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Alignment for radish unigene UN16908

               1      -     51
UN16908        --> AAAACTCCCGCTCGGTCGAGCGGGTCATGTTCTAGTTTAGTATTATATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921214       <-- ..................................................
EX762366       <-- ..................................................
FD543829       <-- ..................................................
EX886680       <-- ..................................................
FD561859       <-- ..................................................
FD577007       <-- ..................................................
FD559806       <-- ..................................................
EY948339       <-- ..................................................
FD965190       <-- ..................................................
HS106830       <-- ..................................................
EY939188       <-- ..................................................
FD972551       <-- ..................................................
FD565906       --> AAAACTCCCGCTCGGTCGAGCGGGTCATGTTCTAGTTTAGTATTATATAA
FD581392       --> ..................................................
EW736462       --> ..................................................
FY439390       --> ..................................................
EW721229       --> ..................................................
EX775647       --> ..................................................
EY942514       --> ..................................................
FD539581       --> ..................................................

               51     -    101
UN16908        --> CAAACCATAAAATTATTACATCAACTATTACATAAATGAAAAGACAAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921214       <-- ..................................................
EX762366       <-- ..................................................
FD543829       <-- ..................................................
EX886680       <-- ..................................................
FD561859       <-- ..................................................
FD577007       <-- ..................................................
FD559806       <-- ..................................................
EY948339       <-- ..................................................
FD965190       <-- ..................................................
HS106830       <-- ..................................................
EY939188       <-- ..................................................
FD972551       <-- ..................................................
FD565906       --> CAAACCATAAAATTATTACATCAACTATTACATAAATGAAAAGACAAATA
FD581392       --> ..........AATTATTACATCAACTATTACATAAATGAAAAGACAAATA
EW736462       --> ..................................................
FY439390       --> ..................................................
EW721229       --> ..................................................
EX775647       --> ..................................................
EY942514       --> ..................................................
FD539581       --> ..................................................

               101    -    151
UN16908        --> CTTGGACCAAGTTGACCATTACAAAACCACAACACAAGGCACTGCTACTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921214       <-- ..................................................
EX762366       <-- ..................................................
FD543829       <-- ..................................................
EX886680       <-- ..................................................
FD561859       <-- ..................................................
FD577007       <-- ..................................................
FD559806       <-- ..................................................
EY948339       <-- ..................................................
FD965190       <-- ..................................................
HS106830       <-- ..................................................
EY939188       <-- ..................................................
FD972551       <-- ..................................................
FD565906       --> CTTGGACCAAGTTGACCATTACAAAACCACAACACAAGGCACTGCTACTA
FD581392       --> CTTGGACCAAGTTGACCATTACAAAACCACAACACAAGACACTGCTACTA
EW736462       --> ..................................................
FY439390       --> ..................................................
EW721229       --> ..................................................
EX775647       --> ..................................................
EY942514       --> ..................................................
FD539581       --> ..................................................

               151    -    201
UN16908        --> CCTCCCTCTCAGACAAACATGTCTAGACCCCAGGAAATTTGGAACCCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921214       <-- ............caacACATGTCTAGACCCAA--GAATTTG-AACCCAAA
EX762366       <-- ..................................................
FD543829       <-- ..................................................
EX886680       <-- ..................................................
FD561859       <-- ..................................................
FD577007       <-- ..................................................
FD559806       <-- ..................................................
EY948339       <-- ..................................................
FD965190       <-- ..................................................
HS106830       <-- ..................................................
EY939188       <-- ..................................................
FD972551       <-- ..................................................
FD565906       --> CCTCCCTCTCAGACAAACATGTCTAGACCCCAGGAAATTTGGAACCCAAA
FD581392       --> CCTCCCTCTCAAACAAACATGTCTAGACCCCAGGAAATTTGGAACCCAAA
EW736462       --> ........................................GGAACCCAAA
FY439390       --> ...........................................ggaccAA
EW721229       --> ..................................................
EX775647       --> ..................................................
EY942514       --> ..................................................
FD539581       --> ..................................................

               201    -    251
UN16908        --> CCCAACCCCCTTTTATTTCAACGTTATTTTATTGCTTGGCATACAAGCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921214       <-- CCCAACCCCCTTT-ATT-CAACGTTATTT-ATTGCTTGGCATACAAGCCA
EX762366       <-- ..............................ATTGCTTGGCATACAAGCCA
FD543829       <-- ..................................................
EX886680       <-- ..................................................
FD561859       <-- ..................................................
FD577007       <-- ..................................................
FD559806       <-- ..................................................
EY948339       <-- ..................................................
FD965190       <-- ..................................................
HS106830       <-- ..................................................
EY939188       <-- ..................................................
FD972551       <-- ..................................................
FD565906       --> CCCAACCCCCTTTTATTTCAACGTTATTTTATTGCTTGGCATACAAGCCA
FD581392       --> CCCAACCCCCTTTTATTTCAACGTTATTTTATTGCTTGGCATACAAGCCA
EW736462       --> CCCAACCCCCTTTTATTTCAACGTTATTTTATTGCTTGGCATACAAGCCA
FY439390       --> CCC-ACCCCCTTTTATTTCAACGTTATTTTATTGCTTGGCATACAAGCCA
EW721229       --> ..................CAACGTTATTTTATTGCTTGGCATACAAGCCA
EX775647       --> ..................CAACGTTATTTTATTGCTTGGCATACAAGCCA
EY942514       --> ..................CAACGTTATTTTATTGCTTGGCATACAAGCCA
FD539581       --> ..................................................

               251    -    301
UN16908        --> AGGAAGACTCATAGGTTACAAACCAAGAAGCATACATATAGAATCAACGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921214       <-- AGTAAGACTCATAGGTTACAAACCAAGAAGCATACATATAGAATCAACGA
EX762366       <-- AGTAAGACTCATAGGTTACAAACCAAGAAGCATACATATAGAATCAACGA
FD543829       <-- ..................................................
EX886680       <-- ..................................................
FD561859       <-- ..................................................
FD577007       <-- ..................................................
FD559806       <-- ..................................................
EY948339       <-- ..................................................
FD965190       <-- ..................................................
HS106830       <-- ..................................................
EY939188       <-- ..................................................
FD972551       <-- ..................................................
FD565906       --> AGGAAGACTCATAGGTTACAAACCAAGAAGCATACATATAGAATCAACGA
FD581392       --> AGGAAGACTCATAGGTTACAAACCAAGAAGCATACATATAGAATCAACGA
EW736462       --> AGGAAGACTCATAGGTTACAAACCAAGAAGCATACATATAGAATCAACGA
FY439390       --> AGGAAGACTCATAGGTTACAAACCAAGAAGCATACATATAGAATCAACGA
EW721229       --> AGGAAGACTCATAGGTTACAAACCAAGAAGCATACATATAGAATCAACGA
EX775647       --> AGTAAGACTCATAGGTTACAAACCAAGAAGCATACATATAGAATCAACGA
EY942514       --> AGGAAGACTCATAGGTTACAAACCAAGAAGCATACATATAGAATCAACGA
FD539581       --> ................cACAAACCAAGAAGCATACATATAGAATCAACGA

