RadishBase

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Alignment for radish unigene UN16934

               1      -     51
UN16934        --> GGAAGAAGACAAAAGTGTCTCTAGGGATTGGCTTTACATTGTGCACAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959835       <-- ..................................................
EY910263       <-- ..................................................
EY912326       <-- ..................................................
FY430878       <-- ..................................................
EW733153       <-- ..................................................
EX753986       <-- ..................................................
EY929638       <-- ..................................................
EV536298       <-- ..................................................
EY905655       <-- ..................................................
FD972789       <-- ..................................................
EY916682       --> GGAAGAAGACAAAAGTGTCTCTAGGGATTGGCTTTACATTGTGCACAGAA
EY914165       --> ..................................................
FD963560       --> ..................................................
FD573884       --> ..................................................
EY926018       --> ..................................................
EY928921       --> ..................................................
EY902037       --> ..................................................
FD968606       --> ..................................................
EV540779       --> ..................................................
EV542101       --> ..................................................
FD530587       --> ..................................................
FD985371       --> ..................................................
EX758409       --> ..................................................
EW721910       --> ..................................................
EW737798       --> ..................................................

               51     -    101
UN16934        --> ACTCAAGTCAAAATCAAAGTCCAAAAGAAAACAAAACGACAGAACCCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959835       <-- ..................................................
EY910263       <-- ..................................................
EY912326       <-- ..................................................
FY430878       <-- ..................................................
EW733153       <-- ..................................................
EX753986       <-- ..................................................
EY929638       <-- ..................................................
EV536298       <-- ..................................................
EY905655       <-- ..................................................
FD972789       <-- ..................................................
EY916682       --> ACTCAAGTCAAAATCAAAGTCCAAAAGAAAACAAAACGACAGAACCCTCC
EY914165       --> .............ggAAAGTCCAAAAGAAAACAAAACGACAGAACCCTCC
FD963560       --> ..................................................
FD573884       --> ..................................................
EY926018       --> ..................................................
EY928921       --> ..................................................
EY902037       --> ..................................................
FD968606       --> ..................................................
EV540779       --> ..................................................
EV542101       --> ..................................................
FD530587       --> ..................................................
FD985371       --> ..................................................
EX758409       --> ..................................................
EW721910       --> ..................................................
EW737798       --> ..................................................

               101    -    151
UN16934        --> TCCTATCTTCTCTCTCTCGATCTACACAATGGACTCTCTCGTTGCTCAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959835       <-- ..................................................
EY910263       <-- ..................................................
EY912326       <-- ..................................................
FY430878       <-- ..................................................
EW733153       <-- ..................................................
EX753986       <-- ..................................................
EY929638       <-- ..................................................
EV536298       <-- ..................................................
EY905655       <-- ..................................................
FD972789       <-- ..................................................
EY916682       --> TCCTATCTTCTCTCTCTCGATCTACACAATGGACTCTCTCGTTGCTCAGC
EY914165       --> TCCTATCTTCTCTCTCTCGATCTACACAATGGACTCTCTCGTTGCTCAGC
FD963560       --> ....................gggACACAATGGACTCTCTCGTTGCTCAGC
FD573884       --> ..................................................
EY926018       --> ..................................................
EY928921       --> ..................................................
EY902037       --> ..................................................
FD968606       --> ..................................................
EV540779       --> ..................................................
EV542101       --> ..................................................
FD530587       --> ..................................................
FD985371       --> ..................................................
EX758409       --> ..................................................
EW721910       --> ..................................................
EW737798       --> ..................................................

               151    -    201
UN16934        --> TACAGATGCAATACCGTAACTATGTCCTTTCTCTCTACCAACAGGGCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959835       <-- ..........................................AGGGCTTT
EY910263       <-- ..................................................
EY912326       <-- ..................................................
FY430878       <-- ..................................................
EW733153       <-- ..................................................
EX753986       <-- ..................................................
EY929638       <-- ..................................................
EV536298       <-- ..................................................
EY905655       <-- ..................................................
FD972789       <-- ..................................................
EY916682       --> TACAGATGCAATACCGTAACTATGTCCTTTCTCTCTACCAACAGGGCTTT
EY914165       --> TACAGATGCAATACCGTAACTACGTCCTTTCTCTCTACCAACAGGGCTTT
FD963560       --> TACAGATGCAATACCGTAACTATGTCCTTTCTCTCTACCAACAGGGCTTT
FD573884       --> ..................................................
EY926018       --> ..................................................
EY928921       --> ..................................................
EY902037       --> ..................................................
FD968606       --> ..................................................
EV540779       --> ..................................................
EV542101       --> ..................................................
FD530587       --> ..................................................
FD985371       --> ..................................................
EX758409       --> ..................................................
EW721910       --> ..................................................
EW737798       --> ..................................................

               201    -    251
UN16934        --> CTGGATGATCAGTTTACTGAGTTAAAAAGTCTACAAGATGATGGAAGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959835       <-- CTGGATGATCAGTTTACTGAGTTAAAAAGTCTACAAGATGATGGAAGTCC
EY910263       <-- ..................................................
EY912326       <-- ..................................................
FY430878       <-- ..................................................
EW733153       <-- ..................................................
EX753986       <-- ..................................................
EY929638       <-- ..................................................
EV536298       <-- ..................................................
EY905655       <-- ..................................................
FD972789       <-- ..................................................
EY916682       --> CTGGATGATCAGTTTACTGAGTTAAAAAGTCTACAAGATGATGGAAGTCC
EY914165       --> CTGGATGATCAGTTTACTGAGTTAAAAAGTCTACAAGATGATGGAAGTCC
FD963560       --> CTGGATGATCAGTTTACTGAGTTAAAAAGTCTACAAGATGATGGAAGTCC
FD573884       --> ..................................................
EY926018       --> ..................................................
EY928921       --> ..................................................
EY902037       --> ..................................................
FD968606       --> ..................................................
EV540779       --> ..................................................
EV542101       --> ..................................................
FD530587       --> ..................................................
FD985371       --> ..................................................
EX758409       --> ..................................................
EW721910       --> ..................................................
EW737798       --> ..................................................

               251    -    301
UN16934        --> TGATTTTGTGTCTGAGGTTCTCTCTCTCTTCTTTGACGATTGTGTCAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959835       <-- TGATTTTGTGTCTGAGGTTCTCTCTCTCTTCTTTGACGATTGTGTCAAGC
EY910263       <-- ............................tttTTTGACGATTGTGTCAAGC
EY912326       <-- ..................................................
FY430878       <-- ..................................................
EW733153       <-- ..................................................
EX753986       <-- ..................................................
EY929638       <-- ..................................................
EV536298       <-- ..................................................
EY905655       <-- ..................................................
FD972789       <-- ..................................................
EY916682       --> TGATTTTGTGTCTGAGGTTCTCTCTCTCTTCTTTGACGATTGTGTCAAGC
EY914165       --> TGATTTTGTGTCTGAGGTTCTCTCTCTCTTCTTTGACGATTGTGTCAAGC
FD963560       --> TGATTTTGTGTCTGAGGTTCTCTCTCTCTTCTTTGACGATTGTGTCAAGC
FD573884       --> ..................................................
EY926018       --> ..................................................
EY928921       --> ..................................................
EY902037       --> ..................................................
FD968606       --> ..................................................
EV540779       --> ..................................................
EV542101       --> ..................................................
FD530587       --> ..................................................
FD985371       --> ..................................................
EX758409       --> ..................................................
EW721910       --> ..................................................
EW737798       --> ..................................................

               301    -    351
UN16934        --> TTGTCGGTAACATGGCTAGAGCTTTGGACCAGACAGGAACTGTAGATTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959835       <-- TTGTCGGTAACATGGCTAGAGCTTTGGACCGGACAGGAACTGTAGATTTT
EY910263       <-- TTGTCGGTAACATGGCTAGAGCTTTGGACCAGACAGGAACTGTAGATTTT
EY912326       <-- .....................................AACTGTAGATTTT
FY430878       <-- ..................................................
EW733153       <-- ..................................................
EX753986       <-- ..................................................
EY929638       <-- ..................................................
EV536298       <-- ..................................................
EY905655       <-- ..................................................
FD972789       <-- ..................................................
EY916682       --> TTGTCGGTAACATGGCTAGAGCTTTGGACCAGACAGGAACTGTAGATTTT
EY914165       --> TTGTCGGTAACATGGCTAGAGCTTTGGACCAGACAGGAACTGTAGATTTT
FD963560       --> TTGTCGGTAACATGGCTAGAGCTTTGGACCGGACAGGAACTGTAGATTTT
FD573884       --> ..................................................
EY926018       --> ..................................................
EY928921       --> ..................................................
EY902037       --> ..................................................
FD968606       --> ..................................................
EV540779       --> ..................................................
EV542101       --> ..................................................
FD530587       --> ..................................................
FD985371       --> ..................................................
EX758409       --> ..................................................
EW721910       --> ..................................................
EW737798       --> ..................................................

