCAACGCAGAGAGATCTGATTCCTCAACTGTTGGATGGGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540192       <-- AACCATCTGTCAACGCAGAGAGATCTGATTCCTCAACTGTTGGATGGGGT
EX760226       <-- AACCATCTGTCAACGCAGAGAGGTCTGATTCCTCAACTGTTGGATGGGGT
EX760714       <-- AACCATCTGTCAACGCAGAGAGATCTGATTCCTTAACTGTTGGATGGGGT
FD984825       <-- AACCATCTGTCAACGCAGAGAGATCTGATTCCTCAACTGTTGGATGGGGT
EY949785       --> AACCATCTGTCAACGCAGAGAGATCTGATTCCTCAACTGTTGGATGGGGT
FD988981       --> AACCATCTGTCAACGCAGAGAGATCTGATTCCTCAACTGTTGGATGGGGT
FD940852       --> ..................................................
FD938554       --> ..................................................

               601    -    651
UN16899        --> GGTCCTGGTGGATACGTATACCAAAAGGCTTACCTAGAGTTCTTCTGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540192       <-- GGTCCTGGTGGGTATGTATACCAAAAGGCTTACCTAGAGTTCTTCTGCTC
EX760226       <-- GGTCCTGGTGGATACGTATACCAAAAGGCTTACCTAGAGTTCTTCTGCTC
EX760714       <-- GGTCCTGGTGGATACGTATACCAAAAGGCTTACCTAGAGTTCTTCTGCTC
FD984825       <-- GGTCCTGGTGGATACGTATACCAAAAGGCTTACCTAGAGTTCTTCTGCTC
EY949785       --> GGTCCTGGTGGATACGTATACCAAAAGGCTTACCTAGAGTTCTTCTGCTC
FD988981       --> GGTCCTGGTGGATACGTATACCAAAAGGCTTACCTAGAGTTCTTCTGCTC
FD940852       --> ..................................................
FD938554       --> ..................................................

               651    -    701
UN16899        --> AAAGGAGAAGTTAGATGCAGTTGTTGAGAAATGCAAAGCTTTGCCATCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540192       <-- AAAGGAGAAGTTAGATGCAATTGTTGAGAAATGCAAAGCTTTGCCATCTA
EX760226       <-- AAAGGAGAAGTTAGATGCAGTTGTTGAGAAATGCAAAGCTTTGCCATCTA
EX760714       <-- AAAGGAGAAGTTAGATGCAGTTGTTGAGAAATGCAAAGCTTTGCCATCTA
FD984825       <-- AAGGGAGAAGTTAGATGCAGTTGTTGAGAAATGCAAAGCTTTGCCATCTA
EY949785       --> AAAGGAGAAGTTAGATGCAGTTGTTGAGAAATGCAAAGCT..........
FD988981       --> AAGGGAGAAGTTAGATGCAGTTGTTGAGAAATGCAAAGCTTTGCCATCTA
FD940852       --> .......................gTGAGAAATGCAAAGCTTTGCCATCTA
FD938554       --> ..................................................

               701    -    751
UN16899        --> TAACTTACATAGCTGTCAACAAAGGAGACAACTGGGTGTCAAACACTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540192       <-- TAACTTACATAGCTGTCAACAAAGGAGACAACTGGGTATCAAACACTGCT
EX760226       <-- TAACTTACATAGCTGTGGACAAAGGAGACAACTGGGTTTCAAACACTGCT
EX760714       <-- TAACTTACATAGCTGTGGACAAAGGAGACAACTGGGTGTCAAACACTGCT
FD984825       <-- TAACTTACATAGCTGTCAACAAAGGAGACAACTGGGTGTCAAACACTGCC
EY949785       --> ..................................................
FD988981       --> TAACTTACATAGCTGTCAACAAAGGAGACAACTGGGTGTCAAACACTGCC
FD940852       --> TAACTTACATAGCTGTCAACAAAGGAGACAGCTGGGTGTCAAACACTGCT
FD938554       --> ..................................................

