RadishBase

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Alignment for radish unigene UN16986

               1      -     51
UN16986        --> CTAAACCGCTTGCTTCTCCTCCAAATCGTCGCCTCGCCTCGCCGATCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441254       <-- ..................................................
FY439215       <-- ..................................................
EW727745       <-- ..................................................
EV545041       <-- ..................................................
EW739172       <-- ..................................................
EX775738       <-- ..................................................
EX891932       <-- ..................................................
EX752233       <-- ..................................................
EY894864       <-- ..................................................
FD977706       <-- ..................................................
EV572367       <-- ..................................................
FD531620       <-- ..................................................
EX764527       --> CTAAACCGCTTGCTTCTCCTCCAAATCGTCACCTCGCC-----GATCTCT
EX748230       --> ggAAACCGCTTGCTTCTCCTCCAAATCGTCACCTCGCC-----GATCTCT
FD955528       --> ggAAACCGCTTGCTTCTCCTCCAAATCGTCGCCTCGCCTCGCCGATCTCT
FY430831       --> .............TTCTCCTCCAA-TCGTCGCCTCGCCTCGCCGATCTCT
EX887896       --> ..................................................
EX771649       --> ..................................................
FD536091       --> ..................................................
EV549600       --> ..................................................
EW723410       --> ..................................................
FD982060       --> ..................................................
EV568241       --> ..................................................
EV568369       --> ..................................................
EV567420       --> ..................................................

               51     -    101
UN16986        --> CTCTCAGCATCTCCGATCAAAAACCATGAGCAAAGGTCCAGGTCTATTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441254       <-- ..................................................
FY439215       <-- ..................................................
EW727745       <-- ..................................................
EV545041       <-- ..................................................
EW739172       <-- ..................................................
EX775738       <-- ..................................................
EX891932       <-- ..................................................
EX752233       <-- ..................................................
EY894864       <-- ..................................................
FD977706       <-- ..................................................
EV572367       <-- ..................................................
FD531620       <-- ..................................................
EX764527       --> CTCTCAGCATCTCCGATCAAAAACCATGAGCAAAGGTCCAGGTCTATTCG
EX748230       --> CTCTCAGCACCTCCGATCAAAAACCATGAGCAGAGGTCCAGGTCTATTCG
FD955528       --> CTCTCAGCATCTCCGATCAAAAACCATGAGCAAAGGTCCAGGTCTATTCG
FY430831       --> CTCT--GCATCTCCGATCAAAAACCATGAGCAAAGGTCCAGGTCTATTCG
EX887896       --> ..................................GGTCCAGGTCTATTCG
EX771649       --> ..................................................
FD536091       --> ..................................................
EV549600       --> ..................................................
EW723410       --> ..................................................
FD982060       --> ..................................................
EV568241       --> ..................................................
EV568369       --> ..................................................
EV567420       --> ..................................................

               101    -    151
UN16986        --> CTGATATCGGCAAGAAAGCCAAAGATCTGTTGACGAGAGACTACAACACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441254       <-- ..................................................
FY439215       <-- ..................................................
EW727745       <-- ..................................................
EV545041       <-- ..................................................
EW739172       <-- ..................................................
EX775738       <-- ..................................................
EX891932       <-- ..................................................
EX752233       <-- ..................................................
EY894864       <-- ..................................................
FD977706       <-- ..................................................
EV572367       <-- ..................................................
FD531620       <-- ..................................................
EX764527       --> CTGATATCGGCAAGAAAGCCAAAGATCTGTTGACGAGAGACTACAACACC
EX748230       --> CTGATACCGGCAAGAAAGCCAAAGATCTGTTGACGAGAGACTACAACACC
FD955528       --> CTGATATCGGCAAGAAAGCCAAAGATCTGTTGACGAGAGACTACAACACC
FY430831       --> CTGATATCGGCAAGAAAGCCAAAGATCTGTTGACGAGAGACTACAACACC
EX887896       --> CTGATATCGGCAAGAAAGCCAAAGATCTGTTGACGAGAGACTACAACACC
EX771649       --> .............................TTGACGAGAGACTACAACACC
FD536091       --> ..............................................gACC
EV549600       --> ................................................gC
EW723410       --> ..................................................
FD982060       --> ..................................................
EV568241       --> ..................................................
EV568369       --> ..................................................
EV567420       --> ..................................................

               151    -    201
UN16986        --> GATCAGAAATTCAGCATCTCCACCTACAGTGCCTCCGGCGTGGCACTTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441254       <-- ..................................................
FY439215       <-- ..................................................
EW727745       <-- ..................................................
EV545041       <-- ..................................................
EW739172       <-- ..................................................
EX775738       <-- ..................................................
EX891932       <-- ..................................................
EX752233       <-- ..................................................
EY894864       <-- ..................................................
FD977706       <-- ..................................................
EV572367       <-- ..................................................
FD531620       <-- ..................................................
EX764527       --> GATCAGAAATTCAGCATCTCCACCTACAGTGCCTCCGGCGTGGCACTTAC
EX748230       --> GATCAGAAATTCAGCATCTCCACCTACAGTGCCTCCGGCGTGGCACTTAC
FD955528       --> GATCAGAAATTCAGCATCTCCACCTACAGTGCCTCCGGCGTGGCACTTAC
FY430831       --> GATCAGAAATTCAGTATCTCCACCTACAGTGCTTCCGGCGTGGCACTTAC
EX887896       --> GATCAGAAATTCAGTATCTCCACCTACAGTGCTTCCGGCGTGGCACTTAC
EX771649       --> GATCAGAAATTCAGCATCTCCACCTACAGTGCCTCCGGCGTGGCACTTAC
FD536091       --> GATCAGAAATTCAGCATCTCCACCTACAGTGCCTCCGGCGTGGCACTTAC
EV549600       --> GATCAGAAATTCAGCATCTCCACCTACAGAGCCTCTGGCGTGGCACTTAC
EW723410       --> ...........gAGCATCCCCACCTACAGTGCCTCCGGCGTCGGACTTAC
FD982060       --> ..................................................
EV568241       --> ..................................................
EV568369       --> ..................................................
EV567420       --> ..................................................

               201    -    251
UN16986        --> GTCTACTGCTCTGAAGAAAGGAGGAGTGCATGCTGCTGATGTTACCTCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441254       <-- ................................................CC
FY439215       <-- ..................................................
EW727745       <-- ..................................................
EV545041       <-- ..................................................
EW739172       <-- ..................................................
EX775738       <-- ..................................................
EX891932       <-- ..................................................
EX752233       <-- ..................................................
EY894864       <-- ..................................................
FD977706       <-- ..................................................
EV572367       <-- ..................................................
FD531620       <-- ..................................................
EX764527       --> GTCTACTGCTCTGAAGAAAGGAGGAGTGCATGCTGCTGATGTTACCTCCC
EX748230       --> GTCTACTGCTCTGAAGAAAGGAGGAGTGCATGCTGCTGATGTTACCTCCC
FD955528       --> GTCTACTGCTCTGAAGAAAGGAGGAGTGCATGCTGCTGATGTTACCTCCC
FY430831       --> GTCTACTGCTCTGAAGAAAGGAGGAGTGCATGCTGCTGATGTTACCTCCC
EX887896       --> GTCTACTGCTCTGAAGAAAGGAGGAGTGCATGCTGCTGATGTTACCTCCC
EX771649       --> GTCTACTGCTCTGAAGAAAGGAGGAGTTCATGCTGCTGATGTTACCTCCC
FD536091       --> GTCTACTGCTCTGAAGAAAGGAGGAGTGCATGCTGCTGATGTTACCTCCC
EV549600       --> GTCTACTGCTCTGAAGAAAGGAGGAGTGCATGCTGCTGATGTTACCTCCC
EW723410       --> GTCTACTGCTCTGAAGAAAGGAGGAGTGCATGCTGCTGATGTTACCTCCC
FD982060       --> ..................................................
EV568241       --> ..................................................
EV568369       --> ..................................................
EV567420       --> ..................................................