               301    -    351
UN16908        --> CTTCAAATGAGAGACACACATACATAAGAGACTCTGAACAAGGTCTAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921214       <-- CTTCAAATGAGACACACACATACATAAGAGACTCTGAACAAGGTCTAGAA
EX762366       <-- CTTCAAATGAGAGACACACATACATAAGAGACTCTGAACAAGGTCTAGAA
FD543829       <-- ...........................................TCTAGAA
EX886680       <-- .............................................TAGAA
FD561859       <-- ................................................gA
FD577007       <-- .................................................A
FD559806       <-- ..................................................
EY948339       <-- ..................................................
FD965190       <-- ..................................................
HS106830       <-- ..................................................
EY939188       <-- ..................................................
FD972551       <-- ..................................................
FD565906       --> CTTCAAATGAGAGACACACATACATAAGAGACTCTGAACAAGGTCTAGAA
FD581392       --> CTTCAAATGAGAGACACACATACATAAGAGACTCTGAACAAGGTCTAGAA
EW736462       --> CTTCAAATGAGAGACACACATACATAAGAGACTCTGAACAAGGTCTAGAA
FY439390       --> CTTCAAATGAGAGACACACATACATAAGAGACTCTGAACAAGGTCTAGAA
EW721229       --> CTTCAAATGAGAGACACACATACATAAGAGACTCTGAACAAGGTCTAGAA
EX775647       --> CTTCAAATGAGACACACACATACATAAGAGACTCTGAACAAGGTCTAGAA
EY942514       --> CTTCAAATGAGAGACACACATACATAAGAGACTCTGAACAAGGTCTAGAA
FD539581       --> CTTCAAATGAGAGACACACATACATAAGAGACTCTGAACAAGGTCTAGAA

               351    -    401
UN16908        --> AAA-GAAAACAAGAAAGTGATAAAATTAAGAAGGAAAAAAGAAGAAGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921214       <-- AAA-GAAAACAAGAAAGTGATGAAATTAAGAAGGAAA----AAAAAGGAG  Raphanus raphanistrum subsp. landra
EX762366       <-- AAA-GGAAACAAGAAAGTGATAAAATTAAGAAGGAAA----AAAAAGGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD543829       <-- AAA-GAAAACAAGAAAGTGATAAAATTAAGAAAGAAGAA--AA-AAGGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX886680       <-- AAA-GAAAACAAGAAAGTGATAAAATTAAGAAGGAAAAA-GAAGAAGGAG  Raphanus sativus var. oleiformis
FD561859       <-- AAA-GAAA-C-AGAAAGTGATAAA-TTAAGAAGGAAAAA-GAAGAAGGAG  Raphanus sativus var. oleiformis
FD577007       <-- AAA-GAAAACAAGAAAGTGATAAAATTAAGAAGGAAAAAAGAAGAAGGAG  Raphanus sativus cv Rat-Tail Radish #3870
FD559806       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY948339       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD965190       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
HS106830       <-- ..................................................  Raphanus sativus var. niger
EY939188       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD972551       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD565906       --> AAA-GAAAACAAGAAAGTGATAAAATTAAGAAGGAAAAAAGAAGAAGGAG  Raphanus sativus var. oleiformis
FD581392       --> AAA-GAAAACAAGAAAGTGATAAAATTAAGAAGGAAAAAAGAAGAAGGAG  Raphanus sativus cv Rat-Tail Radish #3870
EW736462       --> AAA-GAAAACAAGAAAGTGATAAAATTAAGAAGGAAAAAAGAAGAAGGAG  Raphanus sativus cv Rat-Tail Radish #3870
FY439390       --> AAA-GAAAACAAGAAAGTGATAAAATTAAGAAGGAAAAAAGAAGAAGGAG  Raphanus sativus cv GSK3-1
EW721229       --> AAA-GAAAACAAGAAAGTGATAAAATTAAGAAGGAAAAAAGAAGAAGGAG  Raphanus sativus var. oleiformis
EX775647       --> AAA-GAAAACAAGAAAGTGATGAAATTAAGAAGGAAAAAA--A-AAGGAG  Raphanus raphanistrum subsp. landra
EY942514       --> AAA-GAAAACAAGAAAGTGATAAAATTAAGAAGGAAAAAAGAAGAAGGAG  Raphanus sativus cv Rat-Tail Radish #3870
FD539581       --> AAAAGAAAACAAGAAAGTGATAAAATTAAAAAAGAAGAAA-AA-AAGGAG  Raphanus raphanistrum subsp. raphanistrum (MS)

               401    -    451
UN16908        --> AAAAGGTATCTTAGCGCTAAGACACCAAGAGTTTATTACTGATAGTACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921214       <-- AAAAGGTATCTTAGCGCCAAGACACCAAGAGTTTATTACTGATAGTACAT  Raphanus raphanistrum subsp. landra
EX762366       <-- AAAAGGTATCTTAGCGCCAAGACACCAAGAGTTTATTACTGATAGTACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD543829       <-- AAAAGGTATCTTAGCGCCAAGACACCAAGAGTTTATTACTGATAGTACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX886680       <-- AAAAGGTATCTTAGCGCTAAGACACCAAGAGTTTATTACTGATAGTACAT  Raphanus sativus var. oleiformis
FD561859       <-- AAAAGGTATCTTAGCGCTAAGACACCAAGAGTTTATTACTGATAGTACAT  Raphanus sativus var. oleiformis
FD577007       <-- AAAAGGTATCTTAGCGCTAAGACACCAAGAGTTTATTACTGATAGTACAT  Raphanus sativus cv Rat-Tail Radish #3870
FD559806       <-- ........TCTTAGCGCCAAAGCATCAAGAGTTTATTACTGATAGTACAT  Raphanus raphanistrum subsp. landra
EY948339       <-- ..................AAGACACCAAGAGTTTATTACTGATAGTACAT  Raphanus sativus cv Rat-Tail Radish #3870
FD965190       <-- ..............cgccaaagCACCAAGAGTTTATTACTGATAGTACAT  Raphanus raphanistrum subsp. maritimus
HS106830       <-- ..................................................  Raphanus sativus var. niger
EY939188       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD972551       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD565906       --> AAAAGGTATCTTAGCGCTAAGACACCAAGAGTTTATTACTGATAGTACAT  Raphanus sativus var. oleiformis
FD581392       --> AAAAGGTATCTTAGCGCTAAGACACCAAGAGTTTATTACTGATAGTACAT  Raphanus sativus cv Rat-Tail Radish #3870
EW736462       --> AAAAGGTATCTTAGCGCTAAGACACCAAGAGTTTGTTACTGATAGTACAT  Raphanus sativus cv Rat-Tail Radish #3870
FY439390       --> AAAAGGTATCTTAGCGCTAAGACACCAAGAGTTTATTACTGATAGTACAT  Raphanus sativus cv GSK3-1
EW721229       --> AAAAGGTATCTTAGCGCTAAGACACCAAGAGTTTATTACTGATAGTACAT  Raphanus sativus var. oleiformis
EX775647       --> AAAAGGTATCTTAGCGCCAAGACACCAAGAGTTTATTACTGATAGTACAT  Raphanus raphanistrum subsp. landra
EY942514       --> AAAAGGTATCTTAGCGCTAAGACACCAAGAGTTTATTACTGATAGTACAT  Raphanus sativus cv Rat-Tail Radish #3870
FD539581       --> AAAAGGTATCTTAGCGCCAAGACACCAAGAGTTTATTACTGATAGTACAT  Raphanus raphanistrum subsp. raphanistrum (MS)

