Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN16923

               1      -     51
UN16923        --> GGATCTAATGATCGATCGTAAAAGGCAAACATCGGCCCAGCACAAGGACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542466       <-- ..................................................
EY901703       <-- ..................................................
EY918833       <-- ..................................................
FD567212       <-- ..................................................
EW730045       <-- ..................................................
FD553179       <-- ..................................................
FD536694       <-- ..................................................
EX888622       --> GGATCTAATGATCGATCGTAAAAGGCAAACATCGGCCCAGCACAAGGACC
EY922978       --> ..................................................
FD556976       --> ..................................................
FD571600       --> ..................................................
EW725506       --> ..................................................
FD941534       --> ..................................................

               51     -    101
UN16923        --> TGTACGTATATACATAGGATCATTGTCGTTATGTGGAAGTTGAAAATAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542466       <-- ..................................................
EY901703       <-- ..................................................
EY918833       <-- ..................................................
FD567212       <-- ..................................................
EW730045       <-- ..................................................
FD553179       <-- ..................................................
FD536694       <-- ..................................................
EX888622       --> TGTACGTATATACATAGGATCATTGTCGTTATGTGGAAGTTGAAAATAGG
EY922978       --> ..................................................
FD556976       --> ..................................................
FD571600       --> ..................................................
EW725506       --> ..................................................
FD941534       --> ..................................................

               101    -    151
UN16923        --> AGAGGGAAATGGGGAAGACCCTTACTTGCTCAGCAGCAACAACTTTGTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542466       <-- ..................................................
EY901703       <-- ..................................................
EY918833       <-- ..................................................
FD567212       <-- ..................................................
EW730045       <-- ..................................................
FD553179       <-- ..................................................
FD536694       <-- ..................................................
EX888622       --> AGAGGGAAATGGGGAAGACCCTTACTTGCTCAGCAGCAACAACTTTGTCG
EY922978       --> ..................................................
FD556976       --> ..................................................
FD571600       --> ..................................................
EW725506       --> ..................................................
FD941534       --> ..................................................

               151    -    201
UN16923        --> GACGTCAAACATGGAAATTTGATCCCAAAGCCGGCACGGCAGAGGAACGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542466       <-- ..................................................
EY901703       <-- ..................................................
EY918833       <-- ..................................................
FD567212       <-- ..................................................
EW730045       <-- ..................................................
FD553179       <-- ..................................................
FD536694       <-- ..................................................
EX888622       --> GACGTCAAACATGGAAATTTGATCCCAAAGCCGGCACGGCAGAGGAACGA
EY922978       --> ..................................................
FD556976       --> ..................................................
FD571600       --> ..................................................
EW725506       --> ..................................................
FD941534       --> ..................................................

               201    -    251
UN16923        --> GGCGCCGTCGAAGAAGCTCGCCGGCATTTCTTGATCAACCGTCCTCGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542466       <-- ..................................................
EY901703       <-- ..................................................
EY918833       <-- ..................................................
FD567212       <-- ..................................................
EW730045       <-- ..................................................
FD553179       <-- ..................................................
FD536694       <-- ..................................................
EX888622       --> GGCGCCGTCGAAGAAGCTCGCCGGCATTTCTTGATCAACCGTCCTCGTGT
EY922978       --> ..................................................
FD556976       --> ..................................................
FD571600       --> ..................................................
EW725506       --> ..................................................
FD941534       --> ..................................................

               251    -    301
UN16923        --> AAAAGGCTGCAGTGATATCTTGTGGAGAATGCAATTTCTGAAAGATGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542466       <-- ..................................................
EY901703       <-- ..................................................
EY918833       <-- ..................................................
FD567212       <-- ..................................................
EW730045       <-- ..................................................
FD553179       <-- ..................................................
FD536694       <-- ..................................................
EX888622       --> AAAAGGCTGCAGTGATATCTTGTGGAGAATGCAATTTCTGAAAGATGCAA
EY922978       --> ..................................................
FD556976       --> ..................................................
FD571600       --> ..................................................
EW725506       --> ..................................................
FD941534       --> ..................................................

               301    -    351
UN16923        --> AATTCGAGCAAGCCATCCCGCCGGTGAAGATCGACGGCGACGAAGGCGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542466       <-- ..................................................
EY901703       <-- ..................................................
EY918833       <-- ..................................................
FD567212       <-- ..................................................
EW730045       <-- ..................................................
FD553179       <-- ..................................................
FD536694       <-- ..................................................
EX888622       --> AATTCGAGCAAGCCATCCCGCCGGTGAAGATCGACGGCGACGAAGGCGTA
EY922978       --> ..................................................
FD556976       --> ..................................................
FD571600       --> ..................................................
EW725506       --> ..................................................
FD941534       --> ..................................................