               251    -    301
UN16986        --> AATACAAGTACAAGAATGCTGTCTTCGATGTCAAAGTCGACACTGATTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441254       <-- AATACAAGTACAAGAATGCTGTCTTCGATGTCAAAGTCGACACTGATTCT
FY439215       <-- ..........CAAGAATGCTGTCTTCGATGTCAAAGTCGACACTGATTCT
EW727745       <-- ..................................................
EV545041       <-- ..................................................
EW739172       <-- ..................................................
EX775738       <-- ..................................................
EX891932       <-- ..................................................
EX752233       <-- ..................................................
EY894864       <-- ..................................................
FD977706       <-- ..................................................
EV572367       <-- ..................................................
FD531620       <-- ..................................................
EX764527       --> AATACAAGTACAAGAATGCTGTCTCCGATGTCAAAGTCGACACTGATTCT
EX748230       --> AATACAAGTACAAGAATGCTGTCTTCGATGTCAAAGTCGACACTGATTCT
FD955528       --> AATACAAGTACAAGAATGCTGTCTTCGATGTCAAAGTCGACACTGATTCT
FY430831       --> AATACAAGTACAAGAATGCTGTCTTCGATGTCAAAGTCGACACTGATTCT
EX887896       --> AATACAAGTACAAGAATGCTGTCTTCGATGTCAAAGTCGACACTGATTCT
EX771649       --> AATACAAGTACAAGAATGCTGTCTTCGATGTCAAAGTCGACACTGGTTCT
FD536091       --> AATACAAGTACAAGAATGCTGTCTTCGATGTCAAAGTCGACACTGATTCT
EV549600       --> AATACAAGTACAAGAATGCTGTCTTCGATGTCAAAGTCGACACTGATTCT
EW723410       --> AATACAAGTACAAGAATGCTGTCTTCGATGTCAAAGTCGACACTGATTCT
FD982060       --> ..................................................
EV568241       --> ..................................................
EV568369       --> ..................................................
EV567420       --> ..................................................

               301    -    351
UN16986        --> ACTATTTTGACAACTGTCACATTCACCGAGATTCTCCCATCCACCAAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441254       <-- ACTATTTTGACAACAGTCACATTCACCGAGATTCTCCCATCCACCAAAGC  Raphanus sativus cv GSK3-1
FY439215       <-- ACTATTTTGACAACAGTCACATTCACCGAGATTCTCCCATCCACCAAAGC  Raphanus sativus cv GSK3-1
EW727745       <-- ................TCACATTCACCGAGATTCTCCCATCCACCAAAGC  Raphanus sativus cv Early Scarlet Globe
EV545041       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW739172       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX775738       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX891932       <-- ..................................................  Raphanus sativus var. oleiformis
EX752233       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY894864       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD977706       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572367       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD531620       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX764527       --> ACTATTTTGACTACTGTCACATTCACCGAGATTCTCCCATCGACCAAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX748230       --> ACTATTTTGACTACTGCCACATTCACCGAGATTCTCCCATCGACCAAAGC  Raphanus raphanistrum subsp. maritimus
FD955528       --> ACTATTTTGACTACTGTCACATTCACCGAGATTCTCCCATCGACCAAAGC  Raphanus sativus cv Rat-Tail Radish #3870
FY430831       --> ACTATTTTGACAACAGTCACATTCACCGAGATTCTCCCATCCACCAAAGC  Raphanus sativus cv GSK3-1
EX887896       --> ACTATTTTGACAACTGTCACATTCACCGAGATTCTCCCATCCACCAAAGC  Raphanus sativus var. oleiformis
EX771649       --> ACTATTTTGACAACTGTCACATTCAACGAGATTCTCCCATCCACCAAAGC  Raphanus raphanistrum subsp. landra
FD536091       --> ACTATTTTGACTACTGTCACATTCACCGAGATTCTCCCATCGACCAAAGC  Raphanus raphanistrum subsp. maritimus
EV549600       --> ACTATTTTGACTACTGTCACATTCACCGAGATTCTCCCATCGACCAAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW723410       --> ACTATTTTGACAACAGTCACATTCACCGAGATTCTCCCATCCACCAAAGC  Raphanus sativus cv Early Scarlet Globe
FD982060       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV568241       --> ..................................................  Raphanus raphanistrum subsp. landra
EV568369       --> ..................................................  Raphanus raphanistrum subsp. landra
EV567420       --> ..................................................  Raphanus raphanistrum subsp. landra

               351    -    401
UN16986        --> CATTGCCTCCTTCAAAGTCCCTGACAACAGCTCTGGCAAGCTCGAGGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441254       <-- CATTGCCTCCTTCAAAGTCCCTGACAACAGCTCTGGCAAGCTCGAGGTTC
FY439215       <-- CATTGCCTCCTTCAAAGTCCCTGACAACAGCTCTGGCAAGCTCGAGGTTC
EW727745       <-- CATTGCCTCCTTCAAAGTCCCTGACAACAGCTCTGGCAAGCTCGAGGTTC
EV545041       <-- ..........TTCAAAGTCCCTGACAACAGCTCTGGCAAGCTCGAGGTTC
EW739172       <-- ................agtCCTGACAACAGCTCTGGCAAGCTCGAGGTTC
EX775738       <-- ........................CAACAGCTCTGGCAAGCTCGAGGTTC
EX891932       <-- ..........................ACAGCTCTGGCAAGCTCGAGGTTC
EX752233       <-- ..................................................
EY894864       <-- ..................................................
FD977706       <-- ..................................................
EV572367       <-- ..................................................
FD531620       <-- ..................................................
EX764527       --> CATTGCCTCCTTCAAAGTCCCTGACAACAGCTCTGGCAAGCTCGAGGTTC
EX748230       --> CATTGCCTCCTTCAAAGTCCCTGACAACAGCTCTGGCAAGCTCGAGGTTC
FD955528       --> CATTGCCTCCTTCAAAGTCCCTGACAACAGCTCTGGCAAGCTCGAGGTTC
FY430831       --> CATTGCCTCCTTCAAAGTCCCTGACAACAGCTCTGGCAAGCTCGAGGTTC
EX887896       --> CATTGCCTCCTTCAAAGTCCCTGACAACAGCTCTGGCAAGCTCGAGGTTC
EX771649       --> CATTGCCTCCTTCAAAGTCCCTGACAACAGCTCTGGCAAGCTCGAGGTTC
FD536091       --> CATTGCCTCCTTCAAAGTCCCTGACAACAGCTCTGGCAAGCTCGAGGTTC
EV549600       --> CATTGCCTCCTTCAAAGTCCCTGACAACAGCTCTGGCAAGCTCGAGGTTC
EW723410       --> CATTGCCTCCTTCAAAGTCCCTGACAACAGCTCTGGCAAGCTCGAGGTTC
FD982060       --> ..................................................
EV568241       --> ..................................................
EV568369       --> ..................................................
EV567420       --> ..................................................