               451    -    501
UN16908        --> GAGCTGCTGATGCGCCGCAGCTACATTCTGAAAACCACCATCGTACATAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921214       <-- GAGCTGCTGATGCGCCGCAGCTACATTCTGAAAACCACCATCGTACATAG
EX762366       <-- GAGCTGCTGATGCGCCGCAGCTACATTCTGAAAACCACCATCGTACATAG
FD543829       <-- GAGCTGCTGATGCGCCGCAGCTACATTCTGGAAACCACCATCGTACATAG
EX886680       <-- GAGCTGCTGATGCGCCGCAGCTACATTCTGAAAACCACCATCGTACATAG
FD561859       <-- GAGCTGCTGATGCGCCGCAGCTACATTCTGAAAACCACCATCGTACATAG
FD577007       <-- GAGCTGCTGATGCGCCGCAGCTACATTCTGAAAACCACCATCGTACATAG
FD559806       <-- GAGCGGCTGATGCGCCGCAGCTACATTCTGAAAACCACCATCGTACATAG
EY948339       <-- GAGCTGCTGATGCGCCGCAGCTACATTCTGAAAACCACCATCGTACATAG
FD965190       <-- GAGCTGCTGATGCGCCGCAGCTACATTCTGAAAACCGCCATCGTACATAG
HS106830       <-- ...........................................TACATAG
EY939188       <-- ..................................................
FD972551       <-- ..................................................
FD565906       --> GAGCTGCTGATGCGCCGCAGCTACATTCTGAAAACCACCATCGTACATAG
FD581392       --> GAGCTGCTGATGCGCCGCAGCTACATTCTGAAAACCACCATCGTACATAG
EW736462       --> GAGCTGCTGATGCGCCGCAGCTACATTCTGAAAACCACCATCGTACATAG
FY439390       --> GAGCTGCTGATGCGCCGCAGCTACATTCTGAAAACCACCATCGTACATAG
EW721229       --> GAGCTGCTGATGCGCCGCAGCTACATTCTGAAAACCACCATCGTACATAG
EX775647       --> GAGCTGCTGATGCGCCGCAGCTACATTCTGAAAACCACCATCGTACATAG
EY942514       --> GAGCTGCTGATGCGCCGCAGCTACATTCTGAAAACCACCATCGTACATAG
FD539581       --> GAGCTGCTGATGCGCCGCAGCTACATTCTGGAAACCACCATCGTACATAG

               501    -    551
UN16908        --> CCGCTGCACTTGCCCCAGCTGCATTGACATGCCTTAGAGAATGCTGAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921214       <-- CTGCTGCACTTGCTCCAGCTGCATTGACATGCCTTAGAGAATGCTGAGCC  Raphanus raphanistrum subsp. landra
EX762366       <-- CCGCTGCACTTGCTCCAGCTGCATTGACATGCCTTAGAGAATGCTGAGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD543829       <-- CTGCTGCACTTGCTCCAGCTGCATTGACATGCCTTAGAGAATGCTGAGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX886680       <-- CCGCTGCACTTGCCCCAGCTGCATTGACATGCCTTAGAGAATGCTGAGCC  Raphanus sativus var. oleiformis
FD561859       <-- CCGCTGCACTTGCCCCAGCTGCATTGACATGCCTTAGAGAATGCTGAGCC  Raphanus sativus var. oleiformis
FD577007       <-- CCGATGCACTTGCCCCAGCTGCATTGGCATGCCTTAGAGAATGCTGAGCC  Raphanus sativus cv Rat-Tail Radish #3870
FD559806       <-- CCGCTGCACTTGCTCCAGCTGCATTGACATGCCTTAGAGAATGCTGAGCC  Raphanus raphanistrum subsp. landra
EY948339       <-- CCGCTGCACTTGCCCCAGCTGCATTGACATGCCTTAGAGAATGCTGAGCC  Raphanus sativus cv Rat-Tail Radish #3870
FD965190       <-- CCGCTGCACTTGCTCCAGCTGCATTGACATGCCTTAGAGAATGCTGAGCC  Raphanus raphanistrum subsp. maritimus
HS106830       <-- CCGCTGCACTTGCCCCAGCTGCATTGACATGCCTTAGAGAATGCTGAGCC  Raphanus sativus var. niger
EY939188       <-- ...CTGCACT-GCTCCAGCTGCAT-GACATGC-TTAGAGAATGCTGAGC-  Raphanus sativus cv Early Scarlet Globe
FD972551       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD565906       --> CCGCTGCACTTGCCCCAGCTGCATTGACATGCCTTAGAGAATGCTGAGCC  Raphanus sativus var. oleiformis
FD581392       --> CCGATGCACTTGCCCCAGCTGCATTGGCATGCCTT...............  Raphanus sativus cv Rat-Tail Radish #3870
EW736462       --> CCGCTGCACTTGCCCCAGCTGCATTGACATGCCTTAAAGAATGCTGAGCC  Raphanus sativus cv Rat-Tail Radish #3870
FY439390       --> CCGCTGCACTTGCCCCAGCTGCATTGACATGCCTTAGAGAATGCTGAGCC  Raphanus sativus cv GSK3-1
EW721229       --> CCGCTGCACTTGCCCCAGCTGCATTGACATGCCTTAAAGAATGCTGAGCC  Raphanus sativus var. oleiformis
EX775647       --> CTGCTGCACTTGCTCCAGCTGCATTGACATGCCTTAAAGAATGCTGAGCC  Raphanus raphanistrum subsp. landra
EY942514       --> CCGCTGCACTTGCCCCAGCTGCATTGACATGCCTTAAAGAATGCTGAGCC  Raphanus sativus cv Rat-Tail Radish #3870
FD539581       --> CTGCTGCACTTGCTCCAGCTGCATTGACATGCCTTAAAGAATGCTGAGCC  Raphanus raphanistrum subsp. raphanistrum (MS)

               551    -    601
UN16908        --> TGAGGGTGCATCTTGGCTAAAGCCAGTTGCCTCTCATAGGCTAAAAGGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921214       <-- TGAGGGTGCATCTTGGCTAAAGCCAGTTGTCTCTCATAGGCTAAAAGGTC
EX762366       <-- TGAGGATGCATCTTGGCTAAAGCCAGTTGCCTCTCATAGGCTAAAAGGTC
FD543829       <-- TGAGGGTGCATCTTGGCTAAAGCCAATTGCCTCTCATAGGCTAAAAGGTC
EX886680       <-- TGAGGGTGCATCTTGGCTAAAGCCAGTTGCCTCTCATAGGCTAAAAGGTC
FD561859       <-- TGAGGGTGCATCTTGGCTAAAGCCAGTTGCCTCTCATAGGCTAAAAGGTC
FD577007       <-- TGAGGGTGCATCTTGGCTAAAGCCAGTTGCCTCTCATAGGCTAAAAGGTC
FD559806       <-- TGAGGGTGCATCTTGGCTAAAGCCAGTTGCCTCTCATAGGCTAAAAGGTC
EY948339       <-- TGAGGGTGCATCTTGGCTAAAGCCAGTTGCCTCTCATAGGCTAAAAGGTC
FD965190       <-- TGAGGGTGCATCTTGGCTAAAGCCAGTTGCCTCTCATAGGCTAAAAGGTC
HS106830       <-- TGAGGGTGCATCTTGGCTAAAGCCAGTTGCCTCTCATAGGCTAAAAGGTC
EY939188       <-- TGAGGGTGCATCT-GGCTAAAGCCAGT-GCCTCTCATAGGCTAAAAGGTC
FD972551       <-- ..................................................
FD565906       --> TGAGGGTGCATCTTGGCTAAAGCCAGTTGCCTCTCATAGGCTAAAAGGTC
FD581392       --> ..................................................
EW736462       --> TGAGGGTGCATCTTGGCTAAAGCCAGTTGCCTCTCATAGGCTAAAAGGTC
FY439390       --> TGAGGGTGCATCTTGGCTAAAGCCAGTTGCCTCTCATAGGCTAAAAGGTC
EW721229       --> TGAGGGTGCATCTTGGCTAAAGCCAGTTGCCTCTCATAGGCTAAAAGGTC
EX775647       --> TGAGGGTGCATCTTGGCTAAAGCCAGTTGTCTCTCATAGGCTAAAAGGTC
EY942514       --> TGAGGGTGCATCTTGGCTAAAGCCAGTTGCCTCTCATAGGCTAAAAGGTC
FD539581       --> TGAGGGTGCATCTTGGCTAAAGCCAATTGCCTCTCATAGGCTAAAAGGTC