               351    -    401
UN16934        --> AGTCAGGTTGGTGCTAGTGTGCATCAGTTGAAGGGTAGTAGCTCAAGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959835       <-- AGTCAGGTTGGTGCTAGTGTGCATCAGTTGAAGGGTAGTAGCTCAAGTGT
EY910263       <-- AGTCAGGTTGGTGCTAGTGTGCATCAGTTGAAGGATAGTAGCTCAAGTGT
EY912326       <-- AGTCAGGTTGGTGCTAGTGTGCATCAGTTGAAGGGTAGTAGCTCAAGTGT
FY430878       <-- ..................................................
EW733153       <-- ..................................................
EX753986       <-- ..................................................
EY929638       <-- ..................................................
EV536298       <-- ..................................................
EY905655       <-- ..................................................
FD972789       <-- ..................................................
EY916682       --> AGTCAGGTTGGTGCTAGTGTGCATCAGTTGAAGGGTAGTAGCTCAAGTGT
EY914165       --> AGTCAGGTTGGTGCTAGTGTGCATCAGTTGAAGGATAGTAGCTCAAGTGT
FD963560       --> AGTCAGGTTGGTGCTAGTGTGCATCAGTTGAAGGGTAGTAGCTCAAGTGT
FD573884       --> ..................................................
EY926018       --> ..................................................
EY928921       --> ..................................................
EY902037       --> ..................................................
FD968606       --> ..................................................
EV540779       --> ..................................................
EV542101       --> ..................................................
FD530587       --> ..................................................
FD985371       --> ..................................................
EX758409       --> ..................................................
EW721910       --> ..................................................
EW737798       --> ..................................................

               401    -    451
UN16934        --> TGGTGCCAAGAGGGTCAAAGGCTTGTGTATTAACTTCAAGGAACTTTGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959835       <-- TGGTGCCAAGAGGGTCAAAGGCTTGTGTATTAACTTCAAGGAACTTTGTG
EY910263       <-- TGGTGCCAAGAGGGTCAAAGGCTTGTGTATTAACTTCAAGGAACTTTGTG
EY912326       <-- TGGTGCCAAGAGGGTCAAAGGCTTGTGTATTAACTTCAAGGAACTTTGTG
FY430878       <-- ..................................................
EW733153       <-- ..................................................
EX753986       <-- ..................................................
EY929638       <-- ..................................................
EV536298       <-- ..................................................
EY905655       <-- ..................................................
FD972789       <-- ..................................................
EY916682       --> TGGTGCCAAGAGGGTCAAAGGCTTGTGTATTAACTTCAAGGAACTTTGTG
EY914165       --> TGGTGCCAAGAGGGTCAAAGGCTTGTGTATTAACTTCAAGGAACTTTGTG
FD963560       --> TGGTGCCAAGAGGGTCAAAGGCTTGTGTATTAACTTCAAGGAACTTTGTG
FD573884       --> ..................................................
EY926018       --> ..................................................
EY928921       --> ..................................................
EY902037       --> ..................................................
FD968606       --> ..................................................
EV540779       --> ..................................................
EV542101       --> ..................................................
FD530587       --> ..................................................
FD985371       --> ..................................................
EX758409       --> ..................................................
EW721910       --> ..................................................
EW737798       --> ..................................................

               451    -    501
UN16934        --> AGGCTAAGAACTACGAAGGGTGTGTGAGGTGTCTGCAGCAAGTGGATATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959835       <-- AGGCTAAGAACTACGAAGGGTGTGTGAGGTGTCTGCAGCAAGTGGATATC
EY910263       <-- AGGCTAAGAACTACGAAGGGTGTGTGAGGTGTTTGCAGCAAGTGGATATC
EY912326       <-- AGGCTAAGAACTACGAAGGGTGTGTGAGGTGTCTGCAGCAAGTGGATATC
FY430878       <-- ..................................................
EW733153       <-- ..................................................
EX753986       <-- ..................................................
EY929638       <-- ..................................................
EV536298       <-- ..................................................
EY905655       <-- ..................................................
FD972789       <-- ..................................................
EY916682       --> AGGCTAAGAACTACGAAGGGTGTGTGAGGTGTCTGCAGCAAGTGGATATC
EY914165       --> AGGCTAAGAACTACGAAGGGTGTGTGAGGTGTCTGCAGCAAGTGGATATC
FD963560       --> AGGCTAAGAACTACGAAGGGTGTGTGAGGTGTCTGCAGCAAGTGGATATC
FD573884       --> ..................................................
EY926018       --> ..................................................
EY928921       --> ..................................................
EY902037       --> ..................................................
FD968606       --> ..................................................
EV540779       --> ..................................................
EV542101       --> ..................................................
FD530587       --> ..................................................
FD985371       --> ..................................................
EX758409       --> ..................................................
EW721910       --> ..................................................
EW737798       --> ..................................................

               501    -    551
UN16934        --> GAGTACAAGACGTTAAAGGCAAAGCTTCAAGATATGTTCAATCTTGAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959835       <-- GAGTACAAGACGTTAAAGGCAAAGCTTCAAGATATGTTCAATCTTGAAAA
EY910263       <-- GAGTACAAGACGTTAAAGGCAAAGCTTCAAGATATGTTCAATCTTGAAAA
EY912326       <-- GAGTACAAGACGTTAAAGGCAAAGCTTCAAGATATGTTCAATCTTGAAAA
FY430878       <-- ..................................................
EW733153       <-- ..................................................
EX753986       <-- ..................................................
EY929638       <-- ..................................................
EV536298       <-- ..................................................
EY905655       <-- ..................................................
FD972789       <-- ..................................................
EY916682       --> GAGTACAAGACGTTAAAGGCAAAGCTTCAAGATATGTTCAATCTTGAAAA
EY914165       --> GAGTACAAGACGTTAAAGGCAAAGCTTCAAGATATGTTCAATCTTGAAAA
FD963560       --> GAGTACAAGACGTTAAAGGCAAAGCTTCAAGATATGTTCAATCTTGAAAA
FD573884       --> ..................................................
EY926018       --> ..................................................
EY928921       --> ..................................................
EY902037       --> ..................................................
FD968606       --> ..................................................
EV540779       --> ..................................................
EV542101       --> ..................................................
FD530587       --> ..................................................
FD985371       --> ..................................................
EX758409       --> ..................................................
EW721910       --> ..................................................
EW737798       --> ..................................................

               551    -    601
UN16934        --> ACAAATCGTTCAAGCTGGTGGTATCGTTCCTCAAGTGGATATAAAATAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959835       <-- ACAAATCGTTCAAGCTGGTGGTATCGTTCCTCAAGTGGATATAAAATAAA
EY910263       <-- ACAAATCGTTCAAGCTGGTGGTATCGTTCCTCAAGTGGATATAAAATAAA
EY912326       <-- ACAAATCGTTCAAGCTGGTGGTATCGTTCCTCAAGTGGATATAAAATAAA
FY430878       <-- ..................................................
EW733153       <-- ..................................................
EX753986       <-- ..................................................
EY929638       <-- ..................................................
EV536298       <-- ..................................................
EY905655       <-- ..................................................
FD972789       <-- ..................................................
EY916682       --> ACAAATCGTTCAAGCTGGTGGTATCGTTCCTCAAGTGGATATAAAATAAA
EY914165       --> ACAAATCGTTCAAGCTGGTGGTATCGTTCCTCAAGTGGATATAAAATAAA
FD963560       --> ACAAATCGTTCAAGCTGGTGGTATCGTTCCTCAAGTGGATATAAAATAAA
FD573884       --> ..................................................
EY926018       --> ..................................................
EY928921       --> ..................................................
EY902037       --> ..................................................
FD968606       --> ..................................................
EV540779       --> ..................................................
EV542101       --> ..................................................
FD530587       --> ..................................................
FD985371       --> ..................................................
EX758409       --> ..................................................
EW721910       --> ..................................................
EW737798       --> ..................................................