               401    -    451
UN16986        --> AATACTTCCACGACCACGCAACAGTTACCGCTGCTGCAGCTTTGAAGCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441254       <-- AATACTTCCACGACCACGCAACAGTTACCGCTGCTGCAGCTTTGAAGCAG  Raphanus sativus cv GSK3-1
FY439215       <-- AATACTTCCACGACCACGCAACAGTTACCGCTGCTGCAGCTTTGAAGCAG  Raphanus sativus cv GSK3-1
EW727745       <-- AATACTTCCACGACCACGCAACAGTTACCGCTGCTGCAGCGTTGAAGCAG  Raphanus sativus cv Early Scarlet Globe
EV545041       <-- AATACTTCCACGACCACGCAACTGTTACCGCTGCTGCAGCTTTGAAGCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW739172       <-- AATACTTCCACGACCACGCAACTGTTACCGCTGCTGCAGCTTTGAAGCAG  Raphanus sativus cv Rat-Tail Radish #3870
EX775738       <-- AGTACTTCCACGACCACGCAACTGTTACCGCTGCTGCAGCTTTGAAGCAG  Raphanus raphanistrum subsp. landra
EX891932       <-- AATACTTCCACGACCACGCAACAGTTACCGCTGCTGCAGCTTTGAAGCAG  Raphanus sativus var. oleiformis
EX752233       <-- ...................................GCAGCTTTGAAGCAG  Raphanus raphanistrum subsp. maritimus
EY894864       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD977706       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572367       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD531620       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX764527       --> AATACTTCCACGACCACGCAACTGTTACCGCTGCTGCAGCTTTGAAGCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX748230       --> AATACTTCCACGACCACGCAACAGTTACCGCTGCTGCAGCTTTGAAGCAG  Raphanus raphanistrum subsp. maritimus
FD955528       --> AATACTTCCACGACCACGCAACAGTTACCGCTGCTGCAGCTTTGAAGCAG  Raphanus sativus cv Rat-Tail Radish #3870
FY430831       --> AATACTTCCACGACCACGCAACAGTTACCGCTGCTGCAGCTTTGAAGCAG  Raphanus sativus cv GSK3-1
EX887896       --> AATACTTCCACGACCACGCAACAGTTACCGCTGCTGCAGCTTTGAAGCAG  Raphanus sativus var. oleiformis
EX771649       --> AGTACTTCCACGACCACGCAACTGTTACCGCTGCTGCAGCTTTGAAGCAG  Raphanus raphanistrum subsp. landra
FD536091       --> AATACTTCCACGACCACGCAACTGTTACCGCTGCTGCAGCTTTGAAGCAG  Raphanus raphanistrum subsp. maritimus
EV549600       --> AATACTTCCACGACCACGCAACTGTTACCGCTGCTGCAGCTTTGAAGCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW723410       --> AATACTTCCACGACCACGCAACAGTTACCGCTGCTGCAGCGTTGAAGCAG  Raphanus sativus cv Early Scarlet Globe
FD982060       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV568241       --> ..................................................  Raphanus raphanistrum subsp. landra
EV568369       --> ..................................................  Raphanus raphanistrum subsp. landra
EV567420       --> ..................................................  Raphanus raphanistrum subsp. landra

               451    -    501
UN16986        --> AACCCGTTGATCGACATAACAGCCACTCTAGGCACACCAGTCATCTCATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441254       <-- AATCCGTTGATCGACATAACAGCCACTCTAGGCACACCAGTCATCTCATT
FY439215       <-- AATCCGTTGATCGACATAACAGCCACTCTAGGCACACCAGTCATCTCATT
EW727745       <-- AACCCGTTGATCGACATAACAGCCACTCTAGGCACACCAGTCATCTCATT
EV545041       <-- AACCCGTTGATCGACATAACAGCCACTCTAGGCACACCAGTCATCTCGTT
EW739172       <-- AACCCGTTGATCGACATAGCAGCCACTCTAGGCGCACCAGTCATCTCGTT
EX775738       <-- AACCCGTTGATCGACATAACAGCCACTCTAGGCACACCAGTCATCTCATT
EX891932       <-- AACCCGTTGATCGACATAACAGCCACTCTAGGTACACCAGTCATCTCATT
EX752233       <-- AACCCGTTGATCGACATAACAGCCACTTTAGGCACACCAGTCATCTCATT
EY894864       <-- ..............................GGCACACCGGTCATCTCATT
FD977706       <-- ..................................................
EV572367       <-- ..................................................
FD531620       <-- ..................................................
EX764527       --> AACCCGTTGATCGACATAACAGCCACTCTAGGCACACCGGTCATCTCATT
EX748230       --> AACCCGTTGATCGACATAACAGCCACTTTAGGCACACCAGTCATCTCATT
FD955528       --> AACCCGTTGATCGACATAACAGCCACTCTAGGCACACCAGTCATCTCATT
FY430831       --> AATCCGTTGATCGACATAACAGCCACTCTAGGCACACCAGTCATCTCATT
EX887896       --> AACCCGTTGATCGACATAACAGCCACTCTAGGTACACCAGTCATCTCATT
EX771649       --> AACCCGTTGATCGACATAACAGCCACTCTAGGCACACCAGTCATCTCATT
FD536091       --> AACCCGTTGATCGACATAACAGCCACTCTAGGCACACCGGTCATCTCATT
EV549600       --> AACCCGTTGATCGACATAACAGCCACTCTAGGCACACCAGTCATCTCGTT
EW723410       --> AACCCGTTGATCGACATAACAGCCACTCTAGGCACACCAGTCATCTCATT
FD982060       --> ..................................................
EV568241       --> ..................................................
EV568369       --> ..................................................
EV567420       --> ..................................................

               501    -    551
UN16986        --> TGGTGCTGAAGCTGGATACGACACATCCTCCAAGACTTTCACCAAGTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441254       <-- TGGTGCTGAAGCTGGATACGACACCTCCTCCAAGACTTTCACCAAGTACA  Raphanus sativus cv GSK3-1
FY439215       <-- TGGTGCTGAAGCTGGATACGACACCTCCTCCAAGACTTTCACCAAGTACA  Raphanus sativus cv GSK3-1
EW727745       <-- TGGTGCTGAAGCTGGATACGACACCTCCTCCAAGACTTTCACCAAGTACA  Raphanus sativus cv Early Scarlet Globe
EV545041       <-- TGGTGCTGAGGCTGGATATGACACATCCTCCAAGACTTTCACCAAGTACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW739172       <-- TGGTGCTGAGGCTGGATATGACACATCCTCCAAGACTTTCACCAATTACA  Raphanus sativus cv Rat-Tail Radish #3870
EX775738       <-- TGGTGCTGAAGCTGGATATGACACCTCCCCCAAGACTTTCACCAAGTACA  Raphanus raphanistrum subsp. landra
EX891932       <-- TGGTGCTGAAGCTGGATACGACACCTCCTCCAAGACTTTCACCAAGTACA  Raphanus sativus var. oleiformis
EX752233       <-- TGGTGCTGAAGCTGGATACGACACATCCTCCAAAACTTTCACCAAGTACA  Raphanus raphanistrum subsp. maritimus
EY894864       <-- TGGTGCTGAAGCTGGATACGACACATCCTCCAAAACTTTCACCAAGTACA  Raphanus raphanistrum subsp. maritimus
FD977706       <-- .........tttttttacCGACACATCCTCCAAAACTTTCACCAAGTACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572367       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD531620       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX764527       --> TGGTGCTGAAGCTGGATACGACACATCCTCCAAAACTTTCACCAAGTACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX748230       --> TGGTGCTGAAGCTGGATACGACACATCCTCCAAAACTTTCACCAAGTACA  Raphanus raphanistrum subsp. maritimus
FD955528       --> TGGTGCTGAAGCTGGATACGACACATCCTCCAAAACTTTCACCAAGTACA  Raphanus sativus cv Rat-Tail Radish #3870
FY430831       --> TGGTGCTGAAGCTGGATACGACACCTCCTCCAAGACTTTCACCAAGTACA  Raphanus sativus cv GSK3-1
EX887896       --> TGGTGCTGAAGCTGGATACGACACCTCCTCCAAGACTTTCACCAAGTACA  Raphanus sativus var. oleiformis
EX771649       --> TGGTGCTGAAGCTGGATATGACACCTCCCCCAAGACTTTCACCAAGTACA  Raphanus raphanistrum subsp. landra
FD536091       --> TGGTGCTGAAGCTGGATACGACACATCCTCCAAAACTTTCACCAAGTACA  Raphanus raphanistrum subsp. maritimus
EV549600       --> TGGTGCTGAGGCTGGATATGACACATCCTCCAAGACTTTCACCAAGTACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW723410       --> TGGTGCTGAAGCTGGATACGACACCTCCTCCAAGACTTTCACCAAGTACA  Raphanus sativus cv Early Scarlet Globe
FD982060       --> ...........tttttacCGACACATCCTCCAAAACTTTCACCAAGTACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV568241       --> ..................................................  Raphanus raphanistrum subsp. landra
EV568369       --> ..................................................  Raphanus raphanistrum subsp. landra
EV567420       --> ..................................................  Raphanus raphanistrum subsp. landra

