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Alignment for radish unigene UN16951

               1      -     51
UN16951        --> GGAAAAACGTTTGAACTCAAAAAAGCAAGGAACGGTTCATAAACTCATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- ..................................................
FD555839       <-- ..................................................
FD985810       <-- ..................................................
FD555904       <-- ..................................................
EY894349       <-- ..................................................
EY894013       <-- ..................................................
EV548017       <-- ..................................................
FD550506       <-- ..................................................
FD986396       --> GGAAAAACGTTTGAACTCAAAAAAGCAAGGAACGGTTCATAAACTCATAA
FD987476       --> GGAAAAACGTTTGAACTCAAAAAAGCAAGGAACGGTTCATAAACTCATAA
FD560329       --> ....................................ggATAAACTCATAA
FD990122       --> ..................................................
FY434825       --> ..................................................
FY435767       --> ..................................................
FY450748       --> ..................................................
FY430403       --> ..................................................
FY433870       --> ..................................................
FY445671       --> ..................................................
FY447671       --> ..................................................
FY447644       --> ..................................................
FY432183       --> ..................................................
FY439316       --> ..................................................
EY898231       --> ..................................................
FY453911       --> ..................................................
FY454658       --> ..................................................
FY445690       --> ..................................................
FD560252       --> ..................................................
FD552933       --> ..................................................
EV543777       --> ..................................................

               51     -    101
UN16951        --> GTCTAAGGATCGTGTGGTCTCTTTAACTCTAGTCAGTCTTGTGCGTCTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- ..................................................
FD555839       <-- ..................................................
FD985810       <-- ..................................................
FD555904       <-- ..................................................
EY894349       <-- ..................................................
EY894013       <-- ..................................................
EV548017       <-- ..................................................
FD550506       <-- ..................................................
FD986396       --> GTCTAAGGATCGTGTGGTCTCTTTAACTCTAGTCAGTCTTGTGCGTCTCG
FD987476       --> GTCTAAGGATCGTGTGGTCTCTTTAACTCTAGTCAGTCTTGTGCGTCTCG
FD560329       --> GTCTAAGGATCGTGTGGTCTCTTTACCTCTAGTCAGTCTTGTGCGTCTCG
FD990122       --> ...............................gggAGTCTTGTGCGTCTCG
FY434825       --> ............................................GTCTCG
FY435767       --> ..............................................CTCG
FY450748       --> ..................................................
FY430403       --> ..................................................
FY433870       --> ..................................................
FY445671       --> ..................................................
FY447671       --> ..................................................
FY447644       --> ..................................................
FY432183       --> ..................................................
FY439316       --> ..................................................
EY898231       --> ..................................................
FY453911       --> ..................................................
FY454658       --> ..................................................
FY445690       --> ..................................................
FD560252       --> ..................................................
FD552933       --> ..................................................
EV543777       --> ..................................................

               101    -    151
UN16951        --> TCTCCTCGAAAGAGTGAAAAGAAAATCCAATCAATGGCGAAGGAGTTAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- ..................................................
FD555839       <-- ..................................................
FD985810       <-- ..................................................
FD555904       <-- ..................................................
EY894349       <-- ..................................................
EY894013       <-- ..................................................
EV548017       <-- ..................................................
FD550506       <-- ..................................................
FD986396       --> TCTCCTCGAAAGAGTGAAAAGAAAATCCAATCAATGGCGAAGGAGTTAGC
FD987476       --> TCTCCTCGAAAGAGTGAAAAGAAAATCCAATCAATGGCGAAGGAGTTAGC
FD560329       --> TCTCCTCGAAAGAGTGAAAAGAAAATCCAATCAATGGCGAAGGAGTTAGC
FD990122       --> TCTCCTCGAAAGAGTGAAAAGAAAATCCAATCAATGGCGAAGGAGTTAGC
FY434825       --> TCTCCTCGAAAGAGTGAAAAGAAAATCCAATCAATGGCGAAGGAGTTAGC
FY435767       --> TCTCCTCGAAAGA-TGAAAAGAAAATCCAATCAATGGCGAAGGAGTTAGC
FY450748       --> .............GTGAAAAGAAA-TCCAATCAATGGCGAAGGAGTTAGC
FY430403       --> .................AAAGAAAATCCA-TCAATGGCGAAGGAGTTAGC
FY433870       --> ................gAAAGAAA-TCCAATCAATGGCGAAGGAGTTAGC
FY445671       --> ................gAAAGAAA-TCCAATCAATGGCGAAGGAGTTAGC
FY447671       --> .................AAAGAAA-TCCAATCAATGGCGAAGGAGTTAGC
FY447644       --> ....................agAAATCCAATCAATGGCGAAGGAGTTAGC
FY432183       --> ............................AATCAATGGCGAAGGAGTTAGC
FY439316       --> ..............................TCAATGGCGAAGGAGTTAGC
EY898231       --> ................................................gg
FY453911       --> ..................................................
FY454658       --> ..................................................
FY445690       --> ..................................................
FD560252       --> ..................................................
FD552933       --> ..................................................
EV543777       --> ..................................................

               151    -    201
UN16951        --> GGAAAAAGCCAAAGAGGCCTTCTTAGATGACGACTTCGACGTTGCCGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- ..................................................
FD555839       <-- ..................................................
FD985810       <-- ..................................................
FD555904       <-- ..................................................
EY894349       <-- ..................................................
EY894013       <-- ..................................................
EV548017       <-- ..................................................
FD550506       <-- ..................................................
FD986396       --> GGAAAAAGCCAAAGAGGCCTTCTTAGATGACGACTTCGACGTCGCCGTTG
FD987476       --> GGAAAAAGCCAAAGAGGCCTTCTTAGATGACGACTTCGACGTCGCCGTTG
FD560329       --> GGAAAAAGCCAAAGAGGCCTTCTTAGATGACGACTTCGACGTTGCCGTTG
FD990122       --> GGAAAAAGCCAAAGAGGCCTTCTTAGATGACGACTTCGACGTTGCCGTTG
FY434825       --> GGAAAAAGCCAAAGAGGCCTTCTTAGATGACGACTTCGACGTTGCCGTTG
FY435767       --> GGAAAAAGCCAAAGAGGCCTTCTTAGATGACGACTTCGACGTTGCCGTTG
FY450748       --> GGAAAAAGCCAAAGAGGCCTTCTTAGATGACGACTTCGACGTTGCCGTTG
FY430403       --> GGAAAAAGCCAAAGAGGCCTTCTTAGATGACGACTTCGACGTTGCCGTTG
FY433870       --> GGAAAAAGCCAAAGAGGCCTTCTTAGATGACGACTTCGACGTTGCCGTTG
FY445671       --> GGAAAAAGCCAAAGAGGCCTTCTTAGATGACGACTTCGACGTTGCCGTTG
FY447671       --> GGAAAAAGCCAAAGAGGCCTTCTTAGATGACGACTTCGACGTTGCCGTTG
FY447644       --> GGAAAAAGCCAAAGAGGCCTTCTTAGATGACGACTTCGACGTTGCCGTTG
FY432183       --> GGAAAAAGCCAAAGAGGCCTTCTTAGATGACGACTTCGACGTTGCCGTTG
FY439316       --> GGAAAAAGCCAAAGAGGCCTTCTTAGATGACGACTTCGACGTTGCCGTTG
EY898231       --> GGAAAAAGCCAAAGAGGCCTTCTTAGATGACGACTTCGACGTTGCCGTTG
FY453911       --> ............AGAGGCCTTCTTAGATGACGACTTCGACGTTGCCGTTG
FY454658       --> ............AGAGGCCTTCTTAGATGACGACTTCGACGTTGCCGTTG
FY445690       --> ..................................................
FD560252       --> ..................................................
FD552933       --> ..................................................
EV543777       --> ..................................................

               201    -    251
UN16951        --> ACTTATACTCCAAAGCCATTGACTTGGATCCCAATTGCGCCGCCTTCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- ..................................................
FD555839       <-- ..................................................
FD985810       <-- ..................................................
FD555904       <-- ..................................................
EY894349       <-- ..................................................
EY894013       <-- ..................................................
EV548017       <-- ..................................................
FD550506       <-- ..................................................
FD986396       --> ACTTATACTCCAAAGCCATTGACTTGGATCCCAATTGCGCCGCCTTCTTC
FD987476       --> ACTTATACTCCAAAGCCATTGACTTGGATCCCAATTGCGCCGCCTTCTTC
FD560329       --> ACTTATACTCCAAAGCCATTGACTTGGATCCCAATTGCGCCGCCTTCTTC
FD990122       --> ACTTATACTCCAAAGCCATTGACTTGGATCCCAATTGCGCCGCCTTCTTC
FY434825       --> ACTTATACTCCAAAGCCATTGACTTGGATCCCAATTGCGCCGCCTTCTTC
FY435767       --> ACTTATACTCCAAAGCCATTGACTTGGATCCCAATTGCGCCGCCTTCTTC
FY450748       --> ACTTATACTCCAAAGCCATTGACTTGGATCCCAATTGCGCCGCCTTCTTC
FY430403       --> ACTTATACTCCAAAGCCATTGACTTGGATCCCAATTGCGCCGCCTTCTTC
FY433870       --> ACTTATACTCCAAAGCCATTGACTTGGATCCCAATTGCGCCGCCTTCTTC
FY445671       --> ACTTATACTCCAAAGCCATTGACTTGGATCCCAATTGCGCCGCCTTCTTC
FY447671       --> ACTTATACTCCAAAGCCATTGACTTGGATCCCAATTGCGCCGCCTTCTTC
FY447644       --> ACTTATACTCCAAAGCCATTGACTTGGATCCCAATTGCGCCGCCTTCTTC
FY432183       --> ACTTATACTCCAAAGCCATTGACTTGGATCCCAATTGCGCCGCCTTCTTC
FY439316       --> ACTTATACTCCAAAGCCATTGACTTGGATCCCAATTGCGCCGCCTTCTTC
EY898231       --> ACTTATACTCCAAAGCCATTGACTTGGATCCCAATTGCGCCGCCTTCTTC
FY453911       --> ACTTATACTCCAAAGCCATTGACTTGGATCCCAATTGCGCCGCCTTCTTC
FY454658       --> ACTTATACTCCAAAGCCATTGACTTGGATCCCAATTGCGCCGCCTTCTTC
FY445690       --> ..................................................
FD560252       --> ..................................................
FD552933       --> ..................................................
EV543777       --> ..................................................

               251    -    301
UN16951        --> GCCGATCGTGCTCAGGCCAACATCAAAATCCTTAATTTCACCGAAGCTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- ..................................................
FD555839       <-- ..................................................
FD985810       <-- ..................................................
FD555904       <-- ..................................................
EY894349       <-- ..................................................
EY894013       <-- ..................................................
EV548017       <-- ..................................................
FD550506       <-- ..................................................
FD986396       --> GCCGATCGTGCTCAGGCCAACATCAAAATCCTTAATT.............
FD987476       --> GCCGATCGTGCTCAGGCCAACATCAAAATCCTTAATTTCACCGAAGCTGT
FD560329       --> GCCGATCGTGCTCAGGCCAACATCAAAATCCTTAATTTCACCGAAGCTGT
FD990122       --> GCCGATCGTGCTCAGGCCAACATCAAAATCCTTAATTTCACCGAAGCTGT
FY434825       --> GCCGATCGTGCTCAGGCCAACATCAAAATCCTTAATTTCACCGAAGCTGT
FY435767       --> GCCGATCGTGCTCAGGCCAACATCAAAATCCTTAATTTCACCGAAGCTGT
FY450748       --> GCCGATCGTGCTCAGGCCAACATCAAAATCCTTAATTTCACCGAAGCTGT
FY430403       --> GCCGATCGTGCTCAGGCCAACATCAAAATCCTTAATTTCACCGAAGCTGT
FY433870       --> GCCGATCGTGCTCAGGCCAACATCAAAATCCTTAATTTCACCGAAGCTGT
FY445671       --> GCCGATCGTGCTCAGGCCAACATCAAAATCCTTAATTTCACCGAAGCTGT
FY447671       --> GCCGATCGTGCTCAGGCCAACATCAAAATCCTTAATTTCACCGAAGCTGT
FY447644       --> GCCGATCGTGCTCAGGCCAACATCAAAATCCTTAATTTCACCGAAGCTGT
FY432183       --> GCCGATCGTGCTCAGGCCAACATCAAAATCCTTAATTTCACCGAAGCTGT
FY439316       --> GCCGATCGTGCTCAGGCCAACATCAAAATCCTTAATTTCACCGAAGCTGT
EY898231       --> GCCGATCGTGCTCAGGCCAACATCAAAATCCTTAATTTCACCGAAGCTGT
FY453911       --> GCCGATCGTGCTCAGGCCAACATCAAAATCCTTAATTTCACCGAAGCTGT
FY454658       --> GCCGATCGTGCTCAGGCCAACATCAAAATCCTTAATTTCACCGAAGCTGT
FY445690       --> ..................................................
FD560252       --> ..................................................
FD552933       --> ..................................................
EV543777       --> ..................................................