               601    -    651
UN16934        --> AGACTTGTTCCTCACTTGTGATACTCTCTGGTGGATGAAGAGAAGAACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959835       <-- AGACTTGTTCCTCACTTGTGATACTCTCTGGTGGATGAAGAGAAGAACAA
EY910263       <-- AGACTTGTTCCTCACTTGTGATACTCTTTGGTGGATGAAGAGAAGAACAA
EY912326       <-- AGACTTGTTCCTCACTTGTGATACTCTCTGGTGGATGAAGAGAAGAACAA
FY430878       <-- ..................................................
EW733153       <-- ..................................................
EX753986       <-- ..................................................
EY929638       <-- ..................................................
EV536298       <-- ..................................................
EY905655       <-- ..................................................
FD972789       <-- ..................................................
EY916682       --> AGACTTGTTCCTCACTTGTGATACTCTCTGGTGGATGAAGAGAA......
EY914165       --> AGACTTGTTCCTCACTTGTGATACTCTCTGGTGGATGAAGAGAAGAACAA
FD963560       --> AGACTTGTTCCTCACTTGTGATACTCTCTGGTGGATGAAGAGAAGAACAA
FD573884       --> ..................................................
EY926018       --> ..................................................
EY928921       --> ..................................................
EY902037       --> ..................................................
FD968606       --> ..................................................
EV540779       --> ..................................................
EV542101       --> ..................................................
FD530587       --> ..................................................
FD985371       --> ..................................................
EX758409       --> ..................................................
EW721910       --> ..................................................
EW737798       --> ..................................................

               651    -    701
UN16934        --> GATGATGATGATGGCTCAAATTTGCATTCTTCAGTTTTTTTTTATTTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959835       <-- GATGATGATGATGGCTCAAATTTGCATTCTTCAGTTTTTTTTTATTTGTT
EY910263       <-- GATGATGATGATGGCTCAAATTTGCATTCTTCAGTTTTTTTTTATTTGTT
EY912326       <-- GATGATGATGATGGCTCAAATTTGCATTCTTCAGTTTTTTTTTATTTGTT
FY430878       <-- ..................................................
EW733153       <-- ..................................................
EX753986       <-- ..................................................
EY929638       <-- ..................................................
EV536298       <-- ..................................................
EY905655       <-- ..................................................
FD972789       <-- ..................................................
EY916682       --> ..................................................
EY914165       --> GATGATGATGATGGCTCAAATTTGCATTCTTCAGTTTTTTTT-ATTTGTT
FD963560       --> GATGATGATGATGGCTCAAATTTGCATTCTTCAGTTTTTTTTTATTTGTT
FD573884       --> ..................................................
EY926018       --> ..................................................
EY928921       --> ..................................................
EY902037       --> ..................................................
FD968606       --> ..................................................
EV540779       --> ..................................................
EV542101       --> ..................................................
FD530587       --> ..................................................
FD985371       --> ..................................................
EX758409       --> ..................................................
EW721910       --> ..................................................
EW737798       --> ..................................................

               701    -    751
UN16934        --> TATTTAGAAGAAACTCAAAAAGAATGTTTGGGAGGAAAAGAGAGAAGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959835       <-- TATTTAGAAGAAACTCAAAAAGAATGTTTGGGAGGAAAAGAGAGAAGTGA
EY910263       <-- TATTTAGAAGAAACTCAAAAAGAATGTTTGGGAGGAAAAGAGAGAGGTGA
EY912326       <-- TATTTAGAAGAAACTCAAAAAGAATGTTTGGGAGGAAAAGAGAGAAGTGA
FY430878       <-- ..................................................
EW733153       <-- ..................................................
EX753986       <-- ..................................................
EY929638       <-- ..................................................
EV536298       <-- ..................................................
EY905655       <-- ..................................................
FD972789       <-- ..................................................
EY916682       --> ..................................................
EY914165       --> TATTTAGAAGAAACTCAAAAAGA-TGTTTGGGAGGAAA-GAGAGA-GTGA
FD963560       --> TATTTAGAAGAAACTCAAAAAGAATGTTTGGGAGGAAAAGAGAGAAGTGA
FD573884       --> ..................................................
EY926018       --> ..................................................
EY928921       --> ..................................................
EY902037       --> ..................................................
FD968606       --> ..................................................
EV540779       --> ..................................................
EV542101       --> ..................................................
FD530587       --> ..................................................
FD985371       --> ..................................................
EX758409       --> ..................................................
EW721910       --> ..................................................
EW737798       --> ..................................................

               751    -    801
UN16934        --> TGATTCTTGTTGATAAAGCTACTTTTCCATTTGTCAATCAAAAGATCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959835       <-- TGATTCTTGTTGATAAAGCTACTTTTCCATTTGTCAATCAAAAGATCTTT  Raphanus raphanistrum subsp. maritimus
EY910263       <-- TGATTCTTGTTTATAAAGCTACTTTTCCATT-GTCAATC...........  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912326       <-- TGATTCTTGTTGATAAAGCTACTTTTCCATTTGTC...............  Raphanus raphanistrum subsp. raphanistrum (NY)
FY430878       <-- ..................................................  Raphanus sativus cv GSK3-1
EW733153       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX753986       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY929638       <-- ..................................................  Raphanus sativus var. oleiformis
EV536298       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905655       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972789       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY916682       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914165       --> TGATTCTTGTTTATAAAGCTACTTTTCattgtcatc..............  Raphanus raphanistrum subsp. raphanistrum (NY)
FD963560       --> TGATTCTTGTTGATAAAGCTACTTTTCCATTTGTCAATCAAAAGATCTTT  Raphanus raphanistrum subsp. maritimus
FD573884       --> ........gcTGATAAAGCTACTTTTCATTTTGTCAGTCAAAAGATCTTT  Raphanus sativus cv Early Scarlet Globe
EY926018       --> ...........GATAAAGCTACTTTTTCATTTGTCAATCAAAAGATCTTT  Raphanus sativus var. oleiformis
EY928921       --> ...........GATAAAGCTACTTTTCATTTTGTCAGTCAAAAGATCTTT  Raphanus sativus var. oleiformis
EY902037       --> .........................ttCATTTGTCAATCAAAAGATCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968606       --> .........................ttCATTTGTCAATCAAAAGATCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540779       --> ................................GTCAATCAAAAGATCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542101       --> ...............................cGTCAATCAAAAGATCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530587       --> ................................GTCAATCAAAAGATCTTT  Raphanus raphanistrum subsp. maritimus
FD985371       --> ................................GTCAGTCAAAAGATCTTT  Raphanus raphanistrum subsp. landra
EX758409       --> ................................gcCAATCAAAAGATCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW721910       --> ....................................gTCAAAAGATCTTT  Raphanus sativus var. oleiformis
EW737798       --> .................................................c  Raphanus sativus cv Rat-Tail Radish #3870

               801    -    851
UN16934        --> TAATAAGTTTAGATAACAGAGCCAGTTTGAGGTCCAATAAGACCAACAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959835       <-- -AATAAGTTT........................................  Raphanus raphanistrum subsp. maritimus
EY910263       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912326       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY430878       <-- ..................................................  Raphanus sativus cv GSK3-1
EW733153       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX753986       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY929638       <-- ..................................................  Raphanus sativus var. oleiformis
EV536298       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905655       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972789       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY916682       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914165       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD963560       --> -AATAAGTTT........................................  Raphanus raphanistrum subsp. maritimus
FD573884       --> TAATAAGTTTAGATAACAGAGCCAGTTTGAGGTCCAATAAGACCAACAAC  Raphanus sativus cv Early Scarlet Globe
EY926018       --> -AATAAGTTTAGATAACAGAGCCAGTTTGAGGTCCAATAAGACCAACAAC  Raphanus sativus var. oleiformis
EY928921       --> TAATAAGTTTAGATAACAGAGCCAGTTTGAGGTCCAATAAGACCAACAAC  Raphanus sativus var. oleiformis
EY902037       --> TAATAAGTTTAGATAACAGAGCCAGTTTGAGGTCCAATAAGACCAACAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968606       --> TAATAAGTTTAGATAACAGAGCCAGTTTGAGGTCCAATAAGACCAACAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540779       --> TAATAAGTTTAGATAACAGAGCCAGTTTGAGGTCCAATAAGACCAACAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542101       --> TAATAAGTTTAGATAACAGAGCCAGTTTGAGGTCCAATAAGACCAACAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530587       --> -AATAAGTTTAGATAACAGAGCCAGTTTGAGGTCCAATAAGACCAACAAC  Raphanus raphanistrum subsp. maritimus
FD985371       --> TAATAAGTTTAGATAACAGAGCCAGTTTGAGGTCCAATAAGACCAACAAC  Raphanus raphanistrum subsp. landra
EX758409       --> TAATAAGTTTAGATAACAGAGCCAGTTTGAGGTCCAATAAGACCAACAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW721910       --> TAATAAGTTTAGATAACAGAGCCAGTTTGAGGTCCAATAAGACCAACAAC  Raphanus sativus var. oleiformis
EW737798       --> tttTAAGTTTAGATAACAGAGCCAGTTTGAGGTCCAATAAGACCAACAAC  Raphanus sativus cv Rat-Tail Radish #3870