               601    -    651
UN16908        --> CATTGGGGACAGACCAGGGACTGCCACTGGCACTGGTGGCGGAAGCGGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921214       <-- CATTGGGGACAGACCAGGGACTGCCACTGGCACTGGTGGCGGAAGCGGGT  Raphanus raphanistrum subsp. landra
EX762366       <-- CATTGGGGACAGACCAGGGACTGCCACTGGCACTGGTGGTGGAAGCGGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD543829       <-- CATTGGGGACAGACCAGGGACTGCCACTGGCACTGGTGGTGGAAGCGGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX886680       <-- CATTGGGGACAGACCAGGGACTGCCACTGGCACTGGTGGCGGAAGCGGGT  Raphanus sativus var. oleiformis
FD561859       <-- CATTGGGGACAGACCAGGGACTGCCACTGGCACTGGTGGCGGAAGCGGGT  Raphanus sativus var. oleiformis
FD577007       <-- CATTGGGGACAGACCAGGGACTGCCACTGGCACTGGTGGCGGAAGCGGGT  Raphanus sativus cv Rat-Tail Radish #3870
FD559806       <-- CATTGGGGACAGACCAGGGACTGCCACTGGCACTGGTGGTGGAAGCGGGT  Raphanus raphanistrum subsp. landra
EY948339       <-- CATTGGGGACAGACCAGGGACTGCCACTGGCAGTGGTGGCGGAAGCGGGT  Raphanus sativus cv Rat-Tail Radish #3870
FD965190       <-- CATTGGGGACAGACCAGGGACTGCCACTGGCACTGGTGGTGGAAGCGGGT  Raphanus raphanistrum subsp. maritimus
HS106830       <-- CATTGGGGACAGACCAGGGACTGCCACTGGCACTGGTGGCGGAAGCGGGT  Raphanus sativus var. niger
EY939188       <-- CATTGGG-ACAGACCAGGGACTGCCACTGGCACTGGTGGTGGAAGCGGGT  Raphanus sativus cv Early Scarlet Globe
FD972551       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD565906       --> CATTGGGGACAGACCAGGGACTGCCACTGGCACTGGTGGCGGAAGCGGGT  Raphanus sativus var. oleiformis
FD581392       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW736462       --> CATTGGGGACAGACCAGGGACTGCCACTGGCACTGGTGGCGGAAGCGGGT  Raphanus sativus cv Rat-Tail Radish #3870
FY439390       --> CATTGGGGACAGACCAGGGACTGCCACTGGCACTGGTGGCGGAAGCGGGT  Raphanus sativus cv GSK3-1
EW721229       --> CATTGGGGACAGACCAGGGACTGCCACTGGCACTGGTGGCGGAAGCGGGT  Raphanus sativus var. oleiformis
EX775647       --> CATTGGGGACAGACCAGGGACTGCCACTGGCACTGGTGGCGGAAGCGGGT  Raphanus raphanistrum subsp. landra
EY942514       --> CATTGGGGACAGACCAGGGACTGCCACTGGCACTGGTGGCGGAAGCGGGT  Raphanus sativus cv Rat-Tail Radish #3870
FD539581       --> CATTGGGGACAGACCAGGGACTGCCACTGGCACTGGTGGTGGAAGCGGGT  Raphanus raphanistrum subsp. raphanistrum (MS)

               651    -    701
UN16908        --> TTGAGGCTGTCCCTATTGGAGTTGGCTTGTTTCCCCATGAACACTTTATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921214       <-- TTGAGGCTGTGCCTATTGGAGTTGGCTTGTTTCCCCATGAACACTTTATC  Raphanus raphanistrum subsp. landra
EX762366       <-- TTGAAGCTGTGCCTATTGGAGTTGGCTTGTTTCCCCATGAACACTTTATC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD543829       <-- TTGAAGCTGTGCCTATTGGAGTTGGCTTGTTTCCCCATGAACACTTTATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX886680       <-- TTGAGGCTGTCCCTATTGGAGTTGGCTTGTTTCCCCATGAGCACTTTATC  Raphanus sativus var. oleiformis
FD561859       <-- TTGAGGCTGTCCCTATTGGAGTTGGCTTGTTTCCCCATGAACACTTTATC  Raphanus sativus var. oleiformis
FD577007       <-- TTGAGGCTGTCCCTATTGGAGTTGGCTTGTTTCCCCATGAACACTTTATC  Raphanus sativus cv Rat-Tail Radish #3870
FD559806       <-- TTGAAGCTGTGCCTATTGGAGTTGGCTTGTTTCCCCATGAACACTTTATC  Raphanus raphanistrum subsp. landra
EY948339       <-- TTGAGGCTGTCCATATTGGAGTTGGCTTGTTTCCCCATGAACACTTTATC  Raphanus sativus cv Rat-Tail Radish #3870
FD965190       <-- TTGAAGCTGTGCCTATTGGAGTTGGCTTGTTTCCCCATGAACACTTTATC  Raphanus raphanistrum subsp. maritimus
HS106830       <-- TTGAGGCTGTCCCTATTGGAGTTGGCTTGTTTCCCCATGAACACTTTATC  Raphanus sativus var. niger
EY939188       <-- TTGAGGCTGTCCCTATAGGAGTTGGTTTGTTTCCCCATGAACACTTTATC  Raphanus sativus cv Early Scarlet Globe
FD972551       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD565906       --> TTGAGGCTGTCCCTATTGGAGTTGGCTTGTTTCCCCATGAACACTTTATC  Raphanus sativus var. oleiformis
FD581392       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW736462       --> TTGAGGCTGTCCCTATTGGAGTTGGCTTGTTTCCCCATGAACACTTTATC  Raphanus sativus cv Rat-Tail Radish #3870
FY439390       --> TTGAGGCTGTCCCTATTGGAGTTGGCTTGTTTCCCCATGAACACTTTATC  Raphanus sativus cv GSK3-1
EW721229       --> TTGAGGCTGTCCCTATTGGAGTTGGCTTGTTTCCCCATGAACACTTTATC  Raphanus sativus var. oleiformis
EX775647       --> TTGAGGCTGTGCCTATTGGAGTTGGCTTGTTTCCCCATGAACACTTTATC  Raphanus raphanistrum subsp. landra
EY942514       --> TTGAGGCTGCCCCTATTGGAGTTGGCTTGTTTCCCCATGAACACTTTATC  Raphanus sativus cv Rat-Tail Radish #3870
FD539581       --> TTGAAGCTGTGCCTATTGGAGTTGGCTTGTTTCCCCATGAACACTTTATC  Raphanus raphanistrum subsp. raphanistrum (MS)