               301    -    351
UN16951        --> TGCAGACGCCAACAAAGCCATAGAGTTGGAGCCGACGCTGGCTAAAGCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- ..................................................  Raphanus sativus cv GSK3-1
FD555839       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD985810       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD555904       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY894349       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY894013       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV548017       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD550506       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD986396       --> ..................................................  Raphanus raphanistrum subsp. landra
FD987476       --> TGCAGACGCCAACAAAGCCTTAGAGTTGGAGCCGACGTTGGCTAAAGCCT  Raphanus raphanistrum subsp. landra
FD560329       --> TGCAGACGCCAACAAAGCCATAGAGTTGGAGCCGACGTTGGCTAAAGCCT  Raphanus raphanistrum subsp. landra
FD990122       --> TGCAGACGCCAACAAAGCCATAGAGTTGGAGCCGACGTTGGCTAAAGCCT  Raphanus raphanistrum subsp. landra
FY434825       --> TGCAGACGCCAACAAAGCCATAGAGTTGGAGCCGACGCTGGCTAAAGCGT  Raphanus sativus cv GSK3-1
FY435767       --> TGCAGACGCCAACAAAGCCATAGAGTTGGAGCCGACGCTGGCTAAAGCGT  Raphanus sativus cv GSK3-1
FY450748       --> TGCAGACGCCAACAAAGCCATAGAGTTGGAGCCGACGCTGGCTAAAGCGT  Raphanus sativus cv GSK3-1
FY430403       --> TGCAGACGCCAACAAAGCCATAGAGTTGGAGCCGACGCTGGCTAAAGCGT  Raphanus sativus cv GSK3-1
FY433870       --> TGCAGACGCCAACAAAGCCATAGAGTTGGAGCCGACGCTGGCTAAAGCGT  Raphanus sativus cv GSK3-1
FY445671       --> TGCAGACGCCAACAAAGCCATAGAGTTGGAGCCGACGCTGGCTAAAGCGT  Raphanus sativus cv GSK3-1
FY447671       --> TGCAGACGCCAACAAAGCCATAGAGTTGGAGCCGACGCTGGCTAAAGCGT  Raphanus sativus cv GSK3-1
FY447644       --> TGCAGACGCCAACAAAGCCATAGAGTTGGAGCCGACGCTGGCTAAAGCGT  Raphanus sativus cv GSK3-1
FY432183       --> TGCAGACGCCAACAAAGCCATAGAGTTGGAGCCGACGCTGGCTAAAGCGT  Raphanus sativus cv GSK3-1
FY439316       --> TGCAGACGCCAACAAAGCCATAGAGTTGGAGCCGACGCTGGCTAAAGCGT  Raphanus sativus cv GSK3-1
EY898231       --> TGCAGACGCCAACAAAGCCATAGAGTTGGAGCCGACGTTGGCTAAAGCCT  Raphanus raphanistrum subsp. maritimus
FY453911       --> TGCAGACGCCAACAAAGCCATAGAGTTGGAGCCGACGCTGGCTAAAGCGT  Raphanus sativus cv GSK3-1
FY454658       --> TGCAGACGCCAACAAAGCCATAGAGTTGGAGCCGACGCTGGCTAAAGCGT  Raphanus sativus cv GSK3-1
FY445690       --> ..................................................  Raphanus sativus cv GSK3-1
FD560252       --> ..................................................  Raphanus raphanistrum subsp. landra
FD552933       --> ..................................................  Raphanus raphanistrum subsp. landra
EV543777       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               351    -    401
UN16951        --> ACCTCAGAAAAGGCACTGCTTGTATGAAGCTGGAGGAATACAGTACTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- ..................................................
FD555839       <-- ..................................................
FD985810       <-- ..................................................
FD555904       <-- ..................................................
EY894349       <-- ..................................................
EY894013       <-- ..................................................
EV548017       <-- ..................................................
FD550506       <-- ..................................................
FD986396       --> ..................................................
FD987476       --> ACCTCAGAAAAGGCACTGCTTGTATGAAGCTGGAGGAATACAGTACTGCT
FD560329       --> ACCTCAGAAAAGGCACTGCTTGTATGAAGCTGGAGGAATACAGTACTGCT
FD990122       --> ACCTCAGAAAAGGCACTGCTTGTATGAAGCTGGAGGAATACAGTACTGCT
FY434825       --> ACCTCAGAAAAGGCACTGCTTGTATGAAGCTGGAGGAATACAGTACTGCT
FY435767       --> ACCTCAGAAAAGGCACTGCTTGTATGAAGCTGGAGGAATACAGTACTGCT
FY450748       --> ACCTCAGAAAAGGCACTGCTTGTATGAAGCTGGAGGAATACAGTACTGCT
FY430403       --> ACCTCAGAAAAGGCACTGCTTGTATGAAGCTGGAGGAATACAGTACTGCT
FY433870       --> ACCTCAGAAAAGGCACTGCTTGTATGAAGCTGGAGGAATACAGTACTGCT
FY445671       --> ACCTCAGAAAAGGCACTGCTTGTATGAAGCTGGAGGAATACAGTACTGCT
FY447671       --> ACCTCAGAAAAGGCACTGCTTGTATGAAGCTGGAGGAATACAGTACTGCT
FY447644       --> ACCTCAGAAAAGGCACTGCTTGTATGAAGCTGGAGGAATACAGTACTGCT
FY432183       --> ACCTCAGAAAAGGCACTGCTTGTATGAAGCTGGAGGAATACAGTACTGCT
FY439316       --> ACCTCAGAAAAGGCACTGCTTGTATGAAGCTGGAGGAATACAGTACTGCT
EY898231       --> ACCTCAGAAAAGGCACTGCTTGTATGAAGCTGGAGGAATACAGTACTGCT
FY453911       --> ACCTCAGAAAAGGCACTGCTTGTATGAAGCTGGAGGAATACAGTACTGCT
FY454658       --> ACCTCAGAAAAGGCACTGCTTGTATGAAGCTGGAGGAATACAGTACTGCT
FY445690       --> ..................................................
FD560252       --> ..................................................
FD552933       --> ..................................................
EV543777       --> ..................................................

               401    -    451
UN16951        --> AAAGCAGCCCTTGAAAAGGGGGCTTCCGTTGCACCAAATGAATCAAAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- ..................................................
FD555839       <-- ..................................................
FD985810       <-- ..................................................
FD555904       <-- ..................................................
EY894349       <-- ..................................................
EY894013       <-- ..................................................
EV548017       <-- ..................................................
FD550506       <-- ..................................................
FD986396       --> ..................................................
FD987476       --> AAAGCAGCCCTTGAAAAGGGGGCTTCCGTTGCACCAAATGAATCAAAGTT
FD560329       --> AAAGCAGCCCTTGAAAAGGGGGCTTCCGTTGCACCAAATGAATCAAAGTT
FD990122       --> AAAGCAGCCCTTGAAAAGGGGGCTTCCGTTGCACCAAATGAATCAAAGTT
FY434825       --> AAAGCAGCCCTTGAAAAGGGGGCTTCCGTTGCACCAAATGAATCAAAGTT
FY435767       --> AAAGCAGCCCTTGAAAAGGGGGCTTCCGTTGCACCAAATGAATCAAAGTT
FY450748       --> AAAGCAGCCCTTGAAAAGGGGGCTTCCGTTGCACCAAATGAATCAAAGTT
FY430403       --> AAAGCAGCCCTTGAAAAGGGGGCTTCCGTTGCACCAAATGAATCAAAGTT
FY433870       --> AAAGCAGCCCTTGAAAAGGGGGCTTCCGTTGCACCAAATGAATCAAAGTT
FY445671       --> AAAGCAGCCCTTGAAAAGGGGGCTTCCGTTGCACCAAATGAATCAAAGTT
FY447671       --> AAAGCAGCCCTTGAAAAGGGGGCTTCCGTTGCACCAAATGAATCAAAGTT
FY447644       --> AAAGCAGCCCTTGAAAAGGGGGCTTCCGTTGCACCAAATGAATCAAAGTT
FY432183       --> AAAGCAGCCCTTGAAAAGGGGGCTTCCGTTGCACCAAATGAATCAAAGTT
FY439316       --> AAAGCAGCCCTTGAAAAGGGGGCTTCCGTTGCACCAAATGAATCAAAGTT
EY898231       --> AAAGCAGCCCTTGAAAAGGGGGCTTCCGTTGCACCAAATGAATCAAAGTT
FY453911       --> AAAGCAGCCCTTGAAAAGGGGGCTTCCGTTGCACCATATGAATCAAAGTT
FY454658       --> AAAGCAGCCCTTGAAAAGGGGGCTTCCGTTGCACCAAATGAATCAAAGTT
FY445690       --> ..................................................
FD560252       --> ..................................................
FD552933       --> ..................................................
EV543777       --> ..................................................