               851    -    901
UN16934        --> CTCATCCCAAAGACCTTGACTTTGTACAACCGAACCAAGCTCAACAACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959835       <-- ..................................................
EY910263       <-- ..................................................
EY912326       <-- ..................................................
FY430878       <-- ..................................................
EW733153       <-- ..................................................
EX753986       <-- ..................................................
EY929638       <-- ..................................................
EV536298       <-- ..................................................
EY905655       <-- ..................................................
FD972789       <-- ..................................................
EY916682       --> ..................................................
EY914165       --> ..................................................
FD963560       --> ..................................................
FD573884       --> CTCATCCCAAAGACCTTGACTTTGTACAGCCGAACCAAGCTCAACAACAC
EY926018       --> CTCATCCCAAAGACCTTGACTTTGTACAACCGAACCAAGCTCAACAACAC
EY928921       --> CTCATCCCAAAGACCCTGACTTTGTACTACCGAACCAAGCTCAACAACAC
EY902037       --> CTCATCCCAAAGACCTTGACTTTGTACAACCGAACCAAGCTCAACAACAC
FD968606       --> CTCATCCCAAAGACCTTGACTTTGTACAACCGAACCAAGCTCAACAACAC
EV540779       --> CTCATCCCAAAGACCTTGACTTTGTACAACCGAACCAAGCTCAACAACAC
EV542101       --> CTCATCCCAAAGACCTTGACTTTGTACAACCGAACCAAGCTCAACAACAC
FD530587       --> CTCATCCCAAAGACCTTGACTTTGTACAACCGAACCAAGCTCAACAACAC
FD985371       --> C-CATCCCAAAGACCTTGACTTTGTACAACCGAACCAAGCTCAACAACAC
EX758409       --> CTCATCCCAAAGACCTTGACTTTGTACAACCGAACCAAGCTCAACAACAC
EW721910       --> CTCATCCCAAAGACCTTGACTTTGTACAACCGAACCAAGCTCAACAACAC
EW737798       --> CTCATCCCAAAGACCTTGACTTTGTACAACCGAACCAAGCTCAACAACAC

               901    -    951
UN16934        --> TCAAGCTACAAGCAGCTACAGTCCAGTACCCACCCAACACCTCTGCTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959835       <-- ..................................................
EY910263       <-- ..................................................
EY912326       <-- ..................................................
FY430878       <-- ..................................................
EW733153       <-- ..................................................
EX753986       <-- ..................................................
EY929638       <-- ..................................................
EV536298       <-- ..................................................
EY905655       <-- ..................................................
FD972789       <-- ..................................................
EY916682       --> ..................................................
EY914165       --> ..................................................
FD963560       --> ..................................................
FD573884       --> TCAAGCTACAAGCAGCTACAGTCCAGTACCCACCCAACACCTCTGCTTCC
EY926018       --> TCAAGCTACAAGCAGCTACAGTCCAGTACCCACCCAACACCTCTGCTTTC
EY928921       --> TCAAGCTACAAGCAGCTACAGTCCAGTACCCACCCAACACCTCTGCTTTC
EY902037       --> TCAAGCCACAAGCAGCTACAGTCCAGTACCCACCCAACACCTCTGCTCTC
FD968606       --> TCAAGCCACAAGCAGCTACAGTCCAGTACCCACCCAACACCTCTGCTCTC
EV540779       --> TCAAACCACAAGCAGCTACAGTCCAGTACCCACCCAACACCTCTGCTCTC
EV542101       --> TCAAGCTACAAGCAGCTACAGTCCAGTACCCACCCAATACCTCTGCTTTC
FD530587       --> TCAAGCTACAAGTAGCTACAGTCCAGTACCCACCCAACACCTCTGCTTTC
FD985371       --> TCAAGCTACAAGCAGCTACAGTCCAGTACCCACCCAACACCTCTGCTTTC
EX758409       --> TCAAGCCACAAGCAGCTACAGTCCAGTACCCACCCAACACCTCTGCTCTC
EW721910       --> TCAAGCTACAAGCAGCTACAGTCCAGTACCCACCCAACACCTCTGCTTTC
EW737798       --> TCAAGCTACAAGCAACTACAGTCCAGTACCCACCCAACACCTCTGCTTTC

               951    -   1001
UN16934        --> AACTGCTCTTTCTCCCAACCACAATACCCATCAAAGAATCTCATCTCACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959835       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY910263       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912326       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY430878       <-- ............................CATCAAAGAATCTCATCTCACT  Raphanus sativus cv GSK3-1
EW733153       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX753986       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY929638       <-- ..................................................  Raphanus sativus var. oleiformis
EV536298       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905655       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972789       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY916682       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914165       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD963560       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD573884       --> AACTGCTCTTTCTCCCAACCACAATACCCATCAAAGAATCTCATCTCACT  Raphanus sativus cv Early Scarlet Globe
EY926018       --> AACTGCTCTTTCTCCCAACCACAATACCCATCAAAGAATCTCATCTCACT  Raphanus sativus var. oleiformis
EY928921       --> AACTGCTCTTTCTCCCAACCACAATACCCATCAAAGAATCTCATCTCACT  Raphanus sativus var. oleiformis
EY902037       --> AACTGCTCTTTCTCCCAACCACAGTACCCATCAAAGAATCTCATCTCACT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968606       --> AACTGCTCTTTCTCCCAACCACAGTACCCATCAAAGAATCTCATCTCACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540779       --> AACTGCTCTTTCTCCCAACCACAGTACCCATCAAAGAATCTCATCTCACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542101       --> AACTGCTCTTTCTCCCAACCACAGTACCCATCAAAGAATCTCATCTCACT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530587       --> AACTGCTCTTTCTCCCAACCACAATACCCATCAAAGAATCTCATCTCACT  Raphanus raphanistrum subsp. maritimus
FD985371       --> AACTGCTCTTTCTCCCAACCACAATACCCATCAAAGAATCTCATCTCACT  Raphanus raphanistrum subsp. landra
EX758409       --> AACTGCTCTTTCTCCCAACCACAGTACCCATCAAAGAATCTCATCTCACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW721910       --> AACTGCTCTTTCTCCCAACCACAATACCCATCAAAGAATCTCATCTCACT  Raphanus sativus var. oleiformis
EW737798       --> AACTGCTCTTTCTCCCAACCACAATACCCATCAAAGAATCTCATCTCACT  Raphanus sativus cv Rat-Tail Radish #3870

               1001   -   1051
UN16934        --> TCTCCCCACCAGCTTCCTCTTCACCATCTCTGCAGCCAACCCTACACTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959835       <-- ..................................................
EY910263       <-- ..................................................
EY912326       <-- ..................................................
FY430878       <-- TCTCCCCACCAGCTTCCTCTTCACCATCTCTGCAGCCAACCCTACACTCT
EW733153       <-- ..................................................
EX753986       <-- ..................................................
EY929638       <-- ..................................................
EV536298       <-- ..................................................
EY905655       <-- ..................................................
FD972789       <-- ..................................................
EY916682       --> ..................................................
EY914165       --> ..................................................
FD963560       --> ..................................................
FD573884       --> TCTCCCCACCAGCTTCCTCTTCACCATCTCTGCAGCCAACCCTACACTCT
EY926018       --> TCTCCCCACCAGCTTCCTCTTCACCATCTCTGCAGCCAACCCTACACTCT
EY928921       --> TCTCCCCACCAGCTTCCTCTTCACCATCTCTGCAGCCAACCCTACACTCT
EY902037       --> TCTCCCCACCAGCTTCCTCTTCACCATCTCTGCAGCCAACCCTACACTCT
FD968606       --> TCTCCCCACCAGCTTCCTCTTCACCATCTCTGCAGCCAACCCTACACCCT
EV540779       --> TCTCCCCACCAGCTTCCTCTTCACCATCTCTGCAGCCAACCCTACACTCT
EV542101       --> TCTCCCAACCAACTTCCTCTTCACCATCTCTGCAGCCAACCCCACACTCT
FD530587       --> TCTCCCCACCAGCTTCCTCTTCACCATCTCTGCAGCCAACCCTACACTCT
FD985371       --> TCTCCCCACCAGCTTCCTCTTCACCATCTCTGCAGCCAACCCTACACTCT
EX758409       --> TCTCCCCACCAGCTTCCTCTTCACCATCTCTGCAGCCAACCCTACACTCT
EW721910       --> TCTCCCCACCAGCTTCCTCTTCACCATCTCTGCAGCCAACCCTACACTCT
EW737798       --> TCTCCCCACCAGCTTCCTCTTCACCATCTCTGCAGCCAACCCTACACTCT

