RadishBase

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Alignment for radish unigene UN16965

               1      -     51
UN16965        --> GCCAACCAATTGAGAATTTGCAGACAGTGTGTGGGCTGTTTTGTGTCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431390       <-- ..................................................
FY434161       <-- ..................................................
FY431403       <-- ..................................................
EW728949       <-- ..................................................
FD975327       <-- ..................................................
FD539708       <-- ..................................................
EW738375       <-- ..................................................
EY936134       <-- ..................................................
EX891713       <-- ..................................................
EX908975       <-- ..................................................
EX887597       --> GCCAACCAATTGAGAATTTGCAGACAGTGTGTGGGCTGTTTTGTGTCTTT
EW724282       --> ...................................ggGTTTTGTGTCTTT
FD562143       --> ..................................................
EY941898       --> ..................................................
FD549674       --> ..................................................
FY450450       --> ..................................................
FD971162       --> ..................................................
FD979245       --> ..................................................
FD544007       --> ..................................................
EY940365       --> ..................................................
EW734540       --> ..................................................
FD964719       --> ..................................................

               51     -    101
UN16965        --> TCTGGGCCTCCAAAGGATATTTCTTCTTCTCCTCACTCCCTTTCACTATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431390       <-- ..................................................
FY434161       <-- ..................................................
FY431403       <-- ..................................................
EW728949       <-- ..................................................
FD975327       <-- ..................................................
FD539708       <-- ..................................................
EW738375       <-- ..................................................
EY936134       <-- ..................................................
EX891713       <-- ..................................................
EX908975       <-- ..................................................
EX887597       --> TCTGGGCCTCCAAAGGATATTTCTTCTTCTCCTCACTCCCTTTCACTATT
EW724282       --> TCTGGGCCTCCAAAGGATATTTCTTCTTCTCCTCACTCCCTTTCACTATT
FD562143       --> ..................................................
EY941898       --> ..................................................
FD549674       --> ..................................................
FY450450       --> ..................................................
FD971162       --> ..................................................
FD979245       --> ..................................................
FD544007       --> ..................................................
EY940365       --> ..................................................
EW734540       --> ..................................................
FD964719       --> ..................................................

               101    -    151
UN16965        --> ATTATAAACCCAGAAAACCATCTCCTCCTCCTGCTCCTCAATCATTCGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431390       <-- ..................................................
FY434161       <-- ..................................................
FY431403       <-- ..................................................
EW728949       <-- ..................................................
FD975327       <-- ..................................................
FD539708       <-- ..................................................
EW738375       <-- ..................................................
EY936134       <-- ..................................................
EX891713       <-- ..................................................
EX908975       <-- ..................................................
EX887597       --> ATTATAAACCCAGAAAACCATCTCCTCCTCCTGCTCCTCAATCATTCGTT
EW724282       --> ATTATAAACCCAGAAAACCATCTCCTCCTCCTGCTCCTCAATCATTCGTT
FD562143       --> ..................................ggCTCAATCATTCGTT
EY941898       --> .....................................ggAATCATTCGTT
FD549674       --> .....................................ggAATCATTCGTT
FY450450       --> ..................................................
FD971162       --> ..................................................
FD979245       --> ..................................................
FD544007       --> ..................................................
EY940365       --> ..................................................
EW734540       --> ..................................................
FD964719       --> ..................................................

               151    -    201
UN16965        --> TTCTCGATTTGCGATCTAATTCATAATCCAAATTCTTATTCATTGCCATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431390       <-- ..................................................
FY434161       <-- ..................................................
FY431403       <-- ..................................................
EW728949       <-- ..................................................
FD975327       <-- ..................................................
FD539708       <-- ..................................................
EW738375       <-- ..................................................
EY936134       <-- ..................................................
EX891713       <-- ..................................................
EX908975       <-- ..................................................
EX887597       --> TTCTCGATTTGCGATCTAATTCATAATCCAAATTCTTATTCATTGACATG
EW724282       --> TTCTCGATTTGCGATCTAATTCATAATCCAAATTCTTATTCATTGACATG
FD562143       --> TTCTCGATTTGCGATCTAGTTCATAATCCAAATTCTTATCCATTGCCATG
EY941898       --> TTCTCGATTTGCGATCTAATTCATAATCCAAATTCTTATTCATTGACATG
FD549674       --> TTCTCGATTTGCGATCTAATTCATAATCCAAATTCTTATTCATTGCCATG
FY450450       --> .......gTTGCGATCTAATTCATAATCCAAATTCTTATTCATTGCCATG
FD971162       --> ..................................................
FD979245       --> ..................................................
FD544007       --> ..................................................
EY940365       --> ..................................................
EW734540       --> ..................................................
FD964719       --> ..................................................

               201    -    251
UN16965        --> GCTCTCTCAACTCCTCTTTCTCAGATGTCTGTTGCACTTCCTATTGGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431390       <-- ..................................................
FY434161       <-- ..................................................
FY431403       <-- ..................................................
EW728949       <-- ..................................................
FD975327       <-- ..................................................
FD539708       <-- ..................................................
EW738375       <-- ..................................................
EY936134       <-- ..................................................
EX891713       <-- ..................................................
EX908975       <-- ..................................................
EX887597       --> GCTCTCTCAACTCCTCTTTCTCAGATGTCTGTTGCACTTCCTATTGGAAT
EW724282       --> GCTCTCTCAACTCCTCTTTCTCAGATGTCTGTTGCACTTCCTATTGGAAT
FD562143       --> GCTCTCTCAACTCCTCTTTCTCAGATATCTGTTGCACTTCCTATTGGAAT
EY941898       --> GCTCTCTCAACTCCTCTTTCTCAGATGTCTGTTGCACTTCCTATTGGAAT
FD549674       --> GCTCTCTCAACTCCTCTTTCTCAGATATCTGTTGCACTTCCTATTGGAAT
FY450450       --> GCTCTCTCAACTCCTCTTTCTCAGATATCTGTTGCACTTCCTATTGGAAT
FD971162       --> ..................................................
FD979245       --> ..................................................
FD544007       --> ..................................................
EY940365       --> ..................................................
EW734540       --> ..................................................
FD964719       --> ..................................................

               251    -    301
UN16965        --> TGATGGGTCGAGCCGATCTATGATTAAGGTGCAAAGTGTAAGCTTCACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431390       <-- ..................................................
FY434161       <-- ..................................................
FY431403       <-- ..................................................
EW728949       <-- ..................................................
FD975327       <-- ..................................................
FD539708       <-- ..................................................
EW738375       <-- ..................................................
EY936134       <-- ..................................................
EX891713       <-- ..................................................
EX908975       <-- ..................................................
EX887597       --> TGATGGGTCGAGCCGATCTATGATTAAGGTGCAAAGTGTAAGCTTCACTG
EW724282       --> TGATGGGTCGAGCCGATCTATGATTAAGGTGCAAAGTGTAAGCTTCACTG
FD562143       --> TGATGGGTCTAGCCGATCTATGATTAAGGTGCAAAGTGTAAGCTTCACTG
EY941898       --> TGATGGGTCGAGCCGATCTATGATTAAGGTGCAAAGTGTAAGCTTCACTG
FD549674       --> TGATGGGTCGAGCCGATCTATGATTAAGGCGCAAAGTGTAAGCTTCACTG
FY450450       --> TGATGGGTCTAGCCGATCTATGATTAAGGTGCAAAGTGTAAGCTTCACTG
FD971162       --> ..................................................
FD979245       --> ..................................................
FD544007       --> ..................................................
EY940365       --> ..................................................
EW734540       --> ..................................................
FD964719       --> ..................................................