               351    -    401
UN16923        --> ACTTACGAGAAAGCGACGGATGCGTTACGGAGAGGAATTTCTTTCTTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542466       <-- ..................................................
EY901703       <-- ..................................................
EY918833       <-- ..................................................
FD567212       <-- ..................................................
EW730045       <-- ..................................................
FD553179       <-- ..................................................
FD536694       <-- ..................................................
EX888622       --> ACTTACGAGAAAGCGACGGATGCGTTACGGAGAGGAATTTCTTTCTTCTC
EY922978       --> ..................................................
FD556976       --> ..................................................
FD571600       --> ..................................................
EW725506       --> ..................................................
FD941534       --> ..................................................

               401    -    451
UN16923        --> GGCTCTGCAAGCCTTCGACGGTCACTGGCCAGAAGATAGATCCTGAACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542466       <-- ..................................................
EY901703       <-- ..................................................
EY918833       <-- ..................................................
FD567212       <-- ..................................................
EW730045       <-- ..................................................
FD553179       <-- ..................................................
FD536694       <-- ..................................................
EX888622       --> GGCTCTGCAAGCCTTCGACGGTCACTGGCCAGAAGATAGATCCTGAACAA
EY922978       --> ..................................................
FD556976       --> ..................................................
FD571600       --> ..................................................
EW725506       --> ..................................................
FD941534       --> ..................................................

               451    -    501
UN16923        --> ATATTCGACTCTGTTAATCTCTTGCTATCTTT-CAGAGTGAGAATGGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542466       <-- ......GACTCTGTTAATCTCTTGCTATCTTTTCAGAGTAAAAATGGAGG
EY901703       <-- ..................................................
EY918833       <-- ..................................................
FD567212       <-- ..................................................
EW730045       <-- ..................................................
FD553179       <-- ..................................................
FD536694       <-- ..................................................
EX888622       --> ATATTCGACTCTGTTAATCTCTTGCTATCTTT-CAGAGTGAGAATGGAGG
EY922978       --> ..........................gctTTT-CAGAGTGAGGATGGAGG
FD556976       --> ..................................................
FD571600       --> ..................................................
EW725506       --> ..................................................
FD941534       --> ..................................................

               501    -    551
UN16923        --> TATGACTGCATGGGAGCCCGTCCGTGCTTATGAATGGATTGAATTCCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542466       <-- TATGACTGCATGGGAGCCCGTCCGTGCTTATGAATGGATTGAATTCCTCA
EY901703       <-- ..................................................
EY918833       <-- ..................................................
FD567212       <-- ..................................................
EW730045       <-- ..................................................
FD553179       <-- ..................................................
FD536694       <-- ..................................................
EX888622       --> TATGACTGCATGGGAGCCTGTCCGTGCTTATGAATGGATTGAATTCCTCA
EY922978       --> TATGACTGCATGGGAGCCCGTCCGTGCTTATGAATGGATTGAATTCCTCA
FD556976       --> ..................................................
FD571600       --> ..................................................
EW725506       --> ..................................................
FD941534       --> ..................................................

               551    -    601
UN16923        --> ATCCCACGGAATTTCTCGCTAATCTCGTGGCCGAGCGTGAGTATGTGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542466       <-- ATCCCACGGAATTTCTGGCTAATCTCGTGGCCGAGCGTGAGTATGTGGAA
EY901703       <-- ...............................CGAGCGTGAGTATGTGGAA
EY918833       <-- ..................................................
FD567212       <-- ..................................................
EW730045       <-- ..................................................
FD553179       <-- ..................................................
FD536694       <-- ..................................................
EX888622       --> ATCCCACGGAATTTCTCACTAATCTCGTGGCCGAGCGTGAGTATGTGGAA
EY922978       --> ATCCCACGGAATTTCTCGCTAATCTCGTGGCCGAGTGTGAGTATGTGGAA
FD556976       --> ..................................................
FD571600       --> ..................................................
EW725506       --> ..................................................
FD941534       --> ..................................................