               701    -    751
UN16908        --> TGTCTGTTAAAGAGGAAAGGCTGAGAGTTGCCCATTTGAATAGCAAGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921214       <-- TGTCTGTTAAAGAGGAAAGGCTGAGAGTTGCCCATTTGAATAGCAAGAGC
EX762366       <-- TGTCTGTTGAAGAGGAAAGGCTGAGAGTTGCCCATTTGAATAGCAAGAGC
FD543829       <-- TGTCTGTTAAAGAGGAAAGGCTGAGAGTTGCCCATTTGAATAGCAAGAGC
EX886680       <-- TGTCTGTTAAAGAGGAAAGGCTGAGAGTTGCCCATTTGAATAGCAAGAGC
FD561859       <-- TGTCTGTTAAAGAGGGAAGGCTGAGAGTTGCCCATTTGAATAGCAAGAGC
FD577007       <-- TGTCTGTTAAAGAGGAAAGGCTGAGAGTTGCCCATTTGAATAGCAAGAGC
FD559806       <-- TGTCTGTTAAAGAGGAAAGGCTGAGAGTTGCCCATTTGAATAGCAAGAGC
EY948339       <-- TGTCTGTTAAAGAGGAAAGGCTGAGAGc......................
FD965190       <-- TGTCTGTTAAAGAGGAAAGGCTGAGAGTTGCCCATTTGAATAGCAAGAGC
HS106830       <-- TGTCTGTTAAAGAGGAAAGGCTGAGAGTTGCCCATTTGAATAGCAAGAGC
EY939188       <-- TGTCTGTTAAAGAGGAAAGGCTGAGAGTTGCCCATTTGAATAGCAAGAGC
FD972551       <-- ..................................................
FD565906       --> TGTCTGTTAAAGAGGGAAGGCTGAGAGTTGCCCATTTGAATAGCAAGAGC
FD581392       --> ..................................................
EW736462       --> TGTCTGTTAAAGAGGAAAGGCTGAAAGTTACCCATTTGAATAGCAAGAGC
FY439390       --> TGTCTGTTAAAGAGGAAAGGCTGAGAGTTGCCCATTTGAATAGCAAGAGC
EW721229       --> TGTCTGTTAAAGAGGAAAGGCTGAGAGTTGCCCATTTGAATAGCAAGAGC
EX775647       --> TGTCTGTTAAAGAGGAAAGGCTGAG-GTTGCCCATTTGAATAGCAAGAGC
EY942514       --> TGTCTGTTAAAGAGGAAAGGCTGAGAGTTGCCCATTTGAATAGCAAGAGC
FD539581       --> TGTCTGTTAAAGAGGAAAGGCTGAAAGTTGCCCATTTGAATAGCAAGAGC

               751    -    801
UN16908        --> AGCCTCATCATGAGTGTTGTATCTCACAAAACCAAAGCCTTTGTCTCGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921214       <-- AGCCTCATCATGAGTGTTGTATCTCACAAAACCAAAGCCTTTGTCTCGCT
EX762366       <-- AGCCTCATCATGAGTGTTGTATCTCACAAAACCAAAGCCTTTGTCTCGCT
FD543829       <-- AGCCTCATCATGAGTGTTGTATCTCACAAAACCAAAGCCTTTGTCTCGCT
EX886680       <-- AGCCTCATCATGAGTGTTGTATCTCACAAAACCAAAGCCTTTGTCTCGCT
FD561859       <-- AGCCTCATCATGAGTGTTGTATCTCACAAAACCAAAGCCTTTGTCTCGCT
FD577007       <-- AGCCTCATCATGAGTGTTGTATCTCACAAAACCAAAGCCTTTGTCTCGCT
FD559806       <-- AGCCTCATCATGAGTGTTGTATCTCACAAAACCAAAGCCTTTGTCTCGCT
EY948339       <-- ..................................................
FD965190       <-- AGCCTCATCATGAGTGTTGTATCTCACAAAACCAAAGCCTTTGTCTCGCT
HS106830       <-- AGCCTCATCATGAGTGTTGTATCTCACAAAACCAAAGCCTTTGTCTCGCT
EY939188       <-- AGCCTCATCATGAGTGTTGTATCTCACAAAACCAAAGCCTTTGTCTCGCT
FD972551       <-- ..................................................
FD565906       --> AGCCTCATCATGAGTGTTGTATCTCACAAAACCAAAGCCTTTGTCTCGCT
FD581392       --> ..................................................
EW736462       --> AGCCTCATCATGAGTGTTGTATCTCACAAAACCAAAGCCTTTGTCTCGCT
FY439390       --> AGCCTCATCATGAGTGTTGTATCTCACAAAACCAAAGCCTTTGTCTCGCT
EW721229       --> AGCCTCATCATGAGTGTTGTATCTCACAAAACCAAAGCCTTTGTCTCGCT
EX775647       --> AGCCTCATCATGAGTGTTGTATCTCACAAAACCAAAGCCTTTGTCTCGCT
EY942514       --> AGCCTCATCATGAGTGTTGTATCTCACAAAACCAAAGCCTTTGTCTCGCT
FD539581       --> AGCCTCATCATGAGTGTTGTATCTCACAAAACCAAAGCCTTTGTCTCGCT

               801    -    851
UN16908        --> GGACACGGACCTCTTCAATCACTCCAGCGCCAAGTGTATGGAACAGGCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921214       <-- GGACACGGACCTCTTCAATCACTCCAGCGCCAAGTGTATGGAACAGGCGG
EX762366       <-- GGACACGGACCTCTTCAATCACTCCAGCGCCAAGTGTATGGAACAGGCGG
FD543829       <-- GGACACGGACCTCTTCGATCACTCCAGCGCCAAGTGTATGGAACAGGCGG
EX886680       <-- GGACACGGACCTCTTCAATCACTCCAGCGCCAAGTGTATGGAACAGGCGG
FD561859       <-- GGACACGGACCTCTTCAATCACTCCAGCGCCAAGTGTATGGAACAGGCGG
FD577007       <-- GGACACGGACCTCTTCAATCACTCCAGCGCCAAGTGTATGGAACAGGCGG
FD559806       <-- GGACACGGACCTCTTCAATCACTCCAGCGCCAAGTGTATGGAACAGGCGG
EY948339       <-- ..................................................
FD965190       <-- GGACACGGACCTCTTCAATCACTCCAGCGCCAAGTGTATGGAACAGGCGG
HS106830       <-- GGACACGGACCTCTTCAATCACTCCAGCGCCAAGTGTATGGAACAGGCGG
EY939188       <-- GGACACGGACCTCTTCAATCACTCCAGCGCCAAGTGTATAGAACAGGCGG
FD972551       <-- ..................................................
FD565906       --> ..................................................
FD581392       --> ..................................................
EW736462       --> GGACACGGACCTCTTCAATCACTCCAGCGCCAAGTGTATGGAACAGGCGG
FY439390       --> GGACACGGACCTCTTCAATCACTCCAGCGCCAAGTGTATGGAACAGGCGG
EW721229       --> GGACACGGACCTCTTCAATCACTCCAGCGCCAAGTGTATGGAACAGGCGG
EX775647       --> GGACACGGACCTCTTCAATCACTCCAGCGCCAAGTGTATGGAACAGGCGG
EY942514       --> GGACACGGACCTCTTCAATCACTCCAGCGCCAAGTGTATGGA........
FD539581       --> GGACACGGACCTCTTCGATCACTCCAGCGCCAAGTGTATGGAACAGGCGG