               451    -    501
UN16951        --> TAACAAGATGATCGATGAATGCAATCTTCACATTGCTGAAGAAGAGAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- ..................................................  Raphanus sativus cv GSK3-1
FD555839       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD985810       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD555904       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY894349       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY894013       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV548017       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD550506       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD986396       --> ..................................................  Raphanus raphanistrum subsp. landra
FD987476       --> TAAGAAGATGATAGATGAATGCAATCTTCACATTGCAGAAGAAGAGAAAG  Raphanus raphanistrum subsp. landra
FD560329       --> TAAGAAGATGATAGATGAATGCAATCTTCACATTGCAGAAGAAGAGAAAG  Raphanus raphanistrum subsp. landra
FD990122       --> TAAGAAGATGATAGATGAATGCAATCTTCACATTGCAGAAGAAGAGAAAG  Raphanus raphanistrum subsp. landra
FY434825       --> TAACAAGATGATCGATGAATGCAATCTTCACATTGCTGAAGAAGAGAAAG  Raphanus sativus cv GSK3-1
FY435767       --> TAACAAGATGATCGATGAATGCAATCTTCACATTGCTGAAGAAGAGAAAG  Raphanus sativus cv GSK3-1
FY450748       --> TAACAAGATGATCGATGAATGCAATCTTCACATTGCTGAAGAAGAGAAAG  Raphanus sativus cv GSK3-1
FY430403       --> TAACAAGATGATCGATGAATGCAATCTTCACATTGCTGAAGAAGAGAAAG  Raphanus sativus cv GSK3-1
FY433870       --> TAACAAGATGATCGATGAATGCAATCTTCACATTGCTGAAGAAGAGAAAG  Raphanus sativus cv GSK3-1
FY445671       --> TAACAAGATGATCGATGAATGCAATCTTCACATTGCTGAAGAAGAGAAAG  Raphanus sativus cv GSK3-1
FY447671       --> TAACAAGATGATCGATGAATGCAATCTTCACATTGCTGAAGAAGAGAAAG  Raphanus sativus cv GSK3-1
FY447644       --> TAACAAGATGATCGATGAATGCAATCTTCACATTGCTGAAGAAGAGAAAG  Raphanus sativus cv GSK3-1
FY432183       --> TAACAAGATGATCGATGAATGCAATCTTCACATTGCTGAAGAAGAGAAAG  Raphanus sativus cv GSK3-1
FY439316       --> TAACAAGATGATCGATGAATGCAATCTTCACATTGCTGAAGAAGAGAAAG  Raphanus sativus cv GSK3-1
EY898231       --> TAAGAAGATGATAGATGAATGCAATCTTCACATTGC---AGAAGAGAAAG  Raphanus raphanistrum subsp. maritimus
FY453911       --> TAACAAGATGATCGATGAATGCAATCTTCACATTGCTGAAGAAGAGAAAG  Raphanus sativus cv GSK3-1
FY454658       --> TAACAAGATGATCGATGAATGCAATCTTCACATTGCTGAAGAAGAGAAAG  Raphanus sativus cv GSK3-1
FY445690       --> ......GATGATCGATGAATGCAATCTTCACATTGCTGAAGAAGAGAAAG  Raphanus sativus cv GSK3-1
FD560252       --> ..................................................  Raphanus raphanistrum subsp. landra
FD552933       --> ..................................................  Raphanus raphanistrum subsp. landra
EV543777       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               501    -    551
UN16951        --> ATTTGGTTCAGCAGATGCCGCCCACCTTGCCTTCAAGCTCTACCACACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- ......................CACCTTGCCTTCAAGCTCTACCACACCA  Raphanus sativus cv GSK3-1
FD555839       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD985810       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD555904       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY894349       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY894013       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV548017       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD550506       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD986396       --> ..................................................  Raphanus raphanistrum subsp. landra
FD987476       --> ATTTGGTTCAGCAGATGCCCCCAACCTTGCCTTCAAGCTCTACCTCACCA  Raphanus raphanistrum subsp. landra
FD560329       --> ATTTGGTTCAGCAGATGCCCCCAACCTTGCCTTCAAGCTCTACCTCACCA  Raphanus raphanistrum subsp. landra
FD990122       --> ATTTGGTTCAGCAGATGCCCCCAACCTTGCCTTCAAGCTCTACCTCACCA  Raphanus raphanistrum subsp. landra
FY434825       --> ATTTGGTTCAGCAGATGCCGCCCACCTTGCCTTCAAGCTCTACCACACCA  Raphanus sativus cv GSK3-1
FY435767       --> ATTTGGTTCAGCAGATGCCGCCCACCTTGCCTTCAAGCTCTACCACACCA  Raphanus sativus cv GSK3-1
FY450748       --> ATTTGGTTCAGCAGATGCCGCCCACCTTGCCTTCAAGCTCTACCACACCA  Raphanus sativus cv GSK3-1
FY430403       --> ATTTGGTTCAGCAGATGCCGCCCACCTTGCCTTCAAGCTCTACCACACCA  Raphanus sativus cv GSK3-1
FY433870       --> ATTTGGTTCAGCAGATGCCGCCCACCTTGCCTTCAAGCTCTACCACACCA  Raphanus sativus cv GSK3-1
FY445671       --> ATTTGGTTCAGCAGATGCCGCCCACCTTGCCTTCAAGCTCTACCACACCA  Raphanus sativus cv GSK3-1
FY447671       --> ATTTGGTTCAGCAGATGCCGCCCACCTTGCCTTCAAGCTCTACCACACCA  Raphanus sativus cv GSK3-1
FY447644       --> ATTTGGTTCAGCAGATGCCGCCCACCTTGCCTTCAAGCTCTACCACACCA  Raphanus sativus cv GSK3-1
FY432183       --> ATTTGGTTCAGCAGATGCCGCCCACCTTGCCTTCAAGCTCTACCACACCA  Raphanus sativus cv GSK3-1
FY439316       --> ATTTGGTTCAGCAGATGCCGCCCACCTTGCCTTCAAGCTCTACCACACCA  Raphanus sativus cv GSK3-1
EY898231       --> ATTTGGTTCAGCAGATGCCCCCAACCTTGCCTTCAAGCTCTACCTCACCA  Raphanus raphanistrum subsp. maritimus
FY453911       --> ATTTGGTTCAGCAGATGCCGCCCACCTTGCCTTCAAGCTCTACCACACCA  Raphanus sativus cv GSK3-1
FY454658       --> ATTTGGTTCAGCAGATGCCGCCCACCTTGCCTTCAAGCTCTACCACACCA  Raphanus sativus cv GSK3-1
FY445690       --> ATTTGGTTCAGCAGATGCCGCCCACCTTGCCTTCAAGCTCTACCACACCA  Raphanus sativus cv GSK3-1
FD560252       --> ..................................................  Raphanus raphanistrum subsp. landra
FD552933       --> ..................................................  Raphanus raphanistrum subsp. landra
EV543777       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               551    -    601
UN16951        --> CCACTAGCAACGGCAGCTGATTCTCCGAGTCCTGCAGCGCCTGCCAAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- CCACTAGCAACGGCAGCTGATTCTCCGAGTCCTGCAGCGCCTGCCAAACC  Raphanus sativus cv GSK3-1
FD555839       <-- ......................gattctcctCTGCAGCA-CTGCCAAACC  Raphanus raphanistrum subsp. landra
FD985810       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD555904       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY894349       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY894013       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV548017       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD550506       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD986396       --> ..................................................  Raphanus raphanistrum subsp. landra
FD987476       --> CCACTAGCAGCGGCCGCTGATTCTCC---TCCTGCAGCACCTGCCAAACC  Raphanus raphanistrum subsp. landra
FD560329       --> CCACTAGCAGCGGCCGCTGATTCTCC---TCCTGCAGCACCTGCCAAACC  Raphanus raphanistrum subsp. landra
FD990122       --> CCACTAGCAGCGGCCGCTGATTCTCC---TCCTGCAGCACCTGCCAAACC  Raphanus raphanistrum subsp. landra
FY434825       --> CCACTAGCAACGGCAGCTGATTCTCCGAGTCCTGCAGCGCCTGCCAAACC  Raphanus sativus cv GSK3-1
FY435767       --> CCACTAGCAACGGCAGCTGATTCTCCGAGTCCTGCAGCGCCTGCCAAACC  Raphanus sativus cv GSK3-1
FY450748       --> CCACTAGCAACGGCAGCTGATTCTCCGAGTCCTGCAGCGCCTGCCAAACC  Raphanus sativus cv GSK3-1
FY430403       --> CCACTAGCAACGGCAGCTGATTCTCCGAGTCCTGCAGCGCCTGCCAAACC  Raphanus sativus cv GSK3-1
FY433870       --> CCACTAGCAACGGCAGCTGATTCTCCGAGTCCTGCAGCGCCTGCCAAACC  Raphanus sativus cv GSK3-1
FY445671       --> CCACTAGCAACGGCAGCTGATTCTCCGAGTCCTGCAGCGCCTGCCAAACC  Raphanus sativus cv GSK3-1
FY447671       --> CCACTAGCAACGGCAGCTGATTCTCCGAGTCCTGCAGCGCCTGCCAAACC  Raphanus sativus cv GSK3-1
FY447644       --> CCACTAGCAACGGCAGCTGATTCTCCGAGTCCTGCAGCGCCTGCCAAACC  Raphanus sativus cv GSK3-1
FY432183       --> CCACTAGCAACGGCAGCTGATTCTCCGAGTCCTGCAGCGCCTGCCAAACC  Raphanus sativus cv GSK3-1
FY439316       --> CCACTAGCAACGGCAGCTGATTCTCCGAGTCCTGCAGCGCCTGCCAAACC  Raphanus sativus cv GSK3-1
EY898231       --> CCACTAGCAGCGGCCGCTGATTCTCC---TCCTGCAGCACCTGCCAAACC  Raphanus raphanistrum subsp. maritimus
FY453911       --> CCACTAGCAACGGCAGCTGATTCTCCGAGTCCTGCAGCGCCTGCCAAACC  Raphanus sativus cv GSK3-1
FY454658       --> CCACTAGCAACGGCAGCTGATTCTCCGAGTCCTGCAGCGCCTGCCAAACC  Raphanus sativus cv GSK3-1
FY445690       --> CCACTAGCAACGGCAGCTGATTCTCCGAGTCCTGCAGCGCCTGCCAAACC  Raphanus sativus cv GSK3-1
FD560252       --> ........................tctccTCCTGCAGCACCTGCCAAACC  Raphanus raphanistrum subsp. landra
FD552933       --> ..................................................  Raphanus raphanistrum subsp. landra
EV543777       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               601    -    651
UN16951        --> CATGTTCAGACACGAGTTCTACCAGAAGCCGGAAGAAGTGGTGGTGACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- CATGTTCAGACACGAGTTCTACCAGAAGCCGGAAGAAGTGGTGGTGACAA
FD555839       <-- CATGTTCAGACACGAGTTCTACCAGAAGCCGGAAGAAGTGGTGGTGACAA
FD985810       <-- ....................................AGTGGTGGTGACAA
FD555904       <-- ..................................................
EY894349       <-- ..................................................
EY894013       <-- ..................................................
EV548017       <-- ..................................................
FD550506       <-- ..................................................
FD986396       --> ..................................................
FD987476       --> CATGTTCAGACACGAGTTCTACCAGAAGCCGGAAGAAGTGGTGGTGACGA
FD560329       --> CATGTTCAGACACGAGTTCTACCAGAAGCCGGAAGAAGTGGTGGTGACAA
FD990122       --> CATGTTCAGACACGAGTTCTACCAGAAGCCGGAAGAAGTGGTGGTGACAA
FY434825       --> CATGTTCAGACACGAGTTCTACCAGAAGCCGGAAGAAGTGGTGGTGACAA
FY435767       --> CATGTTCAGACACGAGTTCTACCAGAAGCCGGAAGAAGTGGTGGTGACAA
FY450748       --> CATGTTCAGACACGAGTTCTACCAGAAGCCGGAAGAAGTGGTGGTGACAA
FY430403       --> CATGTTCAGACACGAGTTCTACCAGAAGCCGGAAGAAGTGGTGGTGACAA
FY433870       --> CATGTTCAGACACGAGTTCTACCAGAAGCCGGAAGAAGTGGTGGTGACAA
FY445671       --> CATGTTCAGACACGAGTTCTACCAGAAGCCGGAAGAAGTGGTGGTGACAA
FY447671       --> CATGTTCAGACACGAGTTCTACCAGAAGCCGGAAGAAGTGGTGGTGACAA
FY447644       --> CATGTTCAGACACGAGTTCTACCAGAAGCCGGAAGAAGTGGTGGTGACAA
FY432183       --> CATGTTCAGACACGAGTTCTACCAGAAGCCGGAAGAAGTGGTGGTGACAA
FY439316       --> CATGTTCAGACACGAGTTCTACCAGAAGCCGGAAGAAGTGGTGGTGACAA
EY898231       --> CATGTTCAGACACGAGTTCTACCAGAAGCCGGAAGAAGTGGTGGTGACAA
FY453911       --> CATGTTCAGACACGAGTTCTACCAGAAGCCGGAAGAAGTGGTGGTGACAA
FY454658       --> CATGTTCAGACACGAGTTCTACCAGAAGCCGGAAGAAGTGGTGGTGACAA
FY445690       --> CATGTTCAGACACGAGTTCTACCAGAAGCCGGAAGAAGTGGTGGTGACAA
FD560252       --> CATGTTCAGACACGAGTTCTACCAGAAGCCGGAAGAAGTGGTGGTGACAA
FD552933       --> ..................................................
EV543777       --> ..................................................