               1051   -   1101
UN16934        --> CTCTCGTCCCGTAGTACAATCCTTTCATTACTTGTTTGAACGCTGCTCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959835       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY910263       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912326       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY430878       <-- CTCTCGTCCCGTAGTACAATCCTTTCATTACTTGTTTGAACGCTGCTCCG  Raphanus sativus cv GSK3-1
EW733153       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX753986       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY929638       <-- ..................................................  Raphanus sativus var. oleiformis
EV536298       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905655       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972789       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY916682       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914165       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD963560       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD573884       --> CTCTCGTCCCGTAGTACAATCCTTTCATTACTTGTTTGAACGCTGCTCCG  Raphanus sativus cv Early Scarlet Globe
EY926018       --> CTCTCGTCCCGTAGTACAATCCTTTCATTACTTGTTTGAACGCTGCTCCG  Raphanus sativus var. oleiformis
EY928921       --> CTCTCGTCCCGTAATACAATCCTTTCATTACTTGTTTGAACGCTGCTCCG  Raphanus sativus var. oleiformis
EY902037       --> CTCTCGTCCCGTAGTACAACCCTTTCATCACCTCTTTGAACGCGGCTCCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968606       --> CTCTCGTCCCGTAGTACAACCCTTTCATCACCTCTTTGAACGCGGCTCCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540779       --> CTCTCGTCCCGTAGTACAACCCTTTCATCACCTCTTTGAACGCGGCTCCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542101       --> CTCTCGTCCCATAGTACAATCCTTTCATCACCTCTTTGAACGCTGCTCCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530587       --> CTCTCGTCCCGTAGTACAATCCTTTCATTACTTGTTTGAACGCTGCTCCG  Raphanus raphanistrum subsp. maritimus
FD985371       --> CTCTCGTCCCGTAGTACAATCCTTTCATTACTTGTTTGAACGCTGCTCCG  Raphanus raphanistrum subsp. landra
EX758409       --> CTCTCGTCCCGTAGTACAACCCTTTCATCACCTCTTTGAACGCGGCTCCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW721910       --> CTCTCGTCCCGTAGTACAATCCTTTCATTACTTGTTTGAACGCTGCTCCG  Raphanus sativus var. oleiformis
EW737798       --> CTCTCGTCCCGTAGTACAATCCTTTCATTACTTGTTTGAACGCTGCTCCG  Raphanus sativus cv Rat-Tail Radish #3870

               1101   -   1151
UN16934        --> CTCTTCTCAACCTCGTTGCCGCTCCTTGGACTCACC-AGGAACAACCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959835       <-- ..................................................
EY910263       <-- ..................................................
EY912326       <-- ..................................................
FY430878       <-- CTCTTCTCAACCTCGTTGCCGCTCCTTGGACTCACC-AGGAACAACCCTT
EW733153       <-- ......................tctTTGGACTCACCCAGGAACAACCTTT
EX753986       <-- .................ttgccgttcTGGACTCACC-AGGAACAACC-TT
EY929638       <-- ......................gctcTGGACTCACC-AGGAACAAC--CT
EV536298       <-- ..................................................
EY905655       <-- ..................................................
FD972789       <-- ..................................................
EY916682       --> ..................................................
EY914165       --> ..................................................
FD963560       --> ..................................................
FD573884       --> CTCTTCTCAACCTCGTCGCCGCTCCTTGGACTCACC-AGGAACAACCCTT
EY926018       --> CTCTTCTCAACCTCGTTGCCGCTCCTTGGACTCACC-AGGAACAACCCTT
EY928921       --> CTCTTCTCAACCTCGTCGCCGCTCCTTGGACTCACC-AGGAACAACCCTT
EY902037       --> CTCTTCTCAACCTCGTTGCCGTTCCTTGGACTCACC-AGGAACAACCCTT
FD968606       --> CTCTTCTCAACCTCGTTGCCGTTCCTTGGACTCACC-ACGAACAACCCTT
EV540779       --> CTCTTCTCAACCTCGTTGCCGTTCCTTGGACTCACC-AGGAACAACCCTT
EV542101       --> CTCTTCTCAACCTCGTTGCCGTTCCTTGGACTCACC-AGGAACAACCCTT
FD530587       --> CTCTTCTCAACCTCGTTGCCGCTCCTTGGACTCACC-AGGAACAACCCTT
FD985371       --> CTCTTCTCAACCTCGTTGCCGCTCCTTGGACTCACC-AGGAACAACCCTT
EX758409       --> CTCTTCTCAACCTCGTTGCCGTTCCTTGGACTCACC-AGGAACAACCCTT
EW721910       --> CTCTTCTCAACCTCGTCGCCGCTCCTTGGACTCACC-AGGAACGACCCTT
EW737798       --> CTCTTCTCAACCTCGTTGCCGCTCCTTGGACTCACC-AGGAACAACCCTT

               1151   -   1201
UN16934        --> CTTCCAAAGGTCCACCAAAGAAGAGACTCTTGTCTGAAAACGTTCCCGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959835       <-- ..................................................
EY910263       <-- ..................................................
EY912326       <-- ..................................................
FY430878       <-- CTTCCAAAGGTCCACCAAAGAAGAGACTCTTGTCTGAAAACGTTCCCGCC
EW733153       <-- CTTCCAAAGGTCCACCAAAGAAGAGACTCTTGTCTGAAAACGTTCCCGCC
EX753986       <-- CTTCCAGAGGTCCACCAAAGAAGAGACTCTTGTCTGAAAACGTTCCCGCC
EY929638       <-- CTTCCAAAGGTCCACCAAAGAAGAGACTCT-GTCTGAAAACGTTCCCGCC
EV536298       <-- .TTCCAGAGGTCCACCAAAGAAGAGACTCTTGTCTGAAAACGTTCCCGCC
EY905655       <-- .TTCCAGAGGTCCACCAAAGAAGAGACTCTTGTCTGAAAACGTTCCCGCC
FD972789       <-- ..................................................
EY916682       --> ..................................................
EY914165       --> ..................................................
FD963560       --> ..................................................
FD573884       --> CTTCCAAAGGTCCACCGAAGAAGAGGCTCTTGTCTGAAAACGTTCCCGCC
EY926018       --> CTTCCAAAGGTCCACCAAAGAAGAGACTCTTGTCTGAAAACGTTCCCGCC
EY928921       --> CTTCCAAAGGTCCACCGAAAAAAAGGCTCTTGTCTGAAAACGTCCCCGCC
EY902037       --> CTTCCAGAGGTCCACCAAAGAAGAAACTCTTGTCTGAAAACGTTCCCGCC
FD968606       --> CTTCCAGAGGTCCACCAAAGAAAAAACTCTTGTCTGAAAACGTTCCCGCC
EV540779       --> CTTCCAGAGGTCCACCAAAGAAGAGACTCTTGTCTGAAAACGTTCCCGCC
EV542101       --> CTTCCAAAGGTCCACCAAAGAAGAGGCTCTTGTCTGAAAACGTTCCCGCC
FD530587       --> CTTCCAAAGGTCCACCAAAGAAGAGGCTTGTGTCTGAAAATGTTCCCGCC
FD985371       --> CTTCCAAAGGTCCACCAAAGAAGAGACTCTTGTCTGAAAACGTTCCCGCC
EX758409       --> CTTCCAGAGGTCCACCAAAGAAGAGACTCTTGTCTGAAAACGTTCCCGCC
EW721910       --> CTTCCGAAGGTCCACCGAAGAAGAGGCTCTTGTCTGAAAACGTTCCCGCC
EW737798       --> CTTCCAAAGGTCCACCAAAGAAGAGACTCTTGTCTGAAAACGTTCCCGCC