               751    -    801
UN16899        --> CAATCCGATGTGAATGCTGTTACTTGGGGAGTTTTCCCGGCTAAGGAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540192       <-- CAGTCCGATGTGAATGCTGTTACTTGGGGAGTTTTCCCGGCTAAGGAGAT
EX760226       <-- CAATCCGATGTGAATGCTGTTACTTGGGGAGTTTTCCCGGCTAAGGAGAT
EX760714       <-- CAATCCGATGTGAATGCTGTTACTTGGGGAGTTTTCCCGGCTAAGGAGAT
FD984825       <-- CAATCCGATGTGAATGCTGTTACTTGGGGAGTTTTTTCGGCTAAGGAGAT
EY949785       --> ..................................................
FD988981       --> CAATCCGATGTGAATGCTGTTACTTGGGGAGTTTTCTCGGCTAAGGAGAT
FD940852       --> CAATCCGATGTGAATGCTGTTACTTGGGGAGTTTTCCCGGCTAAGGAGAT
FD938554       --> ............................GAGTTTTCCCGGCTAAGGAGAT

               801    -    851
UN16899        --> CATTCAACCAACCATTGTGGATCCGGCTAGCTTCAAAGTCTGGAAAGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540192       <-- CATTCAACCAACCATTGTGGATCCGGCTAGCTTAAAAGTCTGGAAAGATG
EX760226       <-- CATTCAACCAACCATTGTGGATCCGGCTAGCTTCAAAGTGTGGAAAGATG
EX760714       <-- CATTCAACCAACCATTGTGGATCCGGCTAGCTTCAAAGTGTGGAAAGATG
FD984825       <-- CATTCAACCAACCATTGTGGATCCGGCTAGCTTCAAAATCTGGAAAGATG
EY949785       --> ..................................................
FD988981       --> CATTCAACCAACCATTGTGGATCCGGCTAGCTTCAAAATCTGGAAAGATG
FD940852       --> CATTCAACCAACCATTGTGGATCCGGCTAGCTTCAAAGTCTGGAAAGATG
FD938554       --> CATTCAACCAACCATTGTGGATCCGGCTAGCTTCAAAGTCTGGAAAGATG

               851    -    901
UN16899        --> AAGCGTTTGAGACTTGGTCAAGAAGCTGGGCTAACTTGTACCCTGAATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540192       <-- AAGCGTTTGAGACTTGGTCAAGAAGCTGGGCTAACTTGTACCCTGAATCT
EX760226       <-- AAGCGTTTGAGACTTGGTCAAGAAGCTGGTCTAACTTGTACCCTGAATCT
EX760714       <-- AAGCGTTTGAGACTTGGTCAAGAAGCTGGTCTAACTTGTACCCTGAATCT
FD984825       <-- AAGCGTTTGAGACTTGGTCAAGAAGCTGGGCTAACTTGTACCCTc.....
EY949785       --> ..................................................
FD988981       --> AAGCGTTTGAGACTTGGTCAAGAAGCTGGGCTAACTTGTACCCTCAATCT
FD940852       --> AAGCGTTTGAGACTTGGTCAAGAAGCTGGGCTAACTTGTACCCTGAATCT
FD938554       --> AAGCGTTTGAGACTTGGTCAAGAAGCTGGGCTAACTTGTACCCTGAATCT

               901    -    951
UN16899        --> GACCCTTCAAGAAACTTGCTCGAAGAGGTTAAGAACAGTTACTATTTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540192       <-- GACCCTTCAAGAAACTTGCTCGAAGAGGTTAAG.................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760226       <-- GGCCCTTCAAGAAACTTGCTCGAAGAGGTTAAGAACAGTTACTATTTGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760714       <-- GACCCTTCAAGAAACTTGCTCGAAGAGGTTAAGAACAGTTACTATTTGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD984825       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY949785       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD988981       --> GACCCTTCAAGAAACTTGCTCGAAGAGGTCAAGAACAGTTACTATTTGGT  Raphanus raphanistrum subsp. landra
FD940852       --> GACCCTTCAAGAAACTTGCTCGAAGAGGTCAAGAACAGTTACTATTTGGT  Raphanus sativus var. oleiformis
FD938554       --> GACCCTTCAAGAAACTTGCTCGAAGAGGTCAAGAACAGTTACTATTTGGT  Raphanus sativus var. oleiformis