               301    -    351
UN16965        --> AGAAGTCATGGGGTCCGCTTCTGAGATTAGATACGGTATCTAGGAAACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431390       <-- ..................................................
FY434161       <-- ..................................................
FY431403       <-- ..................................................
EW728949       <-- ..................................................
FD975327       <-- ..................................................
FD539708       <-- ..................................................
EW738375       <-- ..................................................
EY936134       <-- ..................................................
EX891713       <-- ..................................................
EX908975       <-- ..................................................
EX887597       --> AGAAGTCATGGGGTCCGCTTCTGAGATTAGATAAGGTACCTAGGAAACTG
EW724282       --> AGAAGTCATGGAGTCCGCTTCTGAGGTTAGATAAGGTACCTAGGAAACTG
FD562143       --> AGAAGTCATGTGGTCCGCTTCTGAGATTAGATACGGTATCTAGGAAACTG
EY941898       --> AGAAGTCATGGGGTCCGCTTCTGAGATTAGATAAGGTACCTAGGAAACTG
FD549674       --> AGAAGTCATGGGGTCCGCTTCTGAGATTAGATACGGTATCTAGGAAACTG
FY450450       --> AGAAGTCATGTGGTCCGCTTCTGAGATTAGATACGGTATCTAGGAAACTG
FD971162       --> ..................................................
FD979245       --> ..................................................
FD544007       --> ..................................................
EY940365       --> ..................................................
EW734540       --> ..................................................
FD964719       --> ..................................................

               351    -    401
UN16965        --> AGTTTGAAGAAACGGTCCACAGTATGTATGTCACTTCAGCAGCAAGCTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431390       <-- ..................................................
FY434161       <-- ..................................................
FY431403       <-- ..................................................
EW728949       <-- ..................................................
FD975327       <-- ..................................................
FD539708       <-- ..................................................
EW738375       <-- ..................................................
EY936134       <-- ..................................................
EX891713       <-- ..................................................
EX908975       <-- ..................................................
EX887597       --> AGTTTGAAGAAACGGCCCACTGTATGTATGTCACTTCAGCAGTAAGCTAG
EW724282       --> AGTTTGAAGAAACGGTCCACTGTATGTATGTCACTTCAGCAGCAAGCTAG
FD562143       --> AGTTTGAAGAAACGGTCCACAGTATGTATGTCACTTCAGCAGCAAGCTAG
EY941898       --> AGTTTGAAGAAACGGTCCACTGTATGTATGTCACTTCAGCAGCAAGCTAG
FD549674       --> AGTTTGAAGAAACGGTCCACAGTATGTATGTCACTTCAGCAGCAAGCTAG
FY450450       --> AGTTTGAAGAAACGGTCCACAGTATGTATGTCACTTCAGCAGCAAGCTAG
FD971162       --> ....gGAAGAAACGGTCCACAGTATGTATGTCACTTCAGCAGCAAGCTAG
FD979245       --> ..................................................
FD544007       --> ..................................................
EY940365       --> ..................................................
EW734540       --> ..................................................
FD964719       --> ..................................................

               401    -    451
UN16965        --> TAGATCCAAAGTCTCGGTTACTCCTCTAGAGCTTGAAGATCCCAAGGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431390       <-- ..................................................
FY434161       <-- ..................................................
FY431403       <-- ..................................................
EW728949       <-- ..................................................
FD975327       <-- ..................................................
FD539708       <-- ..................................................
EW738375       <-- ..................................................
EY936134       <-- ..................................................
EX891713       <-- ..................................................
EX908975       <-- ..................................................
EX887597       --> TAGATCCAAAGTCTCGGTTACTCCTCTAGAGCTTGAAGATCCCAAGGAGA
EW724282       --> TAGATCCAAAGTCTCGGTTACTCCTCTAGAGCTTGAAGATCCCAAGGAGA
FD562143       --> CAGATCCAAAGTCTCGGCTACTCCTCTAGAGCTTGAAGATCCCAAGGAGA
EY941898       --> TAGATCCAAAGTCTCGGTTACTCCTCTAGAGCTTGAAGATCCCAAGGAGA
FD549674       --> CAGATCCAAAGTCTCGGTTACTCCTCTAGAGCTTGAAGATCCCAAGGAGA
FY450450       --> CAGATCCAAAGTCTCGGTTACTCCTCTAGAGCTTGAAGATCCCAAGGAGA
FD971162       --> TAGATCCAAAGTCTCGGTTACTCCTCTAGAGCTTGAAGATCCCAAGGAGA
FD979245       --> ..................................................
FD544007       --> ..................................................
EY940365       --> ..................................................
EW734540       --> ..................................................
FD964719       --> ..................................................

               451    -    501
UN16965        --> CTCCGTTGAACTTGTACAGGCCTAAGGAGCCTTACACTGCAAAGATTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431390       <-- ..................................................
FY434161       <-- ..................................................
FY431403       <-- ..................................................
EW728949       <-- ..................................................
FD975327       <-- ..................................................
FD539708       <-- ..................................................
EW738375       <-- ..................................................
EY936134       <-- ..................................................
EX891713       <-- ..................................................
EX908975       <-- ..................................................
EX887597       --> CTCCGTTGAACTTGTACAGGCCTAAGGAGCCTTACACTGCAAAGATTGTC
EW724282       --> CTCCGTTGAACTTGTACAGGCCCAAGGAGCCTTACACTGCAAAGATTGTC
FD562143       --> CTCCGTTGAACTTGTACAGGCCTAAGGAGCCTTACACTGCAAAGATTGTT
EY941898       --> CTCCGTTGAACTTGTACAGGCCTAAGGAGCCTTACACTGCAAAGATTGTC
FD549674       --> CTCCGTTGAACTCGTACAGGCCTAAGGAGCCTTACACTGCAAAGATTGTT
FY450450       --> CTCCGTTGAACTTGTACAGGCCTAAGGAGCCTTACACTGCAAAGATTGTT
FD971162       --> CTCCGTTGAACTTGTACAGGCCTAAGGAGCCTTACACTGCAAAGATTGTT
FD979245       --> ..................................................
FD544007       --> ..................................................
EY940365       --> ..................................................
EW734540       --> ..................................................
FD964719       --> ..................................................

               501    -    551
UN16965        --> TCGGTTGAGAGAATCGTTGGTCCAAAAGCACCTGGAGAGACTTGCCACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431390       <-- ..................................................
FY434161       <-- ..................................................
FY431403       <-- ..................................................
EW728949       <-- ..................................................
FD975327       <-- ..................................................
FD539708       <-- ..................................................
EW738375       <-- ..................................................
EY936134       <-- ..................................................
EX891713       <-- ..................................................
EX908975       <-- ..................................................
EX887597       --> TCGGTTGAGAGAATCGTTGGCCCAAAAGCACCTGGAGAGACTTGCCACAT
EW724282       --> TCGGTTGAGAGAATCGTTGGTCCAAAAGCACCTGGAGAGACTTGCCACAT
FD562143       --> TCGGTTGAGAGAATCGTTGGTCCAAAAGCACCGGGTGAGACTTGCCACAT
EY941898       --> TCGGTTGAGAGAATCGTTGGTCCAAAAGCACCTGGAGAGACTTGCCACAT
FD549674       --> TCGGTTGAGAGAATCGTCGGTCCAAAAGCACCGGGTGAGACTTGCCACAT
FY450450       --> TCGGTTGAGAGAATCGTTGGTCCAAAAGCACCGGGTGAGACTTGCCACAT
FD971162       --> TCGGTTGAGAGAATCGTCGGTCCTAAAGCACCTGGAGAGACTTGCCACAT
FD979245       --> ..................................................
FD544007       --> ..................................................
EY940365       --> ..................................................
EW734540       --> ..................................................
FD964719       --> ..................................................