               1201   -   1251
UN16934        --> ATGTCTAGGACCGTTGATTTGGTGGTCTCTTTGATTGACATGAGCGAGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959835       <-- ..................................................
EY910263       <-- ..................................................
EY912326       <-- ..................................................
FY430878       <-- ATGTCTAGGACCGTTGATTTGGTGGTCTCTTTGATTGACATGAGCGAGGG
EW733153       <-- ATGTCTAGGACCGTTGATTTGGTGGTCTCTTTGATTGACATGAGCGAGGG
EX753986       <-- ATGTCTAGGACCGTTGATTTGGTGGTCTCTTTGATTGACATGAGCGAGGG
EY929638       <-- ATGTCTAGGACCGTTGATTTGGTGGTCTCTTTGATTGACATGAGCGAGGG
EV536298       <-- ATGTCTAGGACCGTTGATTTGGTGGTCTCTTTGATTGACATGAGCGAGGG
EY905655       <-- ATGTCTAGGACCGTTGATTTGGTGGTCTCTTTGATTGACATGAGCGAGGG
FD972789       <-- ..................................................
EY916682       --> ..................................................
EY914165       --> ..................................................
FD963560       --> ..................................................
FD573884       --> ATGTCTAGGACCGTTGATTTTGTGGTCTCCTTGATTGACATGAGCGAGGG
EY926018       --> ATGTCTAGGACCGTTGATTTGGTGGTCTCTTTGATTGACATGAGCGAGGG
EY928921       --> ATGTCTAGGACCGTTGATTTTGTGGTCTCCTTGATTGACATGAGCGAGGG
EY902037       --> ATGTCTAGGACCGTTGATTTGGTGGTCTCTTTGATTGACATGAGCGAGG.
FD968606       --> ATGTCTAGGACCGTTGATTTGGTGGTCTCTTTGATTGACATGAGCGAGGG
EV540779       --> ATGTCTAGGACCGTTGATTTGGTGGTCTCTTTGATTGACATGAGCGAGGG
EV542101       --> ATGTCTAGGACCGTTGATTTTGTGGTCTCCTTGATTGACATGAGCGAGGG
FD530587       --> ATGTCTAGGACCGTTGATTTGGTGGTCTCTTTGATTGACATGAGCGAGGG
FD985371       --> ATGTCTAGGACCGTTGATTTGGTGGTCTCTTTGATTGACATGAGCGAGGG
EX758409       --> ATGTCTAGGACCGTTGATTTGGTGGTCTCTTTGATTGACATGAGCGAGGG
EW721910       --> ATGTCTAGGACCGTTGATTTTGTGGTCTCCTTGATTGACATGAGCGAGGG
EW737798       --> ATGTCTAGGACCGTTGATTTGGTGGTCTCTTTGATTGACATGAGCGAGGG

               1251   -   1301
UN16934        --> ACGGTTGAGGATGACTCCTATAGGACCTGAGGGTCCAACTGAGAGGAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959835       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY910263       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912326       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY430878       <-- ACGGTTGAGGATGACTCCTATAGGACCTGAGGGTCCAACTGAGAGGAGTA  Raphanus sativus cv GSK3-1
EW733153       <-- ACGGTTGAGGATGACTCCTATAGGACCTGAGGGTCCAACTGAGAGGAGTA  Raphanus sativus cv Rat-Tail Radish #3870
EX753986       <-- ACGGTTGAGGATGACTCCTATAGGACCTGAGGGTCCAACAGAGAGGAGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY929638       <-- ACGGTTGAGGATGACTCCTATAGGAC-TGAGGGTCCAACTGAGAGGAGTA  Raphanus sativus var. oleiformis
EV536298       <-- ACGGTTGAGGATGACTCCTATAGGACCTGAGGGTCCAACAGAGAGGAGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905655       <-- ACGGTTGAGGATGACTCCTATAGGACCTGAGGGTCCAACAGAGAGGAGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972789       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY916682       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914165       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD963560       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD573884       --> ACGGTTGAGGATGACTCCTATAGGACCTGAGGGTCCAACTGAGAGGAGTA  Raphanus sativus cv Early Scarlet Globe
EY926018       --> ACGGTTGAGGATGACTCCTATAGGACCTGAGGGTCCAACTGAGAGGAGTA  Raphanus sativus var. oleiformis
EY928921       --> ACGGTTGAGGATGACTCCTATAGGACCTGAGGGTCCAACTGAAAGGAGTA  Raphanus sativus var. oleiformis
EY902037       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968606       --> ACGGTTGAGGATGACTCCTATAGGACCTGAGGG.................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540779       --> ACGGTTGAGGATGACTCCTATAGGACCTGAGGGTCCAACAGAGAGGAGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542101       --> ACGGTTGAGGATGACTCCTATAGGACCTGAGGGTCCAACAGAGAGGAGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530587       --> ACGGTTGAGGATGACTCCTATAGGACCTGAGGGTCCAACAGAGAGGAGGA  Raphanus raphanistrum subsp. maritimus
FD985371       --> ACGGTTGAGGATGACTCCTATAGGACCTGAGGGTCCAACTGAGAGGAGTA  Raphanus raphanistrum subsp. landra
EX758409       --> ACGGTTGAGGATGACTCCTATAGGACCTGAGGGTCCAACAGAGAGGAGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW721910       --> ACGGTTGAGGATGACTCCTATAGGACCTGAGGGTCCAACTGAGAGGAGTA  Raphanus sativus var. oleiformis
EW737798       --> ACGGTTGAGGATGACTCCTATAGGACCTGAGGGTCCAACTGAGAGGAGTA  Raphanus sativus cv Rat-Tail Radish #3870

               1301   -   1351
UN16934        --> GGATCACCGTCTTTTCGAAGATGTGGACTCCTTCTAGCTTCTCTGTTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959835       <-- ..................................................
EY910263       <-- ..................................................
EY912326       <-- ..................................................
FY430878       <-- GGATCACCGTCTTTTCGAAGATGTGGACTCCTTCTAGCTTCTCTGTTGCT
EW733153       <-- GGATCACCGTCTTTTCGAAGATGTGGACTCCTTCTAGCTTCTCTGTTGCT
EX753986       <-- GGATCACCGTCTTTTCGAAGATGTGGACTCCGTCTAGCTTCTCTGTTGCT
EY929638       <-- GGATCACCGTCTTTTCGAAGATGTGGACTCCTTCTAGCTTCTCTGTTGCT
EV536298       <-- GGATCACCGTCTTTTCGAAGATGTGGACTCCGTCTAGCTTCTCTGTTGCT
EY905655       <-- GGATCACCGTCTTTTCGAAGATGTGGACTCCGTCTAGCTTCTCTGTTGCT
FD972789       <-- ..................................................
EY916682       --> ..................................................
EY914165       --> ..................................................
FD963560       --> ..................................................
FD573884       --> GGATCACCGTCTTTTCGAAGATGTGGACTCTGTCTAGCTTCTCTGTTGCT
EY926018       --> GGATCACCGTCTTTTCGAAGATGTGGACTCCTTCTAGCTTCTCTGTTGCT
EY928921       --> GGATCACCGTCTTTT...................................
EY902037       --> ..................................................
FD968606       --> ..................................................
EV540779       --> GGATCACCGTCTTTTCGAAGATGTGGACTCCGTCTAGCTTCTCTGTTGCT
EV542101       --> GGATCACCGTCTTTTCGAAGATGTGGACTCCTTCTAGCTTCTCTGTTGCT
FD530587       --> GGATCACCGTCTTTTCGAAGATGTGGACTCCATCTAGCTTCTCTGTTGCT
FD985371       --> GGATCACCGTCTTTTCGAAGATGTGGACTTCTTCTAGCTTCTCTGTTGCT
EX758409       --> GGATCACCGTCTTTTCGAAGATGTGGACTCCGTCTAGCTTCTCTGTTGCT
EW721910       --> GGATCACCGTCTTTTCGAAGATGTGGACTCCGTCTAGCTTCTCTGTTGCT
EW737798       --> GGATCACCGTCTTTTCGAAGATGTGGACTCCTTCTAGCTTCTCTGTTGCT

               1351   -   1401
UN16934        --> ATCAGGAGACATCCTGTCTCTGGCTCTAGTATCTTGTGTGCCCATTTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959835       <-- ..................................................
EY910263       <-- ..................................................
EY912326       <-- ..................................................
FY430878       <-- ATCAGGAGACATCCTGTCTCTGGCTCTAGTATCTTGTGTGCCCATTTGTT
EW733153       <-- ATCAGGAGACATCCTGTCTCTGGCTCTAGTATCTTGTGTGCCCATTTGTT
EX753986       <-- AGCAGGAGACACCCTGTCTCTGGCTCTAGTATCTTGTGTGCCCATTTGTT
EY929638       <-- ATCAGGAGACATCCTGTCTCTGGCTCTAGTATCTTGTGTGCCCATTTGTT
EV536298       <-- AGCAGGAGACACCCTGTCTCTGGCTCTAGTATCTTGTGTGCCCATTTGTT
EY905655       <-- AGCAGGAGACACCCTGTCTCTGGCTCTAGTATCTTGTGTGCCCATTTGTT
FD972789       <-- ...................................GTGTGCCCATTTGTT
EY916682       --> ..................................................
EY914165       --> ..................................................
FD963560       --> ..................................................
FD573884       --> ATTAGGAGACATCCTGTCTCTGGCTCTAGTATCTTGTGTGCCCATTTATT
EY926018       --> ATCAGGAGACATCCTGTCTCTGGCTCTAGTATCTTGTGTGCCCATTTGTT
EY928921       --> ..................................................
EY902037       --> ..................................................
FD968606       --> ..................................................
EV540779       --> AGCAGGAGACACCCTGTCTCTGGCTCTAGTATCTTGTGTGCCCATTTGTT
EV542101       --> ATCAGGAGACATCCTGTCTCTGGCTCTAGTATCTTGTGTGCCCATTTGTT
FD530587       --> ATCAGGAGACATCCTGTCTCTGGCTCTAGTATCTTGTGTGCCCATTTGTT
FD985371       --> AGTAGGAGACATCCTGTCTCTGGCTCTAGTATCTTGTGTGCCCATTTGTT
EX758409       --> AGCAGGAGACACCCTGTCTCTGGCTCTAGTATCTTGTGTGCCCATTTGTT
EW721910       --> ATTAGGAGACATCCTGTCTCTGGCTCTAGTATCTTGTGTGCCCATTTATT
EW737798       --> ATCAGGAGACATCCTGTCTCTGGCTCTAGTATCTTGTGTGCCCATTTGTT