               551    -    601
UN16986        --> ACGCTGGTATCAGTGTGACCAAACCTGATGCATGCGCTTCCATCATACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441254       <-- ACGCTGGAATCAGTGTGACCAAACCTGATGCATGCGCTTCCATCATACTG  Raphanus sativus cv GSK3-1
FY439215       <-- ACGCTGGAATCAGTGTGACCAAACCTGATGCATGCGCTTCCATCATACTG  Raphanus sativus cv GSK3-1
EW727745       <-- ACGCCGGTATCAGTGTGACCAAACCCGATGCATGCGCTTCCATCATACTG  Raphanus sativus cv Early Scarlet Globe
EV545041       <-- ACGCTGGTATCAGTGTGACCAAACCTGATGCATGCGCTTCCATCATACTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW739172       <-- ACGCTGGTATCAGTGTGACCAAACCTGATGCATGCGCTTCCATCATACTT  Raphanus sativus cv Rat-Tail Radish #3870
EX775738       <-- ACGCTGGTATCAGTGTGACCAAACCTGATGCATGCGCTTCCATCATACTG  Raphanus raphanistrum subsp. landra
EX891932       <-- ACGCTGGAATCAGTGTGACCAAACCTGATGCATGCGCTTCCATCATACTG  Raphanus sativus var. oleiformis
EX752233       <-- ACGCTGGTATCAGTGTGACCAAACCAGACGCATGCGCTTCCATCATACTG  Raphanus raphanistrum subsp. maritimus
EY894864       <-- ACGCTGGTATCAGTGTGACCAAACCAGACGCATGCGCTTCCATCATACTG  Raphanus raphanistrum subsp. maritimus
FD977706       <-- ACGCTGGTATCAGTGTGACCAAACCAGACGCATGCGCTTCCATCATACTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572367       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD531620       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX764527       --> ACGCTGGTATCAGTGTGACCAAACCAGACGCATGCGCTTCCATCATACTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX748230       --> ACGCTGGTATCAGTGTGACCAAACCAGACGCATGCGCTTCCATCATACTG  Raphanus raphanistrum subsp. maritimus
FD955528       --> ACGCTGGTATCAGTGTGACCAAACCAGACGCATGCGCTTCCATCATACTG  Raphanus sativus cv Rat-Tail Radish #3870
FY430831       --> ACGCTGGAATCAGTGTGACCAAACCTGATGCATGCGCTTCCATCATACTG  Raphanus sativus cv GSK3-1
EX887896       --> ACGCTGGAATCAGTGTGACCAAACCTGATGCATGCGCTTCCATCATACTG  Raphanus sativus var. oleiformis
EX771649       --> ACGCTGGTATCAGTGTGACCAAACCTGATGCATGCGCTTCCATCATACTG  Raphanus raphanistrum subsp. landra
FD536091       --> ACGCTGGTATCAGTGTGACCAAACCAGACGCATGCGCTTCCATCATACTG  Raphanus raphanistrum subsp. maritimus
EV549600       --> ACGCTGGTATCAGTGTGACCAAACCTGATGCATGCGCTTCCATCATACTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW723410       --> ACGCCGGTATCAGTGTGACCAAACCCGATGCATGCGCTTCCATCATACTG  Raphanus sativus cv Early Scarlet Globe
FD982060       --> ACGCTGGTATCAGTGTGACCAAACCAGACGCATGCGCTTCCATCATACTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV568241       --> ....gGGTATCAGTGTGACCAAACCAGACGCATGCGCTTCCATCATACTG  Raphanus raphanistrum subsp. landra
EV568369       --> ...........gGTGTGACCAAACCAGACGCATGCGCTTCCATCATACTG  Raphanus raphanistrum subsp. landra
EV567420       --> ..................................................  Raphanus raphanistrum subsp. landra

               601    -    651
UN16986        --> GGAGACAAAGGAGACTCGATCAAAGCATCTTACCTTCACCACCTTGACGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441254       <-- GGAGACAAAGGAGACTCGATCAAAGCATCTTACCTTCACCACCTTGACGA
FY439215       <-- GGAGACAAAGGAGACTCGATCAAAGCATCTTACCTTCACCACCTTGACGA
EW727745       <-- GGAGACAAAGGAGACTCGATCAAAGCATCTTACCTTCACCACCTTGACGA
EV545041       <-- GGAGACAAAGGAGACTCGATCAAAGCATCTTACCTTCACCCCCTTGACGA
EW739172       <-- GGAGACAAAGGAGACTCGATCAAAGCATCTTACCTTCACCACCTTGACGA
EX775738       <-- GGAGACAAAGGAGACTCGATCAAAGCATCTTACCTTCACCACCTTGACGA
EX891932       <-- GGAGACAAAGGAGACTCGATCAAAGCATCTTACCTTCACCACCTTGACGA
EX752233       <-- GGAGACAAAGGAGACTCGATCAAAGCATCTTACCTTCACCACCTTGAGGA
EY894864       <-- GGAGACAAAGGAGACTCGATCAAAGCATCTTACCTTCACCACCTTGACGA
FD977706       <-- GGAGACAAAGGAGACTCGATCAAAGCATCTTACCTTCACCACCTTGACGA
EV572367       <-- ..................................................
FD531620       <-- ..................................................
EX764527       --> GGAGACAAAGGAGACTCGATCAAAGCATCTTACCTTCACCACCTTGACGA
EX748230       --> GGAGACAAAGGAGACTCGATCAAAGCATCTTACCTTCACCACCTTGACGA
FD955528       --> GGAGACAAAGGAGACTCGATCAAAGCATCTTACCTTCACCACCTTGACGA
FY430831       --> GGAGACAAAGGAGACTCGATCAAAGCATCTTACCTTCACCACCTTGACGA
EX887896       --> GGAGACAAAGGAGACTCGATCAAAGCATCTTACCTTCACCACCTTGACGA
EX771649       --> GGAGACAAAGGAGACTCGATCAAAGCATCTTACCTTCACCACCTTGAC-A
FD536091       --> GGAGACAAAGGAGACTCGATCAAAGCATCTTACCTTCACCACCTTGACGA
EV549600       --> GGAGACAAAGGAGACTCGATCAAAGCATCTTACCTTCACCACCTTGACGA
EW723410       --> GGAGACAAAGGAGACTCGATCAAAGCATCTTACCTTCACCACCTTGACGA
FD982060       --> GGAGACAAAGGAGACTCGATCAAAGCATCTTACCTTCACCACCTTGACGA
EV568241       --> GGAGACAAAGGAGACTCGATCAAAGCATCTTACCTTCACCACCTTGACGA
EV568369       --> GGAGACAAAGGAGACTCGATCAAAGCATCTTACCTTCACCACCTTGACGA
EV567420       --> ..................................................