               551    -    601
UN16965        --> TGTGATTGATCATGATGGGAAGGTTCCTTACTGGGAAGGACAGAGCTATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431390       <-- ..........................CTTATTGGGAAGGACAGAGCTATG  Raphanus sativus cv GSK3-1
FY434161       <-- .....................................GGACAGAGCTATG  Raphanus sativus cv GSK3-1
FY431403       <-- ..................................................  Raphanus sativus cv GSK3-1
EW728949       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD975327       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539708       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW738375       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY936134       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX891713       <-- ..................................................  Raphanus sativus var. oleiformis
EX908975       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX887597       --> TGTGATTGATCATGATGGGAAGGTTCCTTACTGGGAAGGACAGAGCTATG  Raphanus sativus var. oleiformis
EW724282       --> TGTGATTGATCATGATGGGAAGGTTCCTTACTGGGAAGGACAGAGCTATG  Raphanus sativus cv Early Scarlet Globe
FD562143       --> TGTGATTGATCATGATGGGAAGGTTCCTTATTGGGAAGGACAGAGCTATG  Raphanus sativus var. oleiformis
EY941898       --> TGTGATTGATCATGATGGGAAGGTTCCTTACTGGGAAGGACAGAGCTATG  Raphanus sativus cv Early Scarlet Globe
FD549674       --> TGTGATTGATCATGATGGGAAGGTTCCTTACTGGGAAGGACAGAGCTATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY450450       --> TGTGATTGATCATGATGGGAAGGTTCCTTATTGGGAAGGACAGAGCTATG  Raphanus sativus cv GSK3-1
FD971162       --> TGTGATTGATCATGATGGGAAGGTTCCTTACTGGGAAGGACAGAGCTATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD979245       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD544007       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY940365       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW734540       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD964719       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               601    -    651
UN16965        --> GAGTGATTCCTCCTGGTGAGAATCCTAAGAAACCAGGTGCTCCTCACAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431390       <-- GAGTGATCCCTCCTGGTGAGAATCCTAAGAAACCAGGTGCTCCTCACAAT  Raphanus sativus cv GSK3-1
FY434161       <-- GAGTGATCCCTCCTGGTGAGAATCCTAAGAAACCAGGTGCTCCTCACAAT  Raphanus sativus cv GSK3-1
FY431403       <-- .............TGGTGAGAATCCTAAGAAACCAGGTGCTCCTCACAAT  Raphanus sativus cv GSK3-1
EW728949       <-- ...................GAATCCTAAGAAACCAGGTGCTCCTCACAAT  Raphanus sativus cv Early Scarlet Globe
FD975327       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539708       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW738375       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY936134       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX891713       <-- ..................................................  Raphanus sativus var. oleiformis
EX908975       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX887597       --> GAGTGATTCCTCCTGGTGAGA-TCCTAAGAAACCAGGTGCTCCTCACAAT  Raphanus sativus var. oleiformis
EW724282       --> GAGTGATTCCTCCTGGTGAGAATCCTAAGAAACCAGGTGCTCCTCACAAT  Raphanus sativus cv Early Scarlet Globe
FD562143       --> GAGTGATCCCTCCTGGTGAGGATCCTAAGAAACCAGGTGCTCCTCACAAT  Raphanus sativus var. oleiformis
EY941898       --> GAGTGATTTCTCCTGGTGAGAATCCTAAGAAACCAGGTGCTCCTCACAAT  Raphanus sativus cv Early Scarlet Globe
FD549674       --> GAGTGATTCCTCCTGGTGAGAATCCTAAGAAGCCAGGTGCTCCTCACAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FY450450       --> GAGTGATCCCTCCTGGTGAGAATCCTAAGAAACCAGGTGCTCCTCACAAT  Raphanus sativus cv GSK3-1
FD971162       --> GAGTAATTCCTCCTGGTGAGAATCCTAAGAAACCAGGTGCTCCTCACAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD979245       --> ....GATTCCTCCTGGTGAGAATCCTAAGAAACCAGGTGCTCCTCACAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD544007       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY940365       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW734540       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD964719       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               651    -    701
UN16965        --> GTTCGGCTTTACTCTATTGCATCAACGAGATATGGTGATTCTTTTGATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431390       <-- GTTCGGCTTTACTCTATTGCATCAACGAGATATGGTGATTCTTTTGATGG
FY434161       <-- GTTCGGCTTTACTCTATTGCATCAACGAGATATGGTGATTCTTTTGATGG
FY431403       <-- GTTCGGCTTTACTCTATTGCATCAACGAGATATGGTGATTCTTTTGATGG
EW728949       <-- GTTCGGCTTTACTCTATTGCATCAACGAGATATGGTGATTCTTTTGATGG
FD975327       <-- .......TTTACTCTATTGCGTCAACAAGATATGGTGATTCTTTTGATGG
FD539708       <-- ..........ACTCTATTGCATCAACGAGATATGGTGATTCTTTTGATGG
EW738375       <-- .........................gGAGATATGGTGAT-CTTTTGATG-
EY936134       <-- ..................................................
EX891713       <-- ..................................................
EX908975       <-- ..................................................
EX887597       --> GTTCGGCTTTACTCTATTGCATCA-CGAGATATGGTGATTCTTTTGATGG
EW724282       --> GTTCGGCTTTACTCTATTGCATCAACGAGATATGGTGATTCTTTTGATGG
FD562143       --> GTTCGGCTTTACTCTATTGCATCAACGAGATATGGTGATTCTTTTGATGG
EY941898       --> GTTCGGCTTTACTCTATTGCATCAACGAGATATGGTGATTCTTTTGATGG
FD549674       --> GTTCGGCTTTACTCTATTGCATCAACGAGATATGGTGATTCTTTTGATGG
FY450450       --> GTTCGGCTTTACTCTATTGCATCAACGAGATATGGTGATTCTTTTGATGG
FD971162       --> GTTCGCCTTTACTCTATTGCATCAACGAGATATGGTGATTCTTTTGATGG
FD979245       --> GTTCGGCTTTACTCTATTGCGTCAACAAGATATGGTGATTCTTTTGATGG
FD544007       --> ..gcgcCTTTACTCTATTGCATCAACGAGATATGGTGATTCTTTTGATGG
EY940365       --> .........gACTCTATTGCATCAACGAGATATGGTGATTCTTTTGATGG
EW734540       --> .........................gGAGATATGGTGATTCTTTTGATGG
FD964719       --> ..................................................