               1401   -   1451
UN16934        --> CCCAGTTGTGATCAGTGATGATGATAGTGACGAGTCCTTCTCAGGGGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959835       <-- ..................................................
EY910263       <-- ..................................................
EY912326       <-- ..................................................
FY430878       <-- CCCAGTTGTGATCAGTGATGATGATAGTGACGAGTCCTTCTCAGGGGTTG
EW733153       <-- CCCAGTTGTGATCAGTGATGATGATAGTGACGAGTCCTTCTCAGGGGTTG
EX753986       <-- CCCAGTTGTGATCAGTGATGATGATAGTGACGAGTTCTTCTCAGGGGTTG
EY929638       <-- CCCAGTTGTGATCAGTGATGATGATAGTGACGAGTCCTTCTCAGGGGTTG
EV536298       <-- CCCAGTTGTGATCAGTGATGTTGATAGTGACGAGTTCTTCTCAGGGGTTG
EY905655       <-- CCCAGTTGTGATCAGTGATGATGATAGTGACGAGTTCTTCTCAGGGGTTG
FD972789       <-- CCCAGTTGTGATCAGTGATGATGATAGTGACGAGTTCTTCTCAGGGGTTG
EY916682       --> ..................................................
EY914165       --> ..................................................
FD963560       --> ..................................................
FD573884       --> CCCAGTTGTGATCAGTGATGATGATAGTGACGAGTCCTTC..........
EY926018       --> CCCAGTTGTGATCAGTGATGATGATAGTGACGAGTCCTTCTCAGGGGTTG
EY928921       --> ..................................................
EY902037       --> ..................................................
FD968606       --> ..................................................
EV540779       --> CCCAGTTGTGATCAGTGATGTTGATAGTGACGAGTTCTTCTCAGGGGTTG
EV542101       --> CCCAGTTGTGATCAGCGATGATGATAGTGACGAGTCCTTCTCAGGGGTTG
FD530587       --> CCCAGTTGTGATCAGTGATGATGATAGTGACGAGTCCTTC..........
FD985371       --> CCCAGTTGTGATCAGTGATGATGATAGTGAa...................
EX758409       --> CCCAGTTGTGATCAGTGATGATGATAGTGACGAGTTCTTCTCAGGGGTTG
EW721910       --> CCCAGTTGTGATCAGTGATGATGATAGTGACGAGTCCTTCTCAAGGGTTG
EW737798       --> CCCAGTTGTGATCAGTGATGATGATAGTGACGAGTCCTTCTCAGGGGTTG

               1451   -   1501
UN16934        --> CAGCTTGCTCTCCAGCTACAAGCCTTGCCCTGAACTCTCTCCAGTCAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959835       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY910263       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912326       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY430878       <-- CAGCTTGCTCTCCAGCTACGAGCCTTGCCCTGAACTCTCTCCAGTCAGCA  Raphanus sativus cv GSK3-1
EW733153       <-- CAGCTTGCTCTCCAGCTACGAGCCTTGCCCTGAACTCTCTCCAGTCAGCA  Raphanus sativus cv Rat-Tail Radish #3870
EX753986       <-- CAGCTTGCTCTCCAGCTACAAGCCTTGCCCTGAACTCTCTCCAGTCAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY929638       <-- CAGCTTGCTCTCCAGCTACGAGCCTTGCCCTGAACTCTCTCCAGTCAGCA  Raphanus sativus var. oleiformis
EV536298       <-- CAGCTTGCTCTCCAGCTACAAGCCTTGCCCTGAACTCTCTCCAGTCAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905655       <-- CAGCTTGCTCTCCAGCTACAAGCCTTGCCCTGAACTCTCTCCAGTCAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972789       <-- CAGCTTGCTCTCCAGCTACAAGCCTTGCCCTGAACTCTCTCCAGTCAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY916682       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914165       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD963560       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD573884       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY926018       --> CAGCTTGCTCTCCAGCTACGAGCCTTGCCCTGAACTCTCTCCAGTCAGCA  Raphanus sativus var. oleiformis
EY928921       --> ..................................................  Raphanus sativus var. oleiformis
EY902037       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968606       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540779       --> CAGCTTGGTCTCCAGCTACAAGCCTTGCCCTGAACTCTCTCCAGTCAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542101       --> CAGCTTGCTCACCAGCTACAAGCCTTGCCCTGAACTCTCTCCAGTCAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530587       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD985371       --> ..................................................  Raphanus raphanistrum subsp. landra
EX758409       --> CAGCTTGCTCTCCAGCTACAAGCCTTGCCCTGAACTCTCTCCAGTCAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW721910       --> CAGCTTGCTCACCAGCTACga.............................  Raphanus sativus var. oleiformis
EW737798       --> CAGCTTGCTCTCCAGCTACGAGCCTTGCCCTGAACTCTCTCCAGTCAGCA  Raphanus sativus cv Rat-Tail Radish #3870

               1501   -   1551
UN16934        --> GCATCTGATGTAGAACTGTTGTTAACACTATCCTTGAAGAGATCAGCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959835       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY910263       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912326       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY430878       <-- GCATCTGATGTAGAACTGTTGTTAACACTATCCTTGAAGAGATCAGCATC  Raphanus sativus cv GSK3-1
EW733153       <-- GCATCTGATGTAGAACTGTTGTTAACACTATCCTTGAAGAGATCAGCATC  Raphanus sativus cv Rat-Tail Radish #3870
EX753986       <-- GCATCTGATGTAGAACTG---TTAACACTATCCTTGAAGAGATCAGCATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY929638       <-- GCATCTGATGTAGAACTGTTGTTAACACTATCCTTGAAGAGATCAGCATC  Raphanus sativus var. oleiformis
EV536298       <-- GCATCTGATGTAGAACTG---TTAACACTATCCTTGAAGAGATCAGCATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905655       <-- GCATCTGATGTAGAACTG---TTAACACTATCCTTGAAGAGATCAGCATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972789       <-- GCATCTGATGTAGAACTG---TTAACACTATCCTTGAAGAGATCAGCATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY916682       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914165       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD963560       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD573884       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY926018       --> GCATCTGATGTAGAACTGTTGTTAACACTATCCTTGAAGAGATCAGCATC  Raphanus sativus var. oleiformis
EY928921       --> ..................................................  Raphanus sativus var. oleiformis
EY902037       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968606       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540779       --> GCATCTGATGTAGAACTGTT---AACACTATCCTTGAAGAGATCAGCATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542101       --> GCATCTGATGTAGAACTGTT---AACACTATCCTTGAAGAGATCAGCATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530587       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD985371       --> ..................................................  Raphanus raphanistrum subsp. landra
EX758409       --> GCATCTGATGTAGAACTGTT---AACACTATCCTTGAAGAGATCAGCATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW721910       --> ..................................................  Raphanus sativus var. oleiformis
EW737798       --> GCATCTGATGTAGAACTGTTGTTAACACTATCCTTGAAGAGATCAGCATC  Raphanus sativus cv Rat-Tail Radish #3870

               1551   -   1601
UN16934        --> ATCCTCCAGTGGCTTCCATGAATCCGAAAGAGAACAATTCACAGAGGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959835       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY910263       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912326       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY430878       <-- ATCCTCCAATGGCTTCCATGAATCCGAAAGAGAACAATTCACAGAGATTG  Raphanus sativus cv GSK3-1
EW733153       <-- ATCCTCCAATGGCTTCCATGAATCCGAAAGAGAACAATTCACAGAGATTG  Raphanus sativus cv Rat-Tail Radish #3870
EX753986       <-- ATCCTCCAGTGGCTTCCATGAATCCGAAAGAGAACAATTCACAGAGGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY929638       <-- ATCCTCCAATGGCTTCCATGAATCCGAAAGAGAACAATTCACAGAGATTG  Raphanus sativus var. oleiformis
EV536298       <-- ATCCTCCAGTGGCTTCCATGAATCCGAAAGAGAACAATTCACAGAGGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905655       <-- ATCCTCCAGTGGCTTCCATGAATCCGAAAGAGAACAATTCACAGAGGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972789       <-- ATCCTCCAGTGGCTTCCATGAATCCGAAAGAGAACAATTCACAGAGGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY916682       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914165       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD963560       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD573884       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY926018       --> ATCCTCCAATGGCTTCCATGAATCCGAAAGA-AAC-ATTCACAGAGa...  Raphanus sativus var. oleiformis
EY928921       --> ..................................................  Raphanus sativus var. oleiformis
EY902037       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968606       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540779       --> ATCCTCCAGTGGCTTCCATGAATCCGAAAGAGAACAATTCACAGAGGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542101       --> ATCCTCCAGTGGCTTCCATGAATCCGAAAGAGAACAATTCACAG......  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530587       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD985371       --> ..................................................  Raphanus raphanistrum subsp. landra
EX758409       --> ATCCTCCAGT........................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW721910       --> ..................................................  Raphanus sativus var. oleiformis
EW737798       --> ATCCTCCAATGGCTTCCATGAATCCGAAAGAGAACAATTCACAGAGATTG  Raphanus sativus cv Rat-Tail Radish #3870