               851    -    901
UN16908        --> TGTAGATCAAGCTGAGTTACTTCAGGAGCGAGGTTTCCTACATACACAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921214       <-- TGAAGATCAAGCTGAGTTACTTCAGGAGCGAGGTTTCCTACATACACAGT  Raphanus raphanistrum subsp. landra
EX762366       <-- TGAAGATCAAGCTGAGTTACTTCAGGAGCGAGGTTTCCTACATACACAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD543829       <-- TGTAGATCAAGCTGAGTTACTTCAGGAGCGAGGTTTCCTACATACACAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX886680       <-- TGTAGATCAAGCTGAGTTACTTCAGGAGCGAGGTTTCCTACATACACAGT  Raphanus sativus var. oleiformis
FD561859       <-- TGTAGATCAAGCTGAGTTACTTCAGGAGCGAGGTTTCCTACATACACAGT  Raphanus sativus var. oleiformis
FD577007       <-- TGTAGATCAAGCTGAGTTACTTCAGGAGCGAGGTTTCCTACATACACAGT  Raphanus sativus cv Rat-Tail Radish #3870
FD559806       <-- TGAAGATCAAGCTGAGTTACTTCAGGAGCGAGGTTTCCTACATACACAGT  Raphanus raphanistrum subsp. landra
EY948339       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD965190       <-- TGAAGATCAAGCTGAGTTACTTCAGGAGCGAGGTTTCCTACATACACAGT  Raphanus raphanistrum subsp. maritimus
HS106830       <-- TGTAGATCAAGCTGAGTTACTTCAGGAGCGAGGTTTCCTACATACACAGT  Raphanus sativus var. niger
EY939188       <-- TGTAGATCAAGCTGAGTTACTTCAGGAGCGAGGTTTCCTACATACACAGT  Raphanus sativus cv Early Scarlet Globe
FD972551       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD565906       --> ..................................................  Raphanus sativus var. oleiformis
FD581392       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW736462       --> TG................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY439390       --> TGTAGATCAAGCTGAGTTACTTCAGGAGCGAGGTTTCCTACATACACAGT  Raphanus sativus cv GSK3-1
EW721229       --> TGTAGATCAAGCTGAGTTACTTCAGGAGCGAGGTTTCCTACATACACAGT  Raphanus sativus var. oleiformis
EX775647       --> TGAAGATCAAGCTGAGTTACTTCAGGAGCGAGGTTTCCTACATACACAGT  Raphanus raphanistrum subsp. landra
EY942514       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD539581       --> TGTAGATCAAGCTGAGTTACTTCAGGAGCGAGGTTTCCTACATACACAGT  Raphanus raphanistrum subsp. raphanistrum (MS)

               901    -    951
UN16908        --> GGTATACTGAGGATTGTTTTCAGGAGCTTCTTCGTTTGAGATTGAGATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921214       <-- GGTATACTGAGGATTGTTTTCAGGAGCTTCTTCGTTTGAGATTGAGATCT
EX762366       <-- GGTGTATTGAGGATTGTTTTCAGGAGCTTCTTCGTTTGAGATTGAGATCT
FD543829       <-- GGTATACTGAGGATTGTTTTCAGGAGCTTCTTCGTTTGAGATTGAGATCT
EX886680       <-- GGTATACTGAGGATTGTTTTCAGGAGCTTCTTCGTTTGAGATTGAGTTCT
FD561859       <-- GGTATACTGAGGATTGTTTTCAGGAGCTTCTTCGTTTGAGATTGAGATCT
FD577007       <-- GGTATACTGAGGATTGTTTTCAGGAGCTTCTTCGTTTGAGATTGAGATCT
FD559806       <-- GGTATACTGAGGATTGTTTTCAGGAGCTTCTTCGTTTGAGATTGAGATCT
EY948339       <-- ..................................................
FD965190       <-- GGTATACTGAGGATTGTTTTCAGGA.........................
HS106830       <-- GGTATACTGAGGATTGTTTTCAGGAGCTTCTTCGTTTGAGATTGAGATCT
EY939188       <-- GGTATACTGAGGATTGTTTTCAGGAGCTTCTTCGTTTGAGATTGAGATCT
FD972551       <-- ..................................................
FD565906       --> ..................................................
FD581392       --> ..................................................
EW736462       --> ..................................................
FY439390       --> GGTATACTGAGGATTGTTTTCAGGAGCTTCTTCGTTTGAGATTGAGATCT
EW721229       --> GGTATACTGAGGATTGTTTTCAGGAGCTTCTTCGTTTGAGATTGAGATCT
EX775647       --> GGTATAC...........................................
EY942514       --> ..................................................
FD539581       --> GGTATACTGAGGATTGTTTTCAGGAGCTTCTTCGTTTGAGATTGAGATCT

               951    -   1001
UN16908        --> CTCTACCATCCTCTGACGAGCCGTTTGTGAGTTCAACGACACTTTTTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921214       <-- CTCTACCATCCTCTGAAGAGCCGTTTGTAAGTTCc...............  Raphanus raphanistrum subsp. landra
EX762366       <-- CTCTACCc..........................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD543829       <-- CTCTACCATCCTCTGAAGAGCCGTTTGTGAGTTCAACGACACTTTTTCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX886680       <-- CTCTACCATCCTCTGACGAGCCGTTTGTGAGTTCAACG............  Raphanus sativus var. oleiformis
FD561859       <-- CTCTACCATCCTCTGACGAGCCGTTTGTGAGTTCAACGACACTTTTTCCA  Raphanus sativus var. oleiformis
FD577007       <-- CTCTACCATCCTCTGACGAGCCGTTTGTGAGTTCAACGACACTTTTTtcc  Raphanus sativus cv Rat-Tail Radish #3870
FD559806       <-- CTCTACCATCCTCTGAAGAGCCGTTTGTGAGTTCAACGACACTTTTTCCc  Raphanus raphanistrum subsp. landra
EY948339       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD965190       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
HS106830       <-- CTCTACCATCCTCTGACGAGCCGTTTGTGAGTTCAACGACACTTTTTCCA  Raphanus sativus var. niger
EY939188       <-- CTCTACCATCCTCTGACGAGCCGTTTGTGAGTTCAACGACACTTTTTCCA  Raphanus sativus cv Early Scarlet Globe
FD972551       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD565906       --> ..................................................  Raphanus sativus var. oleiformis
FD581392       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW736462       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY439390       --> CTCTACCATCCTCTGACGAGCCGTTTGTGAGTTCAACGACACTTTTTCCA  Raphanus sativus cv GSK3-1
EW721229       --> CTCTACCATCCTCTGACGAGCCGTTTGTG.....................  Raphanus sativus var. oleiformis
EX775647       --> ..................................................  Raphanus raphanistrum subsp. landra
EY942514       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD539581       --> CTCTACCATCCTCTGAAGAGCCGTTTGTGAGTTCAACGACACTTTTTCCA  Raphanus raphanistrum subsp. raphanistrum (MS)

               1001   -   1051
UN16908        --> TCAGAGCTATGTTTGTCCTCCCCAAAAGTAGCACCTTTTGTCGCCCAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921214       <-- ..................................................
EX762366       <-- ..................................................
FD543829       <-- TCAGAGCTATGTTTGTCATCGCCAAAAGTAGCACCTTTTGTCGCCCc...
EX886680       <-- ..................................................
FD561859       <-- TCAGAGCTATGTTTGTCCTCCCCAAAAGTAGCACCTTTTGTCGCCCAGTT
FD577007       <-- c.................................................
FD559806       <-- ..................................................
EY948339       <-- ..................................................
FD965190       <-- ..................................................
HS106830       <-- TCAGAGCTATGTTTGTCCTCCCCAAAAGTAGCACCTTTTGTCGCCCAGTT
EY939188       <-- TCAGAGCTATGCTTGTCCTCCCCAAAAGTAGCACCTTTTGTCGCCCAGTT
FD972551       <-- ..................................................
FD565906       --> ..................................................
FD581392       --> ..................................................
EW736462       --> ..................................................
FY439390       --> TCAGAGCTATGTTTGTCCTCCCCAAAAGTAGCACCTTTTGTCGCCCAGTT
EW721229       --> ..................................................
EX775647       --> ..................................................
EY942514       --> ..................................................
FD539581       --> TCAGAGCTAT........................................