               951    -   1001
UN16899        --> GAGTTTGGTTGAGAATGATTACATCAACGGTAACATATTCACAGTCTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540192       <-- ..................................................
EX760226       <-- GAGTTTGGTTGAGAATGATTACATCAACGGTAACATATTCACAGTCTTTG
EX760714       <-- GAGTTTGGTTGAGAATGATTACATCAACGGTAACATATTCACAGTCTTTG
FD984825       <-- ..................................................
EY949785       --> ..................................................
FD988981       --> GAGTTTGGTTGAGAATGATTACATCAACGGTAACATATTCACAGTCTTTG
FD940852       --> GAGTTTGGTTGAGAATGATTACATCAACGGTAACATATTCACAGTCTTTA
FD938554       --> GAGTTTGGTTGAGAATGATTACATCAACGGTAACATATTCACAGTCTTTA

               1001   -   1051
UN16899        --> CTGATCTTTGAGAAGAACATCTGTTGTCCCACGGCTTTCATGATTTGGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540192       <-- ..................................................
EX760226       <-- CTGATCTTTGAGAAGAACATCTGTTGTCCCACGGCTTTCATGATTTGGCT
EX760714       <-- CTGATCTTTGAGAAGAACATCTGTTGTCCCACGGCTTTCATGATTTGGCT
FD984825       <-- ..................................................
EY949785       --> ..................................................
FD988981       --> GTGATCTTTGAGAAGAACATCTGT-GTCCCACGGCTTTCATGATTTGGCT
FD940852       --> CTGATCTTTGAGAAGAACATATGTTGTCCCACGGCTTTCATGATTTGGCT
FD938554       --> CTGATCTTTGAGAAGAACATATGTTGTCCCACGGCTTTCATGATTTGGCT

               1051   -   1101
UN16899        --> TTTGTAATGTCTCTTAAAATATTGGGAATATAGTTTTATATACATCATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540192       <-- ..................................................
EX760226       <-- TTTGCAATGTCTCTTAAAATATTGGGAATATGGTTTTATATACATCATGT
EX760714       <-- TTTGCAAT..........................................
FD984825       <-- ..................................................
EY949785       --> ..................................................
FD988981       --> TTTGTAATGTCTCTTAAAATATTGGGAATATAGTTTTATATACATCATGT
FD940852       --> TTTGTAATGTCTCTTAAAATATTGGGAATATAGTTTTATATACATCATGT
FD938554       --> TTTGTAATGTCTCTTAAAATATTGGGAATATAGCTTTATATACATCATGT

               1101   -   1151
UN16899        --> TGTCATCATTATCATGTTGATTTGCCAATAAAGTTTGTATTGTTAAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540192       <-- ..................................................
EX760226       <-- TGTCATC...........................................
EX760714       <-- ..................................................
FD984825       <-- ..................................................
EY949785       --> ..................................................
FD988981       --> TGTCATCATTATCATGTTGATTTGCCAATAAAGTTTGTATTGTTAAAGAA
FD940852       --> TGTCATCATTATCATGTTGATTTGCCAATAAAGTTTGTATTGTTAAAGAA
FD938554       --> TGTCATCATTATCATGTTGATTTGCCAATAAAGTTTGTATTGTTAAAGAA

               1151   -   1201
UN16899        --> AGCATCTTTCTCCCTACCTATGTGACACAAAAGTTGCCTGAAACAAAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540192       <-- ..................................................
EX760226       <-- ..................................................
EX760714       <-- ..................................................
FD984825       <-- ..................................................
EY949785       --> ..................................................
FD988981       --> AGCATCTGTCTCCCTACCTATGTGACACAAAAGTT...............
FD940852       --> AGCATCTTTCTCCCTACCTATGTGACACAAAAGTTGCCTGAAACAAAGTT
FD938554       --> AGCATCTTT.........................................

               1201   -   1251
UN16899        --> TTCATTAG
                   ~~~~~~~~
EV540192       <-- ........
EX760226       <-- ........
EX760714       <-- ........
FD984825       <-- ........
EY949785       --> ........
FD988981       --> ........
FD940852       --> TTCATTAG
FD938554       --> ........