               601    -    651
UN16923        --> TGCACCTCATCTGTTATACAAGCTTTGATTCTGTTCAAGCAACTCTATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542466       <-- TGCACCTCATCTGTTATACAAGCTTTGATTCTGTTCAGGAAACTCTATCC
EY901703       <-- TGCAC-TCATCTGTTATACAAGCTTTGATTCTGTTCAAGAAACTCTATCC
EY918833       <-- ..gcaCTCATCTGTTATACAAGCTTTGATTCTGTTCAAGCAACTCTATCC
FD567212       <-- ...........TGTTATACAAGCTTTGATTCTGTTCAAGCAACTCTATCC
EW730045       <-- ..................................................
FD553179       <-- ..................................................
FD536694       <-- ..................................................
EX888622       --> TGCACCTCATCTGTTATACAAGCTTTGATTCTGTTCAAGCAACTCTATCC
EY922978       --> TGCACCTCATCTGTTATACAAGCTTTGATTCTGTTCAAGCAACTCTATCC
FD556976       --> ..................................................
FD571600       --> ..................................................
EW725506       --> ..................................................
FD941534       --> ..................................................

               651    -    701
UN16923        --> AGACCACAGGACAAAAGAGATAAGCAGGTCCATCGAGAAAGCTGTGCAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542466       <-- AGACCACAGGACAAAAGAGATAAGCCGGTCCATCGAGAAAGCTGTGCAAT
EY901703       <-- AGACCACAGGACAAAAGAGATAAGCCGGTCCATCGAGAAAGCTGTGCAAT
EY918833       <-- AGACCACAGGACAAAAGAGATAAGCAGGTCCATCGAGAAAGCTGTGCAAT
FD567212       <-- AGATCACAGGACAAAAGAGATAAACAAGTCCATCGAGAAAGCTGTGCAAT
EW730045       <-- ..................................................
FD553179       <-- ..................................................
FD536694       <-- ..................................................
EX888622       --> AGATCACAGGACAAAAGAGATAAACAAGTCCATCGAGAAAGCTGTGCAAT
EY922978       --> AGACCACAGGACAAAAGAGATAAGCAGGTCCATCGAGAAAGCTGTGCAAT
FD556976       --> ......gAGGACAAAAGAGATAAGCAGGTCCATCGAGAAAGCTGTGCAAT
FD571600       --> .............................ggATCGAGAAAGCTGTGCAAT
EW725506       --> ..................................................
FD941534       --> ..................................................

               701    -    751
UN16923        --> TCATAGAAAACGAACAGACGCCAGATGGTTCATGGTATGGGAACTGGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542466       <-- TCATAGAAAACGAACAGACGCCCGATGGTTCATGGTATGGGAACTGGGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901703       <-- TCATAGAAAACGAACAGACGCCAGATGGTCCATGGTATGGGAACTGGGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY918833       <-- TCATAGAAAACGAACAGACGCCAGATGGTTCATGGTATGGGAATTGGGGA  Raphanus raphanistrum subsp. landra
FD567212       <-- TCATAGAAAACGAACAGACGCCAGATGGTTCATGGTATGGGAACTGGGGA  Raphanus sativus var. oleiformis
EW730045       <-- ...............gGACGCCAGATGGTTCATGGTATGGGAACTGGGGA  Raphanus sativus cv Early Scarlet Globe
FD553179       <-- .........................TGGTTCATGGTATGGGAATTGGGGA  Raphanus raphanistrum subsp. landra
FD536694       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX888622       --> TCATAGAAAACGAACAGACGCCAGATGGTTCATG................  Raphanus sativus var. oleiformis
EY922978       --> TCATAGAAAACGAACAGACGCCAGATGGTTCATGGTATGGGAATTGGGGA  Raphanus raphanistrum subsp. landra
FD556976       --> TCATAGAAAACGAACAGACGCCAGATGGTTCATGGTATGGGAATTGGGGA  Raphanus raphanistrum subsp. landra
FD571600       --> TCATAGAAAACGAACAGACGCCAGATGGTTCATGGTATGGGAACTGGGGA  Raphanus sativus cv Early Scarlet Globe
EW725506       --> ...............gGACGCCAGATGGTTCATGGTATGGGAACTGGGGA  Raphanus sativus cv Early Scarlet Globe
FD941534       --> ..................................................  Raphanus sativus var. oleiformis