               1051   -   1101
UN16908        --> GCATCTGATTTGTCTGCTACTTAACCATTTACCATTCATTTCATTTATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921214       <-- ..................................................
EX762366       <-- ..................................................
FD543829       <-- ..................................................
EX886680       <-- ..................................................
FD561859       <-- GCATCTGATTTGTCTGCTACTTAACCATTTACCc................
FD577007       <-- ..................................................
FD559806       <-- ..................................................
EY948339       <-- ..................................................
FD965190       <-- ..................................................
HS106830       <-- GCATCTGATTTGTCTGCTACTTAACCATTTACCATTCATTTCATTTATGG
EY939188       <-- GCATCTGATTTGTCTGCTACTTAACCATTTACCATTCATTTCATTTATGG
FD972551       <-- ..................................................
FD565906       --> ..................................................
FD581392       --> ..................................................
EW736462       --> ..................................................
FY439390       --> GCATCTGATTTGTCTGCTACTTAACCATTTA...................
EW721229       --> ..................................................
EX775647       --> ..................................................
EY942514       --> ..................................................
FD539581       --> ..................................................

               1101   -   1151
UN16908        --> CATTTTGAGCATC-TG-CTGATTGCGGAAGGAAACAAACCCAAAGCCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921214       <-- ..................................................
EX762366       <-- ..................................................
FD543829       <-- ..................................................
EX886680       <-- ..................................................
FD561859       <-- ..................................................
FD577007       <-- ..................................................
FD559806       <-- ..................................................
EY948339       <-- ..................................................
FD965190       <-- ..................................................
HS106830       <-- CATTTTGAGCATCCTGAATGATTGCGGcctcgtgc...............
EY939188       <-- CATTTTGAGCATC-TG-CTGATTGCGGAAGGAAACAAACCCAAAGCCTCT
FD972551       <-- ..................................................
FD565906       --> ..................................................
FD581392       --> ..................................................
EW736462       --> ..................................................
FY439390       --> ..................................................
EW721229       --> ..................................................
EX775647       --> ..................................................
EY942514       --> ..................................................
FD539581       --> ..................................................

               1151   -   1201
UN16908        --> TGAGCGTCCAGTTTTCTGGTCCCACATTACTCTTGCATCCGAGCAAGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921214       <-- ..................................................
EX762366       <-- ..................................................
FD543829       <-- ..................................................
EX886680       <-- ..................................................
FD561859       <-- ..................................................
FD577007       <-- ..................................................
FD559806       <-- ..................................................
EY948339       <-- ..................................................
FD965190       <-- ..................................................
HS106830       <-- ..................................................
EY939188       <-- TGAGCGTCCAGTTTTCTGGTCCCACATTACTCTTGCATCCGAGCAAGTGT
FD972551       <-- ............TTTCTGGTCCCACATTACTCTTGCATCCGAGCAAGTGT
FD565906       --> ..................................................
FD581392       --> ..................................................
EW736462       --> ..................................................
FY439390       --> ..................................................
EW721229       --> ..................................................
EX775647       --> ..................................................
EY942514       --> ..................................................
FD539581       --> ..................................................

               1201   -   1251
UN16908        --> TAAAGGCAGAAAAGCTTTCAAACAAAGCTGCATCAGTAACATCTGGACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921214       <-- ..................................................
EX762366       <-- ..................................................
FD543829       <-- ..................................................
EX886680       <-- ..................................................
FD561859       <-- ..................................................
FD577007       <-- ..................................................
FD559806       <-- ..................................................
EY948339       <-- ..................................................
FD965190       <-- ..................................................
HS106830       <-- ..................................................
EY939188       <-- TAAAGGCAGAAAAGCTTTCAAACAAAGCTGCATCAGTAACATCTGGACTG
FD972551       <-- TAAAGGCAGAAAAGCTTTCAAACAAAGCTGCATCAGTAACATCTGGACTA
FD565906       --> ..................................................
FD581392       --> ..................................................
EW736462       --> ..................................................
FY439390       --> ..................................................
EW721229       --> ..................................................
EX775647       --> ..................................................
EY942514       --> ..................................................
FD539581       --> ..................................................

               1251   -   1301
UN16908        --> AGATCTCCAACAAAAATGTTGAAATGGCTTGATGTGTCTTCCCTTTGACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921214       <-- ..................................................
EX762366       <-- ..................................................
FD543829       <-- ..................................................
EX886680       <-- ..................................................
FD561859       <-- ..................................................
FD577007       <-- ..................................................
FD559806       <-- ..................................................
EY948339       <-- ..................................................
FD965190       <-- ..................................................
HS106830       <-- ..................................................
EY939188       <-- AGATCTCCAACAAAAATGTTGAAATGGCTTGATGTGTCTTCCCTTTGACC
FD972551       <-- AGATCTCCAACAAAAATGTTGAAATGGCTTGATGTGTCTTCCCTTTGACC
FD565906       --> ..................................................
FD581392       --> ..................................................
EW736462       --> ..................................................
FY439390       --> ..................................................
EW721229       --> ..................................................
EX775647       --> ..................................................
EY942514       --> ..................................................
FD539581       --> ..................................................

               1301   -   1351
UN16908        --> AGTAGCATACGCCCAGTTAACTTTGATAGGCCGTCCAAACAGATGCCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921214       <-- ..................................................
EX762366       <-- ..................................................
FD543829       <-- ..................................................
EX886680       <-- ..................................................
FD561859       <-- ..................................................
FD577007       <-- ..................................................
FD559806       <-- ..................................................
EY948339       <-- ..................................................
FD965190       <-- ..................................................
HS106830       <-- ..................................................
EY939188       <-- AGTAGCATACGCCCAGTTAACTTTGATAGGCtg.................
FD972551       <-- AGTAGCATACGCCCAGTTAACTTTGATAGGCCGTCCAAACAGATGCCTTC
FD565906       --> ..................................................
FD581392       --> ..................................................
EW736462       --> ..................................................
FY439390       --> ..................................................
EW721229       --> ..................................................
EX775647       --> ..................................................
EY942514       --> ..................................................
FD539581       --> ..................................................

               1351   -   1401
UN16908        --> CGTTAAGAGACATGATAGCCAAACCAGCAGATCGTCGATCAAAGTAGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921214       <-- ..................................................
EX762366       <-- ..................................................
FD543829       <-- ..................................................
EX886680       <-- ..................................................
FD561859       <-- ..................................................
FD577007       <-- ..................................................
FD559806       <-- ..................................................
EY948339       <-- ..................................................
FD965190       <-- ..................................................
HS106830       <-- ..................................................
EY939188       <-- ..................................................
FD972551       <-- CGTTAAGAGACATGATAGCCAAACCAGCAGATCGTCGATCAAAGTAGTGA
FD565906       --> ..................................................
FD581392       --> ..................................................
EW736462       --> ..................................................
FY439390       --> ..................................................
EW721229       --> ..................................................
EX775647       --> ..................................................
EY942514       --> ..................................................
FD539581       --> ..................................................