               651    -    701
UN16951        --> TCTTCGCTAAAGGAATACCAAAGCAGAACGTGAATGTCGAGTTTGGTGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- TCTTCGCTAAAGGAATACCAAAGCAGAACGTGAATGTCGAGTTTGGTGAC  Raphanus sativus cv GSK3-1
FD555839       <-- TCTTCGCTAAAGGAATACCAAAGCAGAACGTGAATGTTGAGTTTGGTGAC  Raphanus raphanistrum subsp. landra
FD985810       <-- TCTTCGCTAAAGGAATACCAAAGCAGAACGTGAATGTTGAGTTTGGTGAC  Raphanus raphanistrum subsp. landra
FD555904       <-- ...................................gttGAGTTTGGTGAC  Raphanus raphanistrum subsp. landra
EY894349       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY894013       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV548017       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD550506       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD986396       --> ..................................................  Raphanus raphanistrum subsp. landra
FD987476       --> TCTTCGCTAAAG-AATACCAAAGCAGAACGTGAATGTTGAGTTTGGTGAC  Raphanus raphanistrum subsp. landra
FD560329       --> TCTTCGCTAAATGAATACCAAAGCAGAACGTGAATGTTGAGTTTGGTGAC  Raphanus raphanistrum subsp. landra
FD990122       --> TCTTC.............................................  Raphanus raphanistrum subsp. landra
FY434825       --> TCTTCGCTAAAGGAATACCAAAGCAGAACGTGAATGTCGAGTTTGGTGAC  Raphanus sativus cv GSK3-1
FY435767       --> TCTTCGCTAAAGGAATACCAAAGCAGAACGTGAATGTCGAGTTTGGTGAC  Raphanus sativus cv GSK3-1
FY450748       --> TCTTCGCTAAAGGAATACCAAAGCAGAACGTGAATGTCGAGTTTGGTGAC  Raphanus sativus cv GSK3-1
FY430403       --> TCTTCGCTAAAGGAATACCAAAGCAGAACGTGAATGTCGAGTTTGGTGAC  Raphanus sativus cv GSK3-1
FY433870       --> TCTTCGCTAAAGGAATACCAAAGCAGAACGTGAATGTCGAGTTTGGTGAC  Raphanus sativus cv GSK3-1
FY445671       --> TCTTCGCTAAAGGAATACCAAAGCAGAACGTGAATGTCGAGTTTGGTGAC  Raphanus sativus cv GSK3-1
FY447671       --> TCTTCGCTAAAGGAATACCAAAGCAGAACGTGAATGTCGAGTTTGGTGAC  Raphanus sativus cv GSK3-1
FY447644       --> TCTTCGCTAAAGGAATACCAAAGCAGAACGTGAATGTCGAGTTTGGTGAC  Raphanus sativus cv GSK3-1
FY432183       --> TCTTCGCTAAAGGAATACCAAAGCAGAACGTGAATGTCGAGTTTGGTGAC  Raphanus sativus cv GSK3-1
FY439316       --> TCTTCGCTAAAGGAATACCAAAGCAGAACGTGAATGTCGAGTTTGGTGAC  Raphanus sativus cv GSK3-1
EY898231       --> TCTTCGCTAAAGGAATACCAAAGCAGAACGTGAATGTTGAGTTTGGTGAC  Raphanus raphanistrum subsp. maritimus
FY453911       --> TCTTCGCTAAAGGAATACCAAAGCAGAACGTGAATGTCGAGTTTGGTGAC  Raphanus sativus cv GSK3-1
FY454658       --> TCTTCGCTAAAGGAATACCAAAGCAGAACGTGAATGTCGAGTTTGGTGAC  Raphanus sativus cv GSK3-1
FY445690       --> TCTTCGCTAAAGGAATACCAAAGCAGAACGTGAATGTCGAGTTTGGTGAC  Raphanus sativus cv GSK3-1
FD560252       --> TCTTCGCTAAAGGAATACCAAAGCAGAACGTGAATGTTGAGTTTGGTGAC  Raphanus raphanistrum subsp. landra
FD552933       --> ..................................................  Raphanus raphanistrum subsp. landra
EV543777       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               701    -    751
UN16951        --> CAGATTCTGAGTGTTGTGATTGATGTTGCTGGAGAGGAAGCTTATCACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- CAGATTCTGAGTGTTGTGATTGATGTTGCTGGAGAGGAAGCTTATCACTT
FD555839       <-- CAGATTCTGAGTGTTGTGATTGATGTTGCTGGAGAGGAAGCTTATCACTT
FD985810       <-- CAGATTCTGAGTGTTGTGATTGATGTTGCTGGAGAGGAAGCTTATCACTT
FD555904       <-- CAGATTCTGAGTGTTGTGATTGATGTTGCTGGAGAGGAAGCTTATCACTT
EY894349       <-- .............................................CACTT
EY894013       <-- ..................................................
EV548017       <-- ..................................................
FD550506       <-- ..................................................
FD986396       --> ..................................................
FD987476       --> -AGATTCTGAGTGTTGTGAT..............................
FD560329       --> CAGATTCTGAGTGTTGTGATTGATGTTGCTGGAGAGGAAGCTTATCACT.
FD990122       --> ..................................................
FY434825       --> CAGATTCTGAGTGTTGTGATTGATGTTGCTGGAGAGGAAGCTTATCACTT
FY435767       --> CAGATTCTGAGTGTTGTGATTGATGTTGCTGGAGAGGAAGCTTATCACTT
FY450748       --> CAGATTCTGAGTGTTGTGATTGATGTTGCTGGAGAGGAAGCTTATCACTT
FY430403       --> CAGATTCTGAGTGTTGTGATTGATGTTGCTGGAGAGGAAGCTTATCACTT
FY433870       --> CAGATTCTGAGTGTTGTGATTGATGTTGCTGGAGAGGAAGCTTATCACTT
FY445671       --> CAGATTCTGAGTGTTGTGATTGATGTTGCTGGAGAGGAAGCTTATCACTT
FY447671       --> CAGATTCTGAGTGTTGTGATTGATGTTGCTGGAGAGGAAGCTTATCACTT
FY447644       --> CAGATTCTGAGTGTTGTGATTGATGTTGCTGGAGAGGAAGCTTATCACTT
FY432183       --> CAGATTCTGAGTGTTGTGATTGATGTTGCTGGAGAGGAAGCTTATCACTT
FY439316       --> CAGATTCTGAGTGTTGTGATTGATGTTGCTGGAGAGGAAGCTTATCACTT
EY898231       --> CAGATTCTGAGTGTTGTGATTGATGTTGCTGGAGAGGAAGCTTATCACTT
FY453911       --> CAGATTCTGAGTGTTGTGATTGATGTTGCTGGAGAGGAAGCTTATCACTT
FY454658       --> CAGATTCTGAGTGTTGTGATTGATGTTGCTGGAGAGGAAGCTTATCACTT
FY445690       --> CAGATTCTGAGTGTTGTGATTGATGTTGCTGGAGAGGAAGCTTATCACTT
FD560252       --> CAGATTCTGAGTGTTGTGATTGATGTTGCTGGAGAGGAAGCTTATCACTT
FD552933       --> ..................................................
EV543777       --> ..................................................

               751    -    801
UN16951        --> CCAGCCAAGATTGTTTGGGAAGATAATACCAGAGAAGTGCAGGTATGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- CCAGCCAAGATTGTTTGGGAAGATAATACCAGAGAAGTGCAGGTATGAAG  Raphanus sativus cv GSK3-1
FD555839       <-- CCAGCCAAGATTGTTTGGGAAGATAATACCAGAGAAGTGCAGATATGAAG  Raphanus raphanistrum subsp. landra
FD985810       <-- CCAGCCAAGATTGTTTGGGAAGATAATACCAGAGAAGTGCAGATATGAAG  Raphanus raphanistrum subsp. landra
FD555904       <-- CCAGCCAAGATTGTTTGGGAAGATAATACCAGAGAAGTGCAGATATGAAG  Raphanus raphanistrum subsp. landra
EY894349       <-- CCAGCCAAGATTGTTTGGGAAGATAATACCAGAGAAGTGCAGATATGAAG  Raphanus raphanistrum subsp. maritimus
EY894013       <-- ..........................................aTATGAAG  Raphanus raphanistrum subsp. maritimus
EV548017       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD550506       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD986396       --> ..................................................  Raphanus raphanistrum subsp. landra
FD987476       --> ..................................................  Raphanus raphanistrum subsp. landra
FD560329       --> ..................................................  Raphanus raphanistrum subsp. landra
FD990122       --> ..................................................  Raphanus raphanistrum subsp. landra
FY434825       --> CCAGCCAAGATTGTTTGGGAAGATAATACCAGAGAAGTGCAGGTATGAAG  Raphanus sativus cv GSK3-1
FY435767       --> CCAGCCAAGATTGTTTGGGAAGATA-TACCAGAGAAGTGCAGGTATGAAG  Raphanus sativus cv GSK3-1
FY450748       --> CCAGCCAAGATTGTTTGGGAAGATAATACCAGAGAAGTGCAGGTATGAAG  Raphanus sativus cv GSK3-1
FY430403       --> CCAGCCAAGATTGTTTGGGAAGATAATACCAGAGAAGTGCAGGTATGAAG  Raphanus sativus cv GSK3-1
FY433870       --> CCAGCCAAGATTGTTTGGGAAGATAATACCAGAGAAGTGCAGGTATGAAG  Raphanus sativus cv GSK3-1
FY445671       --> CCAGCCAAGATTGTTTGGGAAGATAATACCAGAGAAGTGCAGGTATGAAG  Raphanus sativus cv GSK3-1
FY447671       --> CCAGCCAAGATTGTTTGGGAAGATAATACCAGAGAAGTGCAGGTATGAAG  Raphanus sativus cv GSK3-1
FY447644       --> CCAGCCAAGATTGTTTGGGAAGATAATACCAGAGAAGTGCAGGTATGAAG  Raphanus sativus cv GSK3-1
FY432183       --> CCAGCCAAGATTGTTTGGGAAGATAATACCAGAGAAGTGCAGGTATGAAG  Raphanus sativus cv GSK3-1
FY439316       --> CCAGCCAAGATTGTTTGGGAAGATAATACCAGAGAAGTGCAGGTATGAAG  Raphanus sativus cv GSK3-1
EY898231       --> CCAGCCAAGATTGTTTGGGAAGATAATACCAGAGAAGTGCAGATATGAAG  Raphanus raphanistrum subsp. maritimus
FY453911       --> CCAGCCAAGATTGTTTGGGAAGATAATACCAGAGAAGTGCAGGTATGAAG  Raphanus sativus cv GSK3-1
FY454658       --> CCAGCCAAGATTGTTTGGGAAGATAATACCAGAGAAGTGCAGGTATGAAG  Raphanus sativus cv GSK3-1
FY445690       --> CCAGCCAAGATTGTTTGGGAAGATAATACCAGAGAAGTGCAGGTATGAAG  Raphanus sativus cv GSK3-1
FD560252       --> CCAGCCAAGATTGTTTGGGAAGATAATACCAGAGAAGTGCAGATATGAAG  Raphanus raphanistrum subsp. landra
FD552933       --> ..................................................  Raphanus raphanistrum subsp. landra
EV543777       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               801    -    851
UN16951        --> TATTGTCAACCAAAGTTGAGATCCGTCTTGCAAAAGCAGAGATAGTCACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- TATTGTCAACCAAAGTTGAGATCCGTCTTGCAAAAGCAGAGATAGTCACT  Raphanus sativus cv GSK3-1
FD555839       <-- TATTGTCAACCAAAGTTGAGATCCGTCTTGCAAAAGCAGAGATGGTCACT  Raphanus raphanistrum subsp. landra
FD985810       <-- TATTGTCAACCAAAGTTGAGATCCGTCTTGCAAAAGCAGAGATGGTCACT  Raphanus raphanistrum subsp. landra
FD555904       <-- TATTGTCAACCAAAGTTGAGATCCGTCTTGCAAAAGCAGAGATGGTCACT  Raphanus raphanistrum subsp. landra
EY894349       <-- TATTGTCAACCAAAGTTGAGATCCGTCTTGCAAAAGCAGAGATGGTC-TT  Raphanus raphanistrum subsp. maritimus
EY894013       <-- TATTGTCAACCAAAGTTGAGATCCGTCTTGCAAAAGCAGAGATGGTCACT  Raphanus raphanistrum subsp. maritimus
EV548017       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD550506       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD986396       --> ..................................................  Raphanus raphanistrum subsp. landra
FD987476       --> ..................................................  Raphanus raphanistrum subsp. landra
FD560329       --> ..................................................  Raphanus raphanistrum subsp. landra
FD990122       --> ..................................................  Raphanus raphanistrum subsp. landra
FY434825       --> TATTGTCAACCAAAGTTGAGATCCGTCTTGCAAAAGCAGAGATAGTCACT  Raphanus sativus cv GSK3-1
FY435767       --> TATTGTCAACCAAAGTTGAGATCCGTCTT.....................  Raphanus sativus cv GSK3-1
FY450748       --> TATTGTCAACCAAAGTg.................................  Raphanus sativus cv GSK3-1
FY430403       --> TATTGTCAACCAAAGTTGAGATCCGTCTTGCAAAAGCAGAGATAGTCACT  Raphanus sativus cv GSK3-1
FY433870       --> TATTGTCAACCAAAGTTGAGATCCGTCTTGCAAAAGCAGAGATAGTCACT  Raphanus sativus cv GSK3-1
FY445671       --> TATTGTCAACCAAAGTTGAGATCCGTCTTGCAAAAGCAGAGATAGTCACT  Raphanus sativus cv GSK3-1
FY447671       --> TATTGTCAACCAAAGTTGAGATCCGTCTTGCAAAAGCAGAGATAGTCACT  Raphanus sativus cv GSK3-1
FY447644       --> TATTGTCAACCAAAGTTGAGATCCGTCTTGCAAAAGCAGAGATAGTCACT  Raphanus sativus cv GSK3-1
FY432183       --> TATTGTCAACCAAAGTTGAGATCCGTCTTGCAAAAGCAGAGATAGTCACT  Raphanus sativus cv GSK3-1
FY439316       --> TATTGTCAACCAAAGTTGAGATCCGTCTTGCAAAAGCAGAGATAGTCACT  Raphanus sativus cv GSK3-1
EY898231       --> TATTGTCAACCAAAGTTGAGATCCGTCTTGCAAAAGCAGAGATGGTC-TT  Raphanus raphanistrum subsp. maritimus
FY453911       --> TATTGTCAACCAAAGTTGAGATCCGTCTTGCAAAAGCAGAGATAGTCACT  Raphanus sativus cv GSK3-1
FY454658       --> TATTGTCAACCAAAGTTGAGATCCGTCTTGCAAAAGCAGAGATAGTCACT  Raphanus sativus cv GSK3-1
FY445690       --> TATTGTCAACCAAAGTTGAGATCCGTCTTGCAAAAGCAGAGATAGTCACT  Raphanus sativus cv GSK3-1
FD560252       --> TATTGTCAACCAAAGTTGAGATCCGTCTTGCAAAAGCAGAGATGGTCACT  Raphanus raphanistrum subsp. landra
FD552933       --> ..................................................  Raphanus raphanistrum subsp. landra
EV543777       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               851    -    901
UN16951        --> TGGGCCTCCCTTGAATATGGCAAAGGGCAAGCTCTTCTGCCTAAACCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- TGGGCCTCCCTTGAATATGGCAAAGGGCAAGCTCTTCTGCCTAAACCCAA
FD555839       <-- TGGGCCTCCCTTGAACATGGCAAAGGGCAAGCTCTTCTGCCTAAACCCAA
FD985810       <-- TGGGCCTCCCTTGAATATGGCAAAGGGCAAGCTCTTCTGCCTAAACCCAA
FD555904       <-- TGGGCCTCCCTTGAATATGGCAAAGGGCAAGCTCTTCTGCCTAAACCCAA
EY894349       <-- TGGGCCTCCCTTGAATATGGCAAAGGGCAAGCTCTTCTGCCTAAACCCAA
EY894013       <-- TGGGCCTCCCCTGAATATGGCAAAGGGCAAGCTCTTCTGCCTAAACCCAA
EV548017       <-- ..................................................
FD550506       <-- ..................................................
FD986396       --> ..................................................
FD987476       --> ..................................................
FD560329       --> ..................................................
FD990122       --> ..................................................
FY434825       --> TGGGCCTCCCTTGAATATGGCAAAGGGCAAGCTCTTCTGCCTAAACCCAA
FY435767       --> ..................................................
FY450748       --> ..................................................
FY430403       --> TGGGCCTCCCTTGAATATGGCAAAGGGCAAGCTCTTCTGCCTAAACCCAA
FY433870       --> TGGGCCTCCCTTGAATATGGCAAAGGGCAAGCTCTTCTGCCTAAACCCAA
FY445671       --> TGGGCCTCCCTTGAATATGGCAAAGGGCAAGCTCTTCTGCCTAAACCCAA
FY447671       --> TGGGCCTCCCTTGAATATGGCAAAGGGCAAGCTCTTCTGCCTAAACCCAA
FY447644       --> TGGGCCTCCCTTGAATATGGCAAAGGGCAAGCTCTTCTGCCTAAACCCAA
FY432183       --> TGGGCCTCCCTTGAATATGGCAAAGGGCAAGCTCTTCTGCCTAAACCCAA
FY439316       --> TGGGCCTCCCTTGAATATGGCAAAGGGCAAGCTCTTCTGCCTAAACCCAA
EY898231       --> TGGGCCTCCCTTGAATATGGCAAAGG-CAAGCTCTTCTGCCTAAACCCA-
FY453911       --> TGGGCCTCCCTTGAATATGGCAAAGGGCAAGCTCTTCTGCCTAAACCCAA
FY454658       --> TGGGCCTCCCTTGAATATGGCAAAGGGCAAGCTCTTCTGCCTAAACCCAA
FY445690       --> TGGGCCTCCCTTGAATATGGCAAAGGGCAAGCTCTTCTGCCTAAACCCAA
FD560252       --> TGGGCCTCCCTTGAACATGGCAAAGGGCAAGCTCTTCTGCCTAAACCCAA
FD552933       --> ..................................................
EV543777       --> ..................................................