               751    -    801
UN16923        --> GTTTGTTTCATTTACGGAACATGGTTTGCTCTTGCCGGCCTAGCAGCCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542466       <-- GTTTGTTTCATTTACGGAACATGGTTTGCTCTTGCCGGCCTAGCAGCCGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901703       <-- GTTTGTTTCATTTACGGAACATGGTTTGCTCTTGCCGGCCTAGCAGCCGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY918833       <-- GTTTGTTTCATTTACGGAACATGGTTTGCTCTTGCCGGCCTAGCAGCCGC  Raphanus raphanistrum subsp. landra
FD567212       <-- GTTTGTTTCATTTACGGAACATGGTTCGCTCTTGCCGGCCTAGCAGCCGC  Raphanus sativus var. oleiformis
EW730045       <-- GTTTGTTTCATTTACGGAACATGGTTCGCTCTTGCCGGCCTAGCAGCCGC  Raphanus sativus cv Early Scarlet Globe
FD553179       <-- GTTTGTTTCATTTACGGAACATGGTTTGCTCTTGCCGGCCTAGCAGCCGC  Raphanus raphanistrum subsp. landra
FD536694       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX888622       --> ..................................................  Raphanus sativus var. oleiformis
EY922978       --> GTTTGTTTCATTTACGGAACATGGTTTGCTCTTGCCGGCCTAGCAGCCGC  Raphanus raphanistrum subsp. landra
FD556976       --> GTTTGTTTCATTTACGGAACATGGTTTGCTCTTGCCGGCCTAGCAGCCGC  Raphanus raphanistrum subsp. landra
FD571600       --> GTTTGTTTCATTTACGGAACATGGTTCGCTCTTGCCGGCCTAGCATCCGC  Raphanus sativus cv Early Scarlet Globe
EW725506       --> GTTTGTTTCATTTACGGAACATGGTTCGCTCTTGCCGGCCTAGCAGCCGC  Raphanus sativus cv Early Scarlet Globe
FD941534       --> ..................................................  Raphanus sativus var. oleiformis

               801    -    851
UN16923        --> TGGTGAAACATATAAAAACAGTCTGGCTATGCGTAAAGGTGTTGCGTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542466       <-- TGGTAAAACATATAAAAACAGTCTGCCTATGCGTAAAGGTGTTGCGTTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901703       <-- TGGTAAAACATATAAAAACAGTCTGCCTATGCGTAAAGGTGTTGCGTTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY918833       <-- TGGTGAAACATATAAAAACAGTCTGGCTATGCGTAAAGGTGTTCAGTTTT  Raphanus raphanistrum subsp. landra
FD567212       <-- TGGTGAAACATATAAAAACAGTCTGGCTATGCGTAAAGGTGTTGCGTTTT  Raphanus sativus var. oleiformis
EW730045       <-- TGGTGAAACATATAAAAACAGTCTGGCTATGCGTAAAGGTGTTGCGTTTT  Raphanus sativus cv Early Scarlet Globe
FD553179       <-- TGGTGAAACATATAAAAACAGTCTGGCTATGCGTAAAGGTGTTCAGTTTT  Raphanus raphanistrum subsp. landra
FD536694       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX888622       --> ..................................................  Raphanus sativus var. oleiformis
EY922978       --> TGGTGAAACATATAAAAACAGTCTGGCTATGCGTAAAGGTGTTCAGTTTT  Raphanus raphanistrum subsp. landra
FD556976       --> TGGTGAAACATATAAAAACAGTCTGGCTATGCGTAAAGGTGTTCAGTTTT  Raphanus raphanistrum subsp. landra
FD571600       --> TGGTGAAACATATAAAAACAGTCTGGCTATGCGTAAAGGTGTTGCGTTTT  Raphanus sativus cv Early Scarlet Globe
EW725506       --> TGGTGAAACATATAAAAACAGTCTGGCTATGCGTAAAGGTGTTGCGTTTT  Raphanus sativus cv Early Scarlet Globe
FD941534       --> ..................................................  Raphanus sativus var. oleiformis