               701    -    751
UN16965        --> CAAGACGGCTAGCTTATGTGTTCGCCGAGCTCAGTACTATGATCCAGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431390       <-- CAAGACGGCTAGCTTATGTGTTCGCCGAGCTCAGTACTATGATCCAGAGA
FY434161       <-- CAAGACGGCTAGCTTATGTGTTCGCCGAGCTCAGTACTATGATCCAGAGA
FY431403       <-- CAAGACGGCTAGCTTATGTGTTCGCCGAGCTCAGTACTATGATCCAGAGA
EW728949       <-- CAAGACGGCTAGCTTATGTGTTCGCCGAGCTCAGTACTATGATCCAGAGA
FD975327       <-- CAAGACGGCTAGCTTATGCGTTCGCCGAGCTCAGTACTATGATCCAGAGA
FD539708       <-- CAAGACGGCTAGCTTATGTGTTCGCCGAGCTCAGTACTATGATCCAGAGA
EW738375       <-- CAAGACGGCTAGCTTATGTGTTCGCCGAGCTCAGTACTATGATCCAGAGA
EY936134       <-- ..................................................
EX891713       <-- ..................................................
EX908975       <-- ..................................................
EX887597       --> CA-GAC-GCTAGCTTATGTGTTCGCCGAGCTCAGTACTATGAT.......
EW724282       --> CAAGACGGCTAGCTTATGTGTTCGCCGAGCTCAGTACTATGATCCAGAGA
FD562143       --> CAAGACGGCTAGCTTATGTGTTCGCCGAGCTCAGTACTATGATCCAGAGA
EY941898       --> CAAGACGGCTAGCTTATGTGTTCGCCGAGCTCAGTACTATGATCCAGAGA
FD549674       --> CAAGACGGCTAGCTTATGCGTTCGCCGAGCTCAGTACTATGATCCAGAGA
FY450450       --> CAAGACGGCTAGCTTATGTGTTCGCCGAGCTCAGTACTATGATCCAGAGA
FD971162       --> CAAGACGGCTAGCTTATGTGTTCGCCGAGCTCAGTACTATGATCCAGAGA
FD979245       --> CAAGACGGCTAGCTTATGCGTTCGCCGAGCTCAGTACTATGATCCAGAGA
FD544007       --> CAAGACGGCTAGCTTATGTGTTCGCCGAGCTCAGTACTATGATCCAGAGA
EY940365       --> CAAGACGGCTAGCTTATGTGTTCGCCGAGCTCAGTACTATGATCCAGAGA
EW734540       --> CAAGACGGCTAGCTTATGTGTTCGCCGAGCTCAGTACTATGATCCAGAGA
FD964719       --> ..................................................

               751    -    801
UN16965        --> CAGGAAAGGAAGATCCTTCCAAAGCTGGTGTGTGTAGTAACTTCTTGTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431390       <-- CAGGAAAGGAAGATCCTTCCAAAGCTGGTGTGTGTAGTAACTTCTTGTGC
FY434161       <-- CAGGAAAGGAAGATCCTTCCAAAGCTGGTGTGTGTAGTAACTTCTTGTGC
FY431403       <-- CAGGAAAGGAAGATCCTTCCAAAGCTGGTGTGTGTAGTAACTTCTTGTGC
EW728949       <-- CAGGAAAGGAAGATCCTTCCAAAGCTGGTGTGTGTAGTAACTTCTTGTGC
FD975327       <-- CAGGAAAGGAAGATCCTTCAAAAGCTGGTGTGTGTAGTAACTTCTTGTGC
FD539708       <-- CAGGAAAGGAAGATCCTTCCAAAGCTGGTGTGTGTAGTAACTTCTTGTGC
EW738375       <-- CAGGAAAGGAAGATCCTTCCAAAGCTGGTGTGTGTAGTAACTTCTTGTGC
EY936134       <-- ..................................................
EX891713       <-- ..................................................
EX908975       <-- ..................................................
EX887597       --> ..................................................
EW724282       --> CAGGAAAGGA-GATCCTTCCAAAGCTGGTGTGTGTAGTAACTTCTTGTGC
FD562143       --> CAGGAAAGGAAGATCCTTCCAAAGCTGGTGTGTGTAGTAACTTCTTGTGC
EY941898       --> CAGGAAAGGAAGATCCTTCCAAAGCTGGTGTGTGTAGTAACTTCTTGTGC
FD549674       --> CAGGAAAGGAAGATCCTTCCAAAGCTGGTGTGTGTAGTAACTTCTTGTGC
FY450450       --> CAGGAAAGGAAGATCCTTCCAAAGCTGGTGTGTGTAGTAACTTCTTGTGC
FD971162       --> CAGGAAAGGAAGATCCTTCCAAAGCTGGTGTGTGTAGTAACTTCTTGTGC
FD979245       --> CAGGAAAGGAAGATCCTTCAAAAGCTGGTGTGTGTAGTAACTTCTTGTGC
FD544007       --> CAGGAAAGGAAGATCCTTCCAAAGCTGGTGTGTGTAGTAACTTCTTGTGC
EY940365       --> CAGGAAAGGAAGATCCTTCCAAAGCTGGTGTGTGTAGTAACTTCTTGTGC
EW734540       --> CAGGAAAGGAAGATCCTTCCAAAGCTGGTGTGTGTAGTAACTTCTTGTGC
FD964719       --> ..................................................