               901    -    951
UN16951        --> TGTTGCATCAGCGGTTTCTCAGAGGCCGGTTTACCCATCATCTAAGCCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- TGTTGCATCAGCGGTTTCTCAGAGGCCGGTTTACCCATCATCTAAGCCGG
FD555839       <-- TGTTGCACCAGCGGTTTCTCAGAGGCCGGTTTACCTATCATTTAAGCCGG
FD985810       <-- TGTTGCATCAGCGGTTTCTCAGAGGCCGGTTTACCCATCATTTAAGCCGG
FD555904       <-- TGTTGCATCAGCGGTTTCTCAGAGGCCGGTTTACCCATCATCTAAGCCGG
EY894349       <-- TGTTGCATCAGCGGTTTCTCAGAGGCCGGTTTACCCATCATCTAAGCCGG
EY894013       <-- TGTTGCATCAGCGGTTTCTCAGAGGCCGGTTTACCCATCATCTAAGCCGG
EV548017       <-- ..................................................
FD550506       <-- ..................................................
FD986396       --> ..................................................
FD987476       --> ..................................................
FD560329       --> ..................................................
FD990122       --> ..................................................
FY434825       --> TGTTGCATCAGCGGTTTCTCAGAGGCCGGTTTACCCATCATCTAAGCCG.
FY435767       --> ..................................................
FY450748       --> ..................................................
FY430403       --> TGTTGCATCAGCGGTTTCTCAGAGGCCGGT....................
FY433870       --> TGTTGCATCAGCGGTTTCTCAGAGGCCGGTTTACCCATCATCTAAGCCGG
FY445671       --> TGTTGCATCAGCGGTTTCTCAGAGGCCGGTTTACCCATCATCTAAGCCGG
FY447671       --> TGTTGCATCAGCGGTTTCTCAGAGGCCGGGTTACCCATCATCTAAGCCGG
FY447644       --> TGTTGCATCAGCGGTTTCTCAGAGGCCGGTTTACCCATCATCTAAGCC..
FY432183       --> TGTTGCATCAGCGGTTTCTCAGAGGCCGGTTTACCCATCATCTAAGCCGG
FY439316       --> TGTTGCATCAGCGGTTTCTCAGAGGCCGGTTTACCCATCATCTAAGCCGG
EY898231       --> TGTTGCATCAGCGGTT..................................
FY453911       --> TGTTGCATCAGCGGTTTCTCAGAGGCCGGTTTACCCATCATCTAAGCCGG
FY454658       --> TGTTGCATCAGCGGTTTCTCAGAGGCCGGTTTACCCATCATCTAAGCCGG
FY445690       --> TGTTGCATCAGCGGTTTCTCAGAGGCCGGTTTACCCATCATCTAAGCCGG
FD560252       --> TGTTGCACCAGCGGTTTCTCAGAGGCCGGTTTACCTATCATCTAAGCCGG
FD552933       --> ..................................................
EV543777       --> ..................................................

               951    -   1001
UN16951        --> CTAAAGACTGGGACAAGCTAGAAGCTGAAGTGAAGAAACAGGAGAAGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- CTAAAGACTGGGACAAGTTAGAAGCTGAAGTGAAGAAACAGGAGAAGGAT  Raphanus sativus cv GSK3-1
FD555839       <-- CAAAAGACTGGGACAAGCTAGAAGCTGAAGTGAAGAAACAGGAGAAGGAT  Raphanus raphanistrum subsp. landra
FD985810       <-- CAAAAGACTGGGACAAGCTAGAAGCTGAAGTGAAGAAACAGGAGAAGGAT  Raphanus raphanistrum subsp. landra
FD555904       <-- CAAAAGACTGGGACAAGCTAGAAGCTGAAGTGAAGAAACAGGAGAAGGAT  Raphanus raphanistrum subsp. landra
EY894349       <-- CAAAAGACTGGGACAAGCTAGAAGCTGAAGTGAAGAAACAGGAGAAGGAT  Raphanus raphanistrum subsp. maritimus
EY894013       <-- CAAAAGACTGGGACAAGCTAGAAGCTGAAGTGAAGAAACAGGAGAAGGAT  Raphanus raphanistrum subsp. maritimus
EV548017       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD550506       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD986396       --> ..................................................  Raphanus raphanistrum subsp. landra
FD987476       --> ..................................................  Raphanus raphanistrum subsp. landra
FD560329       --> ..................................................  Raphanus raphanistrum subsp. landra
FD990122       --> ..................................................  Raphanus raphanistrum subsp. landra
FY434825       --> ..................................................  Raphanus sativus cv GSK3-1
FY435767       --> ..................................................  Raphanus sativus cv GSK3-1
FY450748       --> ..................................................  Raphanus sativus cv GSK3-1
FY430403       --> ..................................................  Raphanus sativus cv GSK3-1
FY433870       --> CTAAAG............................................  Raphanus sativus cv GSK3-1
FY445671       --> CT................................................  Raphanus sativus cv GSK3-1
FY447671       --> CTAAAGA...........................................  Raphanus sativus cv GSK3-1
FY447644       --> ..................................................  Raphanus sativus cv GSK3-1
FY432183       --> CTAAAGACT.........................................  Raphanus sativus cv GSK3-1
FY439316       --> CTAAAGA...........................................  Raphanus sativus cv GSK3-1
EY898231       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY453911       --> CTAAAGACTGGGACAAGTTAGAAGCT........................  Raphanus sativus cv GSK3-1
FY454658       --> CTAAAGACTGGGACAAGTTAGAAGCTGAAGTGAAGAAACAGGAGAAGGAT  Raphanus sativus cv GSK3-1
FY445690       --> CTAAAGACTGGGACAAGTTAGAAGCTGAAGTGAAGAAACAGGAGAAGGAT  Raphanus sativus cv GSK3-1
FD560252       --> CAAAAGACTGGGACAAGCTAGAAGCTGAAGTGAAGAAACAGGAGAAGGAT  Raphanus raphanistrum subsp. landra
FD552933       --> ..................................................  Raphanus raphanistrum subsp. landra
EV543777       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               1001   -   1051
UN16951        --> GAGAAGCTAGATGGAGATGCAGCTATGAACAAGTTTTTCAGCGATATATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- GAGAAGCTAGATGGAGATGCAGCTATGAACAAGTTTTTCAGCGATATATA
FD555839       <-- GAGAAGCTAGATGGAGATGCAGCTATGAACAAGTTTTTCAGCGATATATA
FD985810       <-- GAGAAGCTAGATGGAGATGCAGCTATGAACAAGTTTTTCAGCGATATATA
FD555904       <-- GAGAAGCTAGATGGAGATGCAGCTATGAACAAGTTTTTCAGCGATATATA
EY894349       <-- GAGAAGCTAGATGGAGATGCAGCTATGAACAAGTTTTTCAGCGATATATA
EY894013       <-- GAGAAGCTAGATGGAGATGCAGCTATGAACAAGTTTTTCAGCGATATATA
EV548017       <-- ..................................................
FD550506       <-- ..................................................
FD986396       --> ..................................................
FD987476       --> ..................................................
FD560329       --> ..................................................
FD990122       --> ..................................................
FY434825       --> ..................................................
FY435767       --> ..................................................
FY450748       --> ..................................................
FY430403       --> ..................................................
FY433870       --> ..................................................
FY445671       --> ..................................................
FY447671       --> ..................................................
FY447644       --> ..................................................
FY432183       --> ..................................................
FY439316       --> ..................................................
EY898231       --> ..................................................
FY453911       --> ..................................................
FY454658       --> GAGAAGCTAGATGGAGATGCAGCT..........................
FY445690       --> GAGAAGCTAGATGGAGATGCAGCTATGAACAAGTTTTTCAGCGATATATA
FD560252       --> GAGAAGCTAGATGGAGATGCAGCTATGAACAAGTTTTTCAGCGATATATA
FD552933       --> ..................................................
EV543777       --> ..................................................

               1051   -   1101
UN16951        --> CCAGAGTGCGGATGAGGACATGAGGCGAGCCATGAACAAATCATTTGCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- CCAGAGTGCTGATGAGGACATGAGGCGAGCCATGAACAAATCATTTGCGG
FD555839       <-- CCAGAGTGCGGATGAGGACATGAGGCGAGCCATGAACAAATCATTTGCGG
FD985810       <-- CCAGAGTGCGGATGAGGACATGAGGCGAGCCATGAACAAATCATTTGCGG
FD555904       <-- CCAGAGTGCGGATGAGGACATGAGGCGAGCCATGAACAAATCATTTGCGG
EY894349       <-- CCAGAGTGCGGATGAGGACATGAGGCGAGCCATGAACAAATCATTTGCGG
EY894013       <-- CCAGAGTGCGGATGAGGACATGAGGCGAGCCATGAACAAATCATTTGCGG
EV548017       <-- ..................................................
FD550506       <-- ..................................................
FD986396       --> ..................................................
FD987476       --> ..................................................
FD560329       --> ..................................................
FD990122       --> ..................................................
FY434825       --> ..................................................
FY435767       --> ..................................................
FY450748       --> ..................................................
FY430403       --> ..................................................
FY433870       --> ..................................................
FY445671       --> ..................................................
FY447671       --> ..................................................
FY447644       --> ..................................................
FY432183       --> ..................................................
FY439316       --> ..................................................
EY898231       --> ..................................................
FY453911       --> ..................................................
FY454658       --> ..................................................
FY445690       --> CCAGAGTGCTGATGAGGACATGAGGCGAGCCATGAACAAATCATTTGCGG
FD560252       --> CCAGAGTGCGGATGAGGACATGAGGCGAGCCATGAACAAATCATTTGCGG
FD552933       --> ..................................................
EV543777       --> ..................................................

               1101   -   1151
UN16951        --> AGTCAAATGGGACAGTGCTGTCTACTAACTGGAAAGAGGTTGGGACTAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- AGTCAAATGGGACAGTGCTGTCTACGAACTGGAAAGAGGTTGGGACTAAG
FD555839       <-- AGTCAAATGGGACAGTGCTGTCTACTAACTGGAAAGAGGTTGGGACTAAG
FD985810       <-- AGTCAAATGGGACAGTGCTGTCTACTAACTGGAAAGAGGTTGGGACTAAG
FD555904       <-- AGTCAAATGGGACAGTGCTGTCTACTAACTGGAAAGAGGTTGGGACTAAG
EY894349       <-- AGTCAAATGTGACAGTGCTGTCTACTAACTGGAAAGAGGTTGGGACTAAG
EY894013       <-- AGTCAAATGGGACAGTGCTGTCTATTAACTGGAAAGAGGTTGGGACTAAG
EV548017       <-- ..................................................
FD550506       <-- ..................................................
FD986396       --> ..................................................
FD987476       --> ..................................................
FD560329       --> ..................................................
FD990122       --> ..................................................
FY434825       --> ..................................................
FY435767       --> ..................................................
FY450748       --> ..................................................
FY430403       --> ..................................................
FY433870       --> ..................................................
FY445671       --> ..................................................
FY447671       --> ..................................................
FY447644       --> ..................................................
FY432183       --> ..................................................
FY439316       --> ..................................................
EY898231       --> ..................................................
FY453911       --> ..................................................
FY454658       --> ..................................................
FY445690       --> AGTCAAATGGGACAGTGCTGTCTACGAACTGGAAAGAGGTTGGGACTAAG
FD560252       --> AGTCAAATGGGACAGTGCTGTCTACTAACTGGAAAGAGGTTGGGACTAAG
FD552933       --> ..................................................
EV543777       --> ..................................................