               851    -    901
UN16923        --> TACTCAGGACACAGAGAGACGATGGAGGCTGGGGCGAAAGCTATCTGTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542466       <-- TACTCAGGACACAGAGAGACGATGGAGGCTGGGGCGAAAGCTATCTGTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901703       <-- TACTCAGGACACAGAGAGACGATGGAGGCTGGGGCGAAAGCTATCTGTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY918833       <-- TACTCAGGACACAGAGAGACGATGGAGGCTGGGGCGAAAGCTATCTGTCA  Raphanus raphanistrum subsp. landra
FD567212       <-- TACTCAGGACACAGAAAGACGATGGAGGCTGGGGCGAAAGCTATCTCTCA  Raphanus sativus var. oleiformis
EW730045       <-- TACTCAGGACACAGAAAGACGATGGAGGCTGGGGCGAAAGCTATCTCTCA  Raphanus sativus cv Early Scarlet Globe
FD553179       <-- TACTCAGGACACAGAGAGACGATGGAGGCTGGGGCGAAAGCTATCTGTCA  Raphanus raphanistrum subsp. landra
FD536694       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX888622       --> ..................................................  Raphanus sativus var. oleiformis
EY922978       --> TACTCAGGACACAGAGAGACGATGGAGGCTGGGGCGAAAGCTATCTGTCA  Raphanus raphanistrum subsp. landra
FD556976       --> TACTCAGGACACAGAGAGACGATGGAGGCTGGGGCGAAAGCTATCTGTCA  Raphanus raphanistrum subsp. landra
FD571600       --> TACTCAGGACACAGAAAGACGATGGAGGCTGGGGCGAAAGCTATCTCTCA  Raphanus sativus cv Early Scarlet Globe
EW725506       --> TACTCAGGACACAGAAAGACGATGGAGGCTGGGGCGAAAGCTATCTCTCA  Raphanus sativus cv Early Scarlet Globe
FD941534       --> ..................................................  Raphanus sativus var. oleiformis

               901    -    951
UN16923        --> TGCCCTGAACAGAGATACATACCATCAGAAGGGAAAACATCAAACTTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542466       <-- TGCCCTGAACAGAGATACATACCATCAGAAGGGAAAACATCAAACTTGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901703       <-- TGCCCTGAACAGAGATACATACCATCAGAAGGGAAAACATCAAACTTGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY918833       <-- TGTCCTGAACAGAGATACATACCATTAGAAGGGAAAACATCAAACTTGGT  Raphanus raphanistrum subsp. landra
FD567212       <-- TGCCCTGAACAGAGATACATACCATCAGAAGGGAAAAGATCCAACTTGGT  Raphanus sativus var. oleiformis
EW730045       <-- TGCCCTGAACAGAGATACATACCATCAGAAGGGAAAAGATCCAACTTGGT  Raphanus sativus cv Early Scarlet Globe
FD553179       <-- TGTCCTGAACAGAGATACATACCATTAGAAGGGGAAACATCAAACTTGGT  Raphanus raphanistrum subsp. landra
FD536694       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX888622       --> ..................................................  Raphanus sativus var. oleiformis
EY922978       --> TGTCCTGAACAGAGATACATACCATTAGAAGGGAAAACATCAAACTTGGT  Raphanus raphanistrum subsp. landra
FD556976       --> TGTCCTGAACAGAGATACATACCATTAGAAGGGGAAACATCAAACTTGGT  Raphanus raphanistrum subsp. landra
FD571600       --> TGCCCTGAACAGAGATACATACCATCAGAAGGGAAAGGATCCAACTTGGT  Raphanus sativus cv Early Scarlet Globe
EW725506       --> TGCCCTGAACAGAGATACATACCATCAGAAGGGAAAAGATCCAACTTGGT  Raphanus sativus cv Early Scarlet Globe
FD941534       --> ..................................................  Raphanus sativus var. oleiformis

               951    -   1001
UN16923        --> GCAAACAGCTTGGGCAGTAATGGGTCTGATTCACGCTGGACAGGCTGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542466       <-- GCAAACAGCTTGGGCAGTAATGGGTCTGATTCACGCTGGACAGGCTGAGA
EY901703       <-- GCAAACAGCTTGGGCAGTAATGGGTCTGATTCACGCTGGACAGGCTGAGA
EY918833       <-- GCAAACAGCTTGGGCAGTAATGGGTCTGATTCACGCTGGGCAGGCTGAGA
FD567212       <-- GCAAACAGCTTGGGCAGTAATGGGTCTGATTCACGCTGGACAGGCTGAGA
EW730045       <-- GCAAACAGCTTGGGCAGTAATGGGTCTGATTCACGCTGGACAGGCTGAGA
FD553179       <-- GCAAACAGCTTGGGCAGTAATGGGTCTGATTCACGCTGGACAGGCTGAGA
FD536694       <-- .......................GTCTGATTCACGCTGGACAGGCTGAGA
EX888622       --> ..................................................
EY922978       --> GCAAACAGCTTGGGCAGTAATGGGTCTGATTCACGCTGGGCAGGCTGAGA
FD556976       --> GCAAACAGCTTGGGCAGTAATGGGTCTGATTCACGCTGGACAGGCTGAGA
FD571600       --> GCAAACAGCTTGGGCAGTAATGGGTCTGATTCACGCTGGACAGGCTGAGA
EW725506       --> GCAAACAGCTTGGGCAGTAATGGGTCTGATTCACGCTGGACAGGCTGAGA
FD941534       --> ..................................................