               801    -    851
UN16965        --> AATGCTAAACCTGGAGATAAGGTCCAAATCACCGGTCCGTCTGGAAA-GG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431390       <-- AATGCTAAACCTGGAGATAAGGTCCAAATCACAGGTCCGTCTGGAAA-GG  Raphanus sativus cv GSK3-1
FY434161       <-- AATGCTAAACCTGGAGATAAGGTCCAAATCACAGGTCCGTCTGGAAA-GG  Raphanus sativus cv GSK3-1
FY431403       <-- AATGCTAAACCTGGAGATAAGGTCCAAATCACAGGTCCGTCTGGAAA-GG  Raphanus sativus cv GSK3-1
EW728949       <-- AATGCTAAACCTGGAGATAAGGTCCAAATCACCGGTCCGTCTGGAAA-GG  Raphanus sativus cv Early Scarlet Globe
FD975327       <-- AATGCTAAACCTGGAGATAAGGTCCAAATCACAGGTCCATCTGGAAA-GG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539708       <-- AATGCTAAACCTGGAGATAAGGTCCAAATCACCGGTCCGTCTGGAAA-GG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW738375       <-- AATGCTAAACCTGGAGATAAGGTCCAAATCACCGGTCCATCTGGAAA-GG  Raphanus sativus cv Rat-Tail Radish #3870
EY936134       <-- ........................................CTGGAAAAGG  Raphanus sativus cv Early Scarlet Globe
EX891713       <-- ..................................................  Raphanus sativus var. oleiformis
EX908975       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX887597       --> ..................................................  Raphanus sativus var. oleiformis
EW724282       --> A-TGCTAAACCTGGAGATA--GTCCAAATCACCGGTCCGTCTGGAAA-GG  Raphanus sativus cv Early Scarlet Globe
FD562143       --> AATGCTAAACC.......................................  Raphanus sativus var. oleiformis
EY941898       --> AATGCTAAACCTGGAGATAAG-TCCAAATCACCGG-CCGTCT........  Raphanus sativus cv Early Scarlet Globe
FD549674       --> AATGCTAAACC.......................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY450450       --> AATGCTAAACCTGGAGATAAGGTCCAAATCACAGGTCCGTCTGGAAA-GG  Raphanus sativus cv GSK3-1
FD971162       --> AATGCTAAACCTGGAGATAAGGTCCAAATCACCGGTCCATCTGGAAA-GG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD979245       --> AATGCTAAACCTGGAGATAAGGTCCAAATCACAGGTCCATCTGGAAA-GG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD544007       --> AATGCTAAACCTGGAGATAAGGTCCAAATCACCGGTCCGTCTGGAAA-GG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY940365       --> AATGCTAAACCTGGAGATAAGGTCCAAATCACCGGTCCGTCTGGAAA-GG  Raphanus sativus cv Early Scarlet Globe
EW734540       --> AATGCTAAACCTGGAGATAAGGTCCAAATCACCGGTCCATCTGGAAA-GG  Raphanus sativus cv Rat-Tail Radish #3870
FD964719       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               851    -    901
UN16965        --> TAATGCTTTTACCTGAAGATGATCCGAAAGCTACACACATAATGATTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431390       <-- TAATGCTTTTACCTGAAGATGATCCGAAAGCTACACACATAATGATTGCC  Raphanus sativus cv GSK3-1
FY434161       <-- TAATGCTTTTACCTGAAGATGATCCGAAAGCTACACACATAATGATTGCT  Raphanus sativus cv GSK3-1
FY431403       <-- TAATGCTTTTACCTGAAGATGATCCGAAAGCTACACACATAATGATTGCC  Raphanus sativus cv GSK3-1
EW728949       <-- TAATGCTTTTACCTGAAGAAGATCCGAAAGCTACACACATAATGATTGCT  Raphanus sativus cv Early Scarlet Globe
FD975327       <-- TAATGCTTTTACCTGAAGATGATCCAAAAGCTACTCATATAATGATTGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539708       <-- TAATGCTTTTCCCTGAAGATGATCCGAAAGCTACACACATAATGATTGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW738375       <-- TAATGCTTTTACCTGAAGATGATCCGAAAGCTACTCACATAATGATTGCT  Raphanus sativus cv Rat-Tail Radish #3870
EY936134       <-- TAATGCTTTTACCTGAAGAAGATCCGAAAGCTACACACATAATGATTGCT  Raphanus sativus cv Early Scarlet Globe
EX891713       <-- ..................................................  Raphanus sativus var. oleiformis
EX908975       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX887597       --> ..................................................  Raphanus sativus var. oleiformis
EW724282       --> TA-TGCTTTa........................................  Raphanus sativus cv Early Scarlet Globe
FD562143       --> ..................................................  Raphanus sativus var. oleiformis
EY941898       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD549674       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY450450       --> TAATGCTTTTACCTGAAGATGATCC.........................  Raphanus sativus cv GSK3-1
FD971162       --> TAATGCTTTTACCTGAAGATGATCCAAAAGCTACACACATAATGATTGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD979245       --> TAATGCTTTTACCTGAAGATGATCCAAAAGCTACTCATATAATGATTGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD544007       --> TAATGCTTTTCCCTGAAGATGATCCGAAAGCTACACACATAATGATTGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY940365       --> TAATGCTTTTACCTGAAGAAGATCCGAAAGCTACACACATAATGATTGCT  Raphanus sativus cv Early Scarlet Globe
EW734540       --> TAATGCTTTTACCTGAAGATGATCCGAAAGCTACTCACATAATGATTGCT  Raphanus sativus cv Rat-Tail Radish #3870
FD964719       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               901    -    951
UN16965        --> ACTGGAACCGGAGTAGCTCCATTCAGAGGGTACTTGCGCCGTATGTTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431390       <-- ACTGGAACCGGTGTGGCCCCATTCAGAGGGTACTTGCGCCGCATGTTCAT
FY434161       <-- ACTGGAACCGGTGTGGCCCCATTCAGAGGGTACTTGCGCCGCATGTTCAT
FY431403       <-- ACTGGAACCGGTGTGGCCCCATTCAGAGGGTACTTGCGCCGCATGTTCAT
EW728949       <-- ACTGGAACCGGAGTAGCTCCATTCAGAGGGTACTTGCGCCGTATGTTCAT
FD975327       <-- ACTGGAACCGGAGTAGCTCCATTCAGAGGGTACTTGCGCCGTATGTTCAT
FD539708       <-- ACCGGAACCGGAGTAGCTCCATTCAGAGGGTACTTGCGTCGTATGTTTAT
EW738375       <-- ACTGGAACCGGAGTAGCTCCATTCAGAGGGTACTTGCTTCGTATGTTTAT
EY936134       <-- ACTGGAACCGGAGTAGCTCCATTCAGAGGGTACTTGCGCCGTATGTTCAT
EX891713       <-- ..................................................
EX908975       <-- ..................................................
EX887597       --> ..................................................
EW724282       --> ..................................................
FD562143       --> ..................................................
EY941898       --> ..................................................
FD549674       --> ..................................................
FY450450       --> ..................................................
FD971162       --> ACTGGAACCGGAGTAGCTCCATTCAGAGGGTACTTGCGCCGTATGTTCAT
FD979245       --> ACTGGAACCGGAGTAGCTCCATTCAGAGGGTACTTGCGCCGTATGTTCAT
FD544007       --> ACCGGAACCGGAGTAGCTCCATTCAGAGGGTACTTGCGTCGTATGTTTAT
EY940365       --> ACTGGAACCGGAGTAGCTCCATTCAGAGGGTACTTGCGCCGTATGTTCAT
EW734540       --> ACTGGAACCGGAGTAGCTCCATTCAGAGGGTACTTGCTTCGTATGTTTAT
FD964719       --> ..................................................