               1151   -   1201
UN16951        --> AAAGTGGAGAGCACTCCACCAGATGGCATGGAGCTTAAGAAATGGGAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- AAAGTGGAGAGCACTCCACCAGATGGCATGGAGCTTAAGAAATGGGAGTA
FD555839       <-- AAAGTGGAGAGCACTCCACCAGATGGCATGAAGCTTAAGAAATGGGAGTA
FD985810       <-- AAAGTGGAGAGCACTCCACCAGATGGCATGGAGCTTAAGAAATGGGAGTA
FD555904       <-- AAAGTGGAGAGCACTCCACCAGATGGCATGGAGCTTAAGAAATGGGAGTA
EY894349       <-- AAAGTGGAGAGCACTCCACCAGATGGCATGGAGCTTAAGAAATGGGAGTA
EY894013       <-- AAAGTGGAGAGCACTCCACCAGATGGCATGGAGCTTAAGAAATGGGAGTA
EV548017       <-- ..................................................
FD550506       <-- ..................................................
FD986396       --> ..................................................
FD987476       --> ..................................................
FD560329       --> ..................................................
FD990122       --> ..................................................
FY434825       --> ..................................................
FY435767       --> ..................................................
FY450748       --> ..................................................
FY430403       --> ..................................................
FY433870       --> ..................................................
FY445671       --> ..................................................
FY447671       --> ..................................................
FY447644       --> ..................................................
FY432183       --> ..................................................
FY439316       --> ..................................................
EY898231       --> ..................................................
FY453911       --> ..................................................
FY454658       --> ..................................................
FY445690       --> AAAGTGGAGAGCACTCCACCAGATGGCATGGAGCTTAAGAAATGGGAGTA
FD560252       --> AAAGTGGAGAGCACTCCACCAGATGGCATGAAGCTTAAGAAATGGGAGTA
FD552933       --> ..................................................
EV543777       --> ..................................................

               1201   -   1251
UN16951        --> TTGATGATCTTTTTAAATCATGGCCTTGTCAAATATCTCTGAAGTTTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- TTGATGATCTTTTTAAATACTGGTCTTGTCAAAAATCTCTGAAGTTTCTT
FD555839       <-- TTGATGATCTTTTTAAATCATGGCCTTGTCAAATATCTCTGAAGTTTCTT
FD985810       <-- TTGATGATCTTTTTAAATCATGGCCTCGTCAAATATCTCTGAAGTTTCTT
FD555904       <-- TTGATGATCTTTTTAAATCATGGCCTTGTCAAATATCTCTGAAGTTTCTT
EY894349       <-- TTGATGATCTTTTTAAATCATGGCCTTGTCAAATATCTCTGAAGTTTCTT
EY894013       <-- TTGATGATCTTTTTAAATCATGGCCTTGTCAAATATCTCTGAAGTTTCTT
EV548017       <-- ..................................................
FD550506       <-- ..................................................
FD986396       --> ..................................................
FD987476       --> ..................................................
FD560329       --> ..................................................
FD990122       --> ..................................................
FY434825       --> ..................................................
FY435767       --> ..................................................
FY450748       --> ..................................................
FY430403       --> ..................................................
FY433870       --> ..................................................
FY445671       --> ..................................................
FY447671       --> ..................................................
FY447644       --> ..................................................
FY432183       --> ..................................................
FY439316       --> ..................................................
EY898231       --> ..................................................
FY453911       --> ..................................................
FY454658       --> ..................................................
FY445690       --> TTGATGATCTTTTTAAATACTGGTCTTGTCAAAAATCTCTGAAGTTTCTT
FD560252       --> TTGATGATCTTTTTAAATCATGGCCTTGTCAAATATCTCTGAAGTTTCTT
FD552933       --> ..................................................
EV543777       --> ..................................................

               1251   -   1301
UN16951        --> TTGGTTTTTCAAGTGCATTCGTTGTGGTTTGAGAAAACGTTTTGATAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- TTGGTTTTTCAAGTGGATTCGTTGTGGTTTGAGAAAACGTTTTGGTAGTG
FD555839       <-- TTGGCTTTTCAAGTGCATTCGTTGTGGTTTGAGAAAACGTTTTGATAGTG
FD985810       <-- TTGGTTTTTCAAGTGCATTCGTTGTGGTTTGAGAAAACGTTTTGATAGTG
FD555904       <-- TTGGTTTTTCAAGTGCATTCGTTGTGGTTTGAGAAAACGTTTTGATAGTG
EY894349       <-- TTGGTTTTTCAAGTGCATTCGTTGTGGTTTGAGAAAACGTTTTGATAGTG
EY894013       <-- TTGGTTTTTCAAGTGCATTCGTTGTGGTTTGAGAAAACGTTTTGATAGTG
EV548017       <-- ..................................................
FD550506       <-- ..................................................
FD986396       --> ..................................................
FD987476       --> ..................................................
FD560329       --> ..................................................
FD990122       --> ..................................................
FY434825       --> ..................................................
FY435767       --> ..................................................
FY450748       --> ..................................................
FY430403       --> ..................................................
FY433870       --> ..................................................
FY445671       --> ..................................................
FY447671       --> ..................................................
FY447644       --> ..................................................
FY432183       --> ..................................................
FY439316       --> ..................................................
EY898231       --> ..................................................
FY453911       --> ..................................................
FY454658       --> ..................................................
FY445690       --> TTGGTTTTTCAAGTGGATTCGTTGTGGTTTGAGAAAACGTTTTGGTAGTG
FD560252       --> TTGGCTTT-C-AGTGCATTCGTTG..........................
FD552933       --> ..................................................
EV543777       --> ..................................................

               1301   -   1351
UN16951        --> TACTAGAAGACCTCGCAAGTTGGTGTTTTTTT-CACTT--CTTCTCCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- TACTAGAAGAGCTCGCAAGTTGGTGTTTTTTTACATTTTTCTTCTCCCTC
FD555839       <-- TACTAGAAGACCTCGCAAGTTGGTGTTTTTTT-CACTT--CTTCTCCCTC
FD985810       <-- TACTAGAAGACCTCGCAAGTTGGTGTTTTTTT-CACTT--CTTCTCCCTC
FD555904       <-- TACTAGAAGACCTCGCAAGTTGGTGTTTTTTT-CACTT--CTTCTCCCTC
EY894349       <-- TACTAGAAGACCTCGCAAGTTGGTGTTTTTTT-CACTT--CTTCTCCCTC
EY894013       <-- TACTAGAAGACCTCGCAAGTTGGTTTTTTTTT-CACTT--CTTCTCCCTC
EV548017       <-- ..................................................
FD550506       <-- ..................................................
FD986396       --> ..................................................
FD987476       --> ..................................................
FD560329       --> ..................................................
FD990122       --> ..................................................
FY434825       --> ..................................................
FY435767       --> ..................................................
FY450748       --> ..................................................
FY430403       --> ..................................................
FY433870       --> ..................................................
FY445671       --> ..................................................
FY447671       --> ..................................................
FY447644       --> ..................................................
FY432183       --> ..................................................
FY439316       --> ..................................................
EY898231       --> ..................................................
FY453911       --> ..................................................
FY454658       --> ..................................................
FY445690       --> TACT..............................................
FD560252       --> ..................................................
FD552933       --> ..................................................
EV543777       --> ..................................................

               1351   -   1401
UN16951        --> GAGAGAGGGCTTTTAGTGACAATCTTGCATTGTTATCTTAAGTTAGATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- GAGAGAGGGCTTTTAATGACAATCTTG.......................
FD555839       <-- GAGAGAGGGCTTTTAGTGAC..............................
FD985810       <-- GAGAGAGGGCTTTTAGTGACAATCTTGCATTGTTATCT............
FD555904       <-- GAGAGAGGGCTTTTAGTGACAATCTTGCATTGTTATCTc...........
EY894349       <-- GAGAGAGGGCTTTTAGTGAC..............................
EY894013       <-- GAGAGAGGGCTTTTAGTGACAATCTTGCATTGTTATCTTAAGTTAGATTA
EV548017       <-- ..................................................
FD550506       <-- ..................................................
FD986396       --> ..................................................
FD987476       --> ..................................................
FD560329       --> ..................................................
FD990122       --> ..................................................
FY434825       --> ..................................................
FY435767       --> ..................................................
FY450748       --> ..................................................
FY430403       --> ..................................................
FY433870       --> ..................................................
FY445671       --> ..................................................
FY447671       --> ..................................................
FY447644       --> ..................................................
FY432183       --> ..................................................
FY439316       --> ..................................................
EY898231       --> ..................................................
FY453911       --> ..................................................
FY454658       --> ..................................................
FY445690       --> ..................................................
FD560252       --> ..................................................
FD552933       --> .................................................A
EV543777       --> ..................................................

               1401   -   1451
UN16951        --> TAAACCCAACTTTATTAAGTTGAATAAATGCGGTAACCATTACAAAAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- ..................................................
FD555839       <-- ..................................................
FD985810       <-- ..................................................
FD555904       <-- ..................................................
EY894349       <-- ..................................................
EY894013       <-- TAAACCCAACTTTATTAAGTCGAATAAATGCGGTAACCATTAC.......
EV548017       <-- ..................................................
FD550506       <-- ..................................................
FD986396       --> ..................................................
FD987476       --> ..................................................
FD560329       --> ..................................................
FD990122       --> ..................................................
FY434825       --> ..................................................
FY435767       --> ..................................................
FY450748       --> ..................................................
FY430403       --> ..................................................
FY433870       --> ..................................................
FY445671       --> ..................................................
FY447671       --> ..................................................
FY447644       --> ..................................................
FY432183       --> ..................................................
FY439316       --> ..................................................
EY898231       --> ..................................................
FY453911       --> ..................................................
FY454658       --> ..................................................
FY445690       --> ..................................................
FD560252       --> ..................................................
FD552933       --> TAAACCCAACTTTATTAAGTTGAATAAATGCGGTAACCATTACAAAAACA
EV543777       --> ................................GTAACCATTACAAAAACA

               1451   -   1501
UN16951        --> ATCTAACAAAACCAAAATCTTTGTTTCAAATTTTAATTAAACAAAACAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- ..................................................
FD555839       <-- ..................................................
FD985810       <-- ..................................................
FD555904       <-- ..................................................
EY894349       <-- ..................................................
EY894013       <-- ..................................................
EV548017       <-- ..................................................
FD550506       <-- ..................................................
FD986396       --> ..................................................
FD987476       --> ..................................................
FD560329       --> ..................................................
FD990122       --> ..................................................
FY434825       --> ..................................................
FY435767       --> ..................................................
FY450748       --> ..................................................
FY430403       --> ..................................................
FY433870       --> ..................................................
FY445671       --> ..................................................
FY447671       --> ..................................................
FY447644       --> ..................................................
FY432183       --> ..................................................
FY439316       --> ..................................................
EY898231       --> ..................................................
FY453911       --> ..................................................
FY454658       --> ..................................................
FY445690       --> ..................................................
FD560252       --> ..................................................
FD552933       --> ATCTAACAAAACCAAAATCTTTGTTTCAAATTTCAATTAAACAAAACAAC
EV543777       --> ATCTAACAAAACCAAAATCTTTGTTTCAAATTTTAATTAAACAAAACAAC

               1501   -   1551
UN16951        --> CTAGTAAACAATCGGTGTTGCCTCAAATCACCTACATTACATTGACCCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- ..................................................
FD555839       <-- ..................................................
FD985810       <-- ..................................................
FD555904       <-- ..................................................
EY894349       <-- ..................................................
EY894013       <-- ..................................................
EV548017       <-- ..............GTGTTGCCTCAAATCAC-TACATTACATTGACCCTA
FD550506       <-- ..................................................
FD986396       --> ..................................................
FD987476       --> ..................................................
FD560329       --> ..................................................
FD990122       --> ..................................................
FY434825       --> ..................................................
FY435767       --> ..................................................
FY450748       --> ..................................................
FY430403       --> ..................................................
FY433870       --> ..................................................
FY445671       --> ..................................................
FY447671       --> ..................................................
FY447644       --> ..................................................
FY432183       --> ..................................................
FY439316       --> ..................................................
EY898231       --> ..................................................
FY453911       --> ..................................................
FY454658       --> ..................................................
FY445690       --> ..................................................
FD560252       --> ..................................................
FD552933       --> CTAGTAAACAATCGGTGTTGCCTCAAATCACCTACATTACATTGACCCTA
EV543777       --> CTAGTAAACAATCGGTGTTGCCTCAAATCACCTACATTACATTGACCCTA