               1401   -   1451
UN16908        --> ACAAATCCATATGATGACTTATCTTTTCTGATGAGTTTACAGCTCTCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921214       <-- ..................................................
EX762366       <-- ..................................................
FD543829       <-- ..................................................
EX886680       <-- ..................................................
FD561859       <-- ..................................................
FD577007       <-- ..................................................
FD559806       <-- ..................................................
EY948339       <-- ..................................................
FD965190       <-- ..................................................
HS106830       <-- ..................................................
EY939188       <-- ..................................................
FD972551       <-- ACAAATCCATATGATGACTTATCTTTTCTGATGAGTTTACAGCTCTCAAC
FD565906       --> ..................................................
FD581392       --> ..................................................
EW736462       --> ..................................................
FY439390       --> ..................................................
EW721229       --> ..................................................
EX775647       --> ..................................................
EY942514       --> ..................................................
FD539581       --> ..................................................

               1451   -   1501
UN16908        --> AGGGCCGGTGCTGGCAAAAATCTCTTGAAGAAGAACCTCAGTGACCTGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921214       <-- ..................................................
EX762366       <-- ..................................................
FD543829       <-- ..................................................
EX886680       <-- ..................................................
FD561859       <-- ..................................................
FD577007       <-- ..................................................
FD559806       <-- ..................................................
EY948339       <-- ..................................................
FD965190       <-- ..................................................
HS106830       <-- ..................................................
EY939188       <-- ..................................................
FD972551       <-- AGGGCCGGTGCTGGCAAAAATCTCTTGAAGAAGAACCTCAGTGACCTGCG
FD565906       --> ..................................................
FD581392       --> ..................................................
EW736462       --> ..................................................
FY439390       --> ..................................................
EW721229       --> ..................................................
EX775647       --> ..................................................
EY942514       --> ..................................................
FD539581       --> ..................................................

               1501   -   1551
UN16908        --> TATGGATGTTGCCAGCATACACACTGCGGCAAGTAGTGGGATCAAAACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921214       <-- ..................................................
EX762366       <-- ..................................................
FD543829       <-- ..................................................
EX886680       <-- ..................................................
FD561859       <-- ..................................................
FD577007       <-- ..................................................
FD559806       <-- ..................................................
EY948339       <-- ..................................................
FD965190       <-- ..................................................
HS106830       <-- ..................................................
EY939188       <-- ..................................................
FD972551       <-- TATGGATGTTGCCAGCATACACACTGCGGCAAGTAGTGGGATCAAAACCA
FD565906       --> ..................................................
FD581392       --> ..................................................
EW736462       --> ..................................................
FY439390       --> ..................................................
EW721229       --> ..................................................
EX775647       --> ..................................................
EY942514       --> ..................................................
FD539581       --> ..................................................

               1551   -   1601
UN16908        --> GGAGGAAGGTTTCCACTTGGTAGAGGCTCCATCTGAGGAGGGGGAGGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921214       <-- ..................................................
EX762366       <-- ..................................................
FD543829       <-- ..................................................
EX886680       <-- ..................................................
FD561859       <-- ..................................................
FD577007       <-- ..................................................
FD559806       <-- ..................................................
EY948339       <-- ..................................................
FD965190       <-- ..................................................
HS106830       <-- ..................................................
EY939188       <-- ..................................................
FD972551       <-- GGAGGAAGGTTTCCACTTGGTAGAGGCTCCATCTGAGGAGGGGGAGGTGT
FD565906       --> ..................................................
FD581392       --> ..................................................
EW736462       --> ..................................................
FY439390       --> ..................................................
EW721229       --> ..................................................
EX775647       --> ..................................................
EY942514       --> ..................................................
FD539581       --> ..................................................

               1601   -   1651
UN16908        --> TGTTGCATCAAAGCTTGCTGCATCATTGCTTGTTGCTGCTGCTGCTGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921214       <-- ..................................................
EX762366       <-- ..................................................
FD543829       <-- ..................................................
EX886680       <-- ..................................................
FD561859       <-- ..................................................
FD577007       <-- ..................................................
FD559806       <-- ..................................................
EY948339       <-- ..................................................
FD965190       <-- ..................................................
HS106830       <-- ..................................................
EY939188       <-- ..................................................
FD972551       <-- TGTTGCATCAAAGCTTGCTGCATCATTGCTTGTTGCTGCTGCTGCTGCTG
FD565906       --> ..................................................
FD581392       --> ..................................................
EW736462       --> ..................................................
FY439390       --> ..................................................
EW721229       --> ..................................................
EX775647       --> ..................................................
EY942514       --> ..................................................
FD539581       --> ..................................................

               1651   -   1701
UN16908        --> TTTGAGCCTCGGATTCTGCATCTTTTTTTTTCTCACTGCGAGATGAGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921214       <-- ..................................................
EX762366       <-- ..................................................
FD543829       <-- ..................................................
EX886680       <-- ..................................................
FD561859       <-- ..................................................
FD577007       <-- ..................................................
FD559806       <-- ..................................................
EY948339       <-- ..................................................
FD965190       <-- ..................................................
HS106830       <-- ..................................................
EY939188       <-- ..................................................
FD972551       <-- TTTGAGCCTCGGATTCTGCATCTTTTTTTTTCTCACTGCGAGATGAGATG
FD565906       --> ..................................................
FD581392       --> ..................................................
EW736462       --> ..................................................
FY439390       --> ..................................................
EW721229       --> ..................................................
EX775647       --> ..................................................
EY942514       --> ..................................................
FD539581       --> ..................................................

               1701   -   1751
UN16908        --> GAAAATATCTGTTTTGTTTCCCGAGAAAAGACCTCTTTCCTCTTTTTAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921214       <-- ..................................................
EX762366       <-- ..................................................
FD543829       <-- ..................................................
EX886680       <-- ..................................................
FD561859       <-- ..................................................
FD577007       <-- ..................................................
FD559806       <-- ..................................................
EY948339       <-- ..................................................
FD965190       <-- ..................................................
HS106830       <-- ..................................................
EY939188       <-- ..................................................
FD972551       <-- GAAAATATCTGTTTTGTTTCCCGAGAAAAGACCTCTTTCCTCTTTTTAGC
FD565906       --> ..................................................
FD581392       --> ..................................................
EW736462       --> ..................................................
FY439390       --> ..................................................
EW721229       --> ..................................................
EX775647       --> ..................................................
EY942514       --> ..................................................
FD539581       --> ..................................................

               1751   -   1801
UN16908        --> TTAGGGTTCGAAATCAACT
                   ~~~~~~~~~~~~~~~~~~~
EY921214       <-- ...................
EX762366       <-- ...................
FD543829       <-- ...................
EX886680       <-- ...................
FD561859       <-- ...................
FD577007       <-- ...................
FD559806       <-- ...................
EY948339       <-- ...................
FD965190       <-- ...................
HS106830       <-- ...................
EY939188       <-- ...................
FD972551       <-- TTAGGGTTCGAAATCAACT
FD565906       --> ...................
FD581392       --> ...................
EW736462       --> ...................
FY439390       --> ...................
EW721229       --> ...................
EX775647       --> ...................
EY942514       --> ...................
FD539581       --> ...................