               951    -   1001
UN16965        --> GGAGAATGTTCCCACGTTCAAGTTTGATGGACTCGCGTGGCTCTTCCTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431390       <-- GGAGAATGTTCCTACGTTCAAGTTTGATGGACTCGCGTGGCTATTCCTCG  Raphanus sativus cv GSK3-1
FY434161       <-- GGAGAATGTTCCTACGTTCAAGTTTGATGGACTCGCGTGGCTATTCCTCG  Raphanus sativus cv GSK3-1
FY431403       <-- GGAGAATGTTCCTACGTTCAAGTTTGATGGACTCGCGTGGCTATTCCTCG  Raphanus sativus cv GSK3-1
EW728949       <-- GGAGAACGTTCCCACGTTCAAGTTTGATGGACTCGCGTGGCTCTTCCTCG  Raphanus sativus cv Early Scarlet Globe
FD975327       <-- GGAGAACGTTCCCACGTTCAAGTTTGATGGACTCGCGTGGCTCTTCCTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539708       <-- GGAGAATGTTCCCACGTTCAAGTTTGATGGACTCGCGTGGCTCTTCCTCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW738375       <-- GGAGAATGTTCCCACGTTCAAGTTTGATGGACTCGCGTGGCTCTTCCTCG  Raphanus sativus cv Rat-Tail Radish #3870
EY936134       <-- GGAGAACGTTCCCACGTTCAAGTTTGATGGACTCGCGTGGCTCTTCCTCG  Raphanus sativus cv Early Scarlet Globe
EX891713       <-- ..................................................  Raphanus sativus var. oleiformis
EX908975       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX887597       --> ..................................................  Raphanus sativus var. oleiformis
EW724282       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD562143       --> ..................................................  Raphanus sativus var. oleiformis
EY941898       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD549674       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY450450       --> ..................................................  Raphanus sativus cv GSK3-1
FD971162       --> G.................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD979245       --> GGAGAACGTTCCCACGTTCAAGTTTGATGGACTCGCGTGGCTCTTCCTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD544007       --> GGAGAATGTTCCCACGTTCAAGTTTGATGGACTCGCGTGGCTCTTCCTCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY940365       --> GGAGAACGTTCCCACGTTCAAGTTTGATGGACTCGCGTGGCTCTTCCTCG  Raphanus sativus cv Early Scarlet Globe
EW734540       --> GGAGAATGTTCCCACGTTCAAGTTTGATGGACTCGCGTGGCTCTTCCTCG  Raphanus sativus cv Rat-Tail Radish #3870
FD964719       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               1001   -   1051
UN16965        --> GTGTGGCTAACTCAGACAGTCTTCTCTACGACGAAGAGTTCTCAAGCTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431390       <-- GTGTGGCTAACTCAGACAGTCTTCTGTACGACGAAGAGTTCTCAAGCTAC  Raphanus sativus cv GSK3-1
FY434161       <-- GTGTGGCTAACTCAGACAGTCTTCTGTACGACGAAGAGTTCTCAAGCTAC  Raphanus sativus cv GSK3-1
FY431403       <-- GTGTGGCTAACTCAGACAGTCTTCTGTACGACGAAGAGTTCTCAAGCTAC  Raphanus sativus cv GSK3-1
EW728949       <-- GTGTGGCTAACTCAGACAGTCTTCTTTACGACGAAGAGTTCTCAAGCTAC  Raphanus sativus cv Early Scarlet Globe
FD975327       <-- GTGTGGCTAACTCAGACAGTCTTCTCTACGACGAAGAGTTCTCAAGCTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539708       <-- GTGTGGCTAACACAGACAGTCTTCTTTACGACGAAGAGTTCTCAAGCTAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW738375       <-- GCGTGGCTAACTCAGACAGTTTTCTTTACGACGAAGAGTTCTCAAGCTAT  Raphanus sativus cv Rat-Tail Radish #3870
EY936134       <-- GTGTGGCCAACTCAGACAGTCTTCTCTACGACGAAGAGTTCTCAAGCTAC  Raphanus sativus cv Early Scarlet Globe
EX891713       <-- .....................TTCTTTACGACGAAGAGTTCTCAAGCTAC  Raphanus sativus var. oleiformis
EX908975       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX887597       --> ..................................................  Raphanus sativus var. oleiformis
EW724282       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD562143       --> ..................................................  Raphanus sativus var. oleiformis
EY941898       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD549674       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY450450       --> ..................................................  Raphanus sativus cv GSK3-1
FD971162       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD979245       --> GTGTGGCTAACTCAGACAGTCTTCTCTACGACGAAGAGTTCTCAAGCTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD544007       --> GTGTGGCTAACACAGACAGTCTTCTCTACGACGAAGAGTTCTCAAGCTAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY940365       --> GTGTGGCCAACTCAGACAGTCTTCTCTACGACGAAGAGTTCTCAAGCTAC  Raphanus sativus cv Early Scarlet Globe
EW734540       --> GCGTGGCTAACTCAGACAGTCTTCTCTACGACGAAGAGTTCTCAAGCTAT  Raphanus sativus cv Rat-Tail Radish #3870
FD964719       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               1051   -   1101
UN16965        --> CTCAAGGACTATCCAGAGAACTTCAGGTATGATAAAGCGTTGAGCAGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431390       <-- CTCAAGGACTATCCAGAGAATTTCAGGTACGACAAAGCGCTGAGCAGAGA  Raphanus sativus cv GSK3-1
FY434161       <-- CTCAAGGACTATCCAGAGAATTTCAGGTACGACAAAGCGCTGAGCAGAGA  Raphanus sativus cv GSK3-1
FY431403       <-- CTCAAGGACTATCCAGAGAATTTCAGGTACGACAAAGCGCTGAGCAGAGA  Raphanus sativus cv GSK3-1
EW728949       <-- CTCAAGGACTATCCAGAGAACTTCAGGTATGATAAAGCGTTGAGCAGAGA  Raphanus sativus cv Early Scarlet Globe
FD975327       <-- CTCAAGGACTATCCAGAGAACTTCAGGTATGATAAAGCGTTGAGCAGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539708       <-- CTCAAGGACTATCCAGAGAACTTCAGGTATGATAAAGCGTTGAGCAGGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW738375       <-- CTCAAGGACTATCCAGAGAATTTCAGGTATGATAAAGCGCTGAGCAGAGA  Raphanus sativus cv Rat-Tail Radish #3870
EY936134       <-- CTCAAGGACTATCCAGAGAACTTCAGGTATGATAAAGCGTTGAGCAGAGA  Raphanus sativus cv Early Scarlet Globe
EX891713       <-- CTCAAGGACTATCCAGAGAACTTCAGGTATGATAAAGCGTTGAGCAGAGA  Raphanus sativus var. oleiformis
EX908975       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX887597       --> ..................................................  Raphanus sativus var. oleiformis
EW724282       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD562143       --> ..................................................  Raphanus sativus var. oleiformis
EY941898       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD549674       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY450450       --> ..................................................  Raphanus sativus cv GSK3-1
FD971162       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD979245       --> CTCAAGGACTATCCAGAGAACTTCAGGTATGATAAAGCGTTGAGCAGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD544007       --> CTCAAGGACTATCCAGAGAACTTCAGGTATGATAAAGCGTTGAGCAGGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY940365       --> CTCAAGGACTATCCAGAGAACTTCAGGTATGATAAAGCGTTGAGCAGAGA  Raphanus sativus cv Early Scarlet Globe
EW734540       --> CTCAAGGACTATCCAGAGAATTTCAGGTATGATAAAGCGCTGAGCAGAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD964719       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               1101   -   1151
UN16965        --> AGAGAAGAACAAGAAAGGAGGGAAGATGTATGTGCAGGACAAGATTGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431390       <-- AGAGAAGAACAAGAAAGGAGGGAAGATGTATGTGCAGGACAAAATTGAAG  Raphanus sativus cv GSK3-1
FY434161       <-- AGAGAAGAACAAGAAAGGAGGGAAGATGTATGTGCAGGACAAAATTGAAG  Raphanus sativus cv GSK3-1
FY431403       <-- AGAGAAGAACAAGAAAGGAGGGAAGATGTATGTGCAGGACAAAATTGAAG  Raphanus sativus cv GSK3-1
EW728949       <-- AGAGAAGAACAGGAAAGGTGGGAAGATGTATGTGCAGGACAAGATTGAAG  Raphanus sativus cv Early Scarlet Globe
FD975327       <-- AGAGAAGAACAAGAAAGGTGGGAAGATGTATGTGCAGGACAAGATTGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539708       <-- AGAGAAGAACAAGAAAGGAGGGAAGATGTATGTGCAGGACAAGATTGAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW738375       <-- AGAGAAGAACAAGAAAGGAGGGAAGATGTATGTGCAGGACAAGATTGAAG  Raphanus sativus cv Rat-Tail Radish #3870
EY936134       <-- AGAGAAGAACAAGAAAGGTGGGAAGATGTACGTGCAGGACAAGATTGAAG  Raphanus sativus cv Early Scarlet Globe
EX891713       <-- AGAGAAGAACAAGAAAGGTGGGTAGATGTATGTGCAGGACAAGATTGAAG  Raphanus sativus var. oleiformis
EX908975       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX887597       --> ..................................................  Raphanus sativus var. oleiformis
EW724282       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD562143       --> ..................................................  Raphanus sativus var. oleiformis
EY941898       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD549674       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY450450       --> ..................................................  Raphanus sativus cv GSK3-1
FD971162       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD979245       --> AGAGAAGAACAAGAAAGGTGGGAAGATGTATGTGCAGGACAAGATTGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD544007       --> AGAGAAGAACAAGAAAGGAGGGAAGATGTATGTGCAGGACAAGATTGAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY940365       --> AGAGAAGAACAAGAAAGGTGGGAAGATGTACGTGCAGGACAAGATTGAAG  Raphanus sativus cv Early Scarlet Globe
EW734540       --> AGAGAAGAACAAGAAAGGAGGGAAGATGTATGTGCAGGACAAGATTGAAG  Raphanus sativus cv Rat-Tail Radish #3870
FD964719       --> ...................................gGGACAAGATTGAAG  Raphanus raphanistrum subsp. maritimus