               1551   -   1601
UN16951        --> AAGCTTGAACCAATCGGCTTCACTCTTCTTTCACTCTTCTCTTGATACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- ..................................................
FD555839       <-- ..................................................
FD985810       <-- ..................................................
FD555904       <-- ..................................................
EY894349       <-- ..................................................
EY894013       <-- ..................................................
EV548017       <-- AAGCTTGAACCAATCGGCTTCACTCTTCTTTCACTCTTCTCTTGATACTC
FD550506       <-- ..................................................
FD986396       --> ..................................................
FD987476       --> ..................................................
FD560329       --> ..................................................
FD990122       --> ..................................................
FY434825       --> ..................................................
FY435767       --> ..................................................
FY450748       --> ..................................................
FY430403       --> ..................................................
FY433870       --> ..................................................
FY445671       --> ..................................................
FY447671       --> ..................................................
FY447644       --> ..................................................
FY432183       --> ..................................................
FY439316       --> ..................................................
EY898231       --> ..................................................
FY453911       --> ..................................................
FY454658       --> ..................................................
FY445690       --> ..................................................
FD560252       --> ..................................................
FD552933       --> AAGCTTGAACCAATCGGCTTCACTCTTCTTTCACTCTTCTCTTGATACTC
EV543777       --> AAGCTTGAACCAATCGGCTTCACTCTTCCTTCACTCTTCTCTTGATACTC

               1601   -   1651
UN16951        --> CATTGATATTAATGTCTCAACCACCTTTTACTCCCTTATGAGGTGGTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- ..................................................
FD555839       <-- ..................................................
FD985810       <-- ..................................................
FD555904       <-- ..................................................
EY894349       <-- ..................................................
EY894013       <-- ..................................................
EV548017       <-- CATTGATATTAATGTCTCAACCACTTTTTACTCCCTTATGAGGTGGTGTT
FD550506       <-- ..................................................
FD986396       --> ..................................................
FD987476       --> ..................................................
FD560329       --> ..................................................
FD990122       --> ..................................................
FY434825       --> ..................................................
FY435767       --> ..................................................
FY450748       --> ..................................................
FY430403       --> ..................................................
FY433870       --> ..................................................
FY445671       --> ..................................................
FY447671       --> ..................................................
FY447644       --> ..................................................
FY432183       --> ..................................................
FY439316       --> ..................................................
EY898231       --> ..................................................
FY453911       --> ..................................................
FY454658       --> ..................................................
FY445690       --> ..................................................
FD560252       --> ..................................................
FD552933       --> CATTGATATTAATGTCTCAACCACCTTTTACTCCCTTATGAGGTGGTGTT
EV543777       --> CATTGATATTAATGTCTCAACCACCTTTTACTCCCTTATGAGGTGGTGTT

               1651   -   1701
UN16951        --> CCTGGCCTATGAACGTTGTTGTTGTATCCAAAATTTCCTTTCTTCTCAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- ..................................................
FD555839       <-- ..................................................
FD985810       <-- ..................................................
FD555904       <-- ..................................................
EY894349       <-- ..................................................
EY894013       <-- ..................................................
EV548017       <-- CCTGGCCTATGAACGTTGTTGTTGTATCCAAAATTTCCTTTCTTCTCAGT
FD550506       <-- ..................................................
FD986396       --> ..................................................
FD987476       --> ..................................................
FD560329       --> ..................................................
FD990122       --> ..................................................
FY434825       --> ..................................................
FY435767       --> ..................................................
FY450748       --> ..................................................
FY430403       --> ..................................................
FY433870       --> ..................................................
FY445671       --> ..................................................
FY447671       --> ..................................................
FY447644       --> ..................................................
FY432183       --> ..................................................
FY439316       --> ..................................................
EY898231       --> ..................................................
FY453911       --> ..................................................
FY454658       --> ..................................................
FY445690       --> ..................................................
FD560252       --> ..................................................
FD552933       --> CCTGGCCTATGAACGTTGTTGTTGTATCCAAAATTTCCTTTCTTCTCAGT
EV543777       --> CCTGGCCTATGAACGTTGTTGTTGTATCCAAAATTTCCTTTCTTCTCAGT

               1701   -   1751
UN16951        --> TGACTTGAGGATTTGGAATGAACATGTCAAACTATCATCAACACTCATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- ..................................................
FD555839       <-- ..................................................
FD985810       <-- ..................................................
FD555904       <-- ..................................................
EY894349       <-- ..................................................
EY894013       <-- ..................................................
EV548017       <-- TGACTTGAGGATTTGGAATGAACATGTCAAACTATCATCAACACTCATCA
FD550506       <-- ..................................................
FD986396       --> ..................................................
FD987476       --> ..................................................
FD560329       --> ..................................................
FD990122       --> ..................................................
FY434825       --> ..................................................
FY435767       --> ..................................................
FY450748       --> ..................................................
FY430403       --> ..................................................
FY433870       --> ..................................................
FY445671       --> ..................................................
FY447671       --> ..................................................
FY447644       --> ..................................................
FY432183       --> ..................................................
FY439316       --> ..................................................
EY898231       --> ..................................................
FY453911       --> ..................................................
FY454658       --> ..................................................
FY445690       --> ..................................................
FD560252       --> ..................................................
FD552933       --> TGACTTGAGGATTTGGAATGAACATGTCAAACTATCATCAACACTCATCA
EV543777       --> TGACTTGAGGATTTGGAATGAACATGTCAAACTATCATCAACACTCATCA

               1751   -   1801
UN16951        --> TTGCGCCAGCATTGTCAAACTCACCACAGTAGTTAGGTGCAGAGAATATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- ..................................................
FD555839       <-- ..................................................
FD985810       <-- ..................................................
FD555904       <-- ..................................................
EY894349       <-- ..................................................
EY894013       <-- ..................................................
EV548017       <-- TTGCGCCAGCATTGTCAAACTCACCACAGTAGTTAGGTGCAGAGAATATT
FD550506       <-- ..................................................
FD986396       --> ..................................................
FD987476       --> ..................................................
FD560329       --> ..................................................
FD990122       --> ..................................................
FY434825       --> ..................................................
FY435767       --> ..................................................
FY450748       --> ..................................................
FY430403       --> ..................................................
FY433870       --> ..................................................
FY445671       --> ..................................................
FY447671       --> ..................................................
FY447644       --> ..................................................
FY432183       --> ..................................................
FY439316       --> ..................................................
EY898231       --> ..................................................
FY453911       --> ..................................................
FY454658       --> ..................................................
FY445690       --> ..................................................
FD560252       --> ..................................................
FD552933       --> TTGCGCCAGCATTGTCAAACTCACCACAGTAGTTAGGTGCAGAGAATATT
EV543777       --> TTGCGCCAGCATTGTCAAACTCACCACAGTAGTTAGGTGCAGAGAATATT

               1801   -   1851
UN16951        --> GTCACCAGTTGTCTCTTCGCAAAGAACTCGTATCCATCTTCTACAACCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- ..................................................
FD555839       <-- ..................................................
FD985810       <-- ..................................................
FD555904       <-- ..................................................
EY894349       <-- ..................................................
EY894013       <-- ..................................................
EV548017       <-- GTCACCAGTTGTCTCTTCGCAAAGAACTCGTATCCATCTTCTACAACCTG
FD550506       <-- ..................................................
FD986396       --> ..................................................
FD987476       --> ..................................................
FD560329       --> ..................................................
FD990122       --> ..................................................
FY434825       --> ..................................................
FY435767       --> ..................................................
FY450748       --> ..................................................
FY430403       --> ..................................................
FY433870       --> ..................................................
FY445671       --> ..................................................
FY447671       --> ..................................................
FY447644       --> ..................................................
FY432183       --> ..................................................
FY439316       --> ..................................................
EY898231       --> ..................................................
FY453911       --> ..................................................
FY454658       --> ..................................................
FY445690       --> ..................................................
FD560252       --> ..................................................
FD552933       --> GTCACCAGTTGTCTCTTCGCAAAGAACTCATATCCATCTTCTACAACCTG
EV543777       --> GTCACCAGTTGTCTCTTCGCAAAGAACTCGTATCCATCTTCTACAACCTG

               1851   -   1901
UN16951        --> ATGAGCTCGGCAAACAAGATCAAGGTCATGAGTCTGAAGGAACTCAGCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- ..................................................
FD555839       <-- ..................................................
FD985810       <-- ..................................................
FD555904       <-- ..................................................
EY894349       <-- ..................................................
EY894013       <-- ..................................................
EV548017       <-- ATGAGCTCGGCAAACAAGATCAAGGTCATGAGTCTGAAGGAACTCAGCCA
FD550506       <-- .TGAGCTCGGCAAACAAGATCAAGGTCATGAGTCTGAAGGAACTCAGCCA
FD986396       --> ..................................................
FD987476       --> ..................................................
FD560329       --> ..................................................
FD990122       --> ..................................................
FY434825       --> ..................................................
FY435767       --> ..................................................
FY450748       --> ..................................................
FY430403       --> ..................................................
FY433870       --> ..................................................
FY445671       --> ..................................................
FY447671       --> ..................................................
FY447644       --> ..................................................
FY432183       --> ..................................................
FY439316       --> ..................................................
EY898231       --> ..................................................
FY453911       --> ..................................................
FY454658       --> ..................................................
FY445690       --> ..................................................
FD560252       --> ..................................................
FD552933       --> ATGAGCTCGGCAAACAAGATCAAGGTCATGAGTCTGAAGGAACTCAGCCA
EV543777       --> ATGAGCTCGGCAAACAAGATCAAGGTCATGAGTCTGAAGGAACTCAGCCA

               1901   -   1951
UN16951        --> CTTTGTCAGGACCAAATGTATAAGACACACCTCTGTCATTCTCCCCCCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- ..................................................
FD555839       <-- ..................................................
FD985810       <-- ..................................................
FD555904       <-- ..................................................
EY894349       <-- ..................................................
EY894013       <-- ..................................................
EV548017       <-- CTTTGTCAGGACCAAATGTATAAGACACACCTCTGTCATTCTCCCCCCAG
FD550506       <-- CTTTGTCAGGACCAAATGTATAAGACACACCTCTGTCATTCTCCCCCCAG
FD986396       --> ..................................................
FD987476       --> ..................................................
FD560329       --> ..................................................
FD990122       --> ..................................................
FY434825       --> ..................................................
FY435767       --> ..................................................
FY450748       --> ..................................................
FY430403       --> ..................................................
FY433870       --> ..................................................
FY445671       --> ..................................................
FY447671       --> ..................................................
FY447644       --> ..................................................
FY432183       --> ..................................................
FY439316       --> ..................................................
EY898231       --> ..................................................
FY453911       --> ..................................................
FY454658       --> ..................................................
FY445690       --> ..................................................
FD560252       --> ..................................................
FD552933       --> CTTTGTCAGGACCAAATGTATAAGACACACCTCTGTCATTCTCCCCCCAG
EV543777       --> CTTTGTCAGGACCAAATGTATAAGACACACCTCTGTCATTCTCCCCCCA.

               1951   -   2001
UN16951        --> CCTTGGATTTCTTTGTCAGGATCAGCCCATAACAAATCGCAAAGGACTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- ..................................................
FD555839       <-- ..................................................
FD985810       <-- ..................................................
FD555904       <-- ..................................................
EY894349       <-- ..................................................
EY894013       <-- ..................................................
EV548017       <-- CCTTGGATTTCTTTGTCAGGATCAGCCCATAACAAATCGCAAAGGACTCC
FD550506       <-- CCTTGGATTTCTTTGTCAGGATCAGCCCATAACAAATCGCAAAGGACTCC
FD986396       --> ..................................................
FD987476       --> ..................................................
FD560329       --> ..................................................
FD990122       --> ..................................................
FY434825       --> ..................................................
FY435767       --> ..................................................
FY450748       --> ..................................................
FY430403       --> ..................................................
FY433870       --> ..................................................
FY445671       --> ..................................................
FY447671       --> ..................................................
FY447644       --> ..................................................
FY432183       --> ..................................................
FY439316       --> ..................................................
EY898231       --> ..................................................
FY453911       --> ..................................................
FY454658       --> ..................................................
FY445690       --> ..................................................
FD560252       --> ..................................................
FD552933       --> CCTCGGATTTCTTTGTCAGGATCAGCCCATAACAAATCGCAAAGGACTCC
EV543777       --> ..................................................