               1001   -   1051
UN16923        --> GAGATCCAGTACCTCTTCACCGTGCTGCAAAACTTATCATCAATTCGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542466       <-- GAGATCCAGTACCTCTTCACCGTGCTGCAAAACTTATCATCAATTCGCAA
EY901703       <-- GAGATCCAGTACCTCTTCACCGTGCTGCAAAACTTATCATCAATTCGCAA
EY918833       <-- GAGATCCAGTACCTCTTCACCGTGCTGCAAAACTTATCATCAATTCGCAA
FD567212       <-- GAGATCCAGTACCTCTTCACCGTGCTGCAAAACTTATCATCAATTCGCAA
EW730045       <-- GAGATCCAGTACCTCTTCACCGTGCTGCAAAACTTATCATCAATTCGCAA
FD553179       <-- GAGATCCAGTACCTCTTCACCGTGCTGCAAAACTTATCATCAATTCGCAA
FD536694       <-- GAGATCCAGTACCTTTTCACCGTGCTGCAAAACTTATCATCAATTCGCAA
EX888622       --> ..................................................
EY922978       --> GAGATCCAGTACCTCTTCACCGTGCTGCAAAACTTATCATCAATTCGCAA
FD556976       --> GAGATCCAGTACCTCTTCACCGTGCTGCAAAACTTATCATCAATTCGCAA
FD571600       --> GAGATCCAGTACCTCTTCACCGTGCTGCAAAACTTATCATCAATTCGCAA
EW725506       --> GAGATCCAGTACCTCTTCACCGTGCTGCAAAACTTATCATCAATTCGCAA
FD941534       --> .........gACCTCTTCACCGTGCTGCAAAACTTATCATCAATTCGCAA

               1051   -   1101
UN16923        --> ATGGAGAATGGAGATTTCCCTCAACAGGAGATAGTAGGAGTGTTCATGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542466       <-- ATGGAGAATGGAGATTTCCCTCAACAGGAGATAGTAGGAGTGTTCATGAG
EY901703       <-- ATGGAGAATGGAGATTTCCCTCAACAGGAGATAGTAGGAGTGTTCATGAG
EY918833       <-- ATGGAGAATGGAGATTTCCCTCAACAGGAGATAGTAGGAGTGTTCATGAG
FD567212       <-- ATGGAGAATGGAGATTTCCCTCAACAGGAGATAGTAGGAGTGTTCATGAG
EW730045       <-- ATGGAGAATGGAGATTTCCCTCAACAGGAGATAGTAGGAGTGTTCATGAG
FD553179       <-- ATGGAGAATGGAGATTTCCCTCAACAGGAGATAGTAGGAGTGTTCATGAG
FD536694       <-- ATGGAGAATGGAGATTTCCCTCAACAGGAGATAGTAGGAGTGTTCATGAG
EX888622       --> ..................................................
EY922978       --> ATGGAGAATGGAGATTTCCCTCAACAGGAGATAGTAGGAGTGTTCATGAG
FD556976       --> ATGGAGAATGGAGATTTCCCTCAACAGGAGATAGTAGGAGTGTTCATGAG
FD571600       --> ATGGAGAATGGAGATTTCCCTCAACAGGAGATAGTAGGAGTGTTCATGAG
EW725506       --> ATGGAGAATGGAGATTTCCCTCAACAGGAGATAGTAGGAGTGTTCATGAG
FD941534       --> ATGGAGAATGGAGATTTCCCTCAACAGGAGATAGTAGGAGTGTTCATGAG