               651    -    701
UN16986        --> ATCCAAGAGAAGCGCAGCAGTTGGTGAGGTTTACAGGAAGTTCTCAACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441254       <-- ATCCAAGAGAAGCGCAGCAGTTGGTGAGGTTTACAGGAAGTTCTCAACCA  Raphanus sativus cv GSK3-1
FY439215       <-- ATCCAAGAGAAGCGCAGCAGTTGGTGAGGTTTACAGGAAGTTCTCAACCA  Raphanus sativus cv GSK3-1
EW727745       <-- ATCCAAGAGAAGCGCAGCAGTTGGTGAGGTTTACAGGAAGTTCTCAACCA  Raphanus sativus cv Early Scarlet Globe
EV545041       <-- ATCCAAGAGAAGCGCAGCAGTTGGTGAGGTTTACAGGAAGTTCTCAACCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW739172       <-- ATCCAAGAGAAGCGCAGCAGTTGGTGAGGTTTACAGGAAGTTCTCAACCA  Raphanus sativus cv Rat-Tail Radish #3870
EX775738       <-- ATCCAAGAGAAGCGCAGCAGTTGGTGAGGTTTACAGGAAGTTCTCAACCA  Raphanus raphanistrum subsp. landra
EX891932       <-- ATCCAAGAGAAGCGCAGCAGTTGGTGAGGTTTACAGGAAGTTCTCAACCA  Raphanus sativus var. oleiformis
EX752233       <-- ATCCAAGAGAAACGCAGCAGTTGGTGAGGTTTACAGGAAGTTCTCTACCA  Raphanus raphanistrum subsp. maritimus
EY894864       <-- ATCCAAGAGAAGCGCAGCAGTTGGTGAGGTTTACAGGAAGTTCTCTACCA  Raphanus raphanistrum subsp. maritimus
FD977706       <-- ATCCAAGAGAAGCGCAGCAGTTGGTGAGGTTTACAGGAAGTTCTCTACCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572367       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD531620       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX764527       --> ATCCAAGAGAAGCGCAGCAGTTGGTGAG-TTTACAGGAAGTTCTCTACCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX748230       --> ATCCA-GAGAAACGCAGCA...............................  Raphanus raphanistrum subsp. maritimus
FD955528       --> ATCCAAGAGAAGC-CAGCAGTTGGTGAGGTTTACAGGAAGTTCTCTACCA  Raphanus sativus cv Rat-Tail Radish #3870
FY430831       --> ATCCAAGAGAAGCGCAGCAGTTGGTGAGGTTTACAGGAAGTTCTCAACCA  Raphanus sativus cv GSK3-1
EX887896       --> ATCCAAGAGAAGCGCAGCAGTTGGTGAGGTTTACAGGAAGTTCTCAACCA  Raphanus sativus var. oleiformis
EX771649       --> ATCCAAGAGAAGCGCAGCAGTTGGTGAGGTTTACAGGAAGTTCTCA-CCA  Raphanus raphanistrum subsp. landra
FD536091       --> ATCCAAGAGAAGCGCAGCAGTTGGTGAGGTTTACAGGAAGTTCTCTACCA  Raphanus raphanistrum subsp. maritimus
EV549600       --> ATCCAAGAGAAGCGCAGCAGTTGGTGAGGTTTACAGGAAGTTCTCAACCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW723410       --> ATCCAAGAGAAGCGCAGCAGTTGGTGAGGTTTACAGGAAGTTCTCAACCA  Raphanus sativus cv Early Scarlet Globe
FD982060       --> ATCCAAGAGAAGCGCAGCAGTTGGTGAGGTTTACAGGAAGTTCTCTACCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV568241       --> ATCCAAGAGAAGCGCAGCAGTTGGTGAGGTTTACAGGAAGTTCTCTACCA  Raphanus raphanistrum subsp. landra
EV568369       --> ATCCAAGAGAAGCGCAGCAGTTGGTGAGGTTTACAGGAAGTTCTCTACCA  Raphanus raphanistrum subsp. landra
EV567420       --> ..................................................  Raphanus raphanistrum subsp. landra

               701    -    751
UN16986        --> ATGAAAACACGATAACGGTTGGTGGGCTATATGCGATTGATCGTACGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441254       <-- ATGAGAACACGATAACTGTTGGTGGACTGTATGCGATTGATCGTACGACT  Raphanus sativus cv GSK3-1
FY439215       <-- ATGAGAACACGATAACTGTTGGTGGACTGTATGCGATTGATCGTACGACT  Raphanus sativus cv GSK3-1
EW727745       <-- ATGAAAACACGATAACGGTTGGTGGGCTATATGCGATTGATCGTACGACT  Raphanus sativus cv Early Scarlet Globe
EV545041       <-- ATGAAAACACGATAACGGTTGGTGGACTATATGCGATTGATCGTACGACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW739172       <-- ATGAAAACACGATAACGGTTGGTGGACTATATGCGATTGATCGTACGACT  Raphanus sativus cv Rat-Tail Radish #3870
EX775738       <-- ATGAAAACACGATAACGGTTGGTGGACTGTATGCGATTGATCGTACGACT  Raphanus raphanistrum subsp. landra
EX891932       <-- ATGAAAACACGATAACGGTTGGTGGACTGTATGCGATTGATCGTACGACT  Raphanus sativus var. oleiformis
EX752233       <-- ATGAAAACATGATAACGGTTGGTGGGCTATATGCGATCGATCGTACGACC  Raphanus raphanistrum subsp. maritimus
EY894864       <-- ATGAAAACACGATAACGGTTGGTGGGCTATATGCGATCGATCGTACGACC  Raphanus raphanistrum subsp. maritimus
FD977706       <-- ATGAAAACACGATAACGGTTGGTGGGCTATATGCGATCGATCGTACGACC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572367       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD531620       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX764527       --> ATGAAA-CACGATAACGGT-GGTGGGCTATATGCGATCGATCGTACGAC-  Raphanus raphanistrum subsp. raphanistrum (NY)
EX748230       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD955528       --> ATGAAAACACGATAACCGGTGGTGG.........................  Raphanus sativus cv Rat-Tail Radish #3870
FY430831       --> ATGAGAACACGATAACTGTTGGTGGACTGTATGCGATTGATCGTACGACT  Raphanus sativus cv GSK3-1
EX887896       --> ATGAAAACACGATAACGGTTGGTGGACTGTATGCGATTGATCGTACGACT  Raphanus sativus var. oleiformis
EX771649       --> ATGAAA-CACGATAACGGTTGGTGGACTGTATGCGATTGATCGTACGACT  Raphanus raphanistrum subsp. landra
FD536091       --> ATGAAAACACGATAACGGTTGGTGGGCTATATGCGATCGATCGTACGACC  Raphanus raphanistrum subsp. maritimus
EV549600       --> ATGAAAACACGATAACGGTTGGTGGACTATATGCGATTGATCGTACGACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW723410       --> ATGAAAACACGATAACGGTTGGTGGGCTATATGCGATTGATCGTACGACT  Raphanus sativus cv Early Scarlet Globe
FD982060       --> ATGAAAACACGATAACGGTTGGTGGGCTATATGCGATCGATCGTACGACC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV568241       --> ATGAAAACACGATAACGGTTGGTGGGCTATATGCGATCGATCGTACGACC  Raphanus raphanistrum subsp. landra
EV568369       --> ATGAAAACACGATAACGGTTGGTGGGCTATATGCGATCGATCGTACGACC  Raphanus raphanistrum subsp. landra
EV567420       --> ..................................................  Raphanus raphanistrum subsp. landra