               1601   -   1651
UN16934        --> GAGAAGCAACCTTCCTGGTGAGAAACTGGCAGGAGTTTCTCCTTGGGTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959835       <-- ..................................................
EY910263       <-- ..................................................
EY912326       <-- ..................................................
FY430878       <-- GAGAAGCAACCTTCCTGGTGAGAAACTGGCAGGAGTTTTTCCTTGGGTAA
EW733153       <-- GAGAAGCAACCTTCCTGGTGAGAAACTGGCAGGAGTTTCTCCTTGGGTAA
EX753986       <-- GAGAAGCAACCTTCCTGGTGAGAAACTGGCAGGAGTTTCTCCTTGGGTAA
EY929638       <-- GAGAAGCAACCTTCCTGGTGAGAAACTGGCAGGAGTTTCTCCTTGGGTAA
EV536298       <-- GAGAAGCAACCTTCCTGGTGAGAAACTGGCAGGAGTTTCTCCTTGGGTAA
EY905655       <-- GAGAAGCAACCTTCCTGGTGAGAAACTGGCAGGAGTTTCTCCTTGGGTAA
FD972789       <-- GAGAAGCAACCTTCCTGGTGAGAAACTGGCAGGAGTTTCTCCTTGGGTAA
EY916682       --> ..................................................
EY914165       --> ..................................................
FD963560       --> ..................................................
FD573884       --> ..................................................
EY926018       --> ..................................................
EY928921       --> ..................................................
EY902037       --> ..................................................
FD968606       --> ..................................................
EV540779       --> GAGAAGCAACCTTCCTGGTGAGAAACTGGCAAGAGTTTCTCCTTGGGTAA
EV542101       --> ..................................................
FD530587       --> ..................................................
FD985371       --> ..................................................
EX758409       --> ..................................................
EW721910       --> ..................................................
EW737798       --> GAGAAGCAACCTTCCTGGTGAGAAA.........................

               1651   -   1701
UN16934        --> CAAGAAAAGATTCTGGTTTTGATGAATGGGGGGACAAACTCTTTGACACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959835       <-- ..................................................
EY910263       <-- ..................................................
EY912326       <-- ..................................................
FY430878       <-- CAAGAAAAGATTCTGGTTTTGATGAATGGGGGGACAAGCTCTTTGACACC
EW733153       <-- CAAGAACAGATTCTGGTTTTGATGAATGGGGGGACAAGCTCTTTGACACC
EX753986       <-- CAAGAAAAGATTCTGGTTTTGATGAATGGGGGGACAAACTCTTTGACACC
EY929638       <-- CAAGAAAAGATTCTGGTTTTGATGAATGGGGGGACAAGCTCTTTGACACC
EV536298       <-- CAAGAAAAGATTCTGGTTTTGATGAATGGGGGGACAAACTCTTTGACACC
EY905655       <-- CAAGAAAAGATTATGGTTTTGATGAATGGGGGGACAAACTCTTTGACACC
FD972789       <-- CAAGAAAAGATTCTGGTTTTGATGAATGGGGGGACAAACTCTTTGACACC
EY916682       --> ..................................................
EY914165       --> ..................................................
FD963560       --> ..................................................
FD573884       --> ..................................................
EY926018       --> ..................................................
EY928921       --> ..................................................
EY902037       --> ..................................................
FD968606       --> ..................................................
EV540779       --> CAAGA.............................................
EV542101       --> ..................................................
FD530587       --> ..................................................
FD985371       --> ..................................................
EX758409       --> ..................................................
EW721910       --> ..................................................
EW737798       --> ..................................................

               1701   -   1751
UN16934        --> AGAGACTGATCTTGAGGTAAGAAAAGAAACATCCATGT-CTCTCTTTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959835       <-- ..................................................
EY910263       <-- ..................................................
EY912326       <-- ..................................................
FY430878       <-- AGAGACTGATCTTGAGGTAAGAAAAGAAACATCCATATCCTCTCTTTGTT
EW733153       <-- AGAGACTGATCTTGAGGTAAGAAAAGAAACATCCATATCCTCTCTTTGTT
EX753986       <-- AGAGACTGATCTTGAGGTAAGAAAAGAAACATCCATGT-CTCTCTTTGTT
EY929638       <-- AGAGACTGATCTTGAGGTAAGAAAAGAAACATCCATATCCTCTCTTTGTT
EV536298       <-- AGAGACTGATCTTGAGGTAAGAAAAGAAACATCCATGT-CTCTCTTTGTT
EY905655       <-- AGAGACTGATCTTGAGGTAAGAAAAGAAACATCCATGT-CTCTCTTTGTT
FD972789       <-- AGAGACTGATCTTGAGGTAAGAAAAGAAACATCCATGT-CTCTCTTTGTT
EY916682       --> ..................................................
EY914165       --> ..................................................
FD963560       --> ..................................................
FD573884       --> ..................................................
EY926018       --> ..................................................
EY928921       --> ..................................................
EY902037       --> ..................................................
FD968606       --> ..................................................
EV540779       --> ..................................................
EV542101       --> ..................................................
FD530587       --> ..................................................
FD985371       --> ..................................................
EX758409       --> ..................................................
EW721910       --> ..................................................
EW737798       --> ..................................................

               1751   -   1801
UN16934        --> GTACCTTCTTTTGTTTCTCTGACTCAGTTCACTTTAGTTCCTCTGAAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959835       <-- ..................................................
EY910263       <-- ..................................................
EY912326       <-- ..................................................
FY430878       <-- GTACCTTCTTTTGTTTCTCTGACTCAGTTCAGTTTAGTTCCTCTGAAGAG
EW733153       <-- GTACCTTCTTTTGTTTCTCTGACTCAGTTCAGTTTAGTTCCTCTGAAGAG
EX753986       <-- GTACCTTCTTTTGTTTCTCTGACTCAGTTCACTTTAGTTCCTCTcc....
EY929638       <-- GTACCTTCTTTTGTTTCTCTGACTCAGTTCAGTTTAGTTCCTCTcc....
EV536298       <-- GTACCTTCTTTTGTTTCTCTGACTCAGTTCACTTTAGTTCCTCTGAAGAG
EY905655       <-- GTACCTTCTTTTGTTTCTCTGACTCAGTTCACTTTAGTTCCTCTcc....
FD972789       <-- GTACCTTCTTTTGTTTCTCTGACTCAGTTCACTTTAGTTCCTCTGAAGAG
EY916682       --> ..................................................
EY914165       --> ..................................................
FD963560       --> ..................................................
FD573884       --> ..................................................
EY926018       --> ..................................................
EY928921       --> ..................................................
EY902037       --> ..................................................
FD968606       --> ..................................................
EV540779       --> ..................................................
EV542101       --> ..................................................
FD530587       --> ..................................................
FD985371       --> ..................................................
EX758409       --> ..................................................
EW721910       --> ..................................................
EW737798       --> ..................................................

               1801   -   1851
UN16934        --> AAGACAGAGCATAAAAGTAACATCTACATATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959835       <-- .................................
EY910263       <-- .................................
EY912326       <-- .................................
FY430878       <-- AAGACAGAGCATAAAAGTAACA...........
EW733153       <-- AAGcc............................
EX753986       <-- .................................
EY929638       <-- .................................
EV536298       <-- AAGACAGAGCATAAAAGTAACATCTACATATCC
EY905655       <-- .................................
FD972789       <-- ccc..............................
EY916682       --> .................................
EY914165       --> .................................
FD963560       --> .................................
FD573884       --> .................................
EY926018       --> .................................
EY928921       --> .................................
EY902037       --> .................................
FD968606       --> .................................
EV540779       --> .................................
EV542101       --> .................................
FD530587       --> .................................
FD985371       --> .................................
EX758409       --> .................................
EW721910       --> .................................
EW737798       --> .................................