               1101   -   1151
UN16923        --> GAATTGCTTGATACACTATGCTACCTACAGAAACACTTTCCCATTATGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542466       <-- GAATTGCTTGATACACTATGCTACCTACAGAAACACTTTCCCATTATGGG
EY901703       <-- GAATTGCTTGATACACTATGCTACCTACAGAAATACTTTCCCATTATGGG
EY918833       <-- GAATTGCTTGATACACTATGCTACCTACAGAAACACTTTCCCATTATGGG
FD567212       <-- GAATTGCTTGATACACTATGCTACCTACAGAAACACTTTCCCATTATGGG
EW730045       <-- GAATTGCTTGATACACTATGCTACCTACAGAAACACTTTCCCATTATGGG
FD553179       <-- GAATTGCTTGATACACTATGCTACCTACAGAAACACTTTCCCATTATGGG
FD536694       <-- GAATTGCTTGATACACTATGCTACCTACAGAAACACTTTCCCATTATGGG
EX888622       --> ..................................................
EY922978       --> GAATTGCTTGATACACTATGCTACCTACAGAAACACTTTCCCATTATGGG
FD556976       --> GAATTGCTTGATACACTATGCTACCTACAGAAACACTTTCCCATTATGGG
FD571600       --> GAATTGCTTGATACACTATGCTACCTACAGAAACACTTTCCCATTATGGG
EW725506       --> GAATTGCTTGATACACTATGCTACCTACAGAAACACTTTCCCATTATGGG
FD941534       --> GAATTGCTTGATACACTATGCTACCTACAGAAACACTTTCCCATTATGGG

               1151   -   1201
UN16923        --> CACTTGCTGAGTACCGGAAAGCTACCTTCCCAATCCAAACTCAACAACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542466       <-- CACTTGCTGAGTACCGGAAAGCTACCTTCCCAATCCAAACTCAACAACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901703       <-- CACTTGCTGAGTACCGGAAAGCTACCTTCCCAATCCAAACTCAACAACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY918833       <-- CACTTGCTGAGTACCGAAAAGCTACCTTCCCAATCCCAGCTCAACAACAT  Raphanus raphanistrum subsp. landra
FD567212       <-- CACTTGCTGAGTACCGGAAAGCTACCTTCCCAATCCAAACTCAACAACAT  Raphanus sativus var. oleiformis
EW730045       <-- TACTTGCTGAGTACCGGAAAGCTACCTTCCCAATCCAAACTCAACAACAT  Raphanus sativus cv Early Scarlet Globe
FD553179       <-- CACTTGCTGAGTACCGAAAAGCTACCTTCCCAATCCCAGCTCAACAACAT  Raphanus raphanistrum subsp. landra
FD536694       <-- CAC...............................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX888622       --> ..................................................  Raphanus sativus var. oleiformis
EY922978       --> CACTTGCTGAGTACCGAAAAGCTACCTTCCCAATCCCAGCTCAACAACAT  Raphanus raphanistrum subsp. landra
FD556976       --> CACTTGCTGAGTACCGAAAAGCTACCTTCCCAATCCCAGCTCAACAACAT  Raphanus raphanistrum subsp. landra
FD571600       --> CACTTGCTGAGTACCGGAAAGCTACCTTCCCAATCCAAACTCAACAACAT  Raphanus sativus cv Early Scarlet Globe
EW725506       --> TACTTGCTGAGTACCGGAAAGCTACCTTCCCAATCCAAACTCAACAACAT  Raphanus sativus cv Early Scarlet Globe
FD941534       --> CACTTGCTGAGTACCGGAAAGCTACCTTCCCAATCCAAACTCAACAACAT  Raphanus sativus var. oleiformis

               1201   -   1251
UN16923        --> CATCTTCAGCTTCCTTAGTAAA-TGTTTACAGATTATAGATAAAAA--GA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542466       <-- CATCTTCAGCTTCCTTAGTAAAATGTTTACAGATTATAGATAAAAAAAGA
EY901703       <-- CATCTTCAGCTTCCTTAGTAAAATGTTTACAGATTATAGATAAAAAAAGA
EY918833       <-- CATCTTCAGCTTCCTTAGTAAA-TGTTTACAGATTATAGATAAAAA--GA
FD567212       <-- CATCTTCAGCTTCCTTAGTAAA-TGTTTACAGATTATAGATAAAAA--GA
EW730045       <-- CATCTTCAGCTTCCTTAGTAAA-TGTTTACAGATTATAGATAAAAA--GA
FD553179       <-- CATCTTCAGCTTCCTTAGTAAA-TGTTTACAGATTATAGATAAAAA--GA
FD536694       <-- ..................................................
EX888622       --> ..................................................
EY922978       --> CATCTTCAGCTTCCTTAGTAA--TGTTTACAGATTATAGATA........
FD556976       --> CATCTTCAGCTTCCTTAGTAAA-TGTTTACAGATTATAGATAAAAA--GA
FD571600       --> CATCTTCAGCTTCCTTAGTAAA-TGTTTACAGATTATAGATAAAAA--GA
EW725506       --> CATCTTCAGCTTCCTTAGTAAA-TGTTTACAGATTATAGATAAAAA--GA
FD941534       --> CATCTTCAGCTTCCTTAGTAAA-TGTTTACAGATTATAGATAAAAA--GA