               751    -    801
UN16986        --> ACAGTGAAAGCTAAGCTGAACAACAATGGCAAACTCGGTGCTCTGCTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441254       <-- ACAGTGAAAGCTAAGCTGAACAACAATGGCAAACTCGGTGCTCTGCTTCA
FY439215       <-- ACAGTGAAAGCTAAGCTGAACAACAATGGCAAACTCGGTGCTCTGCTTCA
EW727745       <-- ACAGTGAAAGCTAAGCTGAACAACAATGGCAAACTCGGTGTTCTGCTTCA
EV545041       <-- ACAGTGAAAGCTAAGCTGAACAACAATGGCAAACTCGGTGCTCTGCTTCA
EW739172       <-- ACAGTGAAAGCTAAGCTGAACAACAATGGCAAACTCGGTGCTCTGCTTCA
EX775738       <-- ACAGTGAAAGCTAAGCTGAACAACAATGGCAAACTCGGTGCCCTGCTTCA
EX891932       <-- ACAGTGAAAGCTAAGCTGAACAACAATGGCAAACTCGGTGCTCTGCTTCA
EX752233       <-- ACAGTGAAAGTTAAGCTGAACAACAATGGCAAACTCGGTGTTCTGCTTCA
EY894864       <-- ACAGTGAAAGCTAAGCTGAACAACAATGGCAAACTCGGTGTTCTGCTTCA
FD977706       <-- ACAGTGAAAGCTAAGCTTAACAACAATGGCAAACTCGGTGCTCTGCTTCA
EV572367       <-- ..............ggTGAACAACA-TGGCAAACTCGGTGCTTTGCTTCA
FD531620       <-- ..................................................
EX764527       --> ACAGTGAAAGCTA-GCTGAcact...........................
EX748230       --> ..................................................
FD955528       --> ..................................................
FY430831       --> ACAGTGAAAGCTAAGCTGAACAACAATGGCAAACTCGGTGCTCTGCTTCA
EX887896       --> ACAGTGAAAGCTAAGCTGAACAACAATGGCAAACTCGGTGCTCTGCTTCA
EX771649       --> ACAGTGAA-GCTAAct..................................
FD536091       --> ACAGTGAAAGCTAAGCTGAACAACAATGGCAAACTCGGTGCTCTGCTTCA
EV549600       --> ACAGTGAAAGCTAAGCTGAACAACAATGGCAAACTCGGTGCTCTGCTTCA
EW723410       --> ACAGTGAAAGCTAAGCTGAACAACAATGGCAAACTCGGTGCTCTGCTTCA
FD982060       --> ACAGTGAAAGCTAAGCTTAACAACAATGGCAAACTCGGTGCTCTGCTTCA
EV568241       --> ACAGTGAAAGCTAAGCTGAACAACAATGGCAAACTCGGTGCTCTGCTTCA
EV568369       --> ACAGTGAAAGCTAAGCTGAACAACAATGGCAAACTCGGTGCTCTGCTTCA
EV567420       --> ..............ggTGAACAACA-TGGCAAACTCGGTGCTCTGCTTCA

               801    -    851
UN16986        --> GCACGAGGTTGTGCCCAAATCACTAGTGACTGTTTCGAGTGAGATCGACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441254       <-- GCACGAGGTTGTGCCCAAATCACTAGTGACTGTTTCGAGTGAGATCGACA
FY439215       <-- GCACGAGGTTGTGCCCAAATCACTAGTGACTGTTTCGAGTGAGATCGACA
EW727745       <-- GCACGAGGTTGTGTCCAAATCACTAGTGACTGTTTCGAGTGAGATCGACA
EV545041       <-- GCACGAGGTTTTGCCCAAATCACTAGTGACTGTTTCGAGTGAGATCGACA
EW739172       <-- GCACGAGGTTGTGCCCAAATCACTAGTGACTGTTTCGAGTGAGATCGACA
EX775738       <-- GCACGAGGTTGTGCCCAAATCACTAGTGACTGTTTCGAGTGAGATCGACA
EX891932       <-- GCACGAGGTTGTGCCCAAATCACTAGTGACTGTTTCGAGTGAGATCGACA
EX752233       <-- GCACGAGGTTGTGCCCAAATCACTAGTGACTGTTTCGAGT..........
EY894864       <-- GCACGAGGTTGTGCCCAAATCACTAGTGACTGTTTCGAGTGAGATCGACA
FD977706       <-- GCACGAGGTTGTGCCCAAATCACTAGTGACTGTTTCGAGTGAGATCGACA
EV572367       <-- GCACGAGGTTGTGCCCAAATCACTAGTGACTGTTTCGAGTGAGATCGACA
FD531620       <-- ..................................................
EX764527       --> ..................................................
EX748230       --> ..................................................
FD955528       --> ..................................................
FY430831       --> GCACGAGGTTGTGCCCAAATCACTAGTGACTGTTTCGAGTGAGATCGACA
EX887896       --> GCA...............................................
EX771649       --> ..................................................
FD536091       --> GCACGAGGTTGTGCCCAAATCACTAGTGACTGTTTCGAGTGAGATCGACA
EV549600       --> GCACGAGGTTTTGCCCAAATCACTAGTGACTGTTTCGAGTGAGATCGACA
EW723410       --> GCACGAGGTTGTGTCCAAATCACTAGTGACTGTTTCGAGTGAGATCGACA
FD982060       --> GCACGAGGTTGTGCCCAAATCACTAGTGACTGTTTCGAGTGAGATCGACA
EV568241       --> GCACGAGGTTGTGCCCAAATCACTAGTGACTGTTTCGAGTGAGATCGACA
EV568369       --> GCACGAGGTTGTGCCCAAATCACTAGTGACTGTTTCGAGTGAGATCGACA
EV567420       --> GCACGAGGTTGTGCCCAAATCACTAGTGACTGTTTCGAGTGAGATCGACA