               1151   -   1201
UN16965        --> AGTACAGCGATGAGATCTTTAAGCTTTTGGATGATGGAGCTCATATTTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431390       <-- AGTACAGCGATGAGATCTTTAAGCTTTTGGATAATGGAGCTCATATTTAC  Raphanus sativus cv GSK3-1
FY434161       <-- AGTACAGCGATGAGATCTTTAAGCTTTTGGATAATGGAGCTCATATTTAC  Raphanus sativus cv GSK3-1
FY431403       <-- AGTACAGCGATGAGATCTTTAAGCTTTTGGATAATGGAGCTCATATTTAC  Raphanus sativus cv GSK3-1
EW728949       <-- AGTACAGCGATGAGATCTTTAAGCTTTTGGATGATGGAGCTCATATTTAC  Raphanus sativus cv Early Scarlet Globe
FD975327       <-- AGTACAGCGATGAGATCTTTAAGCTTTTGGATGATGGAGCTCATATTTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539708       <-- AGTACAGCGATGAGATCTTTAAGCTTTCGGATGATGGAGCTCATATTTAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW738375       <-- AGTACAGCGATGAGATCTTTAAGCTTTTGGATAATGGAGCTCATATTTAC  Raphanus sativus cv Rat-Tail Radish #3870
EY936134       <-- AGTACAGCGATGAGATCTTTAAGCTTTTGGATGATGGAGCTCATATTTAC  Raphanus sativus cv Early Scarlet Globe
EX891713       <-- AGTACAGCGATGAGATCTTTAAGCTTTTGGATGATGGAGCTCATATTTAC  Raphanus sativus var. oleiformis
EX908975       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX887597       --> ..................................................  Raphanus sativus var. oleiformis
EW724282       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD562143       --> ..................................................  Raphanus sativus var. oleiformis
EY941898       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD549674       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY450450       --> ..................................................  Raphanus sativus cv GSK3-1
FD971162       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD979245       --> AGTACAGCGATGAGATCTTTAAGCTTTTGGATGATGGAGCTCATATTTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD544007       --> AGTACAGCGATGAGATCTTTAAGCTTTCGGATGATGGAGCTCATATTTAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY940365       --> AGTACAGCGATGAGATCTTTAAGCTTTTGGATGATGGAGCTCATATTTAC  Raphanus sativus cv Early Scarlet Globe
EW734540       --> AGTACAGCGATGAGATCTTTAAGCTTTTGGATAATGGAGCTCATATTTAC  Raphanus sativus cv Rat-Tail Radish #3870
FD964719       --> AGTACAGCGATGAGATCTTTAAGCTTTTGGATGATGGAGCTCATATTTAC  Raphanus raphanistrum subsp. maritimus

               1201   -   1251
UN16965        --> TTTTGTGGGCTTAAAGGAATGATGCCAGGGATCCAAGATACGCTTAAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431390       <-- TTTTGTGGGCTTAAAGGAATGATGCCTGGAATTCAAGATACGCTTAAGAG  Raphanus sativus cv GSK3-1
FY434161       <-- TTTTGTGGGCTTAAAGGAATGATGCCTGGAATTCAAGATACGCTTAAGAG  Raphanus sativus cv GSK3-1
FY431403       <-- TTTTGTGGGCTTAAAGGAATGATGCCTGGAATTCAAGATACGCTTAAGAG  Raphanus sativus cv GSK3-1
EW728949       <-- TTTTGTGGGCTTAAAGGAATGATGCCAGGGATCCAAGATACGCTTAAGAG  Raphanus sativus cv Early Scarlet Globe
FD975327       <-- TTTTGTGGGCTTAAAGGAATGATGCCAGGGATCCAAGATACGCTTAAGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539708       <-- TTTTGTGGGCTTAAAGGAATGATGCCAGGGATTCAAGATACGCTTAAGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW738375       <-- TTTTGTGGGCTTAAAGGAATGATGCCAGGGATTCAAGATACGCTTAAGAG  Raphanus sativus cv Rat-Tail Radish #3870
EY936134       <-- TTTTGTGGGCTTAAAGGAATGATGCCAGGGATCCAAGATACGCTTAAGAG  Raphanus sativus cv Early Scarlet Globe
EX891713       <-- TTTTGTGGGCTTAAAGGAATGATGCCAGGGATCCAAGACACGCTTAAGAG  Raphanus sativus var. oleiformis
EX908975       <-- ...............GGAATGATGCCAGGGATCCAAGATACGCTTAAGAG  Raphanus sativus cv Rat-Tail Radish #3870
EX887597       --> ..................................................  Raphanus sativus var. oleiformis
EW724282       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD562143       --> ..................................................  Raphanus sativus var. oleiformis
EY941898       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD549674       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY450450       --> ..................................................  Raphanus sativus cv GSK3-1
FD971162       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD979245       --> TTTTGTGGGCTTAAAGGAATGATGCCAGGGATCCAAGATACGCTTAAGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD544007       --> TTTTGTGGGCTTAAAGGAATGATGCCAGGGATTCAAGATACGCTTAAGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY940365       --> TTTTGTGGGCTTAAAGGAATGATGCCAGGGATCCAAGATACGCTTAAGAG  Raphanus sativus cv Early Scarlet Globe
EW734540       --> TTTTGTGGGCTTAAAGGAATGATGCCAGGGATTCAAGATACGCTTAAGAG  Raphanus sativus cv Rat-Tail Radish #3870
FD964719       --> TTTTGTGGGCTTAAAGGAATGATGCCAGG-ATCCAAGATACGCTTAAGAG  Raphanus raphanistrum subsp. maritimus

               1251   -   1301
UN16965        --> AGTTGCGGAGGAGAGAGGTGAAAGCTGGGAGCAGAAGCTTACTCAGCTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431390       <-- AGTTGCGGAGGAGAGAGGTGAAAGCTGGGAACAGAAGCTTTCTCAGCTTA
FY434161       <-- AGTTGCGGAGGAGAGAGGTGAAAGCTGGGAACAGAAGCTTTCTCAGCTTA
FY431403       <-- AGTTGCGGAGGAGAGAGGTGAAAGCTGGGAACAGAAGCTTTCTCAGCTTA
EW728949       <-- AGTTGCGGAGGAGAGAGGTGAAAGCTGGGAGCAGAAGCTTACTCAGCTTA
FD975327       <-- AGTTGCGGAGGAGAGAGGTGAAAGCTGGGAGCGGAAGCTTACTCAGCTTA
FD539708       <-- AGTTGCGGAGGAGAGAGGTGAAAGCTGGGAGCAGAAGCTTACTCAGCTTA
EW738375       <-- AGTTGCGGAGGAGAGAGGTGAAAGCTGGGAGCAGAAGCTTACTCAGCTTA
EY936134       <-- AGTTGCGGAGGAGAGAGGTGAAAGCTGGGAGCAGAAGCTTACTCAGCTTA
EX891713       <-- AGTTGCGGAGGAGAGAGGTGAAAGCTGGGAGCAGAAGCTTACTCAGCTTA
EX908975       <-- AGTTGCGGAGGAGAGAGGTGAAAGCTGGGAGCAGAAGCTTACTCAGCTTA
EX887597       --> ..................................................
EW724282       --> ..................................................
FD562143       --> ..................................................
EY941898       --> ..................................................
FD549674       --> ..................................................
FY450450       --> ..................................................
FD971162       --> ..................................................
FD979245       --> AGTTGCGGAGGAGAGAGGTGAAAGCTGGGAGCGGAAGCTTACTCAGCTTA
FD544007       --> AGTTGCGGAGGAGAGAGGTGAAAGCTGGGAGCAGAAGCTTACTCAGCTTA
EY940365       --> AGTTGCGGAGGAG.....................................
EW734540       --> AGTTGCGGAGGAGAGAGGTGAAAGCTGGGAGCAGAAGCTTACTCAGCT..
FD964719       --> AGTTGCGGAGGAGAGAGGTGAAAGCTGGGAGCAGAAGCTTACTCAGCTTA