               1251   -   1301
UN16923        --> ACAAAACAATGTCTACATAT-GGATGAAATCTCCTGTGTCTTTGGCTACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542466       <-- ACAAAACAATGTCTACATATAAGATGAAATCTCCTGTGTCTTTGGCTACT
EY901703       <-- ACAAAACAATGTCTACATATAAGATGAAATCTCCTGTGTCTTTGGCTACT
EY918833       <-- ACAAAACAATGTCTACATAT-GGATGAAATCTCCTGTGTCTTTGGCTACT
FD567212       <-- ACAAAACAATGTCTACATAT-GGATGAAATCTCCTGCGTCTTTGGCTACT
EW730045       <-- ACAAAACAATGTCTACATAT-GGATGAAATCTCCTGTGTCTTTGGCTACT
FD553179       <-- ACAAAACAATGTCTACATAT-GGATGAAATCTCCTGTGTCTTTGGCTACT
FD536694       <-- ..................................................
EX888622       --> ..................................................
EY922978       --> ..................................................
FD556976       --> ACAAAACAATGTCTACATAT-GGATGAAATCTCCTGTGTCTTTGGCTACT
FD571600       --> ACAAAACAATGTCTACATAT-GGATGAAATCTCCTGTGTCTTTGGCTACT
EW725506       --> ACAAAACAATGTCTACATAT-GGATGAAATCTCCTGTGTCTTTGGCTACT
FD941534       --> ACAAAACAATGTCTACATAT-GGATGAAATCTCCTGTGTCTTTGGCTACT

               1301   -   1351
UN16923        --> TATTCAGATGTATGTTTATTCAGCAAAA-GTAAACGAATAATAATATAA-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542466       <-- TATTCAGATGTATGTTTATTCAGCAAAACGTGAACGAATAATAATATAAA
EY901703       <-- TATTCAGATGTATGTTTATTCAGCAAAACGTAAACGAATAATAATATAAA
EY918833       <-- TATTCAGATGTATGTTTATTCAGCAAAA-GTAAACGAATAATAATATAA-
FD567212       <-- TATTCAGATGTATGTTTATTCAGCAAAA-GTAAACGAATAATAATATAA-
EW730045       <-- TATTCAGATGTATGTTTATTCAGCAAAA-GTAAACGAATAATAATATAA-
FD553179       <-- TATTCAGATGTATGTTTATTCAGCAAAA-GTAAACGAATAATAATATAA-
FD536694       <-- ..................................................
EX888622       --> ..................................................
EY922978       --> ..................................................
FD556976       --> TATTCAGATGTATGTTTATTCAGCAAAA-GTAAACGAATAATAATATAA-
FD571600       --> TATTCAGATGTATGTTTATTCAGCAAAA-GTAAACGAATAATAATATAA-
EW725506       --> TATTCAGATGTATGTTTATTCAGCAAAA-GTAAACGAATAATAATATAA-
FD941534       --> TATTCAGATGTATGTTTATTCAGCAAAA-GTAAACGAATAATAATGTAA-

               1351   -   1401
UN16923        --> TATGTCTCCTCTGTTTTTGGGCTAACTTTTATTTTTTTTTAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542466       <-- TATGTCTC....................................
EY901703       <-- TATGTCTCCTCTGc..............................
EY918833       <-- TATGTCTCCTCTGTTTTTGG-CTAACTTTTATTTTTTTTTAACC
FD567212       <-- TATGTC......................................
EW730045       <-- TATGTC......................................
FD553179       <-- TATGTCTCCTCTGTTTTTGGGC......................
FD536694       <-- ............................................
EX888622       --> ............................................
EY922978       --> ............................................
FD556976       --> TATGTCTCCTCTGTTTTgggc.......................
FD571600       --> TATGTCTC....................................
EW725506       --> TATGTC......................................
FD941534       --> TATGTC......................................