               851    -    901
UN16986        --> CTAAGGCCTTAGACAAGCATCCAA-GGTTTGGTCTTTCTCTTGTTCTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441254       <-- CTAAGGCCTTAGACAAGCATCCAA-GGTTTGGTCTTTCTCTTGTTCTCAA  Raphanus sativus cv GSK3-1
FY439215       <-- CTAAGGCCTTAGACAAGCATCCAA-GGTTTGGTCTTTCTCTTGTTCTCAA  Raphanus sativus cv GSK3-1
EW727745       <-- CTAAGGCCTTAGACAAGCATCCAA-GGTTTGGTCTCTCTCTTGTTCTCAA  Raphanus sativus cv Early Scarlet Globe
EV545041       <-- CTAAGGCCTTAGACAAGCATCCAA-GGTTTGGTCTCTCTCTTGTTCTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW739172       <-- CTAAGGCCTTAGACAAGCATCCAA-GGTTTGGTCTCTCTCTTGTTCTCAA  Raphanus sativus cv Rat-Tail Radish #3870
EX775738       <-- CTAAGGCCTTAGACAAGCATCCAA-GGTTTGGTCTTTCTCTTGTTCTCAA  Raphanus raphanistrum subsp. landra
EX891932       <-- CTAAGGCCTTAGACAAGCATCCAA-GGTTTGGTCTTTCTCTTGTTCTCAA  Raphanus sativus var. oleiformis
EX752233       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY894864       <-- CTAAGGCCTTAGACAAGCATCCAA-GGTTTGGTCTTTTTCTTGTTCTCAA  Raphanus raphanistrum subsp. maritimus
FD977706       <-- CTAAGGCCTTAGACAAGCATCCAA-GGTTTGGTCTTTCTCTTGTTCTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572367       <-- CTAAGGCCTTAGACAAGCATCCAA-GGTTTGGTCTTTCTCTTGTTCTCAA  Raphanus raphanistrum subsp. landra
FD531620       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX764527       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX748230       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD955528       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY430831       --> CTAAGGCCTTAGACAAGCATCCAA-GGTTTGGTCTTTCTCTTGTTCTCAA  Raphanus sativus cv GSK3-1
EX887896       --> ..................................................  Raphanus sativus var. oleiformis
EX771649       --> ..................................................  Raphanus raphanistrum subsp. landra
FD536091       --> CTAAAGCCTTAGACAAGCATCCAA-GGTTTGGTCTTct............  Raphanus raphanistrum subsp. maritimus
EV549600       --> CTAAAGCCTTAGACAAGCATCCAA-AGTTTGGTCTCTCTCTTGTTCTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW723410       --> CTAAGGCCTTAGACAAGCATCCAAAGGTTTGGTCTCTCTCTTGTTCTCAA  Raphanus sativus cv Early Scarlet Globe
FD982060       --> CTAAGGCCTTAGACAAGCATCCAA-GGTTTGGTCTTTCTCTTGTTCTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV568241       --> CTAAGGCCTTAGACAAGCATCCAA-GGTTTGGTCTTTCTCTTGTTCTCAA  Raphanus raphanistrum subsp. landra
EV568369       --> CTAAGGCCTTAGACAAGCATCCAA-GGTTTGGTCTTTCTCTTGTTCTCAA  Raphanus raphanistrum subsp. landra
EV567420       --> CTAAGGCCTTAGACAAGCATCCAA-GGTTTGGTCTTTCTCTTGTTCTCAA  Raphanus raphanistrum subsp. landra

               901    -    951
UN16986        --> ACCTTGAAGGAGTCTCCCAA-CCTTTCTCTCGTATTCTCTCACGGCAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441254       <-- ACCTTGAACGAGTCTCCCAAACCTTTCTCTCGTATTCTCTCACGGCAGAG  Raphanus sativus cv GSK3-1
FY439215       <-- ACCTTGAACGAGTCTCCCAAACCTTTCTCTCGTATTCTCTCACGGCAGAG  Raphanus sativus cv GSK3-1
EW727745       <-- ACCTTGAACGAGTCTCCCAAACCTTTCTCTCGTATTCTCTCACGGCAGAG  Raphanus sativus cv Early Scarlet Globe
EV545041       <-- ACCTTGAACGAGTCTCCCAAACCTTTCTCTCGTATTCTCTCACGGCAGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW739172       <-- ACCTTGAACGAGTCTCCCAAACCTTTCTCTCGTATTCTCTCACGGCAGAG  Raphanus sativus cv Rat-Tail Radish #3870
EX775738       <-- ACCTTGAAGGAGTCTCCCAA-CCTTTCTCTCGTATTCTCTCACGGCAGAG  Raphanus raphanistrum subsp. landra
EX891932       <-- ACCTTGAACGAGTCTCCCAA-CCTTTCTCTCGTATTCTCTCACGGCAGAG  Raphanus sativus var. oleiformis
EX752233       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY894864       <-- ACCTTGAAGGAGTCTCCCAA-CCTTTCTCTCGTATTCTCTCACGGCAGAG  Raphanus raphanistrum subsp. maritimus
FD977706       <-- ACCTTGAAGGAGTCTCCCAA-CCTTTCTCTCGTATTCTCTCACGGCAGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572367       <-- ACCTTGAAGGAGTCTCCCAA-CCTTTCTCTCGTATTCTCTCACGGCAGAG  Raphanus raphanistrum subsp. landra
FD531620       <-- ................................TATTTTCTCACGGCAGAG  Raphanus raphanistrum subsp. maritimus
EX764527       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX748230       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD955528       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY430831       --> ACCTTGAAcg........................................  Raphanus sativus cv GSK3-1
EX887896       --> ..................................................  Raphanus sativus var. oleiformis
EX771649       --> ..................................................  Raphanus raphanistrum subsp. landra
FD536091       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV549600       --> ACCTTGAACGAGTCTCCCAAacctt.........................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW723410       --> ACCTTGAACGAGTCTCCCAAACCTTTCTCTCGTATTCTCTCACGGCAGAG  Raphanus sativus cv Early Scarlet Globe
FD982060       --> ACCTTGAAGGAGTCTCCCAA-CCTTTCTCTCGTATTCTCTCACGGCAGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV568241       --> ACCTTGAAGGAGTCTCCCAA-CCTTTCTCTCGTATTCTCTCACGGCAGAG  Raphanus raphanistrum subsp. landra
EV568369       --> ACCTTGAAGGAGTCTCCCAA-CCTTTCTCTCGTATTCTCTCACGGCAGAG  Raphanus raphanistrum subsp. landra
EV567420       --> ACCTTGAAGGAGTCTCCCAA-CCTTTCTCTCGTATTCTCTCACGGCAGAG  Raphanus raphanistrum subsp. landra

               951    -   1001
UN16986        --> GACCTCCCGAGAGTTTTCGTTTTACTATTTTGGAATAAATAGTTCCGCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441254       <-- GACCTCCCGAGAGTTTTCGTTTTACTATTTTGGAATAAATAGTTCCGCAG
FY439215       <-- GACCTCCCGAGAGTTTTCGTTTTACTATTTTGGAATAAATAGTTCCGCAG
EW727745       <-- GACCTCCCGAGAGTTTTCGTTTTACTATTTTGGAATAAATAGTTCCGCAG
EV545041       <-- GACCTCCCGAGAGTTTTCGTTTTACTATTTTGGAATAAATAGTTCCGCAG
EW739172       <-- GACCTCCCGAGAGTTTTCGTTTTACTATTTTGGAATAAATAGTTCCG--C
EX775738       <-- GACCTCCCGAGAGTTTTCGTTTTACTATTTTGGAATAAATAGTTCCGCAG
EX891932       <-- GACCTCCCGAGAGTTTTCGTTTTACTATTTTGGAATAAATAGTTCCGCAG
EX752233       <-- ..................................................
EY894864       <-- GACCTCCCGAGAGTTTTCGTTTTACTATTTTGGAATAAATAGTTCCGCAG
FD977706       <-- GACCTCCCGAGAGTTTTCGTTTTACTATTTTGGAATAAATAGTTCCGCAG
EV572367       <-- GACCTCCCGAGAGTTTTCGTTTTACTATTTTGGAATAAATAGTTCCGCAG
FD531620       <-- GACCTCCCGAGAGTTTTCGTTTTACTATTTTGGAATAAATAGTTCCGCAG
EX764527       --> ..................................................
EX748230       --> ..................................................
FD955528       --> ..................................................
FY430831       --> ..................................................
EX887896       --> ..................................................
EX771649       --> ..................................................
FD536091       --> ..................................................
EV549600       --> ..................................................
EW723410       --> -ACCTCCCGAGAGTTTTCGTTTTACTATTT-GGAATAAATAGTTCCGCAG
FD982060       --> GACCTCCCGAGAGTTTTCGTTTTACTATTTTGGAATAAATAGTTCCGCAG
EV568241       --> GACCTCCCGAGAGTTTTCGTTTTACTATTTTGGAATAAATAGTTCCGCAG
EV568369       --> GACCTCCCGAGAGTTTTCGTTTTACTATTTTGGAATAAATAGTTCCGCAG
EV567420       --> GACCTCCCGAGAGTTTTCGTTTTACTATTTTGGAATAAATAGTTCCGCAG