               2001   -   2051
UN16951        --> CTGATCAGGAACATCAACAGGACGAGGAATCCGCCTTATATCATCCAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- ..................................................
FD555839       <-- ..................................................
FD985810       <-- ..................................................
FD555904       <-- ..................................................
EY894349       <-- ..................................................
EY894013       <-- ..................................................
EV548017       <-- CTGATCAGGAACATCAACAGGACGAGGAATCCGCCTTATATCATCCAAGC
FD550506       <-- CTGATCAGGAACATCAACAGGACGAGGAATCCGCCTTATATCATCCAAGC
FD986396       --> ..................................................
FD987476       --> ..................................................
FD560329       --> ..................................................
FD990122       --> ..................................................
FY434825       --> ..................................................
FY435767       --> ..................................................
FY450748       --> ..................................................
FY430403       --> ..................................................
FY433870       --> ..................................................
FY445671       --> ..................................................
FY447671       --> ..................................................
FY447644       --> ..................................................
FY432183       --> ..................................................
FY439316       --> ..................................................
EY898231       --> ..................................................
FY453911       --> ..................................................
FY454658       --> ..................................................
FY445690       --> ..................................................
FD560252       --> ..................................................
FD552933       --> CTGATCAGGAACATCAACAGGACGAGGAATCCGCCTTATATCATCCAGGC
EV543777       --> ..................................................

               2051   -   2101
UN16951        --> TCTTCAGATCAGGCGATAGTCCACCGTGCATACAGAGGATCTTGTCGTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- ..................................................
FD555839       <-- ..................................................
FD985810       <-- ..................................................
FD555904       <-- ..................................................
EY894349       <-- ..................................................
EY894013       <-- ..................................................
EV548017       <-- TCTTCAGATCAGGCGATAGTCCACCGTGCATACAGGGGATCTTGTCGTCG
FD550506       <-- TCTTCAGATCAGGCGATAGTCCACCGCGCATAAAGAGGATCTTGTCGTCG
FD986396       --> ..................................................
FD987476       --> ..................................................
FD560329       --> ..................................................
FD990122       --> ..................................................
FY434825       --> ..................................................
FY435767       --> ..................................................
FY450748       --> ..................................................
FY430403       --> ..................................................
FY433870       --> ..................................................
FY445671       --> ..................................................
FY447671       --> ..................................................
FY447644       --> ..................................................
FY432183       --> ..................................................
FY439316       --> ..................................................
EY898231       --> ..................................................
FY453911       --> ..................................................
FY454658       --> ..................................................
FY445690       --> ..................................................
FD560252       --> ..................................................
FD552933       --> TCTTTAGATCAGGCGATAGTCCACCGTGCATACAGAGGATCTTGTCGTCG
EV543777       --> ..................................................

               2101   -   2151
UN16951        --> ATGAGAGCAGCAACAGGCAGACAGTTGAAACAGTCGGTGAAACTCTTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- ..................................................
FD555839       <-- ..................................................
FD985810       <-- ..................................................
FD555904       <-- ..................................................
EY894349       <-- ..................................................
EY894013       <-- ..................................................
EV548017       <-- ATGAGAGCAGCAACAGGCAGACAGTTGAAACAGTCGGTGAAACTCTTCCA
FD550506       <-- ATGAGAGCAGCAACAGGCAGACAGTTGAAACAGTCGGTGAAACTCTTCCA
FD986396       --> ..................................................
FD987476       --> ..................................................
FD560329       --> ..................................................
FD990122       --> ..................................................
FY434825       --> ..................................................
FY435767       --> ..................................................
FY450748       --> ..................................................
FY430403       --> ..................................................
FY433870       --> ..................................................
FY445671       --> ..................................................
FY447671       --> ..................................................
FY447644       --> ..................................................
FY432183       --> ..................................................
FY439316       --> ..................................................
EY898231       --> ..................................................
FY453911       --> ..................................................
FY454658       --> ..................................................
FY445690       --> ..................................................
FD560252       --> ..................................................
FD552933       --> ATGAGAGCAGC.......................................
EV543777       --> ..................................................

               2151   -   2201
UN16951        --> CAGGCGCACATTATATCTTCTCTTGCACTCATCGTAGAATCCGTAAACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- ..................................................
FD555839       <-- ..................................................
FD985810       <-- ..................................................
FD555904       <-- ..................................................
EY894349       <-- ..................................................
EY894013       <-- ..................................................
EV548017       <-- CAGGCGCACATTATATCTTCTCTTGCACTCATCGTAGAATCCGTAAACAC
FD550506       <-- CAGGCGCACATTATATCTTCTCTTGCACTCATCGTAGAATCCGTAAACAC
FD986396       --> ..................................................
FD987476       --> ..................................................
FD560329       --> ..................................................
FD990122       --> ..................................................
FY434825       --> ..................................................
FY435767       --> ..................................................
FY450748       --> ..................................................
FY430403       --> ..................................................
FY433870       --> ..................................................
FY445671       --> ..................................................
FY447671       --> ..................................................
FY447644       --> ..................................................
FY432183       --> ..................................................
FY439316       --> ..................................................
EY898231       --> ..................................................
FY453911       --> ..................................................
FY454658       --> ..................................................
FY445690       --> ..................................................
FD560252       --> ..................................................
FD552933       --> ..................................................
EV543777       --> ..................................................

               2201   -   2251
UN16951        --> GGTTGATTGAAGCGCATTCATGATTGCCTCTGAGAAGAAAGAAGTTGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- ..................................................
FD555839       <-- ..................................................
FD985810       <-- ..................................................
FD555904       <-- ..................................................
EY894349       <-- ..................................................
EY894013       <-- ..................................................
EV548017       <-- GGTTGATTGAAGCGCATTCATGATTGCCTCTGAGAAGAAAGAAGTTGAGC
FD550506       <-- GGTTGATTGAAGCGCATTCATGATTGCCTCTGAGAAGAAAGAAGTTGAGC
FD986396       --> ..................................................
FD987476       --> ..................................................
FD560329       --> ..................................................
FD990122       --> ..................................................
FY434825       --> ..................................................
FY435767       --> ..................................................
FY450748       --> ..................................................
FY430403       --> ..................................................
FY433870       --> ..................................................
FY445671       --> ..................................................
FY447671       --> ..................................................
FY447644       --> ..................................................
FY432183       --> ..................................................
FY439316       --> ..................................................
EY898231       --> ..................................................
FY453911       --> ..................................................
FY454658       --> ..................................................
FY445690       --> ..................................................
FD560252       --> ..................................................
FD552933       --> ..................................................
EV543777       --> ..................................................

               2251   -   2301
UN16951        --> TTGTATTTGAGCTTGTAGGCAAGAAGAAGACATATGGTCTCTATGCTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- ..................................................
FD555839       <-- ..................................................
FD985810       <-- ..................................................
FD555904       <-- ..................................................
EY894349       <-- ..................................................
EY894013       <-- ..................................................
EV548017       <-- TTGTATTTGAGCTTGTAGGCAAGAAGAAGACATATGGTCTCTATGCTCTG
FD550506       <-- TTGTATTTGAGCTTGTAGGCAAGAAGAAGACATATGGTCTCTATGCTCTG
FD986396       --> ..................................................
FD987476       --> ..................................................
FD560329       --> ..................................................
FD990122       --> ..................................................
FY434825       --> ..................................................
FY435767       --> ..................................................
FY450748       --> ..................................................
FY430403       --> ..................................................
FY433870       --> ..................................................
FY445671       --> ..................................................
FY447671       --> ..................................................
FY447644       --> ..................................................
FY432183       --> ..................................................
FY439316       --> ..................................................
EY898231       --> ..................................................
FY453911       --> ..................................................
FY454658       --> ..................................................
FY445690       --> ..................................................
FD560252       --> ..................................................
FD552933       --> ..................................................
EV543777       --> ..................................................

               2301   -   2351
UN16951        --> CTTACCACGATCAACATAGTCCCCGAGGAACAAGTAGTTCGCAGCTGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- ..................................................
FD555839       <-- ..................................................
FD985810       <-- ..................................................
FD555904       <-- ..................................................
EY894349       <-- ..................................................
EY894013       <-- ..................................................
EV548017       <-- CTTACC............................................
FD550506       <-- CTTACCACGATCAACATAGTCCCCGAGGAACAAGTAGTTCGCAGCTGGAG
FD986396       --> ..................................................
FD987476       --> ..................................................
FD560329       --> ..................................................
FD990122       --> ..................................................
FY434825       --> ..................................................
FY435767       --> ..................................................
FY450748       --> ..................................................
FY430403       --> ..................................................
FY433870       --> ..................................................
FY445671       --> ..................................................
FY447671       --> ..................................................
FY447644       --> ..................................................
FY432183       --> ..................................................
FY439316       --> ..................................................
EY898231       --> ..................................................
FY453911       --> ..................................................
FY454658       --> ..................................................
FY445690       --> ..................................................
FD560252       --> ..................................................
FD552933       --> ..................................................
EV543777       --> ..................................................

               2351   -   2401
UN16951        --> GATAGCCACCATACTCAAACAATCGCAAGAGGTCTGGAAACTGACCATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- ..................................................
FD555839       <-- ..................................................
FD985810       <-- ..................................................
FD555904       <-- ..................................................
EY894349       <-- ..................................................
EY894013       <-- ..................................................
EV548017       <-- ..................................................
FD550506       <-- GATAGCCACCATACTCAAACAATCGCAAGAGGTCTGGAAACTGACCATGA
FD986396       --> ..................................................
FD987476       --> ..................................................
FD560329       --> ..................................................
FD990122       --> ..................................................
FY434825       --> ..................................................
FY435767       --> ..................................................
FY450748       --> ..................................................
FY430403       --> ..................................................
FY433870       --> ..................................................
FY445671       --> ..................................................
FY447671       --> ..................................................
FY447644       --> ..................................................
FY432183       --> ..................................................
FY439316       --> ..................................................
EY898231       --> ..................................................
FY453911       --> ..................................................
FY454658       --> ..................................................
FY445690       --> ..................................................
FD560252       --> ..................................................
FD552933       --> ..................................................
EV543777       --> ..................................................

               2401   -   2451
UN16951        --> ACATCACCGCAAATCTTGATAGGAGCCTCAAGCTCGAGGAGATTAGGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- ..................................................
FD555839       <-- ..................................................
FD985810       <-- ..................................................
FD555904       <-- ..................................................
EY894349       <-- ..................................................
EY894013       <-- ..................................................
EV548017       <-- ..................................................
FD550506       <-- ACATCACCGCAAATCTTGATAGGAGCCTCAAGCTCGAGGAGATTAGGCTG
FD986396       --> ..................................................
FD987476       --> ..................................................
FD560329       --> ..................................................
FD990122       --> ..................................................
FY434825       --> ..................................................
FY435767       --> ..................................................
FY450748       --> ..................................................
FY430403       --> ..................................................
FY433870       --> ..................................................
FY445671       --> ..................................................
FY447671       --> ..................................................
FY447644       --> ..................................................
FY432183       --> ..................................................
FY439316       --> ..................................................
EY898231       --> ..................................................
FY453911       --> ..................................................
FY454658       --> ..................................................
FY445690       --> ..................................................
FD560252       --> ..................................................
FD552933       --> ..................................................
EV543777       --> ..................................................

               2451   -   2501
UN16951        --> GCTGAGAAAAACGTCTTTGGAAGTAGAGCAGAGCTGGCGTATCTCCACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- ..................................................
FD555839       <-- ..................................................
FD985810       <-- ..................................................
FD555904       <-- ..................................................
EY894349       <-- ..................................................
EY894013       <-- ..................................................
EV548017       <-- ..................................................
FD550506       <-- GCTGAGAAAAACGTCTTTGGAAGTAGAGCAGAGCTGGCGTATCTCCACAT
FD986396       --> ..................................................
FD987476       --> ..................................................
FD560329       --> ..................................................
FD990122       --> ..................................................
FY434825       --> ..................................................
FY435767       --> ..................................................
FY450748       --> ..................................................
FY430403       --> ..................................................
FY433870       --> ..................................................
FY445671       --> ..................................................
FY447671       --> ..................................................
FY447644       --> ..................................................
FY432183       --> ..................................................
FY439316       --> ..................................................
EY898231       --> ..................................................
FY453911       --> ..................................................
FY454658       --> ..................................................
FY445690       --> ..................................................
FD560252       --> ..................................................
FD552933       --> ..................................................
EV543777       --> ..................................................

               2501   -   2551
UN16951        --> CAAGTAGCTTCGCCTGCTTCACCGTCCTCCCGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444354       <-- ...................................
FD555839       <-- ...................................
FD985810       <-- ...................................
FD555904       <-- ...................................
EY894349       <-- ...................................
EY894013       <-- ...................................
EV548017       <-- ...................................
FD550506       <-- CAAGTAGCTTCGCCTGCTTCACCGTCCTCCCGTTC
FD986396       --> ...................................
FD987476       --> ...................................
FD560329       --> ...................................
FD990122       --> ...................................
FY434825       --> ...................................
FY435767       --> ...................................
FY450748       --> ...................................
FY430403       --> ...................................
FY433870       --> ...................................
FY445671       --> ...................................
FY447671       --> ...................................
FY447644       --> ...................................
FY432183       --> ...................................
FY439316       --> ...................................
EY898231       --> ...................................
FY453911       --> ...................................
FY454658       --> ...................................
FY445690       --> ...................................
FD560252       --> ...................................
FD552933       --> ...................................
EV543777       --> ...................................