               1301   -   1351
UN16965        --> GGAAGAACAAGCAATGGCATGTTGAAGTGTATTGAGCT-GTGTAATAGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431390       <-- GGAAGAACAAGCAATGGCATGTTGAAGTGTATTGATCT-GTGTAATAGTC
FY434161       <-- GGAAGAACAAGCAATGGCATGTTGAAGTGTATTGATCT-GTGTAATAGTC
FY431403       <-- GGAAGAACAAGCAATGGCATGTTGAAGTGTATTGATCT-GTGTAATAGTC
EW728949       <-- GGAAGAACAAGCAATGGCATGTTGAAGTGTATTGAGCT-GTGTAATAGTC
FD975327       <-- GGAAGAACAAGCAATGGCATGTTGAAGTGTATTGAGCT-GTGTAATAGTC
FD539708       <-- GGAAGAACAAGCAATGGCATGTTGAAGTGTATTGAGCT-GTGTAATAGTC
EW738375       <-- GGAAGAACAAGCAATGGCATGTTGAAGTGTATTGAGCTTGTGTAATAGTC
EY936134       <-- GGAAGAACAAGCAATGGCATGTTGAAGTTTATTGAGCT-GTGTAATAGTC
EX891713       <-- GGAAGAACAAGCAATGGCATGTTGAAGTGTATTGAGCT-GTGTAATAGTC
EX908975       <-- GGAAGAACAAGCAATGGCATGTTGAAGTGTATTGAGCT-GTGTAATAGTC
EX887597       --> ..................................................
EW724282       --> ..................................................
FD562143       --> ..................................................
EY941898       --> ..................................................
FD549674       --> ..................................................
FY450450       --> ..................................................
FD971162       --> ..................................................
FD979245       --> Ga................................................
FD544007       --> G-AAGAACAAGCAATGGCATGTTGAAGTGTATTGAGCT-GTGTAATAGTC
EY940365       --> ..................................................
EW734540       --> ..................................................
FD964719       --> GGAAGAACAAGCAATGGCATGTTGAAGTGTATTGAGCT-GTGTAATAGTC

               1351   -   1401
UN16965        --> TCTCTCTCTGTGTTTTTCTTTACATTTCTGCAATTGAATAAATGTTTGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431390       <-- TCTCTCTGTGTGTTTTTCTTTACATTTCTGCAATTGAATAAATGTTTGTG  Raphanus sativus cv GSK3-1
FY434161       <-- TCTCTCTGTGTGTTTTTCTTTACATTTCTGCAATTGAATAAATGTTTGTG  Raphanus sativus cv GSK3-1
FY431403       <-- TCTCTCTGTGTGTTTTTCTTTACATTTCTGCAATTGAATAAATGTTTGTG  Raphanus sativus cv GSK3-1
EW728949       <-- TCTCTCTCTGTGTTTTTCTTTACATTTCTGCAATTGAATAAATGTTTGTG  Raphanus sativus cv Early Scarlet Globe
FD975327       <-- TCTCTCTCTGTGTTTTTCTTTACATTTCTGCAATTGAATAAATGTTTGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539708       <-- TCTCTCTCTGTGTTTTTCTTTACATTTCTGCAATTGAATAAATGTTTGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW738375       <-- TCTC--TGTGTGTTTTTCTTTACATTTCTGCAATTGAATAAATGTTTGTG  Raphanus sativus cv Rat-Tail Radish #3870
EY936134       <-- TCTCTCTCTGTGTTTTTCTTTACACTTCTGCAATTGAATAAATGTTTGTG  Raphanus sativus cv Early Scarlet Globe
EX891713       <-- TCTCTCTCTGTGTTTTTCTTTACATTTCTGCAATTGAATAAGTGTTTGTG  Raphanus sativus var. oleiformis
EX908975       <-- TCTCTCTCTGTGTTTTTCTTTACATTTCTGCAATTGAATAAATGTTTGTG  Raphanus sativus cv Rat-Tail Radish #3870
EX887597       --> ..................................................  Raphanus sativus var. oleiformis
EW724282       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD562143       --> ..................................................  Raphanus sativus var. oleiformis
EY941898       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD549674       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY450450       --> ..................................................  Raphanus sativus cv GSK3-1
FD971162       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD979245       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD544007       --> TCTCTCTCTGTGTTTT-CTTTACATTTCTGCAATTGAATAAATGTTTGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY940365       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW734540       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD964719       --> TCTCTCTCTGTGTTTTTCTTTACATTTCTGCAATTGAATAAATGTTTGTG  Raphanus raphanistrum subsp. maritimus

               1401   -   1451
UN16965        --> ATGATCCATTTTGTATGGATGATAAGACTCTT-AAGATATAGCTCAGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431390       <-- ATGATCCATTTTGTATGGATGATAAGACT.....................
FY434161       <-- ATGATCCATTTTGTATGGATGATAAGACTCTTTAAGAT............
FY431403       <-- ATGATCCATTTTGTATGGATGATAAGACTCTT-AAG..............
EW728949       <-- ATGATCCATTTTGTATGGATGATAAGACTCTT-AAGATATAGCTCAGCTT
FD975327       <-- ATGATCCATTTTGTATGGATGATAAGACTCTT-AAGATATAGCTCAGCTT
FD539708       <-- ATGATCCATTTTGTATGGATGATAAGACTCTT-AAGATATAGCTCAGCTT
EW738375       <-- ATGATCCATTTTGTATGGATGATAAGACTCTTTAAGATATAGCTCAGCTT
EY936134       <-- ATGATCCATTTTGTATGGATGATAAGACTCTT-AAGATATAGCTCAGCTT
EX891713       <-- ATGATCCATTTTGTATGGATGATAAGACTCTT-AAGATATAGCTCAGCTT
EX908975       <-- ATGATCCATTTTGTATGGATGATAAGACTCTT-AAGATATAGCTCAGCTT
EX887597       --> ..................................................
EW724282       --> ..................................................
FD562143       --> ..................................................
EY941898       --> ..................................................
FD549674       --> ..................................................
FY450450       --> ..................................................
FD971162       --> ..................................................
FD979245       --> ..................................................
FD544007       --> ATGATCCATTTTGTATGGATGATAAG........................
EY940365       --> ..................................................
EW734540       --> ..................................................
FD964719       --> ATGATCCATTTTGTATGGATGATAAGACTCTT-AAGATATAGCTCAGCCT

               1451   -   1501
UN16965        --> CGTCTTGTTTCTGTGACTCTTGAATTGTATCATTTTTTTGTCAAGTGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY431390       <-- ..................................................
FY434161       <-- ..................................................
FY431403       <-- ..................................................
EW728949       <-- CGTCTTGTTTCTGTGACTCTTGAATTGTATCATTTTT-CGTCAAGTGATT
FD975327       <-- CGTCTTGTTTCTGTG...................................
FD539708       <-- CGTCTTGTTTCTGTGACg................................
EW738375       <-- CATCTTGTTTCTGTGACTCTTGAATTGTATCATTTTTTTGTCAAGTGATT
EY936134       <-- CGTCTTGTTTCTGTGc..................................
EX891713       <-- CGTCTTGTTTCT......................................
EX908975       <-- CGTCTTGTTTCTGTGAC.................................
EX887597       --> ..................................................
EW724282       --> ..................................................
FD562143       --> ..................................................
EY941898       --> ..................................................
FD549674       --> ..................................................
FY450450       --> ..................................................
FD971162       --> ..................................................
FD979245       --> ..................................................
FD544007       --> ..................................................
EY940365       --> ..................................................
EW734540       --> ..................................................
FD964719       --> CGTCTCGTTTCTGTGACTCTTGAATTGTATCATTTTTTTGTCAAGTGATT

               1501   -   1551
UN16965        --> TGTGTTTGG
                   ~~~~~~~~~
FY431390       <-- .........
FY434161       <-- .........
FY431403       <-- .........
EW728949       <-- TGTGTTTG.
FD975327       <-- .........
FD539708       <-- .........
EW738375       <-- TGTGTTTGG
EY936134       <-- .........
EX891713       <-- .........
EX908975       <-- .........
EX887597       --> .........
EW724282       --> .........
FD562143       --> .........
EY941898       --> .........
FD549674       --> .........
FY450450       --> .........
FD971162       --> .........
FD979245       --> .........
FD544007       --> .........
EY940365       --> .........
EW734540       --> .........
FD964719       --> TGTGTTTGG