               1001   -   1051
UN16986        --> TGAAAATTGACGGTTAATTCTTTTTCGGTTATGTGTTTTTTTCTTTTAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441254       <-- TGAAAATTGACGGTTAATTCTTTTTCGGTTATGTTTTTTTTTCTTT-AAC  Raphanus sativus cv GSK3-1
FY439215       <-- TGAAAATTGACGGTTAATTCTTTTTCGGTTATGTTTTTTTTTCTTT-AAC  Raphanus sativus cv GSK3-1
EW727745       <-- TGAAAATTGACGGTTAATTCTTTTTCGGTTATGT-TTTTTTTCTTT-AAC  Raphanus sativus cv Early Scarlet Globe
EV545041       <-- TGAAAATTGACGGTTAATTCTTTTTCGGTTATGT-TTTTTTTCTTT-AAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW739172       <-- TGAAAATTGACGGTTAATTCTTTTTCGGTTATGTTTTTTTTTTCTTTAAC  Raphanus sativus cv Rat-Tail Radish #3870
EX775738       <-- TGAAAATTGACGGTTAATTCTTTTTCGGTTATGTTTTTTTTTCTTT-AAC  Raphanus raphanistrum subsp. landra
EX891932       <-- TGAAAATTGACGGTTAATTCTTTTTCGGTTATGTTTTTTTTTCTTT-AAC  Raphanus sativus var. oleiformis
EX752233       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY894864       <-- TGAAAATTGACGGTTAATTCTTTTTCGGTTATGTGTTTTTTTCTTTTAAC  Raphanus raphanistrum subsp. maritimus
FD977706       <-- TGAAAATTGACGGTTAATTCTTTTTCGGTTATGTGTTTTTTTCTTTTAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572367       <-- TGAAAATTGACGGTTAATTCTTTTTCGGTTATGTGTTTTTTTCTTTTAAC  Raphanus raphanistrum subsp. landra
FD531620       <-- TGAAAATTGACGGTTAATTCTTTTTCGGTTATGTGTTTTTTTCTTTTAAC  Raphanus raphanistrum subsp. maritimus
EX764527       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX748230       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD955528       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY430831       --> ..................................................  Raphanus sativus cv GSK3-1
EX887896       --> ..................................................  Raphanus sativus var. oleiformis
EX771649       --> ..................................................  Raphanus raphanistrum subsp. landra
FD536091       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV549600       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW723410       --> TG................................................  Raphanus sativus cv Early Scarlet Globe
FD982060       --> TGAAAATTGACGGTTAATTCTTTTTCGGTTATGTGTTTTTTTCTTTTAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV568241       --> TGAAAATTGACGGTTAATTCTTTTTCGGTTATGTGTTTTTTTCTTTTAAC  Raphanus raphanistrum subsp. landra
EV568369       --> TGAAAATTGACGGTTAATTCTTTTTCGGTTATGTGTTTTTTTCTTTTAAC  Raphanus raphanistrum subsp. landra
EV567420       --> TGAAAATTGACGGTTAATTCTTTTTCGGTTATGTGTTTTTTTCTTTTAAC  Raphanus raphanistrum subsp. landra

               1051   -   1101
UN16986        --> ATTTTTTCACTAAGCAATATTCTTGGTACATTTTTTTTAGCAAAGATGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441254       <-- ATTTTT-CACTAAGCA..................................
FY439215       <-- ATTTTTTCACTAAGCAATATTCTTGGTACATTTTTTTTAGCAAAGATGTC
EW727745       <-- ATTTTTTCACTAAGCAATATTCTTGGTACATTTTTTTTAGCAAAGATGTC
EV545041       <-- ATTTTTTCACTAAGCAATATTCTTGGTACATTTTTTTTAGCAAAGATGTC
EW739172       <-- ATTTTTTCACTAAGCAATATTCTTGGTACATTTTTTTTAGC.........
EX775738       <-- ATTTTTTCACTAAGCAATATTCTTGGTACATTTTTTTTAGCAAAGATGTC
EX891932       <-- ATTTTTTCACTAAGCAATATTCTTGGTACATTTTTTTTAGC.........
EX752233       <-- ..................................................
EY894864       <-- ATTTTTTCACTAAGCAATATTCTTGGTACATTTTTTTTAGCAAAGATGTC
FD977706       <-- ATTTTTTCACTAAGCAATATTCTTGGTgc.....................
EV572367       <-- ATTTTTTCACTAAGCAATATTCTTGGTACATTTTTTTTAGCAAAGATGTC
FD531620       <-- ATTTTTTCATTAAGCAATATTCTTGGTACATTTTTTTTAGCAAAGATGTC
EX764527       --> ..................................................
EX748230       --> ..................................................
FD955528       --> ..................................................
FY430831       --> ..................................................
EX887896       --> ..................................................
EX771649       --> ..................................................
FD536091       --> ..................................................
EV549600       --> ..................................................
EW723410       --> ..................................................
FD982060       --> ATTTTTTCACTAAGCAATATTCTTGGTgc.....................
EV568241       --> ATTTTTTCACTAAGCAATATTCTTGGTACATTTTTTTTAGCAAAGATGTC
EV568369       --> ATTTTTTCACTAAGCAATATTCTTGGTAC.....................
EV567420       --> ATTTTTTCACTAAGCAATATTCTTGGTACATTTTTTTTAGCAAAGATGTC

               1101   -   1151
UN16986        --> ATTATCTCATCACTCACATATCAAATTTGAAATTAAATTTTAACTAGGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441254       <-- ..................................................
FY439215       <-- A.................................................
EW727745       <-- ATTATCcc..........................................
EV545041       <-- ATTATCcc..........................................
EW739172       <-- ..................................................
EX775738       <-- ATTATCTCATC.......................................
EX891932       <-- ..................................................
EX752233       <-- ..................................................
EY894864       <-- ATTATCTCATCACTCACATATCAAATTTGAGATTAAATTTTAACTAGGTA
FD977706       <-- ..................................................
EV572367       <-- ATTATCTCATCACTCACATATCAAATTTGAAATTAAATTTTAACTAGG..
FD531620       <-- ATTATCcc..........................................
EX764527       --> ..................................................
EX748230       --> ..................................................
FD955528       --> ..................................................
FY430831       --> ..................................................
EX887896       --> ..................................................
EX771649       --> ..................................................
FD536091       --> ..................................................
EV549600       --> ..................................................
EW723410       --> ..................................................
FD982060       --> ..................................................
EV568241       --> ATTATCTCATCACTCATATATCAAATTTGAA...................
EV568369       --> ..................................................
EV567420       --> ATTATCTCATCACTCACATATCAAATTTGAAATTAAATTTTAACTAGG..

               1151   -   1201
UN16986        --> CC
                   ~~
FY441254       <-- ..
FY439215       <-- ..
EW727745       <-- ..
EV545041       <-- ..
EW739172       <-- ..
EX775738       <-- ..
EX891932       <-- ..
EX752233       <-- ..
EY894864       <-- CC
FD977706       <-- ..
EV572367       <-- ..
FD531620       <-- ..
EX764527       --> ..
EX748230       --> ..
FD955528       --> ..
FY430831       --> ..
EX887896       --> ..
EX771649       --> ..
FD536091       --> ..
EV549600       --> ..
EW723410       --> ..
FD982060       --> ..
EV568241       --> ..
EV568369       --> ..
EV567420       --> ..